# terms

id: PBO:0058158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4453","termid":"PBO:0058158"}


id: GO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0014808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"}


id: PR:P41891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gar2 gene.","definition_xrefs":["UniProtKB:P41891","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein gar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.02","synonyms":[{"name":"Spom972h-gar2","type":"exact"}],"termid":"PR:P41891"}


id: PBO:0067374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 475, pseudogene","termid":"PBO:0067374"}


id: PBO:0057310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517a","termid":"PBO:0057310"}


id: GO:0035118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"pectoral fin morphogenesis","termid":"GO:0035138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pectoral fin morphogenesis","termid":"GO:0035118"}


id: PBO:0076439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 12","termid":"PBO:0076439"}


id: FYPO:0004729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed by the extension of existing nuclear microtubules arising from fragmentation of the mitotic spindle. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule formation from nuclear microtubules","termid":"FYPO:0004727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules following mitotic spindle microtubule fragmentation","type":"exact"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation during vegetative growth","type":"exact"}],"termid":"FYPO:0004729"}


id: PBO:0066881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 181","termid":"PBO:0066881"}


id: PBO:0028670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Kms1_foci","termid":"PBO:0028670"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["GO_REF:0000058","PMID:22375062","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: PBO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 31","termid":"PBO:0072100"}


id: PBO:0002908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein","termid":"PBO:0002908"}


id: FYPO:0004196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated, has more than one septum and a nucleus that is broken into multiple small fragments, and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"},{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, elongated multiseptate cell","termid":"FYPO:0004076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0002403","FYPO:0005447","FYPO:0001320","FYPO:0000005","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, elongated multiseptate cell with fragmented nucleus","synonyms":[{"name":"inviable after spore germination, single or double cell division, elongated multiseptate cell with fragmented nuclear DNA","type":"related"},{"name":"inviable following spore germination, single or double cell division, elongated multiseptate cell with fragmented nucleus","type":"exact"},{"name":"inviable germinated spore, single or double cell division, elongated multiseptate cell with fragmented nucleus","type":"exact"},{"name":"lethal after spore germination, single or double cell division, elongated multiseptate cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004196"}


id: GO:0018748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.","definition_xrefs":["UM-BBD_reactionID:r0706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"iprodione amidohydrolase activity","termid":"GO:0018748"}


id: PBO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 5","termid":"PBO:0072116"}


id: PBO:0089329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase, Coq3 variant","termid":"PBO:0089329"}


id: PATO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A speed which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"speed","termid":"PATO:0000008"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased speed","synonyms":[{"name":"fast speed","type":"related"},{"name":"high speed","type":"exact"}],"termid":"PATO:0000303"}


id: PBO:0026925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026925"}


id: GO:1900451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"positively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glutamate receptor signaling pathway","synonyms":[{"name":"activation of glutamate receptor signaling pathway","type":"narrow"},{"name":"activation of glutamate signaling pathway","type":"exact"},{"name":"activation of glutamate signalling pathway","type":"exact"},{"name":"positive regulation of glutamate signaling pathway","type":"exact"},{"name":"positive regulation of glutamate signalling pathway","type":"exact"},{"name":"up regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up regulation of glutamate signaling pathway","type":"exact"},{"name":"up regulation of glutamate signalling pathway","type":"exact"},{"name":"up-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signalling pathway","type":"exact"},{"name":"upregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"upregulation of glutamate signaling pathway","type":"exact"},{"name":"upregulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900451"}


id: GO:0046013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell homeostatic proliferation","synonyms":[{"name":"regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046013"}


id: GO:0009504
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nascent cell membrane and cell wall structure that forms between two daughter nuclei near the center of a dividing plant cell. It develops at the equitorial region of the phragmoplast. It grows outwards to join with the lateral walls and form two daughter cells.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cell plate","secondary_identifiers":["Wikipedia:Cell_plate"],"termid":"GO:0009504"}


id: PBO:0017667
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"new inducer of mitosis","termid":"PBO:0017667"}


id: MOD:00472
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11746907","URL:http://dx.doi.org/10.1002/rcm.517","Unimod:94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMID d0","synonyms":[{"name":"IMID","type":"related"},{"name":"IMID d0","type":"related"}],"termid":"MOD:00472"}


id: PBO:0066552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 16","termid":"PBO:0066552"}


id: GO:0006878
data:
  {"annotated_genes":["SJAG_01694","SJAG_04403","SJAG_00802","SJAG_00668","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74083,89330,92475,96332,104045],"is_not":false,"summary":null,"term":"GO:0006878"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of copper ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"copper ion homeostasis","termid":"GO:0055070"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_00802":null,"SJAG_01694":null,"SJAG_02399":null,"SJAG_04403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular copper ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular copper ion homeostasis","type":"exact"},{"name":"copper homeostasis","type":"broad"}],"termid":"GO:0006878","terms_by_termid":{"GO:0006878":null}}


id: PBO:0090645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1","termid":"PBO:0090645"}


id: PBO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEK kinase (MEKK) Mkh1","termid":"PBO:0000485"}


id: PR:Q9P7V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec72 gene.","definition_xrefs":["UniProtKB:Q9P7V5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.01c","synonyms":[{"name":"Spom972h-sec72","type":"exact"}],"termid":"PR:Q9P7V5"}


id: PBO:0070367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 5","termid":"PBO:0070367"}


id: PBO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF assembly factor (CAF-1) complex subunit B, Pcf2","termid":"PBO:0002378"}


id: PBO:0035840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein-protein_interaction_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0035840"}


id: PBO:0078151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 29/delta variable 5","termid":"PBO:0078151"}


id: PBO:0078287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 20-1","termid":"PBO:0078287"}


id: PBO:0041565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 85","termid":"PBO:0041565"}


id: PBO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.2","termid":"PBO:0003807"}


id: PBO:0003565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2 (predicted)","termid":"PBO:0003565"}


id: GO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing electron carrier acting between cytochrome b(6)-f and P700 of photosystem I.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plastocyanin (obsolete GO:0015006)","synonyms":[{"name":"plastocyanin","type":"exact"}],"termid":"GO:0015006"}


id: PBO:0039722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3C","termid":"PBO:0039722"}


id: PR:Q9P3A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3A9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1565.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.05","synonyms":[{"name":"Spom972h-utp8","type":"exact"}],"termid":"PR:Q9P3A9"}


id: GO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cytidine, cytosine riboside, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cytidine transmembrane transporter activity","termid":"GO:0015212"}


id: PBO:0090543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor EF-1 alpha (eEF1A) methyltransferase Efm4","termid":"PBO:0090543"}


id: PBO:0070591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 57","termid":"PBO:0070591"}


id: FYPO:0005876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize tyrosine, and therefore requires tyrosine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for tyrosine","synonyms":[{"name":"growth auxotrophic for tyrosine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for tyrosine during vegetative growth","type":"exact"},{"name":"tyrosine auxotrophy","type":"exact"}],"termid":"FYPO:0005876"}


id: FYPO:0001507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular phosphatidylinositol level","synonyms":[{"name":"normal cellular PI level","type":"exact"},{"name":"normal cellular phosphatidylinositol accumulation","type":"related"},{"name":"normal cellular phosphatidylinositol level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylinositol level during vegetative growth","type":"exact"}],"termid":"FYPO:0001507"}


id: GO:0015466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An agent that can lyse the cell in which it is synthesized.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete autolysin activity (obsolete GO:0015466)","synonyms":[{"name":"autolysin activity","type":"exact"}],"termid":"GO:0015466"}


id: GO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of the immune system that executes a component of an immune response. An effector immune process takes place after its activation.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune effector process","termid":"GO:0002252"}


id: FYPO:0007703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:26443240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"abolished protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell side during glucose starvation","type":"related"},{"name":"abolished protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"abolished protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"protein localization to lateral cell cortex during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0007703"}


id: PBO:0084580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL003W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL004w","termid":"PBO:0084580"}


id: GO:0090517
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100028,106222],"is_not":false,"summary":null,"term":"GO:0090517"},{"annotations":[98988,100027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine transport","termid":"GO:0015819"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane import into vacuole","termid":"GO:0034490"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-lysine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090456"],"synonyms":[{"name":"lysine transmembrane import into vacuole","type":"broad"},{"name":"vacuolar lysine import","type":"broad"}],"termid":"GO:0090517","terms_by_termid":{"GO:0090517":null,"GO:1901482":null}}


id: PBO:0055430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2860","termid":"PBO:0055430"}


id: PATO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000522 herbicide sensitivity value (obsolete PATO:0000522)","termid":"PATO:0000522"}


id: PBO:0084517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm ZK616.6/EMC-4 and fly CG11137; mutation is functionally complemented by human EMC4","termid":"PBO:0084517"}


id: PBO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNS1/SUR4 family protein (predicted)","termid":"PBO:0000242"}


id: GO:0016323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"basal plasma membrane","termid":"GO:0009925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"basolateral plasma membrane","termid":"GO:0016323"}


id: PBO:0049270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like","termid":"PBO:0049270"}


id: PBO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of the Ras1-Byr2 signalling pathway, acting downstream of Ras1","termid":"PBO:0002027"}


id: PBO:0003887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase 1 protein Trt1","termid":"PBO:0003887"}


id: PBO:0049775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 2","termid":"PBO:0049775"}


id: PBO:0066197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM15 antisense RNA 1","termid":"PBO:0066197"}


id: PBO:0058144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4440","termid":"PBO:0058144"}


id: PBO:0038994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen dependent TFPI regulating protein","termid":"PBO:0038994"}


id: GO:0140632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inflammasome complex.","definition_xrefs":["PMID:33420033","PMID:33420028","PMID:33542150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0023052","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"canonical inflammasome complex assembly","termid":"GO:0140632"}


id: PBO:0081815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 8, Y-linked","termid":"PBO:0081815"}


id: FYPO:0001950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion determined to be sequestered in a cell is lower than normal.","definition_xrefs":["PMID:2145281","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased sequestered calcium level","synonyms":[{"name":"decreased cellular sequestered calcium level","type":"exact"},{"name":"decreased levels of sequestered calcium","type":"exact"},{"name":"decreased sequestered calcium ion level","type":"exact"},{"name":"decreased sequestered calcium level during mitotic cell cycle","type":"related"},{"name":"decreased sequestered calcium level during vegetative growth","type":"exact"},{"name":"reduced sequestered calcium level","type":"exact"}],"termid":"FYPO:0001950"}


id: PATO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's involvement of only one part or side.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral","termid":"PATO:0000634"}


id: GO:0032896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + AH2 + O2 = palmitoleic acid (16:1delta9) + A + 2 H2O.","definition_xrefs":["GOC:kmv","PMID:16443825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"palmitoyl-CoA 9-desaturase activity","synonyms":[{"name":"palmitoyl-CoA delta9-desaturase acitivity","type":"exact"}],"termid":"GO:0032896"}


id: FYPO:0007942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin  loop  formation  during meiotic prophase I results in  chromatin loops of increased length.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin loop formation during meiotic prophase I","termid":"FYPO:0007944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased length of chromatin loops during meiotic prophase I","termid":"FYPO:0007942"}


id: PBO:0081627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 557","termid":"PBO:0081627"}


id: GO:0008010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a larva. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of chitin-based larval cuticle","synonyms":[{"name":"structural constituent of larval cuticle","type":"broad"}],"termid":"GO:0008010"}


id: PBO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030673"}


id: SO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primary transcript region bordering trans-splice junction.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_site","synonyms":[{"name":"trans splice site","type":"exact"}],"termid":"SO:0001420"}


id: PBO:0072887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 2","termid":"PBO:0072887"}


id: PBO:0069947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1240, pseudogene","termid":"PBO:0069947"}


id: PBO:0078736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase O","termid":"PBO:0078736"}


id: PR:O74493
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside permease C285.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.05","synonyms":[{"name":"Spom972h-SPCC285.05","type":"exact"}],"termid":"PR:O74493"}


id: GO:1904480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intestinal absorption.","definition_xrefs":["GOC:rl","PMID:12469120","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"positively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal absorption","synonyms":[{"name":"activation of intestinal absorption","type":"narrow"},{"name":"up regulation of intestinal absorption","type":"exact"},{"name":"up-regulation of intestinal absorption","type":"exact"},{"name":"upregulation of intestinal absorption","type":"exact"}],"termid":"GO:1904480"}


id: GO:0019655
data:
  {"annotated_genes":["SJAG_00240","SJAG_01414","SJAG_03743","SJAG_05006","SJAG_03822","SJAG_03370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84752,94915,94916,110797,110798],"is_not":false,"summary":null,"term":"GO:0019655"},{"annotations":[92775],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose; it is converted into ethanol and carbon dioxide (CO2), producing two molecules of ATP for each molecule of glucose.","definition_xrefs":["GOC:nr","ISBN:0716720094","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Ethanol_fermentation","GO:0043458"],"synonyms":[{"name":"alcoholic fermentation","type":"related"},{"name":"ethanol anabolism during fermentation","type":"related"},{"name":"ethanol biosynthetic process involved in glucose fermentation to ethanol","type":"related"},{"name":"ethanol fermentation","type":"exact"},{"name":"ethanol formation during fermentation","type":"related"},{"name":"ethanol synthesis during fermentation","type":"related"},{"name":"glucose catabolic process to ethanol","type":"exact"},{"name":"glucose fermentation to ethanol","type":"exact"}],"termid":"GO:0019655","terms_by_termid":{"GO:0019655":null,"GO:2001172":null}}


id: GO:0035652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between the cytoplasmic coat proteins on clathrin-coated vesicles and proteins and/or lipoproteins that are going to be transported by a vesicle.","definition_xrefs":["GOC:lb","PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cargo loading","termid":"GO:0035459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading","synonyms":[{"name":"cargo loading into clathrin-coated vesicle","type":"exact"}],"termid":"GO:0035652"}


id: PR:O42998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A HEAT repeat-containing protein 5B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof6 interactor protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.08","secondary_identifiers":["UniProtKB:O42998"],"synonyms":[{"name":"Spom972h-HEATR5B","type":"exact"}],"termid":"PR:O42998"}


id: PATO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having the shape of a kidney.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reniform","synonyms":[{"name":"bean shaped","type":"related"},{"name":"kidney-shaped","type":"exact"}],"termid":"PATO:0001871"}


id: PBO:0056323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 6","termid":"PBO:0056323"}


id: PR:C6Y4C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.14","synonyms":[{"name":"Spom972h-spo2","type":"exact"}],"termid":"PR:C6Y4C2"}


id: PBO:0048034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 1 like","termid":"PBO:0048034"}


id: PBO:0083607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential HSF1 gene encoding heat shock transcription factor","termid":"PBO:0083607"}


id: GO:0070250
data:
  {"annotated_genes":["SJAG_02989","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84389,95163],"is_not":false,"summary":null,"term":"GO:0070250"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a mating projection, the projection formed by unicellular fungi in response to mating pheromone.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01978":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"mating projection membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"shmoo membrane","type":"narrow"}],"termid":"GO:0070250","terms_by_termid":{"GO:0070250":null}}


id: PBO:0058296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4670","termid":"PBO:0058296"}


id: PBO:0034509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_mitotic_interphase","termid":"PBO:0034509"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: GO:0019815
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is present in the plasma membrane of B cells and that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"B cell receptor complex","secondary_identifiers":["GO:0042570"],"synonyms":[{"name":"B cell receptor accessory molecule complex","type":"related"},{"name":"B lymphocyte receptor complex","type":"exact"},{"name":"B-cell receptor complex","type":"exact"},{"name":"B-lymphocyte receptor complex","type":"exact"},{"name":"BCR complex","type":"exact"},{"name":"antibody","type":"related"},{"name":"immunoglobulin complex, membrane bound","type":"exact"}],"termid":"GO:0019815"}


id: FYPO:0004747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cortical patches at one or both cell tips than normal during early mitosis (before anaphase).","definition_xrefs":["PMID:25688133","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"actin cortical patches present in increased numbers at cell tip during early mitosis","synonyms":[{"name":"F-actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"accumulation of actin cortical patches at cell tip during early mitosis","type":"related"},{"name":"actin cortical patches in increased numbers at cell tip during early mitosis during vegetative growth","type":"exact"},{"name":"actin cortical patches present in greater numbers at cell tip during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell end during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during cell growth during early mitotic nuclear division","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during early mitosis during mitotic cell cycle","type":"related"},{"name":"actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"additional actin cortical patches present at cell tip during early mitosis","type":"exact"},{"name":"extra actin cortical patches at cell tip during early mitosis","type":"exact"},{"name":"increased number of actin patches at cell tip in early mitosis","type":"exact"}],"termid":"FYPO:0004747"}


id: GO:0061735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A positive regulation of the macromitophagy pathway that is triggered by mitochondrial depolarization and requires the function of a DNM1L-family molecule.","definition_xrefs":["PMID:25349190","GOC:autophagy","GOC:dph","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitophagy in response to mitochondrial depolarization","termid":"GO:0098779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"DNM1L-mediated stimulation of mitophagy in response to mitochondrial depolarization","synonyms":[{"name":"dynamin-like protein-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:0061735"}


id: PBO:0005788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf24","termid":"PBO:0005788"}


id: PBO:0055194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2619","termid":"PBO:0055194"}


id: FYPO:0002308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal IMP binding","termid":"FYPO:0002308"}


id: GO:1903727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:10657240","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"positively_regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phospholipid metabolic process","synonyms":[{"name":"activation of phospholipid metabolic process","type":"narrow"},{"name":"activation of phospholipid metabolism","type":"narrow"},{"name":"positive regulation of phospholipid metabolism","type":"exact"},{"name":"up regulation of phospholipid metabolic process","type":"exact"},{"name":"up regulation of phospholipid metabolism","type":"exact"},{"name":"up-regulation of phospholipid metabolic process","type":"exact"},{"name":"up-regulation of phospholipid metabolism","type":"exact"},{"name":"upregulation of phospholipid metabolic process","type":"exact"},{"name":"upregulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903727"}


id: GO:0086093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signalling pathway involved in heart process","type":"exact"},{"name":"M2 receptor signaling pathway involved in heart process","type":"narrow"},{"name":"muscarinic receptor signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086093"}


id: PBO:0058419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4788","termid":"PBO:0058419"}


id: PBO:0086249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that mediates sphingolipid homeostasis; evolutionarily conserved, required for resistance to agents that induce unfolded protein response; Orm1p and Orm2p together control membrane biogenesis by coordinating lipid homeostasis with protein quality control; protein abundance increases in response to DNA replication stress; ORM2 has a paralog, ORM1, that arose from the whole genome duplication","termid":"PBO:0086249"}


id: PBO:0064658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A","termid":"PBO:0064658"}


id: GO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + NADP+ + glyceraldehyde-3-phosphate = NADPH + 3-phospho-D-glyceroyl-phosphate.","definition_xrefs":["EC:1.2.1.13","MetaCyc:1.2.1.13-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity","termid":"GO:0043891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity","secondary_identifiers":["RHEA:10296"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"NADP-dependent glyceraldehyde phosphate dehydrogenase activity","type":"related"},{"name":"NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"NADP-triose phosphate dehydrogenase activity","type":"related"},{"name":"dehydrogenase, glyceraldehyde phosphate (nicotinamide adenine dinucleotide phosphate) (phosphorylating)","type":"related"},{"name":"glyceraldehyde phosphate dehydrogenase (nicotinamide adenine dinucleotide phosphate) (phosphorylating)","type":"related"},{"name":"triosephosphate dehydrogenase (NADP(+)) activity","type":"related"},{"name":"triosephosphate dehydrogenase (NADP)","type":"related"},{"name":"triosephosphate dehydrogenase (NADP+) activity","type":"related"}],"termid":"GO:0047100"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: PBO:0070863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 1","termid":"PBO:0070863"}


id: GO:0016631
data:
  {"annotated_genes":["SJAG_04107","SJAG_02717","SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107514],"is_not":false,"summary":null,"term":"GO:0016631"},{"annotations":[96925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[91208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + NAD(P)+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NAD(P)H + H+.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02007":null,"SJAG_02717":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN1G-3256","MetaCyc:RXN1G-2527","MetaCyc:RXN1G-3613","MetaCyc:RXN1G-3993","MetaCyc:RXN1G-4140","MetaCyc:RXN1G-3232","MetaCyc:RXN1G-3641","Wikipedia:Enoyl-acyl_carrier_protein_reductase","MetaCyc:RXN1G-2544","MetaCyc:RXN1G-3667","MetaCyc:RXN1G-45"],"synonyms":[{"name":"enoyl-ACP reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier protein] reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier-protein] reductase activity","type":"broad"},{"name":"enoyl-acyl carrier protein reductase","type":"exact"}],"termid":"GO:0016631","terms_by_termid":{"GO:0004318":null,"GO:0016631":null,"GO:0141148":null}}


id: PBO:0080396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 endosomal protein sorting factor C","termid":"PBO:0080396"}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115597],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0046975
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[91687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 36) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 36). This reaction is the addition of a methyl group to the lysine residue at position 36 of the histone H3 protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0008276","GO:0016741","GO:0016740","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3K36 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3K36 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone methylase activity (H3-K36 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone-H3K36 methyltransferase activity","type":"exact"}],"termid":"GO:0046975","terms_by_termid":{"GO:0140954":null,"GO:0140955":null}}


id: PBO:0074528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C4","termid":"PBO:0074528"}


id: PBO:0076636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 3","termid":"PBO:0076636"}


id: PBO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pab2 associates with polyadenylated snoRNAs near the polyadenylation site","termid":"PBO:0017010"}


id: GO:0023052
data:
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id: GO:0042712
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id: PBO:0057816
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id: PBO:0036556
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id: GO:1900203
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id: PBO:0030783
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id: PBO:0056265
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id: PBO:0089920
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id: GO:0050153
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id: PBO:0058091
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id: GO:0044816
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id: PBO:0058320
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id: GO:2001109
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id: GO:0140590
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id: PBO:0068233
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 4","termid":"PBO:0068233"}


id: PBO:0085505
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; nascent Rps3p is bound by specific chaperone Yar1p during translation; homologous to mammalian ribosomal protein S3 and bacterial S3","termid":"PBO:0085505"}


id: GO:0106364
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id: PBO:0062330
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id: PBO:0000743
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id: GO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimonite transmembrane transporter activity","termid":"GO:0015104"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"antimonite secondary active transmembrane transporter activity","synonyms":[{"name":"antimonite porter activity","type":"related"}],"termid":"GO:0042960"}


id: PBO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 8","termid":"PBO:0052142"}


id: PBO:0052041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction plakoglobin","termid":"PBO:0052041"}


id: GO:1905448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["PMID:23707074","GO_REF:0000058","GOC:bc","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled electron transport","termid":"GO:1905446"},{"relation_name":"positively_regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"activation of mitochondrial ATP synthesis coupled electron transport","type":"narrow"},{"name":"up regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"up-regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"upregulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"}],"termid":"GO:1905448"}


id: GO:1905698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of polysome binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:18426977","GOC:bc","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of polysome binding (obsolete GO:1905698)","synonyms":[{"name":"activation of polyribosome binding","type":"narrow"},{"name":"activation of polysome binding","type":"narrow"},{"name":"positive regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polysome binding","type":"exact"},{"name":"up-regulation of polyribosome binding","type":"exact"},{"name":"up-regulation of polysome binding","type":"exact"},{"name":"upregulation of polyribosome binding","type":"exact"},{"name":"upregulation of polysome binding","type":"exact"}],"termid":"GO:1905698"}


id: GO:0004421
data:
  {"annotated_genes":["SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94241],"is_not":false,"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetyl-CoA + acetyl-CoA + H2O = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA + H+.","definition_xrefs":["RHEA:10188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191323","KEGG_REACTION:R01978","MetaCyc:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN","EC:2.3.3.10","Reactome:R-HSA-73918"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA-acetylating)","type":"related"},{"name":"(s)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA- acetylating) activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-coenzyme A synthase activity","type":"related"},{"name":"HMG-CoA synthase activity","type":"related"},{"name":"acetoacetyl coenzyme A transacetase activity","type":"related"},{"name":"acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-condensing enzyme","type":"related"},{"name":"hydroxymethylglutaryl coenzyme alpha-condensing enzyme activity","type":"related"}],"termid":"GO:0004421","terms_by_termid":{"GO:0004421":null}}


id: PBO:0079603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F-SCLY readthrough (NMD candidate)","termid":"PBO:0079603"}


id: PBO:0039966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 9","termid":"PBO:0039966"}


id: PBO:0067538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 683, pseudogene","termid":"PBO:0067538"}


id: GO:0045575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a basophil resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the basophil has specifically bound via IgE bound to Fc-epsilonRI receptors.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte activation","termid":"GO:0036230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil activation","secondary_identifiers":["Wikipedia:Basophil_activation"],"termid":"GO:0045575"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0058565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6507","termid":"PBO:0058565"}


id: PBO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6","termid":"PBO:0060802"}


id: FYPO:0004333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during cellular response to oxidative stress","termid":"FYPO:0003692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"increased protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"increased protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0004333"}


id: PBO:0031316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_process_phenotype","termid":"PBO:0031316"}


id: GO:1905368
data:
  {"annotated_genes":["SJAG_00778","SJAG_04306","SJAG_03638","SJAG_04144","SJAG_05278","SJAG_02773","SJAG_02927","SJAG_00808","SJAG_04613","SJAG_00584","SJAG_02341","SJAG_03292","SJAG_03668","SJAG_04274","SJAG_02066","SJAG_02542","SJAG_03737","SJAG_04969","SJAG_02776","SJAG_01489","SJAG_00738","SJAG_00641","SJAG_02867","SJAG_03776","SJAG_04357","SJAG_03672","SJAG_01131","SJAG_01014","SJAG_04484","SJAG_02562","SJAG_03752","SJAG_01475","SJAG_02502","SJAG_00766","SJAG_00184","SJAG_00128","SJAG_00846","SJAG_04572","SJAG_04088","SJAG_02900","SJAG_01544","SJAG_04888","SJAG_04229","SJAG_04541","SJAG_04211","SJAG_03151","SJAG_01203","SJAG_02541","SJAG_02992","SJAG_01750","SJAG_04205","SJAG_00460","SJAG_01652","SJAG_03408","SJAG_00712","SJAG_03321","SJAG_00762","SJAG_05316","SJAG_01179","SJAG_00087","SJAG_02458","SJAG_01658","SJAG_03599","SJAG_01711","SJAG_03261","SJAG_04477"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031597"},{"annotations":[87598,83689,88428,110137,99897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[107185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005745"},{"annotations":[97835,106528,85091,109234,92594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000502"},{"annotations":[95927,107586,84759,98069,92661,110824,111742],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[92422,113985,89550,90204,93902,107345,106916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"},{"annotations":[106439,109235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005838"},{"annotations":[101515,113577,106440,92946,100258,103260,95133,111365,109236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[105508,85092,90355,93296,100532,94993,95134,92595,97836,98288,111335,111443,107419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"},{"annotations":[113713,103875,103516,113761,94697,84737,109170,94017,85511,87611,110489,112464,84590,103084,101947,111557,107942,108744,99552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[113723,99464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990520"},{"annotations":[83899,94615,100006,108752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of peptidase activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000088","PMID:1689240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00128":null,"SJAG_00184":null,"SJAG_00460":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_00846":null,"SJAG_01014":null,"SJAG_01131":null,"SJAG_01179":null,"SJAG_01203":null,"SJAG_01475":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01750":null,"SJAG_02066":null,"SJAG_02341":null,"SJAG_02458":null,"SJAG_02502":null,"SJAG_02541":null,"SJAG_02542":null,"SJAG_02562":null,"SJAG_02773":null,"SJAG_02776":null,"SJAG_02867":null,"SJAG_02900":null,"SJAG_02927":null,"SJAG_02992":null,"SJAG_03151":null,"SJAG_03261":null,"SJAG_03292":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03599":null,"SJAG_03638":null,"SJAG_03668":null,"SJAG_03672":null,"SJAG_03737":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04205":null,"SJAG_04211":null,"SJAG_04229":null,"SJAG_04274":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04541":null,"SJAG_04572":null,"SJAG_04613":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05278":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protease complex","type":"exact"},{"name":"tryptase complex","type":"narrow"}],"termid":"GO:1905368","terms_by_termid":{"GO:0000124":null,"GO:0000502":null,"GO:0005745":null,"GO:0005787":null,"GO:0005838":null,"GO:0008540":null,"GO:0008541":null,"GO:0019773":null,"GO:0019774":null,"GO:0031597":null,"GO:0042765":null,"GO:1990520":null}}


id: MOD:00285
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an aspartic acid residue, a glutamic acid residue, a methionine residue (forming a sulfonium ether), and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0280","PubMed:10447690","PubMed:10480885","PubMed:7840679","PubMed:1320128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-methionine residue","termid":"MOD:02071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyheme-L-aspartate ester-L-glutamate ester-L-methionine sulfonium","synonyms":[{"name":"1,5-bishydroxymethyl protoporphyrin IX 1-glutamate ester 5-aspartate ester 2-methionine sulfonium","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"[13-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-3-[(S)-(3-amino-3-carboxy)propanoyloxymethyl]-12-[(S)-(3-amino-3-carboxy)propylsulfoniumethyl]-7-ethenyl-8,17-dimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"dihydroxyheme-L-aspartate ester-L-glutamate ester-L-methionine sulfonium","type":"exact"},{"name":"myeloperoxidase heme cofactor","type":"exact"}],"termid":"MOD:00285"}


id: GO:0033765
data:
  {"annotated_genes":["SJAG_04954","SJAG_02291"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96185,96844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor, and in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity","termid":"GO:0016229"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02291":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033765","terms_by_termid":{"GO:0003865":null}}


id: PBO:0071816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 11","termid":"PBO:0071816"}


id: PBO:0053503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 486","termid":"PBO:0053503"}


id: PBO:0054047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1388","termid":"PBO:0054047"}


id: GO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:cjm","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process","synonyms":[{"name":"excretory system process","type":"exact"},{"name":"kidney system process","type":"related"}],"termid":"GO:0003014"}


id: GO:0072449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle G1/S transition size control checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell size control checkpoint signaling","termid":"GO:0072470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G1 cell size control checkpoint signaling","synonyms":[{"name":"mitotic cell cycle G1/S transition size control checkpoint effector process","type":"exact"},{"name":"response to signal involved in mitotic cell cycle G1/S transition size control checkpoint","type":"exact"}],"termid":"GO:0072449"}


id: GO:0042316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system. Penicillins are produced naturally during the growth of various microfungi of the genera Penicillium and Aspergillus.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"penicillin metabolic process","synonyms":[{"name":"penicillin metabolism","type":"exact"}],"termid":"GO:0042316"}


id: GO:0071015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the cooperative binding of the heterodimeric U11/U12 snRNP to the 5' splice site and the branch point sequence. The U12-type prespliceosome includes many proteins in addition to those found in the U11/U12 heterodimeric snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation.","definition_xrefs":["GOC:krc","GOC:mah","GOC:ab","PMID:10197985","PMID:16201866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"prespliceosome","termid":"GO:0071010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U12-type prespliceosome","synonyms":[{"name":"AT-AC prespliceosome","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex A","type":"narrow"},{"name":"minor prespliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex B","type":"narrow"}],"termid":"GO:0071015"}


id: GO:0045477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","PMID:11973306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nurse cell apoptotic process","synonyms":[{"name":"regulation of nurse cell apoptosis","type":"narrow"}],"termid":"GO:0045477"}


id: GO:0061002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of dendritic spine development","termid":"GO:0061000"},{"relation_name":"is_a","term_name":"regulation of dendritic spine morphogenesis","termid":"GO:0061001"},{"relation_name":"negatively_regulates","term_name":"dendritic spine morphogenesis","termid":"GO:0060997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine morphogenesis","termid":"GO:0061002"}


id: GO:0093002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nematicide stimulus. Nematicides are chemicals used to kill nematodes.","definition_xrefs":["GOC:kvm","PMID:22301316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nematicide","synonyms":[{"name":"response to antihelmintic","type":"exact"},{"name":"response to nematocide","type":"exact"}],"termid":"GO:0093002"}


id: PBO:0067821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 123","termid":"PBO:0067821"}


id: GO:2000116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity","synonyms":[{"name":"regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2000116"}


id: GO:1990566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inward rectifier potassium channel complex expressed in cardiac muscle, specifically the sinoatrial node and atria, where it controls the heart rate, via regulation by G protein-coupled receptor signaling. In mammals it is composed of GIRK1 (or Kir3.1) and GIRK4 (or Kir3.4) subunits.","definition_xrefs":["PMID:9765280","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"I(KACh) inward rectifier potassium channel complex","synonyms":[{"name":"GIRK1-GIRK4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"Kir3.1-Kir3.4 G protein-coupled atrial inward rectifier potassium channel complex","type":"related"},{"name":"muscarinic potassium channel complex","type":"related"}],"termid":"GO:1990566"}


id: GO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which orthodenticle mRNA is transported to and maintained in the oocyte and/or syncytial embryo as part of the process that will specify the anterior/posterior axis.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"orthodenticle mRNA localization","synonyms":[{"name":"orthodenticle mRNA localisation","type":"exact"}],"termid":"GO:0060812"}


id: GO:0051234
data:
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id: GO:0036318
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id: GO:0006748
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id: GO:0141101
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id: PR:Q9P7D1
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id: PBO:0075128
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id: PBO:0078875
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id: PBO:0059309
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51","termid":"PBO:0059309"}


id: GO:0070338
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id: GO:0035129
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id: FYECO:0000373
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiolutin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiolutin","termid":"FYECO:0000373"}


id: GO:0002856
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id: PBO:0060549
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id: PR:O14161
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id: GO:0017194
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id: GO:1901594
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id: PBO:0066312
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id: GO:0052095
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id: GO:0005975
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id: PATO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased curvature","termid":"PATO:0001592"}


id: PBO:0085598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcium homeostasis and exit from quiescence; required for proper trehalose levels during quiescence; may play a role in cell wall biosynthesis, mutants are hypersensitive to antifungal, Papulacandin B; null mutants have increased plasmid loss; interacts with Pdr5p","termid":"PBO:0085598"}


id: GO:1902662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["PMID:23444136","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902662"}


id: GO:0014720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within tonic skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The tonic skeletal muscle is characterized by long lasting contractile responses and high resistance to fatigue.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tonic skeletal muscle contraction","termid":"GO:0014720"}


id: PR:Q10415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermediate peptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00249","PANTHER:PTHR11804:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.10c","secondary_identifiers":["UniProtKB:Q10415"],"synonyms":[{"name":"MIP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MIPEP","type":"exact"},{"name":"octapeptidyl aminopeptidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10415"}


id: PBO:0056722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha pseudogene 4","termid":"PBO:0056722"}


id: SO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that 1) when located between a CRM and a gene's promoter prevents the CRM from modulating that genes expression and 2) acts as a chromatin boundary element or barrier that can block the encroachment of condensed chromatin from an adjacent region.","definition_xrefs":["PMID:12154228","SO:regcreative","NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator","secondary_identifiers":["http://en.wikipedia.org/wiki/Insulator_(genetics)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:insulator","type":"exact"},{"name":"insulator element","type":"exact"}],"termid":"SO:0000627"}


id: PBO:0045609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 20 (pseudogene)","termid":"PBO:0045609"}


id: MOD:01381
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoleyl-L-serine.","definition_xrefs":["PubMed:17141155","RESID:AA0455","OMSSA:186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoleylated residue","termid":"MOD:01768"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoleyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-((9Z)-9-hexadecenoyloxy)propanoic acid","type":"exact"},{"name":"L-serine cis-9-hexadecenoate ester","type":"exact"},{"name":"LIPID O-palmitoleyl serine","type":"exact"},{"name":"O-palmitoleyl-L-serine","type":"exact"},{"name":"O3-palmitoleyl-serine","type":"exact"},{"name":"mod186","type":"exact"}],"termid":"MOD:01381"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: GO:0043843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate.","definition_xrefs":["EC:2.7.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"ADP-specific glucokinase activity","secondary_identifiers":["Reactome:R-HSA-5696021","RHEA:11460"],"synonyms":[{"name":"ADP-dependent glucokinase activity","type":"related"},{"name":"ADP:D-glucose 6-phosphotransferase activity","type":"related"}],"termid":"GO:0043843"}


id: PBO:0064760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase D","termid":"PBO:0064760"}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: PR:O59763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oca2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase oca2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.10","synonyms":[{"name":"Spom972h-oca2","type":"exact"}],"termid":"PR:O59763"}


id: PBO:0069907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1198, pseudogene","termid":"PBO:0069907"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: PBO:0052951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 2","termid":"PBO:0052951"}


id: PBO:0111313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II 3' end processing-associated factor","termid":"PBO:0111313"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: FYPO:0007156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is increased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to medial cortex during vegetative growth","termid":"FYPO:0001677"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to medial cortical node","synonyms":[{"name":"increased protein localisation to medial cortical node","type":"exact"},{"name":"increased protein localization to cytokinetic nodes","type":"related"},{"name":"increased protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"increased protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"increased protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0007156"}


id: PBO:0041038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated ATM activator 1","termid":"PBO:0041038"}


id: FYPO:0006130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or more microtubules does not occur during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to microtubule during meiosis","synonyms":[{"name":"abolished protein localisation to microtubule during meiosis","type":"exact"},{"name":"abolished protein localization to microtubule during meiotic nuclear division","type":"exact"},{"name":"protein absent from microtubule during meiosis","type":"related"},{"name":"protein localization to microtubule abolished during meiosis","type":"exact"}],"termid":"FYPO:0006130"}


id: PBO:0003025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght7 (predicted)","termid":"PBO:0003025"}


id: GO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont causes the formation of a mass of cells in a host organism. While these growths are often called nodules, they are not formed as nitrogen-fixing structures, but rather to provide an environment for the symbiont to grow. In this sense they are parasitic structures rather than mutualistic.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction by symbiont of tumor or growth in host","secondary_identifiers":["GO:0044005","GO:0044006","GO:0051820"],"synonyms":[{"name":"induction by symbiont in host of tumor, nodule, or growth","type":"related"},{"name":"induction by symbiont in host of tumor, nodule, or growth containing transformed cells","type":"related"},{"name":"induction by symbiont of nodulation, tumor or growth in host","type":"related"},{"name":"induction of tumor, nodule, or growth containing transformed cells in other organism during symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth containing transformed cells in other organism involved in symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth in other organism during symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0051819"}


id: PBO:0085728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation","termid":"PBO:0085728"}


id: GO:0048941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the posterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell differentiation","termid":"GO:0048931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}


id: PBO:0089266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MutS protein Msh1","termid":"PBO:0089266"}


id: GO:0070076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the removal of a methyl group from a lysine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone lysine demethylation (obsolete GO:0070076)","termid":"GO:0070076"}


id: FYPO:0006289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phytoceramide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phytoceramide level","synonyms":[{"name":"increased cellular phytoceramide level during mitotic cell cycle","type":"related"},{"name":"increased cellular phytoceramide level during vegetative growth","type":"exact"},{"name":"increased phytoceramide accumulation","type":"related"}],"termid":"FYPO:0006289"}


id: GO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane attack complex protein alphaM chain (obsolete GO:0005580)","synonyms":[{"name":"membrane attack complex protein alphaM chain","type":"exact"}],"termid":"GO:0005580"}


id: GO:1905313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transforming growth factor beta receptor signaling pathway that is involved in heart development.","definition_xrefs":["PMID:16140292","GO_REF:0000060","GOC:BHF","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in heart development (obsolete GO:1905313)","synonyms":[{"name":"TGF-beta receptor signaling pathway involved in cardiac development","type":"related"},{"name":"TGF-beta receptor signaling pathway involved in dorsal vessel development","type":"narrow"},{"name":"TGF-beta receptor signaling pathway involved in heart development","type":"exact"},{"name":"TGF-beta receptor signalling pathway involved in cardiac development","type":"related"},{"name":"TGF-beta receptor signalling pathway involved in dorsal vessel development","type":"narrow"},{"name":"TGF-beta receptor signalling pathway involved in heart development","type":"exact"},{"name":"TGFbeta receptor signaling pathway involved in cardiac development","type":"related"},{"name":"TGFbeta receptor signaling pathway involved in dorsal vessel development","type":"narrow"},{"name":"TGFbeta receptor signaling pathway involved in heart development","type":"exact"},{"name":"TGFbeta receptor signalling pathway involved in cardiac development","type":"related"},{"name":"TGFbeta receptor signalling pathway involved in dorsal vessel development","type":"narrow"},{"name":"TGFbeta receptor signalling pathway involved in heart development","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway involved in cardiac development","type":"related"},{"name":"transforming growth factor beta receptor signaling pathway involved in dorsal vessel development","type":"narrow"},{"name":"transforming growth factor beta receptor signalling pathway involved in cardiac development","type":"related"},{"name":"transforming growth factor beta receptor signalling pathway involved in dorsal vessel development","type":"narrow"},{"name":"transforming growth factor beta receptor signalling pathway involved in heart development","type":"exact"}],"termid":"GO:1905313"}


id: GO:0034983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine deacetylation","synonyms":[{"name":"protein lysine acetylation","type":"related"}],"termid":"GO:0034983"}


id: GO:0120075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"positively_regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion cell differentiation","termid":"GO:0120075"}


id: GO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"lipase activator activity","termid":"GO:0060229"}


id: GO:2000115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of bipolar cell polarity regulating in cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000115"}


id: PBO:0065883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33A, member RAS oncogene family","termid":"PBO:0065883"}


id: MOD:01714
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01714"}


id: PBO:0063125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 10","termid":"PBO:0063125"}


id: GO:0099548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}


id: PATO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001118 momentum value (obsolete PATO:0001118)","termid":"PATO:0001118"}


id: GO:0015001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete high-potential iron-sulfur carrier (obsolete GO:0015001)","synonyms":[{"name":"HiPIP","type":"related"},{"name":"high-potential iron-sulfur carrier","type":"exact"},{"name":"high-potential iron-sulphur carrier","type":"exact"}],"termid":"GO:0015001"}


id: PR:O13955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vam6/Vps39-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00636","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.14","secondary_identifiers":["UniProtKB:O13955"],"synonyms":[{"name":"Spom972h-VPS39","type":"exact"},{"name":"vacuolar protein sorting-associated protein 39 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13955"}


id: GO:0047592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-pyridoxate + NADPH + O2 = 2-(acetamidomethylene)-3-(hydroxymethyl)succinate) + NADP+.","definition_xrefs":["RHEA:11152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-pyridoxate dioxygenase activity","secondary_identifiers":["EC:1.14.13.241","MetaCyc:5-PYRIDOXATE-DIOXYGENASE-RXN","KEGG_REACTION:R04570"],"synonyms":[{"name":"5-pyridoxate oxidase activity","type":"related"}],"termid":"GO:0047592"}


id: PBO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga5","termid":"PBO:0036438"}


id: PBO:0085522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24B has a paralog, RPS24A, that arose from the whole genome duplication","termid":"PBO:0085522"}


id: GO:1903976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:19100238","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"negatively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell migration","synonyms":[{"name":"down regulation of glia cell migration","type":"exact"},{"name":"down regulation of glial cell migration","type":"exact"},{"name":"down-regulation of glia cell migration","type":"exact"},{"name":"down-regulation of glial cell migration","type":"exact"},{"name":"downregulation of glia cell migration","type":"exact"},{"name":"downregulation of glial cell migration","type":"exact"},{"name":"inhibition of glia cell migration","type":"narrow"},{"name":"inhibition of glial cell migration","type":"narrow"},{"name":"negative regulation of glia cell migration","type":"exact"}],"termid":"GO:1903976"}


id: GO:0008308
data:
  {"annotated_genes":["SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85723],"is_not":false,"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated monoatomic anion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9012374","GO:0022844"],"synonyms":[{"name":"voltage-dependent ion-selective channel activity","type":"related"},{"name":"voltage-gated anion channel activity","type":"broad"},{"name":"voltage-gated ion-selective channel activity","type":"related"}],"termid":"GO:0008308","terms_by_termid":{"GO:0008308":null}}


id: PBO:0059368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18C","termid":"PBO:0059368"}


id: GO:0033802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoliquiritigenin = 2'-O-methylisoliquiritigenin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:21608","EC:2.1.1.154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"isoliquiritigenin 2'-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07242","MetaCyc:RXN-3501"],"synonyms":[{"name":"CHMT","type":"related"},{"name":"S-adenosyl-L-methionine:isoliquiritigenin 2'-O-methyltransferase activity","type":"related"},{"name":"chalcone OMT","type":"related"}],"termid":"GO:0033802"}


id: GO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splicing of Group III introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group III introns, that is involved in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions begun by a bulged adenosine residue within the intron sequence as the initiating nucleophile. The intron is excised as a lariat. Though very similar in structure and mechanism to Group II introns, Group III introns are smaller and more streamlined and the splice site consensus sequences are not as well conserved.","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Group III intron splicing","synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000374"}


id: PBO:0029378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_G0","termid":"PBO:0029378"}


id: GO:0003797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antibacterial peptide activity (obsolete GO:0003797)","synonyms":[{"name":"antibacterial peptide activity","type":"exact"}],"termid":"GO:0003797"}


id: GO:0046310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of 1,3-dichloro-2-propanol (DCP), a halohydrin suspected of being carcinogenic, mutagenic and genotoxic.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3-dichloro-2-propanol catabolic process (obsolete GO:0046310)","synonyms":[{"name":"1,3-dichloro-2-propanol breakdown","type":"exact"},{"name":"1,3-dichloro-2-propanol catabolism","type":"exact"},{"name":"1,3-dichloro-2-propanol degradation","type":"exact"}],"termid":"GO:0046310"}


id: PBO:0005660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Spp27","termid":"PBO:0005660"}


id: GO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of septins and associated proteins to form a tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring assembly","termid":"GO:0000921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}


id: PBO:0038390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_severity","termid":"PBO:0038390"}


id: PBO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 195","termid":"PBO:0042122"}


id: GO:0035423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity involved in innate immune response (obsolete GO:0035423)","termid":"GO:0035423"}


id: FYPO:0005518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in regions containing protein coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at protein coding gene during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005518"}


id: PBO:0043247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 7","termid":"PBO:0043247"}


id: GO:0006623
data:
  {"annotated_genes":["SJAG_03970","SJAG_00181","SJAG_00208","SJAG_04552","SJAG_01981","SJAG_03250","SJAG_00204","SJAG_05210","SJAG_00108","SJAG_03385","SJAG_01360","SJAG_01229","SJAG_01088","SJAG_03976","SJAG_01488","SJAG_16459","SJAG_00380","SJAG_01281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85143,86410,88320,93598,97304,98318,100234,100254,102926],"is_not":false,"summary":null,"term":"GO:0006623"},{"annotations":[84261,84375,109502,87279,84339,110632,87701,87835,101933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole, usually using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"establishment of protein localization to vacuole","termid":"GO:0072666"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01488":null,"SJAG_01981":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04552":null,"SJAG_05210":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"protein targeting to vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein vacuolar targeting","type":"exact"},{"name":"protein-vacuolar targeting","type":"exact"},{"name":"protein-vacuole targeting","type":"exact"},{"name":"vacuolar protein sorting","type":"exact"}],"termid":"GO:0006623","terms_by_termid":{"GO:0006623":null,"GO:0120113":null}}


id: GO:0140206
data:
  {"annotated_genes":["SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99197],"is_not":false,"summary":null,"term":"GO:0140206"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"},{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dipeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140206","terms_by_termid":{"GO:0140206":null}}


id: PBO:0080086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 47","termid":"PBO:0080086"}


id: PBO:0040314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 8","termid":"PBO:0040314"}


id: PBO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN axonemal central pair apparatus protein","termid":"PBO:0050823"}


id: PBO:0053498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 477","termid":"PBO:0053498"}


id: PBO:0028691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_organization","termid":"PBO:0028691"}


id: GO:0010097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires stamen or staminode identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of stamen identity","termid":"GO:0010097"}


id: PBO:0073226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 2","termid":"PBO:0073226"}


id: GO:0009954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation","synonyms":[{"name":"proximal/distal pattern specification","type":"narrow"}],"termid":"GO:0009954"}


id: PBO:0067306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 392, pseudogene","termid":"PBO:0067306"}


id: PBO:0029164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation","termid":"PBO:0029164"}


id: FYPO:0002504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification","termid":"FYPO:0002497"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein palmitoylation","synonyms":[{"name":"protein palmitoylation abolished","type":"exact"},{"name":"protein palmitoylation absent","type":"exact"}],"termid":"FYPO:0002504"}


id: GO:0061788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Epidermal Growth Factor (EGF) repeats.","definition_xrefs":["GOC:dph","GOC:25700513","PMID:25155514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"EGF repeat binding","synonyms":[{"name":"Epidermal Growth Factor repeat binding","type":"related"},{"name":"Epidermal growth factor domain binding","type":"broad"}],"termid":"GO:0061788"}


id: GO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming a gamma-delta T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell lineage commitment","termid":"GO:0002360"},{"relation_name":"part_of","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell lineage commitment","synonyms":[{"name":"gamma-delta T lymphocyte lineage commitment","type":"exact"},{"name":"gamma-delta T-cell lineage commitment","type":"exact"},{"name":"gamma-delta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002365"}


id: PBO:0085843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; induced by treatment with 8-methoxypsoralen and UVA irradiation; contains 10-11 predicted transmembrane domains","termid":"PBO:0085843"}


id: GO:0071361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ethanol","termid":"GO:0045471"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ethanol","termid":"GO:0071361"}


id: PBO:0067074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 105, pseudogene","termid":"PBO:0067074"}


id: PBO:0028182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercury","termid":"PBO:0028182"}


id: PBO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 2","termid":"PBO:0052623"}


id: GO:0062241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA double strand breaks and the nuclear inner membrane, in order to facilitate DNA repair.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"double strand break-nuclear membrane anchor activity","synonyms":[{"name":"DNA repair factory","type":"related"}],"termid":"GO:0062241"}


id: GO:0048099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["PMID:9374402","GOC:jid","PMID:10625531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc lineage restriction","termid":"GO:0035161"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"}


id: PATO:0001155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001155 absolute concentration (obsolete PATO:0001155)","termid":"PATO:0001155"}


id: PBO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght2","termid":"PBO:0018037"}


id: PBO:0078766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (ATT) 1-1","termid":"PBO:0078766"}


id: FYPO:0007681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a RNA-DNA hybrid ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal RNA-DNA hybrid ribonuclease activity","termid":"FYPO:0007681"}


id: SO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_DNA_chromosome","synonyms":[{"name":"circular single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000960"}


id: FYPO:0004537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling does not occur. As a result, the septation initiation network (SIN) signaling pathway is activated despite activation of the mitotic spindle assembly checkpoint (SAC). Normally, under conditions that activate the SAC, SIN activation is inhibited and the cell cycle arrests in anaphase. In this phenotype, premature SIN activation leads to premature cytokinesis and the formation of cut cells.","definition_xrefs":["PMID:11952833","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"FYPO:0004536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint override","synonyms":[{"name":"SIN activation in presence of active mitotic SAC","type":"exact"},{"name":"abolished response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"mitotic SAC override","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint override","type":"exact"},{"name":"septation initiation signaling activation in presence of active mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0004537"}


id: PBO:0026712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_in_stationary_phase_upon_glucose_starvation","termid":"PBO:0026712"}


id: GO:0035022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rac protein signal transduction","termid":"GO:0035020"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rac protein signal transduction","termid":"GO:0016601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Rac protein signal transduction","synonyms":[{"name":"activation of Rac protein signal transduction","type":"narrow"},{"name":"stimulation of Rac protein signal transduction","type":"narrow"},{"name":"up regulation of Rac protein signal transduction","type":"exact"},{"name":"up-regulation of Rac protein signal transduction","type":"exact"},{"name":"upregulation of Rac protein signal transduction","type":"exact"}],"termid":"GO:0035022"}


id: FYPO:0005932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at long terminal repeat (LTR) regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at long terminal repeat","synonyms":[{"name":"decreased nucleosome occupancy at LTR","type":"exact"},{"name":"decreased nucleosome occupancy at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at long terminal repeat during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in long terminal repeat","type":"exact"},{"name":"reduced nucleosome occupancy at long terminal repeat","type":"exact"}],"termid":"FYPO:0005932"}


id: PBO:0029267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0029267"}


id: PBO:0066036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 5","termid":"PBO:0066036"}


id: PBO:0050039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 7 (pseudogene)","termid":"PBO:0050039"}


id: PBO:0059650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 16","termid":"PBO:0059650"}


id: PBO:0078248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25-1","termid":"PBO:0078248"}


id: PBO:0061944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily S member 1","termid":"PBO:0061944"}


id: FYPO:0004917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:11402029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased positive regulation of protein kinase activity","synonyms":[{"name":"decreased activation of protein kinase activity","type":"narrow"},{"name":"decreased positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0004917"}


id: PBO:0073524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 binding domain protein 5 like","termid":"PBO:0073524"}


id: GO:0071044
data:
  {"annotated_genes":["SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88445],"is_not":false,"summary":null,"term":"GO:0071044"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histone messenger RNA (mRNA).","definition_xrefs":["PMID:17855393","GOC:krc","PMID:17179095","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0044248","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"histone mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071044","terms_by_termid":{"GO:0071044":null}}


id: FYPO:0003687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to nucleolus","synonyms":[{"name":"abnormal protein localisation to nucleolus","type":"exact"},{"name":"abnormal protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0003687"}


id: PBO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O4","termid":"PBO:0047824"}


id: PBO:0071973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 1","termid":"PBO:0071973"}


id: PBO:0088086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p; UBX7 has a paralog, UBX6, that arose from the whole genome duplication","termid":"PBO:0088086"}


id: GO:0016530
data:
  {"annotated_genes":["SJAG_01418","SJAG_03862","SJAG_00449","SJAG_04553","SJAG_02994","SJAG_03231","SJAG_03296","SJAG_04403","SJAG_02895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96213,95125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[89332,98309,100895,103676,85264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[110078,96753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[89334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein.","definition_xrefs":["PMID:11739376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_01418":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_03862":null,"SJAG_04403":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"metallochaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016530","terms_by_termid":{"GO:0016531":null,"GO:0016532":null,"GO:0034986":null,"GO:0140663":null}}


id: GO:0099009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The circularization of a viral genome following infection of a host cell. This is common amongst bacterial viruses to protect the viral genome ends from nucleases, to convert the linear genome to an integrative precursor or to give rise to the replicative form of the genome. It can be mediated by covalent closure of the DNA sticky ends, recombinaison between redundant terminal sequences or via the binding of a protein at the viral DNA extremities.","definition_xrefs":["VZ:3968","PMID:11894948","PMID:319596","PMID:15489417","PMID:19523475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome circularization","termid":"GO:0099009"}


id: GO:0008551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cd2+(in) = ADP + phosphate + Cd2+(out).","definition_xrefs":["PMID:17326661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cadmium ion transmembrane transporter activity","termid":"GO:0015086"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"P-type cadmium transporter activity","secondary_identifiers":["GO:0008561","EC:7.2.2.21","MetaCyc:RXN-21035","MetaCyc:3.6.3.3-RXN","RHEA:12132"],"synonyms":[{"name":"Cd(2+)-exporting ATPase activity","type":"related"},{"name":"Cd2+-exporting ATPase activity","type":"related"},{"name":"cadmium exporting ATPase activity","type":"exact"},{"name":"cadmium transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"cadmium-exporting ATPase activity","type":"narrow"},{"name":"cadmium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008551"}


id: PBO:0036149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_nitrogen_starvation","termid":"PBO:0036149"}


id: SO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence is representative of a class of similar sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar","termid":"SO:0000864"}


id: GO:1900645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chanoclavine-I biosynthetic process (obsolete GO:1900645)","synonyms":[{"name":"activation of chanoclavine-I anabolism","type":"exact"},{"name":"activation of chanoclavine-I biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I formation","type":"exact"},{"name":"activation of chanoclavine-I synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I formation","type":"exact"},{"name":"positive regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I formation","type":"exact"},{"name":"up regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I formation","type":"exact"},{"name":"up-regulation of chanoclavine-I synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I formation","type":"exact"},{"name":"upregulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900645"}


id: PBO:0054507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1907","termid":"PBO:0054507"}


id: GO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N2-methylguanine.","definition_xrefs":["PMID:17389639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"rRNA (guanine-N2-)-methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine-2-methyltransferase activity","type":"related"}],"termid":"GO:0008990"}


id: GO:1990257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic dense-core vesicle that transports a range of proteins including piccolo, bassoon, N-cadherin and syntaxin. The transported proteins may be associated with the external side of the vesicle, rather than being contained within the vesicle, therefore forming an aggregate of vesicle and proteins. Piccolo-bassoon transport vesicles (or PTVs) range in size from approximately 80 nm in diameter for dense core vesicles to 130 nm by 220 nm in area for aggregates. They are packaged via the trans-Golgi network before being transported through the axon.","definition_xrefs":["PMID:21569270","GOC:dr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"piccolo-bassoon transport vesicle","synonyms":[{"name":"PTV","type":"related"}],"termid":"GO:1990257"}


id: GO:0034203
data:
  {"annotated_genes":["SJAG_02897","SJAG_03774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90622,108751],"is_not":false,"summary":null,"term":"GO:0034203"}]},"cv_name":"biological_process","definition":"The translocation, or flipping, of glycolipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:go_curators","PMID:11807558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02897":null,"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"glycolipid translocation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034203","terms_by_termid":{"GO:0034203":null}}


id: PBO:0042619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDV3 homolog","termid":"PBO:0042619"}


id: PBO:0084112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heavy metal ion homeostasis protein; facilitates trafficking of Smf1p and Smf2p metal transporters to vacuole where they are degraded; acts as an adaptor protein with Rsp5p in the regulated endocytosis of Smf1p and is itself ubiquitylated by Rsp5p; controls metal ion transport, prevents metal hyperaccumulation, functions in copper detoxification","termid":"PBO:0084112"}


id: GO:1901635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of presynaptic active zone structure (obsolete GO:1901635)","synonyms":[{"name":"regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901635"}


id: GO:0008975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Tyr16-Leu17 and Phe25-Tyr26 bonds of oxidized insulin B chain. Also acts on other substrates of Molecular weight less than 7 kDa such as insulin and glucagon.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pitrilysin activity (obsolete GO:0008975)","synonyms":[{"name":"Escherichia coli metalloproteinase Pi","type":"related"},{"name":"Escherichia coli protease III","type":"related"},{"name":"PTR","type":"related"},{"name":"pitrilysin activity","type":"exact"},{"name":"protease III activity","type":"related"},{"name":"protease Pi activity","type":"related"},{"name":"proteinase Pi","type":"related"}],"termid":"GO:0008975"}


id: GO:0021720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"pons formation","termid":"GO:0021584"},{"relation_name":"part_of","term_name":"superior olivary nucleus morphogenesis","termid":"GO:0021719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus formation","termid":"GO:0021720"}


id: PBO:0088411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1","termid":"PBO:0088411"}


id: GO:0052454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052454)","synonyms":[{"name":"modulation by organism of symbiont JA-mediated defense response","type":"exact"},{"name":"modulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052454"}


id: PBO:0065810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3D, member RAS oncogene family","termid":"PBO:0065810"}


id: GO:0045128
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104162],"is_not":false,"summary":null,"term":"GO:0045128"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"negatively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0140013","GO:0006310","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiotic recombination","type":"exact"},{"name":"down-regulation of meiotic recombination","type":"exact"},{"name":"downregulation of meiotic recombination","type":"exact"},{"name":"inhibition of meiotic recombination","type":"narrow"},{"name":"suppression of meiotic recombination","type":"exact"}],"termid":"GO:0045128","terms_by_termid":{"GO:0045128":null}}


id: PBO:0085028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoylated calcium-binding protein; may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; human NCS1 functionally complements the heat sensitivity of a frq1 ts mutant","termid":"PBO:0085028"}


id: PBO:0086352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUF family mRNA-binding protein; Pumilio homology domain confers RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins; binding site composed of two UAAU tetranucleotides, separated by a 3-nt linker; PUF2 has a paralog, JSN1, that arose from the whole genome duplication","termid":"PBO:0086352"}


id: GO:1990761
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin sheetlike process extended by the leading edge of an axonal or dendritic growth cone; contains a dense meshwork of actin filaments.","definition_xrefs":["GOC:dos","PMID:25598228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium","termid":"GO:0030027"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone lamellipodium","termid":"GO:1990761"}


id: PBO:0091983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa2","termid":"PBO:0091983"}


id: PBO:0041159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 14","termid":"PBO:0041159"}


id: GO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:jsg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"D-serine transmembrane transport","termid":"GO:0042942"}


id: PBO:0053699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 900","termid":"PBO:0053699"}


id: GO:0071513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes decarboxylation of 4'-phosphopantothenoylcysteine to yield 4'-phosphopantetheine; this is the third step in the biosynthesis of Coenzyme A. The complex is homotrimeric in many eukaryotes, but is a heterotrimer in Saccharomyces.","definition_xrefs":["GOC:jh","PMID:19915539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase complex","termid":"GO:0071513"}


id: PBO:0072988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel and clathrin linker 1","termid":"PBO:0072988"}


id: GO:0035254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glutamate receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"glutamate receptor binding","termid":"GO:0035254"}


id: PBO:0040521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 1","termid":"PBO:0040521"}


id: FYPO:0002391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal DNA repeat regions is decreased.","definition_xrefs":["PMID:24945319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at ncRNA genes","termid":"FYPO:0004346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at rDNA","secondary_identifiers":["FYPO:0006350"],"synonyms":[{"name":"decreased protein localisation to chromatin at rDNA","type":"exact"},{"name":"decreased protein localization to chromatin at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at rDNA during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at rRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ribosomal DNA","type":"exact"},{"name":"decreased protein localization to rDNA","type":"exact"},{"name":"reduced protein localization to chromatin at rDNA","type":"exact"}],"termid":"FYPO:0002391"}


id: PBO:0063826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeobox 2A","termid":"PBO:0063826"}


id: GO:0099512
data:
  {"annotated_genes":["SJAG_05024","SJAG_02695","SJAG_01546","SJAG_00723","SJAG_01196","SJAG_03264","SJAG_02509","SJAG_00332","SJAG_01224","SJAG_03088","SJAG_02431","SJAG_02286","SJAG_03073","SJAG_02656","SJAG_00030","SJAG_04745","SJAG_05266","SJAG_01837","SJAG_00655","SJAG_04003","SJAG_04387","SJAG_02045","SJAG_04887","SJAG_02040","SJAG_01613","SJAG_00594","SJAG_00851","SJAG_00140","SJAG_02624","SJAG_00930","SJAG_00918","SJAG_01775","SJAG_03540","SJAG_00845","SJAG_05220","SJAG_00113","SJAG_01297","SJAG_01993","SJAG_02761","SJAG_03145","SJAG_01215","SJAG_02848","SJAG_03703","SJAG_04841","SJAG_02384","SJAG_03052","SJAG_01330","SJAG_02336","SJAG_02566","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105251,97931,91479,110501,101315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[87575,100195,108319,95389,103397,103608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[97598,94806,100068,87577,95390,104435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[91400,93765,99931],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[84038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097268"},{"annotations":[103398,110222,87578,93473,93168,114268,114787,85845,99933,95391,87352,97599,103609,100717,91401,96546,108952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[93169,85846,99934,100070,96548,98502,114788,110223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[84006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[85190,92961,96128,98943,101077,105039,115360,108321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[99935,93171,110227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990752"},{"annotations":[95395,96551],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[115611,87580,95397,84834,100827,114272],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[100076,87581,99727,104441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[93172],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[103688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[102492,96553,114794,97603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[94810,103689,95400,114274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[114022,93843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032982"},{"annotations":[87584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[90965,97606,95402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[97607,93173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[87586],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[85973,74747,96696,93483,99887,108323,103612,112847,110282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"A polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular polymer","termid":"GO:0099081"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00594":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02566":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_02848":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_03703":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04887":null,"SJAG_05024":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"supramolecular fiber","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:30726171":null},"secondary_identifiers":["GO:0043205"],"synonyms":[{"name":"fibril","type":"related"}],"termid":"GO:0099512","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0032982":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:0097268":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990752":null,"GO:1990941":null}}


id: PBO:0056314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 1","termid":"PBO:0056314"}


id: FYPO:0000307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and is smaller than normal. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore with abnormal morphology","termid":"FYPO:0000309"},{"relation_name":"is_a","term_name":"small spores","termid":"FYPO:0000346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable small spore","synonyms":[{"name":"lethal; small spore","type":"exact"},{"name":"spore germination abolished, small spores","type":"related"}],"termid":"FYPO:0000307"}


id: GO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + O2 = 4,5-chrysenedicarboxylate.","definition_xrefs":["UM-BBD_reactionID:r1128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4,5-dihydroxybenzo(a)pyrene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034810"}


id: GO:0033443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"AAA codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033443"}


id: PR:O14334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02984","PANTHER:PTHR20903:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.01","secondary_identifiers":["UniProtKB:O14334"],"synonyms":[{"name":"Spom972h-PFDN1","type":"exact"}],"termid":"PR:O14334"}


id: GO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031661)","synonyms":[{"name":"G2/M-specific down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific inhibition of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G2/M-specific negative regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"negative regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031661"}


id: PBO:0052908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-5, pseudogene","termid":"PBO:0052908"}


id: GO:0071500
data:
  {"annotated_genes":["SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98406],"is_not":false,"summary":null,"term":"GO:0071500"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrosative stress","termid":"GO:0051409"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrosative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071500","terms_by_termid":{"GO:0071500":null}}


id: GO:1905935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:TermGenie","PMID:25793578","GO_REF:0000058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"positively_regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate determination","synonyms":[{"name":"activation of cell fate determination","type":"narrow"},{"name":"up regulation of cell fate determination","type":"exact"},{"name":"up-regulation of cell fate determination","type":"exact"},{"name":"upregulation of cell fate determination","type":"exact"}],"termid":"GO:1905935"}


id: PBO:0052203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ1 downstream neighbor","termid":"PBO:0052203"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: PATO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000845 auditory ability (obsolete PATO:0000845)","termid":"PATO:0000845"}


id: PBO:0062879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 antisense RNA 1 (head to head)","termid":"PBO:0062879"}


id: PBO:0057931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3658","termid":"PBO:0057931"}


id: MOD:00394
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an acetyl group.","definition_xrefs":["PubMed:11857757","PubMed:12175151","PubMed:15350136","Unimod:1","PubMed:11999733","PubMed:14730666","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"acetylated residue","synonyms":[{"name":"AcRes","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"Acetylation (N terminus, N epsilon of Lysine, O of Serine) (Ac)","type":"exact"}],"termid":"MOD:00394"}


id: GO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During sexual reproduction, the creation of a single nucleus from two nuclei as a result of fusing the nuclear envelopes that surround each nuclei. This takes place following the mutual exchange of one of the two nuclei produced by the mitosis that follows the second meiotic nuclear division. This occurs in ciliated protozoans such as Tetrahymena.","definition_xrefs":["GOC:mah","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"karyogamy involved in conjugation with mutual genetic exchange","synonyms":[{"name":"karyogamy involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000744"}


id: GO:0061180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mammary gland epithelium over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelium development","synonyms":[{"name":"breast epithelium development","type":"exact"}],"termid":"GO:0061180"}


id: GO:1902166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902230"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902166"}


id: PBO:0050859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICMT divergent transcript","termid":"PBO:0050859"}


id: GO:0005760
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112538],"is_not":false,"summary":null,"term":"GO:0005760"}]},"cv_name":"cellular_component","definition":"A DNA polymerase complex consisting of a large subunit, responsible for the catalytic activities, and a small accessory subunit. Functions in the replication and repair of mitochondrial DNA.","definition_xrefs":["GOC:jl","PMID:12045093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"gamma DNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005760","terms_by_termid":{"GO:0005760":null}}


id: GO:0032476
data:
  {"annotated_genes":["SJAG_04568","SJAG_01865","SJAG_02583","SJAG_04434","SJAG_03810","SJAG_02163","SJAG_00554","SJAG_03029","SJAG_04923","SJAG_02063"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91921,97575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005953"},{"annotations":[93972,104203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904423"},{"annotations":[109940,88026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032478"},{"annotations":[86772,97577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005965"},{"annotations":[85750,99709,111132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005968"}]},"cv_name":"cellular_component","definition":"A complex that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms.","definition_xrefs":["PMID:16262699","PMID:14519123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_01865":null,"SJAG_02063":null,"SJAG_02163":null,"SJAG_02583":null,"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04568":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"polyprenyl diphosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032476","terms_by_termid":{"GO:0005953":null,"GO:0005965":null,"GO:0005968":null,"GO:0032478":null,"GO:1904423":null}}


id: GO:0034496
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90125],"is_not":false,"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the membranes of multivesicular bodies.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"part_of","term_name":"multivesicular body organization","termid":"GO:0036257"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"multivesicular body membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MVB membrane disassembly","type":"exact"}],"termid":"GO:0034496","terms_by_termid":{"GO:0034496":null}}


id: GO:0007537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inactivation of recombination at sequences around a mating type donor locus, with the consequence that the other donor is the only one available for mating type switching; exemplified by the HML locus and surrounding sequences on Chromosome III in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah","PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"donor selection","termid":"GO:0007535"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"inactivation of recombination (HML)","termid":"GO:0007537"}


id: PBO:0061607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1","termid":"PBO:0061607"}


id: GO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte homeostasis","synonyms":[{"name":"immune cell homeostasis","type":"exact"},{"name":"leucocyte homeostasis","type":"exact"}],"termid":"GO:0001776"}


id: PBO:0042501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 20","termid":"PBO:0042501"}


id: GO:2000851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of corticosteroid hormone secretion","termid":"GO:2000848"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"positively_regulates","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"}


id: PBO:0081135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP28 divergent transcript","termid":"PBO:0081135"}


id: GO:1990503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in neurons and associated with the formation of dendrodendritic gap junctions.","definition_xrefs":["PMID:7869120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"dendritic lamellar body","synonyms":[{"name":"DLB","type":"exact"}],"termid":"GO:1990503"}


id: GO:1905677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaptive immune effector response.","definition_xrefs":["ISBN:9781405196833","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"regulates","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune effector response","termid":"GO:1905677"}


id: FYPO:0006099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cytoplasm","termid":"FYPO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm","synonyms":[{"name":"decreased protein localisation to cytoplasm","type":"exact"},{"name":"decreased protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm","type":"exact"}],"termid":"FYPO:0006099"}


id: GO:1902429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of water channel activity.","definition_xrefs":["GOC:TermGenie","PMID:22095752","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of water channel activity","termid":"GO:1902427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of water channel activity","synonyms":[{"name":"activation of aquaporin","type":"narrow"},{"name":"activation of water channel activity","type":"narrow"},{"name":"aquaporin activation","type":"narrow"},{"name":"positive regulation of aquaporin","type":"narrow"},{"name":"up regulation of aquaporin","type":"narrow"},{"name":"up regulation of water channel activity","type":"exact"},{"name":"up-regulation of aquaporin","type":"narrow"},{"name":"up-regulation of water channel activity","type":"exact"},{"name":"upregulation of aquaporin","type":"narrow"},{"name":"upregulation of water channel activity","type":"exact"}],"termid":"GO:1902429"}


id: PBO:0040793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone gamma-carboxyglutamate protein","termid":"PBO:0040793"}


id: PBO:0030209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell","termid":"PBO:0030209"}


id: PBO:0082376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor of the yAP-1 family; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; mediates pleiotropic drug resistance and salt tolerance; nuclearly localized under oxidative stress and sequestered in the cytoplasm by Lot6p under reducing conditions; CIN5 has a paralog, YAP6, that arose from the whole genome duplication","termid":"PBO:0082376"}


id: PATO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased avidity","termid":"PATO:0002075"}


id: PBO:0039996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 2","termid":"PBO:0039996"}


id: GO:0097001
data:
  {"annotated_genes":["SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113671],"is_not":false,"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ceramide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097001","terms_by_termid":{"GO:0097001":null}}


id: PBO:0004646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase (predicted)","termid":"PBO:0004646"}


id: GO:0035607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor-type receptor binding to one of its physiological ligands, which contributes to the progression of the orbitofrontal cortex over time from its initial formation until its mature state.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"orbitofrontal cortex development","termid":"GO:0021769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development","synonyms":[{"name":"FGF receptor signaling pathway involved in orbitofrontal cortex development","type":"exact"},{"name":"FGFR signaling pathway involved in orbitofrontal cortex development","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in orbitofrontal cortex development","type":"exact"}],"termid":"GO:0035607"}


id: RO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_of","termid":"RO:0000079"}


id: PBO:0064570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 2","termid":"PBO:0064570"}


id: SO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A set of regions which overlap with minimal polymorphism to form a linear sequence.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path","synonyms":[{"name":"tiling path","type":"exact"}],"termid":"SO:0000472"}


id: PBO:0012247
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae pma1","termid":"PBO:0012247"}


id: GO:0072267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of the metanephric capsule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule specification","termid":"GO:0072130"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"metanephric capsule formation","termid":"GO:0072266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule specification","termid":"GO:0072267"}


id: GO:0009381
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid at sites flanking regions of damaged DNA to which the Uvr ABC excinuclease complexes bind.","definition_xrefs":["GOC:mah","PMID:15192705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788","GO:0140097"],"is_obsolete":false,"name":"excinuclease ABC activity","termid":"GO:0009381"}


id: PBO:0062103
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 1 pseudogene","termid":"PBO:0062103"}


id: PBO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase (predicted)","termid":"PBO:0002236"}


id: GO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the clypeus over time, from its formation to the mature structure. The clypeus is the shield-shaped plate on an insect's head.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus development","termid":"GO:0048723"}


id: PBO:0085282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane signal receptor for peroxisomal matrix proteins; oleate-inducible condition-specific import receptor for a subset of PTS1-containing matrix proteins; localizes to both the cytosol and the peroxisomal membrane; similar to human PEX5Rp, a peroxin protein 5 related protein; paralog of Pex5p","termid":"PBO:0085282"}


id: GO:0045562
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045562)","synonyms":[{"name":"regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"regulation of TRAIL receptor 2 synthesis","type":"exact"}],"termid":"GO:0045562"}


id: PBO:0081256
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF25 divergent transcript","termid":"PBO:0081256"}


id: PBO:0004227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen34 (predicted)","termid":"PBO:0004227"}


id: PBO:0084901
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tRNA:pseudouridine synthase; acts at positions 27 and 28, but not at position 72; efficiently and rapidly targeted to mitochondria, specifically dedicated to mitochondrial tRNA modification; mutation also affects pseudouridylation of some nuclear-encoded mRNAs; PUS2 has a paralog, PUS1, that arose from the whole genome duplication","termid":"PBO:0084901"}


id: GO:0080070
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-methylthiooctyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 8-methylthiooctyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4333"],"termid":"GO:0080070"}


id: GO:0062244
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume surrounded by the inner membrane of a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory lumen","synonyms":[{"name":"lumen of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062244"}


id: GO:0097201
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:18086556","PMID:18627600","GOC:rn","PMID:11027285","PMID:15575969","PMID:16556235"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0097201)","termid":"GO:0097201"}


id: PBO:0068729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 18, pseudogene","termid":"PBO:0068729"}


id: PBO:0090502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Rng2-like","termid":"PBO:0090502"}


id: PBO:0028475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NADH_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0028475"}


id: PBO:0108559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator Swi5","termid":"PBO:0108559"}


id: GO:0016810
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id: SO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the lysosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lysosomal_localization_signal","synonyms":[{"name":"lysosomal localization signal","type":"exact"}],"termid":"SO:0001530"}


id: MOD:02033
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(5) HexNAc(3)","definition_xrefs":["Unimod:1484","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dHex1Hex5HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(5) HexNAc(3)","type":"related"}],"termid":"MOD:02033"}


id: GO:2000854
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"is_a","term_name":"regulation of corticosterone secretion","termid":"GO:2000852"},{"relation_name":"positively_regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of corticosterone secretion","termid":"GO:2000854"}


id: GO:1990450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a linear polymer of ubiquitin. Linear ubiquitin polymers are formed by linking the amino-terminal methionine (M1) of one ubiquitin molecule to the carboxy-terminal glycine (G76) of the next.","definition_xrefs":["GOC:PARL","PMID:23453807","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin binding","termid":"GO:0043130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"linear polyubiquitin binding","synonyms":[{"name":"M1-linked ubiquitin chain binding","type":"exact"}],"termid":"GO:1990450"}


