# terms

id: GO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"negatively_regulates","term_name":"dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of dopamine receptor signaling pathway","synonyms":[{"name":"negative regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060160"}


id: GO:0015963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diadenosine triphosphate biosynthetic process","synonyms":[{"name":"diadenosine triphosphate anabolism","type":"exact"},{"name":"diadenosine triphosphate biosynthesis","type":"exact"},{"name":"diadenosine triphosphate formation","type":"exact"},{"name":"diadenosine triphosphate synthesis","type":"exact"}],"termid":"GO:0015963"}


id: PBO:0036453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microvillus inclusion disease","termid":"PBO:0036453"}


id: PBO:0031420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint","termid":"PBO:0031420"}


id: PBO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsense-mediated decay protein Upf2","termid":"PBO:0001566"}


id: PBO:0074337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2","termid":"PBO:0074337"}


id: MOD:01334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C labeled L-lysine.","definition_xrefs":["PubMed:12175151","PubMed:11857757","PubMed:12716131","OMSSA:138","PubMed:11999733","Unimod:188#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-lysine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"},{"name":"lys-13c6","type":"exact"}],"termid":"MOD:01334"}


id: GO:0052758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trinitrophenol + H- = 2,4,6-trinitrophenol hydride Meisenheimer complex. Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["PMID:11995829","GOC:mengo_curators","UM-BBD_reactionID:r1065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity","secondary_identifiers":["EC:1.3.99.-"],"synonyms":[{"name":"TNP reductase activity","type":"broad"},{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol hydride transferase activity","type":"exact"}],"termid":"GO:0052758"}


id: PBO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 23","termid":"PBO:0071605"}


id: PBO:0056747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit","termid":"PBO:0056747"}


id: GO:0008523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate.","definition_xrefs":["TC:2.A.21.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium-dependent multivitamin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-199206","Reactome:R-HSA-199219","Reactome:R-HSA-429581"],"termid":"GO:0008523"}


id: PBO:0076828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis, prostate and placenta expressed","termid":"PBO:0076828"}


id: GO:0034881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citrazinate + H2O = cis-aconitamide.","definition_xrefs":["UM-BBD_reactionID:r1343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"citrazinate hydrolase activity","termid":"GO:0034881"}


id: GO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"activation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"stimulation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"up regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"up-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"upregulation of long-term neuronal synaptic plasticity","type":"exact"}],"termid":"GO:0048170"}


id: PBO:0039752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 3","termid":"PBO:0039752"}


id: GO:0008735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (E)-4-(trimethylammonio)but-2-enoyl-CoA + L-carnitine = (E)-4-(trimethylammonio)but-2-enoate + L-carnitinyl-CoA and 4-trimethylammoniobutanoyl-CoA + L-carnitine = 4-trimethylammoniobutanoate + L-carnitinyl-CoA.","definition_xrefs":["PMID:7815937","PMID:8188598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"L-carnitine CoA-transferase activity","synonyms":[{"name":"L-carnitine dehydratase activity","type":"exact"},{"name":"L-carnitine hydro-lyase [4-(trimethylammonio)but-2-enoate-forming]","type":"related"},{"name":"L-carnitine hydro-lyase activity","type":"related"}],"termid":"GO:0008735"}


id: PBO:0081472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 346","termid":"PBO:0081472"}


id: GO:0031823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1D serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1D serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1D receptor binding","type":"exact"},{"name":"type 1D serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031823"}


id: GO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of apoptosis in the bitten organism.","definition_xrefs":["GOC:jl","PMID:17983639","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of apoptotic process in another organism (obsolete GO:0044534)","synonyms":[{"name":"envenomation resulting in modulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044534"}


id: GO:0019495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"proline catabolic process","termid":"GO:0006562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"proline catabolic process to 2-oxoglutarate","synonyms":[{"name":"proline breakdown to 2-oxoglutarate","type":"exact"},{"name":"proline catabolic process to 2-ketoglutarate","type":"exact"},{"name":"proline catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"proline catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"proline catabolism to 2-ketoglutarate","type":"exact"},{"name":"proline catabolism to alpha-ketoglutarate","type":"exact"},{"name":"proline catabolism to alpha-oxoglutarate","type":"exact"},{"name":"proline degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019495"}


id: GO:0043102
data:
  {"annotated_genes":["SJAG_01404","SJAG_02293","SJAG_00309","SJAG_00419","SJAG_03881","SJAG_04953","SJAG_03614","SJAG_02689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91770,96176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[103192,96834,88862,95201,86003,108626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[95202,88863,103193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"Any process which produces an amino acid from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00419":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"amino acid salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043102","terms_by_termid":{"GO:0019284":null,"GO:0019509":null,"GO:1990355":null}}


id: GO:1904499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin-mediated maintenance of transcription.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","PMID:22723415","GOC:TermGenie","GOC:BHF","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin-mediated maintenance of transcription (obsolete GO:1904499)","termid":"GO:1904499"}


id: PBO:0046858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAF1 antisense RNA 1","termid":"PBO:0046858"}


id: PBO:0040564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 4","termid":"PBO:0040564"}


id: GO:0008968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sedoheptulose-7-phosphate = D-alpha,beta-D-heptose 7-phosphate.","definition_xrefs":["PMID:11279237","MetaCyc:RXN0-4301","PMID:8631969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"D-sedoheptulose 7-phosphate isomerase activity","secondary_identifiers":["RHEA:27489"],"synonyms":[{"name":"phosphoheptose isomerase activity","type":"exact"}],"termid":"GO:0008968"}


id: FYPO:0001297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0000707"],"is_obsolete":false,"name":"abnormal palmitoyl-CoA ligase activity","synonyms":[{"name":"abnormal palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001297"}


id: PBO:0067961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 263","termid":"PBO:0067961"}


id: GO:0097334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a perphenazine stimulus. Perphenazine is a phenothiazine derivative having a chloro substituent at the 2-position and a 3-[4-(2-hydroxyethyl)piperazin-1-yl]propyl group at the N-10 position.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to perphenazine","termid":"GO:0097334"}


id: PBO:0085416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter for choline, ethanolamine, and carnitine; involved in the uptake of nitrogen mustard and the uptake of glycine betaine during hypersaline stress; co-regulated with phospholipid biosynthetic genes and negatively regulated by choline and myo-inositol","termid":"PBO:0085416"}


id: GO:0047726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferrocytochrome c + Fe3+ = ferricytochrome c + Fe2+.","definition_xrefs":["EC:1.9.98.1","MetaCyc:IRON--CYTOCHROME-C-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"iron-cytochrome-c reductase activity","secondary_identifiers":["RHEA:15617"],"synonyms":[{"name":"ferrocytochrome-c:Fe3+ oxidoreductase activity","type":"related"},{"name":"iron-cytochrome c reductase activity","type":"related"}],"termid":"GO:0047726"}


id: PBO:0040542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 1","termid":"PBO:0040542"}


id: FYPO:0006634
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115514,115526,115590],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115482],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length, i.e. the maximum distance between the cell ends, is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased vegetative cell length","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_04312","SJAG_04332","SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta","pka1delta","sty1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cell length during vegetative growth","type":"exact"},{"name":"increased vegetative cell length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006634","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: GO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"sarcomere","secondary_identifiers":["Wikipedia:Sarcomere"],"termid":"GO:0030017"}


id: PBO:0077074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein like 1","termid":"PBO:0077074"}


id: PBO:0053270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A3","termid":"PBO:0053270"}


id: PBO:0014600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triman, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014600"}


id: PBO:0012311
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotrimeric","termid":"PBO:0012311"}


id: PBO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA transporter (predicted)","termid":"PBO:0003709"}


id: PBO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"appears to be truncated","termid":"PBO:0000060"}


id: PATO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pressure","termid":"PATO:0001025"}


id: MOD:01268
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:271#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site T","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01268"}


id: PBO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp21 (predicted)","termid":"PBO:0003266"}


id: PBO:0073210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4B","termid":"PBO:0073210"}


id: PBO:0052335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2012 antisense RNA 1","termid":"PBO:0052335"}


id: PBO:0040733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor pseudogene 1","termid":"PBO:0040733"}


id: PBO:0046514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 6B","termid":"PBO:0046514"}


id: PBO:0087306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and WD-repeat protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype","termid":"PBO:0087306"}


id: GO:0035185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first nine mitotic division cycles of the insect embryo, during which the dividing nuclei lie deep in the interior of the egg and divide nearly synchronously. This is the first phase of the syncytial period where nuclei divide in a common cytoplasm without cytokinesis.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"},{"relation_name":"is_a","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}


id: PBO:0038847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 16","termid":"PBO:0038847"}


id: PBO:0005768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf73","termid":"PBO:0005768"}


id: PR:000050512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that lacks phosphorylation at the position equivalent to Ser-412 and that has been phosphorylated at the position equivalent to Ser-450 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos:(S450),UnPhos(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"Spom-rec8/Phos:2","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046","type":"narrow"},{"name":"rec8/Phos:(S450),UnPhos(S412)","type":"exact"}],"termid":"PR:000050512"}


id: GO:0050297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-L-phenylalanine + O2 = 4-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-semialdehyde.","definition_xrefs":["EC:1.13.11.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"stizolobate synthase activity","secondary_identifiers":["MetaCyc:RXN-8460","RHEA:21220"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:oxygen 4,5-oxidoreductase (recyclizing)","type":"related"}],"termid":"GO:0050297"}


id: GO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism modulates the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of viral release from host cell (obsolete GO:0044789)","termid":"GO:0044789"}


id: FYPO:0003993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to menadione","synonyms":[{"name":"decreased RNA accumulation during cellular response to menadione","type":"related"},{"name":"decreased RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to menadione","type":"exact"},{"name":"reduced RNA level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0003993"}


id: GO:1905463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA duplex unwinding.","definition_xrefs":["GO_REF:0000058","PMID:26503245","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA duplex unwinding","termid":"GO:1905462"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"DNA duplex unwinding","termid":"GO:0032508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA duplex unwinding","synonyms":[{"name":"down regulation of DNA duplex unwinding","type":"exact"},{"name":"down regulation of DNA unwinding","type":"exact"},{"name":"down regulation of duplex DNA melting","type":"exact"},{"name":"down-regulation of DNA duplex unwinding","type":"exact"},{"name":"down-regulation of DNA unwinding","type":"exact"},{"name":"down-regulation of duplex DNA melting","type":"exact"},{"name":"downregulation of DNA duplex unwinding","type":"exact"},{"name":"downregulation of DNA unwinding","type":"exact"},{"name":"downregulation of duplex DNA melting","type":"exact"},{"name":"inhibition of DNA duplex unwinding","type":"narrow"},{"name":"inhibition of DNA unwinding","type":"narrow"},{"name":"inhibition of duplex DNA melting","type":"narrow"},{"name":"negative regulation of DNA unwinding","type":"exact"},{"name":"negative regulation of duplex DNA melting","type":"exact"}],"termid":"GO:1905463"}


id: PBO:0002800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Ytm1 (predicted)","termid":"PBO:0002800"}


id: GO:0075096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont signal transduction mediated by G-protein gamma subunit (obsolete GO:0075096)","termid":"GO:0075096"}


id: PBO:0085325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol:ceramide phosphoinositol transferase; required for sphingolipid synthesis; can mutate to confer aureobasidin A resistance; also known as IPC synthase","termid":"PBO:0085325"}


id: PBO:0087345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphinganine C4-hydroxylase; catalyses the conversion of sphinganine to phytosphingosine in sphingolipid biosyntheis","termid":"PBO:0087345"}


id: GO:0050544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"icosatetraenoic acid binding","termid":"GO:0050543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"arachidonic acid binding","synonyms":[{"name":"arachidonate binding","type":"exact"}],"termid":"GO:0050544"}


id: FYPO:0004242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic S phase","synonyms":[{"name":"reduced protein kinase activity during mitotic S phase","type":"exact"}],"termid":"FYPO:0004242"}


id: PBO:0028397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_32S_rRNA_precursor_level","termid":"PBO:0028397"}


id: GO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyanophore differentiation","synonyms":[{"name":"activation of cyanophore differentiation","type":"narrow"},{"name":"stimulation of cyanophore differentiation","type":"narrow"},{"name":"up regulation of cyanophore differentiation","type":"exact"},{"name":"up-regulation of cyanophore differentiation","type":"exact"},{"name":"upregulation of cyanophore differentiation","type":"exact"}],"termid":"GO:0048783"}


id: GO:0047332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + diphosphate = O-phospho-L-serine + H+ + phosphate.","definition_xrefs":["RHEA:23764","EC:2.7.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"diphosphate-serine phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.80-RXN","KEGG_REACTION:R00584"],"synonyms":[{"name":"diphosphate:L-serine O-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--serine phosphotransferase activity","type":"related"},{"name":"pyrophosphate-L-serine phosphotransferase activity","type":"related"}],"termid":"GO:0047332"}


id: PBO:0054350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1743","termid":"PBO:0054350"}


id: GO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any virus-mediated process that modulates the levels of viral proteins in a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation by virus of viral protein levels in host cell","synonyms":[{"name":"regulation of viral protein levels","type":"exact"}],"termid":"GO:0046719"}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: GO:1901977
data:
  {"annotated_genes":["SJAG_04259","SJAG_00883","SJAG_01679","SJAG_01297","SJAG_02451","SJAG_03681","SJAG_02336","SJAG_03126","SJAG_03353","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103420,109978,95765,108153,104447,110453,86944,100082,112079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:23028116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001048"],"synonyms":[{"name":"down regulation of cell cycle checkpoint","type":"exact"},{"name":"down-regulation of cell cycle checkpoint","type":"exact"},{"name":"downregulation of cell cycle checkpoint","type":"exact"},{"name":"inhibition of cell cycle checkpoint","type":"narrow"},{"name":"negative regulation of G1/S checkpoint","type":"related"},{"name":"negative regulation of G1/S transition checkpoint","type":"related"}],"termid":"GO:1901977","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: PBO:0027345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_succinate_dehydrogenase_activity","termid":"PBO:0027345"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: PBO:0054173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1546","termid":"PBO:0054173"}


id: PBO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps53 (predicted)","termid":"PBO:0000980"}


id: GO:0102320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,8-cineole + NADPH + H+ + O2 = 2-exo-hydroxy-1,8-cineole + NADP + H2O.","definition_xrefs":["RHEA:32895","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,8-cineole 2-exo-monooxygenase activity","secondary_identifiers":["EC:1.14.14.56","MetaCyc:RXN-4342"],"termid":"GO:0102320"}


id: SO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A attribute describing the addition of a poly A tail to the 3' end of a mRNA molecule.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylated","termid":"SO:0000246"}


id: PATO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally anterior structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterioralized","termid":"PATO:0000615"}


id: GO:0019549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the pyruvate-dependent gamma aminobutyrate (GABA) transaminase.","definition_xrefs":["GOC:bf","MetaCyc:PWY-4321","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate decarboxylation to succinate","termid":"GO:0006540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process to succinate via succinate semialdehyde","synonyms":[{"name":"glutamate breakdown to succinate","type":"broad"},{"name":"glutamate catabolic process to succinate via pyruvate-dependent GABA-transaminase activity","type":"exact"},{"name":"glutamate degradation to succinate","type":"broad"}],"termid":"GO:0019549"}


id: PBO:0085067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonfunctional homolog of Gpm1p phosphoglycerate mutase; if functional, would convert 3-phosphoglycerate to 2-phosphoglycerate in glycolysis; GPM2 has a paralog, GPM3, that arose from the whole genome duplication","termid":"PBO:0085067"}


id: GO:0102085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + L-glutamate + ATP = H+ + p-aminobenzoyl glutamate + AMP + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"N-(4-aminobenzoyl)-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10884"],"termid":"GO:0102085"}


id: PBO:0056691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 1","termid":"PBO:0056691"}


id: PBO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific SAP domain containing protein","termid":"PBO:0018107"}


id: PR:000050531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been trimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00083.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me3:(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00083","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me3:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00083","type":"broad"},{"name":"hhf1/Me3:(K20)","type":"exact"},{"name":"histone H4 K20me3 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050531"}


id: MOD:01672
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-lysine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated lysine","termid":"MOD:01672"}


id: RO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}


id: PBO:0088491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin binding protein ortholog","termid":"PBO:0088491"}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: PBO:0065032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDX6 antisense RNA 1","termid":"PBO:0065032"}


id: PBO:0081949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2 pseudogene 3","termid":"PBO:0081949"}


id: PBO:0055056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2472","termid":"PBO:0055056"}


id: PBO:0050560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-1 related endogenous sequence","termid":"PBO:0050560"}


id: GO:0042901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arabinan, a polysaccharide composed of arabinose residues, from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:jl","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"arabinan transmembrane transporter activity","termid":"GO:0042901"}


id: GO:1900605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tensidol A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"tensidol A metabolic process","termid":"GO:1900603"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tensidol A biosynthetic process","synonyms":[{"name":"tensidol A anabolism","type":"exact"},{"name":"tensidol A biosynthesis","type":"exact"},{"name":"tensidol A formation","type":"exact"},{"name":"tensidol A synthesis","type":"exact"}],"termid":"GO:1900605"}


id: MOD:01853
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine either by forming a cross-link with peptidyl-cysteine or peptidyl-serine, or by condensation with free serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine","termid":"MOD:01853"}


id: GO:0106023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the onset of pupariation.","definition_xrefs":["PMID:26510564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pupariation","termid":"GO:0106023"}


id: PBO:0086244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may be involved in nonsense-mediated mRNA decay; interacts with Nam7p, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0086244"}


id: PBO:0027721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_deacetylation","termid":"PBO:0027721"}


id: GO:0006707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"is_a","term_name":"sterol catabolic process","termid":"GO:0016127"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cholesterol catabolic process","synonyms":[{"name":"cholesterol breakdown","type":"exact"},{"name":"cholesterol catabolism","type":"exact"},{"name":"cholesterol degradation","type":"exact"}],"termid":"GO:0006707"}


id: PBO:0082358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in degradation of the ER and nucleus; involved specifically in autophagy of perinuclear endoplasmic reticulum in response to nitrogen starvation or rapamycin treatment; localizes to the perinuclear ER","termid":"PBO:0082358"}


id: PBO:0070718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 23","termid":"PBO:0070718"}


id: PBO:0034209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in_attribute_of","termid":"PBO:0034209"}


id: PBO:0086788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy","termid":"PBO:0086788"}


id: PBO:0064656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA binding protein 2","termid":"PBO:0064656"}


id: GO:0004410
data:
  {"annotated_genes":["SJAG_04688"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98114],"is_not":false,"summary":null,"term":"GO:0004410"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + acetyl-CoA + H2O = CoA + H+ + homocitrate.","definition_xrefs":["RHEA:12929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homocitrate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.3.14","KEGG_REACTION:R00271","MetaCyc:HOMOCITRATE-SYNTHASE-RXN"],"synonyms":[{"name":"2-hydroxybutane-1,2,4-tricarboxylate 2-oxoglutarate-lyase (CoA- acetylating) activity","type":"related"},{"name":"2-hydroxybutane-1,2,4-tricarboxylate 2-oxoglutarate-lyase (CoA-acetylating)","type":"related"},{"name":"acetyl-CoA:2-oxoglutarate C-acetyltransferase (thioester-hydrolysing, carboxymethyl forming)","type":"related"},{"name":"acetyl-coenzyme A:2-ketoglutarate C-acetyl transferase activity","type":"related"},{"name":"homocitrate synthetase activity","type":"related"}],"termid":"GO:0004410","terms_by_termid":{"GO:0004410":null}}


id: PBO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase","termid":"PBO:0012288"}


id: PBO:0074891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 66","termid":"PBO:0074891"}


id: GO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the peritrophic membrane, a tubular sheath of cuticle that shields the epithelial cells of the midgut from the gut contents. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of peritrophic membrane","synonyms":[{"name":"structural constituent of peritrophic matrix","type":"related"}],"termid":"GO:0016490"}


id: GO:0016409
data:
  {"annotated_genes":["SJAG_00895","SJAG_04178","SJAG_01112","SJAG_04451","SJAG_01299","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99300,106349,104474,92101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"},{"annotations":[88990,101723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_02305":null,"SJAG_04178":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203567","Reactome:R-HSA-5686304"],"termid":"GO:0016409","terms_by_termid":{"GO:0004758":null,"GO:0019706":null}}


id: PBO:0087338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of specific cargo proteins at the multivesicular body; mRNA is targeted to the bud via the mRNA transport system involving She2p","termid":"PBO:0087338"}


id: PBO:0030396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus:cytoplasm_ratio","termid":"PBO:0030396"}


id: GO:0014073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tropane stimulus. Tropane is a nitrogenous bicyclic organic compound mainly known for a group of alkaloids derived from it (called tropane alkaloids), which include, among others, atropine and cocaine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tropane","termid":"GO:0014073"}


id: GO:0032303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of an icosanoid from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"regulates","term_name":"icosanoid secretion","termid":"GO:0032309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of icosanoid secretion","synonyms":[{"name":"regulation of eicosanoid secretion","type":"exact"}],"termid":"GO:0032303"}


id: PBO:0074520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A12","termid":"PBO:0074520"}


id: SO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TTCTTTGTTY, bound an HMG-box transcription factor such as S. pombe Ste11, and found in promoters of genes up-regulated early in meiosis.","definition_xrefs":["PMID:1657709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_box","synonyms":[{"name":"TR box","type":"exact"}],"termid":"SO:0001858"}


id: PBO:0027015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027015"}


id: GO:1904680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a peptide from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"peptide transmembrane transporter activity","secondary_identifiers":["GO:0015197","GO:0015637","Reactome:R-HSA-1500817"],"synonyms":[{"name":"peptide transporter activity","type":"related"},{"name":"peptide uptake permease activity","type":"related"}],"termid":"GO:1904680"}


id: PBO:0108541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 6, pseudogene","termid":"PBO:0108541"}


id: GO:0071171
data:
  {"annotated_genes":["SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89554],"is_not":false,"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that takes place at the RTS1 termination site in the mating type locus, in a specific direction required for subsequent imprinting and mating-type switching.","definition_xrefs":["PMID:12009298","PMID:18723894","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific DNA replication termination","termid":"GO:0071170"},{"relation_name":"part_of","term_name":"mating-type locus imprinting","termid":"GO:0071515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"site-specific DNA replication termination at RTS1 barrier","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071171","terms_by_termid":{"GO:0071171":null}}


id: FYPO:0000071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aureobasidin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to aureobasidin A","synonyms":[{"name":"resistance to AbA","type":"exact"},{"name":"resistance to aureobasidin A during mitotic cell cycle","type":"related"},{"name":"resistance to aureobasidin A during vegetative growth","type":"exact"},{"name":"resistant to aureobasidin A","type":"exact"}],"termid":"FYPO:0000071"}


id: PBO:0076270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntabulin","termid":"PBO:0076270"}


id: GO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that connects the inner and outer membranes of animal mitochondria and acts as a pore that can open transiently to allow free diffusion of solutes between the mitochondrial matrix and the cytosol. The pore complex is formed of the voltage-dependent anion channel (VDAC), the adenine nucleotide translocase (ANT) and cyclophilin-D (CyP-D).","definition_xrefs":["PMID:10393078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial envelope","termid":"GO:0005740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial permeability transition pore complex","synonyms":[{"name":"MPTP complex","type":"exact"},{"name":"PTPC","type":"broad"},{"name":"mitochondrial PT pore complex","type":"exact"}],"termid":"GO:0005757"}


id: FYPO:0004120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that is smaller than normal, has a septum with abnormal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, small cell with abnormal septum morphology","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, small cell with abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004120"}


id: PBO:0069614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 891, pseudogene","termid":"PBO:0069614"}


id: GO:2000714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000714)","synonyms":[{"name":"positive regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000714"}


id: GO:0043321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell degranulation","synonyms":[{"name":"regulation of NK cell degranulation","type":"exact"},{"name":"regulation of NK cell granule exocytosis","type":"exact"},{"name":"regulation of natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043321"}


id: PBO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec24","termid":"PBO:0002795"}


id: PBO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MAC1","termid":"PBO:0000338"}


id: PBO:0027398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-UAA_suppression","termid":"PBO:0027398"}


id: PBO:0074455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine oxidase","termid":"PBO:0074455"}


id: SO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This attribute describes a gene where heritable changes other than those in the DNA sequence occur. These changes include: modification to the DNA (such as DNA methylation, the covalent modification of cytosine), and post-translational modification of histones.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified","synonyms":[{"name":"epigenetically modified","type":"exact"}],"termid":"SO:0000133"}


id: PBO:0001998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyltransferase I beta subunit Cwg2","termid":"PBO:0001998"}


id: FYPO:0000676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abnormal protein targeting during vegetative growth","termid":"FYPO:0000675"},{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein targeting to vacuole","synonyms":[{"name":"abnormal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0000676"}


id: GO:0046234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fluorene, a tricyclic polycyclic aromatic hydrocarbon containing a five-membered ring. It is a major component of fossil fuels and their derivatives and is also a by-product of coal-conversion and energy-related industries. It is commonly found in vehicle exhaust emissions, crude oils, motor oils, coal and oil combustion products, waste incineration, and industrial effluents.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete fluorene biosynthetic process (obsolete GO:0046234)","synonyms":[{"name":"fluorene anabolism","type":"exact"},{"name":"fluorene biosynthesis","type":"exact"},{"name":"fluorene biosynthetic process","type":"exact"},{"name":"fluorene formation","type":"exact"},{"name":"fluorene synthesis","type":"exact"}],"termid":"GO:0046234"}


id: PBO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 1","termid":"PBO:0075303"}


id: PBO:0054662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2068","termid":"PBO:0054662"}


id: PBO:0059461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesogenin 1","termid":"PBO:0059461"}


id: PBO:0004503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght2","termid":"PBO:0004503"}


id: PBO:0027174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_G418","termid":"PBO:0027174"}


id: PBO:0055320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2748","termid":"PBO:0055320"}


id: PR:Q9UTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C1071.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.09c","secondary_identifiers":["UniProtKB:Q9UTQ5"],"synonyms":[{"name":"Spom972h-DNAJC9","type":"exact"}],"termid":"PR:Q9UTQ5"}


id: PBO:0028383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0028383"}


id: GO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraglomerular mesangial cell proliferation","synonyms":[{"name":"Goormaghtigh proliferation","type":"related"},{"name":"lacis cell proliferation","type":"related"}],"termid":"GO:0072122"}


id: PBO:0051389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 6","termid":"PBO:0051389"}


id: PBO:0081849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 782","termid":"PBO:0081849"}


id: PBO:0051486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 1","termid":"PBO:0051486"}


id: PBO:0071023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 25","termid":"PBO:0071023"}


id: PBO:0012889
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quant_gene_ex_cell_distribution","termid":"PBO:0012889"}


id: PR:Q9USX4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl35b gene.","definition_xrefs":["UniProtKB:Q9USX4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L33-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.01c","synonyms":[{"name":"L37A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl35b","type":"exact"}],"termid":"PR:Q9USX4"}


id: GO:0071783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) cisternal network. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["GOC:vw","PMID:16469703","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network organization","synonyms":[{"name":"ER cisternal network organisation","type":"exact"},{"name":"ER cisternal network organization","type":"exact"},{"name":"endoplasmic reticulum cisternal network organisation","type":"exact"}],"termid":"GO:0071783"}


id: GO:0099153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of serotonin from a presynapse, across a chemical synapse, the subsequent activation of serotonin receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic transmission, serotonergic","synonyms":[{"name":"serotonergic synaptic transmission","type":"exact"}],"termid":"GO:0099153"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: FYPO:0006436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is abnormal when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"abnormal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"abnormal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006436"}


id: GO:2000919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucuronoxylan catabolic process","termid":"GO:2000916"},{"relation_name":"is_a","term_name":"regulation of glucuronoarabinoxylan catabolic process","termid":"GO:2000918"},{"relation_name":"is_a","term_name":"negative regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000922"},{"relation_name":"negatively_regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"negative regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000919"}


id: PBO:0059023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 12","termid":"PBO:0059023"}


id: GO:0016880
data:
  {"annotated_genes":["SJAG_04544","SJAG_01845","SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017178"},{"annotations":[60913,90474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004356"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of an acid to ammonia (NH3) or an amide via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_01845":null,"SJAG_04544":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acid-ammonia (or amide) ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.1.-"],"synonyms":[{"name":"amide synthase activity","type":"exact"}],"termid":"GO:0016880","terms_by_termid":{"GO:0004356":null,"GO:0017178":null}}


id: PBO:0071178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 19","termid":"PBO:0071178"}


id: PBO:0083826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; poly (A) mRNA binding subunit which recruits mRNA to the complex; the Pan2p-Pan3p complex controls poly(A) tail length and regulates the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0083826"}


id: GO:0045997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid biosynthetic process","termid":"GO:0007554"},{"relation_name":"is_a","term_name":"negative regulation of ecdysteroid metabolic process","termid":"GO:0045965"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"down regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"down-regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"downregulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"inhibition of ecdysteroid biosynthetic process","type":"narrow"},{"name":"negative regulation of ecdysteroid anabolism","type":"exact"},{"name":"negative regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"negative regulation of ecdysteroid formation","type":"exact"},{"name":"negative regulation of ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045997"}


id: PBO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Msa1","termid":"PBO:0001491"}


id: GO:0000447
data:
  {"annotated_genes":["SJAG_01623","SJAG_01551","SJAG_02644","SJAG_00955","SJAG_04174","SJAG_00897","SJAG_04916","SJAG_03952","SJAG_04524","SJAG_06613","SJAG_00772","SJAG_02547","SJAG_03796","SJAG_02250","SJAG_02553","SJAG_03234","SJAG_00965","SJAG_04582","SJAG_03425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89616,90905,92697,92987,95669,95991,99312,100738,100954,101745,101837,101838,103812,104141,105201,109684,111483,111567,114733],"is_not":false,"summary":null,"term":"GO:0000447"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A2","type":"narrow"}],"termid":"GO:0000447","terms_by_termid":{"GO:0000447":null}}


id: PBO:0071453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 59","termid":"PBO:0071453"}


id: GO:0035338
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103662],"is_not":false,"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a long-chain fatty-acyl-CoA any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0006629","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acyl CoA biosynthetic process","type":"exact"},{"name":"long-chain fatty-acyl-CoA anabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"long-chain fatty-acyl-CoA formation","type":"exact"},{"name":"long-chain fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0035338","terms_by_termid":{"GO:0035338":null}}


id: PBO:0072780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SACS antisense RNA 1","termid":"PBO:0072780"}


id: PBO:0065911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L antisense RNA 1","termid":"PBO:0065911"}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["MetaCyc:RXN-11629","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geranylgeraniol kinase activity","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: GO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a metallo-oxygen cluster.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster (obsolete GO:0030925)","termid":"GO:0030925"}


id: GO:0008795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + deamido-NAD+ + NH3 = AMP + diphosphate + NAD+.","definition_xrefs":["EC:6.3.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"NAD+ synthase activity","secondary_identifiers":["RHEA:21188","GO:0008749","MetaCyc:NAD-SYNTH-NH3-RXN","GO:0016965"],"synonyms":[{"name":"NAD synthase (AMP-forming)","type":"exact"},{"name":"NAD synthase activity","type":"exact"},{"name":"NAD synthetase activity","type":"related"},{"name":"NAD(+) synthetase activity","type":"related"},{"name":"NAD+ synthetase activity","type":"related"},{"name":"deamido-NAD+:ammonia ligase (AMP-forming)","type":"related"},{"name":"diphosphopyridine nucleotide synthetase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide synthetase activity","type":"related"}],"termid":"GO:0008795"}


id: PBO:0065948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component B","termid":"PBO:0065948"}


id: PBO:0054617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2022","termid":"PBO:0054617"}


id: PATO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000925 absolute enzyme function (obsolete PATO:0000925)","termid":"PATO:0000925"}


id: PR:O14095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin domain-containing protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21148:SF11","PRO:DNx","OMA:SCHPO01642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein plp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.12c","secondary_identifiers":["UniProtKB:O14095"],"synonyms":[{"name":"Spom972h-TXNDC9","type":"exact"},{"name":"phosducin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14095"}


id: PBO:0030564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_tyrosine_level","termid":"PBO:0030564"}


id: PBO:0043943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptochrome circadian regulator 2","termid":"PBO:0043943"}


id: PR:Q12519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q12519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C330.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.07c","synonyms":[{"name":"Spom972h-SPCC330.07c","type":"exact"}],"termid":"PR:Q12519"}


id: PBO:0091637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm6","termid":"PBO:0091637"}


id: GO:1900372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:go_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleotide biosynthetic process","synonyms":[{"name":"down-regulation of purine nucleotide synthesis","type":"exact"},{"name":"down regulation of purine nucleotide anabolism","type":"exact"},{"name":"down regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of purine nucleotide formation","type":"exact"},{"name":"down regulation of purine nucleotide synthesis","type":"exact"},{"name":"down-regulation of purine nucleotide anabolism","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of purine nucleotide formation","type":"exact"},{"name":"downregulation of purine nucleotide anabolism","type":"exact"},{"name":"downregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of purine nucleotide formation","type":"exact"},{"name":"downregulation of purine nucleotide synthesis","type":"exact"},{"name":"inhibition of purine nucleotide anabolism","type":"exact"},{"name":"inhibition of purine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of purine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of purine nucleotide formation","type":"exact"},{"name":"inhibition of purine nucleotide synthesis","type":"exact"},{"name":"negative regulation of purine nucleotide anabolism","type":"exact"},{"name":"negative regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of purine nucleotide formation","type":"exact"},{"name":"negative regulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900372"}


id: SO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_with_retained_intron","synonyms":[{"name":"lncRNA with retained intron","type":"exact"},{"name":"lncRNA_retained_intron","type":"exact"}],"termid":"SO:0002113"}


id: PBO:0018159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-threonyl-carbamoyl-adenosine (t6A), a modification protein Sua5 (predicted)","termid":"PBO:0018159"}


id: PBO:0041006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORCS7-ASMT readthrough (NMD candidate)","termid":"PBO:0041006"}


id: FYECO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2-deoxyglucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2-DG","synonyms":[{"name":"2-deoxy-D-glucose added","type":"exact"},{"name":"2-deoxyglucose added","type":"exact"}],"termid":"FYECO:0000332"}


id: PBO:0052338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KICSTOR subunit 2","termid":"PBO:0052338"}


id: GO:0021504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the median and lateral hinge points in the neural folds. These are created by apical constriction and basal expansion of the underlying neural cells. The median hinge point extends for the entire length of the neural tube, and the lateral hinge points do not form in the spinal cord region of the neural tube.","definition_xrefs":["PMID:15806586","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","PMID:13679871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural fold bending","termid":"GO:0021503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold hinge point formation","synonyms":[{"name":"neural fold furrowing","type":"narrow"}],"termid":"GO:0021504"}


id: GO:0060831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the dorsal/ventral pattern of the neural tube.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"dorsal/ventral neural tube patterning","termid":"GO:0021904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:0060831"}


id: GO:1990913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane that is part of the head section of a sperm cell.","definition_xrefs":["PMID:24478030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"sperm head","termid":"GO:0061827"},{"relation_name":"part_of","term_name":"sperm plasma membrane","termid":"GO:0097524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"sperm head plasma membrane","termid":"GO:1990913"}


id: PBO:0012583
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G Protein Beta gene","termid":"PBO:0012583"}


id: PBO:0087803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane protein with a conserved CYSTM module; predicted to be palmitoylated; has similarity to hydrophilins, which are involved in the adaptive response to hyperosmotic conditions; YBR016W has a paralog, YDL012C, that arose from the whole genome duplication","termid":"PBO:0087803"}


id: PR:Q9HDU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.06c gene.","definition_xrefs":["UniProtKB:Q9HDU9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.06c","synonyms":[{"name":"Spom972h-SPBPB2B2.06c","type":"exact"}],"termid":"PR:Q9HDU9"}


id: PBO:0062402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 25 pseudogene","termid":"PBO:0062402"}


id: PBO:0055018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2433","termid":"PBO:0055018"}


id: PBO:0111773
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DNL","termid":"PBO:0111773"}


id: PBO:0042602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 2","termid":"PBO:0042602"}


id: RO:HOM0000034
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes when duplications more recent than the species split have occurred in one species but not the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_1_to_many_homology_relationship_with","termid":"RO:HOM0000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_orthology_relationship_with","synonyms":[{"name":"1 to many orthologous to","type":"exact"},{"name":"1:many orthology","type":"exact"},{"name":"co-orthology","type":"related"},{"name":"many to 1 orthology","type":"related"},{"name":"one-to-many orthology","type":"exact"}],"termid":"RO:HOM0000034"}


id: PBO:0029085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_clotrimazole","termid":"PBO:0029085"}


id: GO:1902471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring localization.","definition_xrefs":["PMID:22786806","PMID:19959363","GOC:TermGenie","PMID:21246752"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring localization (obsolete GO:1902471)","termid":"GO:1902471"}


id: GO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"negatively_regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing","synonyms":[{"name":"negative regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060149"}


id: PBO:0027478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis_checkpoint","termid":"PBO:0027478"}


id: PBO:0084368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-interacting protein in SNARE complex assembly machinery; acts at late step in secretion; interacts with membranes through two distinct binding sites; shows genetic and physical interactions with Sec1p; required for prospore membrane formation during sporulation; N-terminus closely associates with plasma membrane, C-terminus colocalizes with Sec4p on intracellular membranes; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0084368"}


id: GO:0033485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"cyanidin 3-O-glucoside metabolic process","termid":"GO:1901038"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"cyanidin 3-O-glucoside anabolism","type":"exact"},{"name":"cyanidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"cyanidin 3-O-glucoside formation","type":"exact"},{"name":"cyanidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033485"}


id: GO:1905781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GOC:kmv","GO_REF:0000058","PMID:17401362","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid translocation","termid":"GO:0061093"},{"relation_name":"is_a","term_name":"negative regulation of execution phase of apoptosis","termid":"GO:1900118"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"down regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"down-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"downregulation of externalization of phosphatidylserine","type":"exact"},{"name":"downregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"inhibition of externalization of phosphatidylserine","type":"narrow"},{"name":"inhibition of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"negative regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905781"}


id: PBO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.4","termid":"PBO:0002793"}


id: SO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to repeating units. The forms found in nature are deoxyribonucleic acid (DNA), where the repeating units are 2-deoxy-D-ribose rings connected to a phosphate backbone, and ribonucleic acid (RNA), where the repeating units are D-ribose rings connected to a phosphate backbone.","definition_xrefs":["RSC:cb","CHEBI:33696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Nucleic_acid"],"synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"SO:0000348"}


id: PBO:0051266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA inducing protein","termid":"PBO:0051266"}


id: PBO:0057831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3149","termid":"PBO:0057831"}


id: PBO:0011423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0011423"}


id: GO:0101004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the cytolytic granule.","definition_xrefs":["PMID:17272266","PMID:21247065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"part_of","term_name":"cytolytic granule","termid":"GO:0044194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"cytolytic granule membrane","termid":"GO:0101004"}


id: GO:0070748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-35 receptor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-35 receptor binding","synonyms":[{"name":"IL-35","type":"narrow"},{"name":"interleukin-35 receptor ligand","type":"narrow"}],"termid":"GO:0070748"}


id: PR:Q09820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulator of nonsense transcripts 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00313","PANTHER:PTHR10887:SF26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase upf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.06c","secondary_identifiers":["UniProtKB:Q09820"],"synonyms":[{"name":"Spom972h-UPF1","type":"exact"},{"name":"nonsense-mediated mRNA decay protein upf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulator of nonsense transcripts 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"up-frameshift suppressor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09820"}


id: GO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior cibarial plate over time, from their formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior cibarial plate development","termid":"GO:0048722"}


id: PBO:0072400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 5","termid":"PBO:0072400"}


id: PBO:0075750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2 pseudogene","termid":"PBO:0075750"}


id: PBO:0052921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-4","termid":"PBO:0052921"}


id: GO:0030295
data:
  {"annotated_genes":["SJAG_01213","SJAG_00457","SJAG_03936","SJAG_02605","SJAG_00318","SJAG_04020","SJAG_02026","SJAG_04200","SJAG_04509","SJAG_01401","SJAG_01605","SJAG_01000","SJAG_03371","SJAG_03695","SJAG_05017","SJAG_03618","SJAG_04614","SJAG_03699","SJAG_01411","SJAG_04502","SJAG_03340","SJAG_04140","SJAG_02785","SJAG_02232","SJAG_02057","SJAG_03090","SJAG_00236","SJAG_02332","SJAG_00333","SJAG_00142","SJAG_00439","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84091,85452,87513,95273,95274,95378,103329,106035,106036,106723,107627,108680,112503,113435,114924,115041,115042],"is_not":false,"summary":null,"term":"GO:0030295"},{"annotations":[88342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[108280,113240,105073,101193,97810,109166,107112,107396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[101302,87076,84159,85467,87395,106744,109167,87350,105466,113436,114506,87396,96160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"},{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01000":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"protein kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030295","terms_by_termid":{"GO:0019912":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: PBO:0060198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 20, cell surface associated","termid":"PBO:0060198"}


id: PBO:0044933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase zeta","termid":"PBO:0044933"}


id: GO:0004229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of gelatin types I and V and collagen types IV and V.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gelatinase B activity (obsolete GO:0004229)","synonyms":[{"name":"92-kDa gelatinase activity","type":"narrow"},{"name":"92-kDa type IV collagenase activity","type":"narrow"},{"name":"95 kDa type IV collagenase/gelatinase activity","type":"related"},{"name":"MMP 9","type":"related"},{"name":"MMP-9","type":"exact"},{"name":"collagenase IV","type":"related"},{"name":"collagenase type IV","type":"related"},{"name":"gelatinase B activity","type":"exact"},{"name":"gelatinase MMP 9","type":"related"},{"name":"macrophage gelatinase activity","type":"narrow"},{"name":"matrix metalloproteinase 9 activity","type":"related"},{"name":"type IV collagen metalloproteinase","type":"broad"},{"name":"type V collagenase activity","type":"related"}],"termid":"GO:0004229"}


id: PBO:0079683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3D","termid":"PBO:0079683"}


id: PBO:0089519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4","termid":"PBO:0089519"}


id: GO:0033714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: secondary alcohol + O2 = H2O2 + ketone.","definition_xrefs":["EC:1.1.3.18","RHEA:23180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"secondary-alcohol oxidase activity","secondary_identifiers":["KEGG_REACTION:R02277","MetaCyc:SECONDARY-ALCOHOL-OXIDASE-RXN"],"synonyms":[{"name":"polyvinyl alcohol oxidase activity","type":"related"},{"name":"secondary alcohol oxidase activity","type":"related"},{"name":"secondary-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033714"}


id: PBO:0048669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase alpha","termid":"PBO:0048669"}


id: PBO:0051890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 1","termid":"PBO:0051890"}


id: GO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"positive regulation of VLDL remodeling","type":"exact"},{"name":"positive regulation of VLDL remodelling","type":"exact"},{"name":"positive regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010902"}


id: PBO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.4","termid":"PBO:0000257"}


id: PBO:0031886
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RFC5","termid":"PBO:0031886"}


id: PBO:0064193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 1","termid":"PBO:0064193"}


id: PBO:0084834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that interacts with mitochondrial RNA polymerase; interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription","termid":"PBO:0084834"}


id: PBO:0056597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 2","termid":"PBO:0056597"}


id: GO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance released by symbiont from symbiotic structure (obsolete GO:0085002)","termid":"GO:0085002"}


id: PATO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having triangular faces that meet at a common point and containing a polygonal shaped base.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyramidal","termid":"PATO:0002336"}


id: PBO:0061022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 5","termid":"PBO:0061022"}


id: GO:0090324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"}


id: PBO:0061487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogranin","termid":"PBO:0061487"}


id: GO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-tyrosine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"L-tyrosine aminotransferase activity","termid":"GO:0070547"}


id: PBO:0076848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TESC antisense RNA 1 (head to head)","termid":"PBO:0076848"}


id: PBO:0060287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 4","termid":"PBO:0060287"}


id: PBO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, centromeric (predicted)","termid":"PBO:0002216"}


id: FYPO:0000496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal mitochondrial transport","termid":"FYPO:0000495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased mitochondrial transport","synonyms":[{"name":"decreased mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: decreased","type":"related"},{"name":"reduced mitochondrial transport","type":"exact"}],"termid":"FYPO:0000496"}


id: GO:0016042
data:
  {"annotated_genes":["SJAG_04292","SJAG_02763","SJAG_02161","SJAG_00519","SJAG_02089","SJAG_01036","SJAG_00321","SJAG_02091","SJAG_01519","SJAG_01219","SJAG_04973","SJAG_03604","SJAG_03204","SJAG_02093","SJAG_00622","SJAG_04110","SJAG_04311","SJAG_00413","SJAG_04954","SJAG_02543","SJAG_00199","SJAG_00706","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046464"},{"annotations":[110042,93876,88770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044242"},{"annotations":[108028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[87661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[86348,110936,99164,93965,88090,97698,88081,96995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[90126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046461"},{"annotations":[113149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[90127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[89584,92134,98042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009395"},{"annotations":[96184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[86059,105013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"},{"annotations":[88096,113733,90241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_00413":null,"SJAG_00519":null,"SJAG_00622":null,"SJAG_00706":null,"SJAG_01036":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02543":null,"SJAG_02763":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04311":null,"SJAG_04954":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006724","GO:0044240","Wikipedia:Lipid_catabolism"],"synonyms":[{"name":"lipid breakdown","type":"exact"},{"name":"lipid catabolism","type":"exact"},{"name":"lipid degradation","type":"exact"},{"name":"lipolysis","type":"exact"},{"name":"multicellular organism lipid catabolic process","type":"narrow"},{"name":"multicellular organismal lipid catabolic process","type":"narrow"}],"termid":"GO:0016042","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0006660":null,"GO:0009062":null,"GO:0009395":null,"GO:0016095":null,"GO:0019433":null,"GO:0034638":null,"GO:0044242":null,"GO:0046461":null,"GO:0046464":null,"GO:0046475":null,"GO:0046521":null}}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["UniProtKB:O13853","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: GO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type IV hypersensitivity","termid":"GO:0001807"}


id: GO:0009702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose + ATP = beta-L-arabinose 1-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:20153","EC:2.7.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-arabinokinase activity","secondary_identifiers":["MetaCyc:L-ARABINOKINASE-RXN","KEGG_REACTION:R01754"],"synonyms":[{"name":"ATP:L-arabinose 1-phosphotransferase activity","type":"exact"},{"name":"L-arabinokinase (phosphorylating)","type":"related"}],"termid":"GO:0009702"}


id: GO:0052698
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"},{"annotations":[107729,99815,107728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"cellular modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"ergothioneine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate metabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine metabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine metabolism","type":"exact"},{"name":"ergothioneine metabolism","type":"exact"}],"termid":"GO:0052698","terms_by_termid":{"GO:0052699":null,"GO:0140479":null}}


id: GO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class I here refers to classical class I molecules.","definition_xrefs":["PMID:16181335","GOC:add","PMID:15771591","PMID:15224093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","termid":"GO:0042590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of exogenous peptide antigen via MHC class I","type":"exact"},{"name":"TAP-independent exogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I, TAP-independent","type":"exact"}],"termid":"GO:0002480"}


id: PBO:0066235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 43","termid":"PBO:0066235"}


id: GO:0031770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth hormone-releasing hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"growth hormone-releasing hormone receptor binding","synonyms":[{"name":"growth hormone-releasing hormone receptor ligand","type":"narrow"}],"termid":"GO:0031770"}


id: GO:1901693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:12021768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"},{"relation_name":"negatively_regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye retinal cell apoptotic process","synonyms":[{"name":"down regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"down-regulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"downregulation of compound eye retinal cell apoptotic process","type":"exact"},{"name":"inhibition of compound eye retinal cell apoptotic process","type":"narrow"}],"termid":"GO:1901693"}


id: GO:0050120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O + NAD+ = N-acetyl-D-glucosaminate + 2 H+ + NADH.","definition_xrefs":["RHEA:23144","EC:1.1.1.240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N-acetylhexosamine 1-dehydrogenase activity","secondary_identifiers":["MetaCyc:N-ACETYLHEXOSAMINE-1-DEHYDROGENASE-RXN","KEGG_REACTION:R01202"],"synonyms":[{"name":"N-acetyl-D-hexosamine dehydrogenase activity","type":"related"},{"name":"N-acetyl-D-hexosamine:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"N-acetylhexosamine dehydrogenase activity","type":"related"}],"termid":"GO:0050120"}


id: GO:0097037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme out of a cell or organelle.","definition_xrefs":["PMID:15369674","GOC:lf","PMID:20610401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transport","termid":"GO:0015886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"heme export","termid":"GO:0097037"}


id: PBO:0085481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable multiple transmembrane protein; involved in diploid invasive and pseudohyphal growth upon nitrogen starvation; is glycosylated and phosphorylated; interacts with Rim21p and Rim9p in the plasma membrane to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; required for accumulation of processed Rim101p","termid":"PBO:0085481"}


id: GO:0098802
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the plasma membrane and which functions as a signaling receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"plasma membrane signaling receptor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098802","terms_by_termid":{"GO:0038038":null}}


id: GO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules.","definition_xrefs":["GOC:mah","PMID:27573892"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA processing (obsolete GO:0034470)","termid":"GO:0034470"}


id: PBO:0070702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 6","termid":"PBO:0070702"}


id: GO:0010317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Refers to the alpha subunit of the heterodimeric complex that possesses pyrophosphate-dependent phosphofructokinase activity.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"pyrophosphate-dependent phosphofructokinase complex","termid":"GO:0010316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex","synonyms":[{"name":"PFK complex, alpha-subunit","type":"related"}],"termid":"GO:0010317"}


id: GO:0043598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic complex of two polypeptides that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase. Examples of this component are found in prokaryotic species.","definition_xrefs":["PMID:14646196","PMID:16172520","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication factor C complex","termid":"GO:0005663"},{"relation_name":"part_of","term_name":"cytoplasmic replisome","termid":"GO:0043600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic DNA replication factor C complex","synonyms":[{"name":"cytoplasmic RFC","type":"exact"},{"name":"cytoplasmic clamp loader","type":"exact"}],"termid":"GO:0043598"}


id: GO:0032122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the oral apparatus. The oral apparatus is a funnel-like structure used by the cell to collect food and channel it to the cytostome, characteristic of ciliate protozoans.","definition_xrefs":["PMID:10503189","PMID:6414830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral apparatus organization","synonyms":[{"name":"oral apparatus morphogenesis","type":"related"},{"name":"oral apparatus organisation","type":"exact"},{"name":"oral apparatus organization and biogenesis","type":"related"},{"name":"stomatogenesis","type":"related"}],"termid":"GO:0032122"}


id: GO:0009155
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"deoxyribonucleotide catabolic process","termid":"GO:0009264"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide breakdown","type":"exact"},{"name":"purine deoxyribonucleotide catabolism","type":"exact"},{"name":"purine deoxyribonucleotide degradation","type":"exact"}],"termid":"GO:0009155","terms_by_termid":{"GO:0035863":null}}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: PBO:0038724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 19","termid":"PBO:0038724"}


id: PBO:0071156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 21","termid":"PBO:0071156"}


id: GO:2000734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000733"},{"relation_name":"negatively_regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"negative regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000734"}


id: GO:1905235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quercetin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24914722","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to quercetin","termid":"GO:1905235"}


id: PBO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 2","termid":"PBO:0080065"}


id: PBO:0036325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic kinetochore protein (Meikin) Moa1","termid":"PBO:0036325"}


id: PBO:0090800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex cyclin Mcs2","termid":"PBO:0090800"}


id: PBO:0072380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 6","termid":"PBO:0072380"}


id: MOD:01122
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dCytidinyl","termid":"MOD:01122"}


id: PBO:0069337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 597, pseudogene","termid":"PBO:0069337"}


id: PBO:0034119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pollinated_by","termid":"PBO:0034119"}


id: FYPO:0005358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal site-specific DNA replication termination at RTS1 barrier","termid":"FYPO:0005355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"increased site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"increased site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005358"}


id: GO:0000406
data:
  {"annotated_genes":["SJAG_01076","SJAG_02226","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96764,102254,112988],"is_not":false,"summary":null,"term":"GO:0000406"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment that contains double-stranded DNA flanked by a region of single-stranded DNA.","definition_xrefs":["PMID:16781730","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"double-strand/single-strand DNA junction binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000406","terms_by_termid":{"GO:0000406":null}}


id: GO:0045888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription of homeotic genes of the Polycomb group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription of homeotic gene (Polycomb group) (obsolete GO:0045888)","synonyms":[{"name":"regulation of transcription of homeotic gene (Polycomb group)","type":"exact"}],"termid":"GO:0045888"}


id: GO:0009809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lignins, a class of polymers formed by the dehydrogenetive radical polymerization of various phenylpropanoid monomers.","definition_xrefs":["GOC:tair_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-361"],"synonyms":[{"name":"lignin anabolism","type":"exact"},{"name":"lignin biosynthesis","type":"exact"},{"name":"lignin formation","type":"exact"},{"name":"lignin synthesis","type":"exact"}],"termid":"GO:0009809"}


id: FYPO:0004595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex assembly","synonyms":[{"name":"abnormal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004595"}


id: PBO:0077556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 263","termid":"PBO:0077556"}


id: GO:0052627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vanillate + ATP + amino acid = vanillate amino acid conjugate + AMP + diphosphate.","definition_xrefs":["MetaCyc:RXN-10885","PMID:19189963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"vanillate amino acid synthetase activity","termid":"GO:0052627"}


id: RO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Is_bouton_to","termid":"RO:0002106"}


id: GO:0098666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of G protein-coupled serotonin receptor activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor complex","synonyms":[{"name":"G-protein coupled serotonin receptor complex","type":"exact"}],"termid":"GO:0098666"}


id: PBO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 3","termid":"PBO:0050912"}


id: GO:0050509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP.","definition_xrefs":["EC:2.4.1.225","MetaCyc:2.4.1.225-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity","secondary_identifiers":["RHEA:20908","Reactome:R-HSA-9036289","Reactome:R-HSA-2022856","Reactome:R-HSA-2076392","Reactome:R-HSA-3656257","Reactome:R-HSA-9036285","Reactome:R-HSA-3656267"],"synonyms":[{"name":"N-acetylglucosaminyl-proteoglycan 4-b-glucuronosyltransferase activity","type":"exact"},{"name":"N-acetylglucosaminylproteoglycan beta-1,4-glucuronyltransferase activity","type":"related"},{"name":"UDP-alpha-D-glucuronate:N-acetyl-alpha-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 4-beta-glucuronosyltransferase activity","type":"related"},{"name":"heparan glucuronyltransferase II activity","type":"related"}],"termid":"GO:0050509"}


id: GO:0015415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphate(out) = ADP + phosphate + phosphate(in).","definition_xrefs":["EC:7.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled phosphate ion transmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-27-RXN","RHEA:24440"],"synonyms":[{"name":"ABC phosphate transporter activity","type":"narrow"},{"name":"ATP phosphohydrolase (phosphate-importing)","type":"related"},{"name":"phosphate ABC transporter","type":"narrow"},{"name":"phosphate ion transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphate porter activity","type":"exact"},{"name":"phosphate transporting ATPase activity","type":"exact"},{"name":"phosphate-transporting ATPase activity","type":"related"}],"termid":"GO:0015415"}


id: PBO:0026667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_mononucleate_vegetative_cell","termid":"PBO:0026667"}


id: PBO:0083823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Dam1p and Pse1p to connect the DASH complex with microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083823"}


id: GO:0015417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + polyamine(out) = ADP + phosphate + polyamine(in).","definition_xrefs":["RHEA:29999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type polyamine transporter activity","secondary_identifiers":["GO:0015595","EC:7.6.2.11","MetaCyc:3.6.3.31-RXN"],"synonyms":[{"name":"ATP-dependent polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled spermidine transmembrane transporter activity","type":"narrow"},{"name":"polyamine ABC transporter","type":"narrow"},{"name":"polyamine porter activity","type":"broad"},{"name":"polyamine-importing ATPase activity","type":"narrow"},{"name":"polyamine-transporting ATPase activity","type":"related"},{"name":"spermidine porter activity","type":"narrow"},{"name":"spermidine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015417"}


id: PBO:0073299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 21","termid":"PBO:0073299"}


id: PBO:0034130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mutualistically_interacts_with","termid":"PBO:0034130"}


id: PATO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's origin or development at an unusual time or out of the regular sequence.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochronic","termid":"PATO:0000692"}


id: PBO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 47","termid":"PBO:0071628"}


id: GO:1901031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to reactive oxygen species","synonyms":[{"name":"regulation of response to AOS","type":"exact"},{"name":"regulation of response to ROI","type":"exact"},{"name":"regulation of response to ROS","type":"exact"},{"name":"regulation of response to active oxygen species","type":"exact"},{"name":"regulation of response to reactive oxidative species","type":"exact"},{"name":"regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901031"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: PBO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD1 antisense RNA 1","termid":"PBO:0046364"}


id: PBO:0053745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 972","termid":"PBO:0053745"}


id: GO:1901609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"negatively_regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of vesicle transport along microtubule","synonyms":[{"name":"down regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down regulation of vesicle transport along microtubule","type":"exact"},{"name":"down-regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down-regulation of vesicle transport along microtubule","type":"exact"},{"name":"downregulation of microtubule-based vesicle localization","type":"exact"},{"name":"downregulation of vesicle transport along microtubule","type":"exact"},{"name":"inhibition of microtubule-based vesicle localization","type":"exact"},{"name":"inhibition of vesicle transport along microtubule","type":"narrow"},{"name":"negative regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901609"}


id: FYPO:0004411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing oxaliplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on oxaliplatin","synonyms":[{"name":"normal cell population growth in presence of oxaliplatin","type":"exact"},{"name":"normal cell population growth on oxaliplatin","type":"exact"},{"name":"normal cellular response to oxaliplatin","type":"related"},{"name":"normal vegetative cell population growth on oxaliplatin","type":"exact"}],"termid":"FYPO:0004411"}


id: PATO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's lacking a processual part as specified by the additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacking processual parts","termid":"PATO:0001558"}


id: GO:1904798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of core promoter binding.","definition_xrefs":["PMID:22723415","GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","GO_REF:0000059","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of core promoter binding","synonyms":[{"name":"activation of core promoter binding","type":"narrow"},{"name":"up regulation of core promoter binding","type":"exact"},{"name":"up-regulation of core promoter binding","type":"exact"},{"name":"upregulation of core promoter binding","type":"exact"}],"termid":"GO:1904798"}


id: PBO:0063059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter of CDKN1A antisense DNA damage activated RNA","termid":"PBO:0063059"}


id: FYPO:0003532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the monopolar index is higher than normal. The monopolar index is the proportion of the population undergoing monopolar growth at any given time.","definition_xrefs":["PomBase:mah","PMID:20501954","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"output_of","term_name":"decreased NETO","termid":"FYPO:0003150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0005568","FYPO:0001985","FYPO:0001320","FYPO:0000003"],"is_obsolete":false,"name":"increased monopolar index","synonyms":[{"name":"increased frequency of monopolar growth polarity","type":"related"},{"name":"increased number of cells undergoing monopolar growth","type":"exact"}],"termid":"FYPO:0003532"}


id: PBO:0074779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 1","termid":"PBO:0074779"}


id: GO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenylcysteine metabolic process","termid":"GO:0030329"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine catabolic process","synonyms":[{"name":"prenylcysteine breakdown","type":"exact"},{"name":"prenylcysteine catabolism","type":"exact"},{"name":"prenylcysteine degradation","type":"exact"}],"termid":"GO:0030328"}


id: GO:0070412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor-regulated SMAD signaling protein.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:19114992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"R-SMAD binding","synonyms":[{"name":"pathway restricted SMAD binding","type":"exact"},{"name":"pathway-restricted SMAD binding","type":"exact"},{"name":"receptor regulated SMAD binding","type":"exact"},{"name":"receptor-regulated SMAD binding","type":"exact"}],"termid":"GO:0070412"}


id: GO:0017154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a semaphorin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:15239958","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"semaphorin receptor activity","termid":"GO:0017154"}


id: FYPO:0005134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to micafungin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to micafungin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to micafungin","type":"exact"}],"termid":"FYPO:0005134"}


id: PBO:0067061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 83, pseudogene","termid":"PBO:0067061"}


id: GO:0035225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of embryonic cells to the genital imaginal disc founder populations. Early in development at the blastoderm stage, the anlage of the genital disc of both sexes consists of three primordia: the female genital primoridum lcoated anteriorly, the anal primoridum located posteriorly, and the male gential primordium between the two.","definition_xrefs":["GOC:bf","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of imaginal disc primordium","termid":"GO:0007445"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of genital disc primordium","termid":"GO:0035225"}


id: GO:0010179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetyl-alanine + H2O = indole-3-acetate + L-alanine.","definition_xrefs":["MetaCyc:RXN-2981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"IAA-Ala conjugate hydrolase activity","termid":"GO:0010179"}


id: GO:0015478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oligosaccharide, sized less than 1000 Da, from one side of a membrane to the other. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transmembrane transporter activity","termid":"GO:0015157"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide transporting porin activity","synonyms":[{"name":"raffinose porin","type":"narrow"}],"termid":"GO:0015478"}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: PBO:0005472
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthetic Lethal with Rad2 mutant","termid":"PBO:0005472"}


id: PBO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4-dienoyl-CoA reductase 1","termid":"PBO:0044781"}


id: PBO:0072009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 11","termid":"PBO:0072009"}


id: PBO:0058541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6086","termid":"PBO:0058541"}


id: PBO:0061856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 1","termid":"PBO:0061856"}


id: FYPO:0007970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a higher rate, or speed, than normal.","definition_xrefs":["PomBase:mlr","PMID:35293864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}


id: PBO:0060221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 4","termid":"PBO:0060221"}


id: GO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + H2O + O2 = 6-amino-2-oxohexanoate + H2O2 + NH4.","definition_xrefs":["EC:1.4.3.14","RHEA:14437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-lysine oxidase activity","secondary_identifiers":["MetaCyc:L-LYSINE-OXIDASE-RXN","MetaCyc:PWY-5311","KEGG_REACTION:R00447"],"synonyms":[{"name":"L-lysine alpha-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (deaminating)","type":"related"},{"name":"L-lysyl-alpha-oxidase activity","type":"related"}],"termid":"GO:0050029"}


id: GO:1903826
data:
  {"annotated_genes":["SJAG_02716","SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62801,95011],"is_not":false,"summary":null,"term":"GO:1903826"},{"annotations":[100023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:18357653","PMID:22822152","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-arginine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1903400","GO:0015809","GO:0043091","GO:1902023"],"synonyms":[{"name":"L-arginine import","type":"narrow"},{"name":"L-arginine transport","type":"broad"},{"name":"L-arginine uptake","type":"narrow"},{"name":"arginine transmembrane transport","type":"related"},{"name":"arginine transport","type":"broad"}],"termid":"GO:1903826","terms_by_termid":{"GO:0090518":null,"GO:1903826":null}}


id: PR:Q9UTA3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A minor histocompatibility antigen H13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12174:SF23","PRO:DNx","OMA:SCHPO01737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramembrane protease C25B8.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.17","secondary_identifiers":["UniProtKB:Q9UTA3"],"synonyms":[{"name":"Spom972h-HM13","type":"exact"}],"termid":"PR:Q9UTA3"}


id: PBO:0087978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase; adds a guanosine residue to the 5' end of tRNAH is after transcription and RNase P cleavage; can also catalyze reverse (3'-5') polymerization with certain substrates in a template-dependent reaction; couples nuclear division and migration to cell budding and cytokinesis; essential enzyme conserved among eukaryotes","termid":"PBO:0087978"}


id: GO:0010693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"},{"relation_name":"is_a","term_name":"negative regulation of phosphatase activity","termid":"GO:0010923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of alkaline phosphatase activity","termid":"GO:0010693"}


id: GO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:mtg_muscle","GOC:jl","UBERON:0001046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut contraction","termid":"GO:0043133"}


id: PBO:0074468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3B","termid":"PBO:0074468"}


id: GO:0043752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RTP + adenosylcobinamide = adenosylcobinamide phosphate + RDP (where RTP is either ATP or GTP).","definition_xrefs":["EC:2.7.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"adenosylcobinamide kinase activity","secondary_identifiers":["MetaCyc:2.7.1.156-RXN"],"synonyms":[{"name":"AdoCbi kinase/AdoCbi-phosphate guanylyltransferase","type":"broad"},{"name":"CobU","type":"related"},{"name":"RTP:adenosylcobinamide phosphotransferase activity","type":"exact"},{"name":"adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase","type":"broad"}],"termid":"GO:0043752"}


id: PBO:0041473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 52","termid":"PBO:0041473"}


id: PBO:0003326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec27","termid":"PBO:0003326"}


id: GO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an epidermal growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0038023","GO:0003674","GO:0004672","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"epidermal growth factor receptor activity","secondary_identifiers":["GO:0005023"],"synonyms":[{"name":"EGF receptor activity","type":"exact"},{"name":"EGFR","type":"exact"},{"name":"TGF-alpha receptor activity","type":"exact"},{"name":"epidermal growth factor-activated receptor activity","type":"exact"},{"name":"transforming growth factor-alpha receptor activity","type":"exact"}],"termid":"GO:0005006"}


id: FYPO:0004871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a 2-oxoglutarate-dependent dioxygenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal dioxygenase activity","termid":"FYPO:0004364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal 2-oxoglutarate dioxygenase activity","synonyms":[{"name":"abnormal 2-oxoglutarate-dependent dioxygenase activity","type":"exact"},{"name":"abnormal oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"}],"termid":"FYPO:0004871"}


id: PBO:0043599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVIII alpha 1 chain","termid":"PBO:0043599"}


id: GO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + O2 = acetate + CO2 + H2O.","definition_xrefs":["EC:1.13.12.4","RHEA:16513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"lactate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00319","MetaCyc:LACTATE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(S)-lactate:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"L-lactate monooxygenase activity","type":"related"},{"name":"L-lactate-2-monooxygenase activity","type":"related"},{"name":"lactate monooxygenase activity","type":"related"},{"name":"lactate oxidase activity","type":"related"},{"name":"lactate oxidative decarboxylase activity","type":"related"},{"name":"lactate oxygenase activity","type":"related"},{"name":"lactic oxidase activity","type":"related"},{"name":"lactic oxygenase activity","type":"related"}],"termid":"GO:0050040"}


id: GO:0043716
data:
  {"annotated_genes":["SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95204],"is_not":false,"summary":null,"term":"GO:0043716"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate + H2O = 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + phosphate. 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate is also known as HK-MTPenyl-P, and 1,2-dihydroxy-3-keto-5-methylthiopentene as DHK-MTPene.","definition_xrefs":["MetaCyc:R83-RXN","EC:3.1.3.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R07394","RHEA:14481"],"synonyms":[{"name":"2-hydroxy-3-keto-5-methylthio-phosphopentene phosphatase activity","type":"exact"},{"name":"HK-MTPenyl-1-P phosphatase activity","type":"exact"}],"termid":"GO:0043716","terms_by_termid":{"GO:0043716":null}}


id: GO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.6","RHEA:10012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-6-hydroxynicotine oxidase activity","secondary_identifiers":["KEGG_REACTION:R07170","MetaCyc:R-6-HYDROXYNICOTINE-OXIDASE-RXN","UM-BBD_reactionID:r0477"],"synonyms":[{"name":"(R)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-D-nicotine oxidase activity","type":"exact"},{"name":"D-6-hydroxynicotine oxidase activity","type":"related"}],"termid":"GO:0018530"}


id: PBO:0111521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 1","termid":"PBO:0111521"}


id: PBO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RTS1","termid":"PBO:0017584"}


id: PBO:0073394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 9","termid":"PBO:0073394"}


id: FYPO:0002538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleoplasm","termid":"FYPO:0002531"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during cellular response to hydroxyurea","termid":"FYPO:0004188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002538"}


id: GO:0070782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the outer leaflet of the plasma membrane of an apoptotic cell, which acts as an 'eat-me' signal for engulfing cells. Phosphatidylserine is exposed on the apoptotic cell surface by a phospholipid scramblase activity.","definition_xrefs":["PMID:11536005","GOC:mtg_apoptosis","GOC:rk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"part_of","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"externalization of phosphatidylserine","type":"exact"}],"termid":"GO:0070782"}


id: GO:0010618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to aerenchyma, parenchyma tissue containing particularly large intercellular spaces of schizogenous or lysigenous origin. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PO:0005702","PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerenchyma formation","termid":"GO:0010618"}


id: GO:0033879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 17-O-acetylajmaline + H2O = ajmaline + acetate, and 17-O-acetylnorajmaline + H2O = norajmaline + acetate.","definition_xrefs":["EC:3.1.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"acetylajmaline esterase activity","secondary_identifiers":["MetaCyc:RXN-8220","MetaCyc:RXN-8222"],"synonyms":[{"name":"17-O-acetylajmaline O-acetylhydrolase activity","type":"related"},{"name":"2beta(R)-17-O-acetylajmalan:acetylesterase activity","type":"related"},{"name":"AAE","type":"related"},{"name":"acetylajmalan esterase activity","type":"related"}],"termid":"GO:0033879"}


id: GO:1903929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a primary palate over time, from its formation to the mature structure.","definition_xrefs":["GOC:mgi_curators","GO_REF:0000094","PMID:25504820","GOC:TermGenie","PMID:24644145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary palate development","synonyms":[{"name":"palatum primarium development","type":"related"},{"name":"primary palate process development","type":"exact"},{"name":"primitive palate development","type":"related"},{"name":"processus palatinus medianus development","type":"related"}],"termid":"GO:1903929"}


id: GO:0102420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + 1-C16:0-alpha,omega-dicarboxyl-2-lysophosphatidate.","definition_xrefs":["GOC:pz","EC:2.3.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity","secondary_identifiers":["MetaCyc:RXN-13805"],"termid":"GO:0102420"}


id: GO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + malonyl-CoA = N-malonylanthranilate + CoA.","definition_xrefs":["RHEA:17557","EC:2.3.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"anthranilate N-malonyltransferase activity","secondary_identifiers":["MetaCyc:ANTHRANILATE-N-MALONYLTRANSFERASE-RXN","KEGG_REACTION:R00989"],"synonyms":[{"name":"malonyl-CoA:anthranilate N-malonyltransferase activity","type":"related"}],"termid":"GO:0047673"}


id: GO:0010326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methionine + a 2-oxo acid = 2-oxo-4-methylthiobutanoate + an amino acid.","definition_xrefs":["MetaCyc:RXN-2201","PMID:17056707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"methionine-oxo-acid transaminase activity","secondary_identifiers":["MetaCyc:R15-RXN"],"termid":"GO:0010326"}


id: PBO:0005040
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked myopathy with excessive autophagy","termid":"PBO:0005040"}


id: PBO:0072097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 28","termid":"PBO:0072097"}


id: PBO:0056981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30a","termid":"PBO:0056981"}


id: GO:0086092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cardiac conduction process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"},{"relation_name":"is_a","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by cardiac conduction","termid":"GO:0086092"}


id: PBO:0072845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2","termid":"PBO:0072845"}


id: PBO:0067019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 32, pseudogene","termid":"PBO:0067019"}


id: SO:1001186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001186 sequence_variant_causing_cryptic_splice_acceptor_activation (obsolete SO:1001186)","synonyms":[{"name":"sequence variant causing cryptic splice acceptor activation","type":"exact"}],"termid":"SO:1001186"}


id: PBO:0003486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic ring-opening dioxygenase (predicted)","termid":"PBO:0003486"}


id: PBO:0017843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine transmembrane transporter (predicted)","termid":"PBO:0017843"}


id: GO:0050939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of early stripe melanocyte differentiation","synonyms":[{"name":"regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050939"}


id: GO:0046969
data:
  {"annotated_genes":["SJAG_04186","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100385,110609],"is_not":false,"summary":null,"term":"GO:0046969"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K9 deacetylase activity","termid":"GO:0032129"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019213","GO:0140096","GO:0033558","GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"NAD-dependent histone H3K9 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9604829"],"synonyms":[{"name":"NAD-dependent H3-K9 histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0046969","terms_by_termid":{"GO:0046969":null}}


id: GO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction by changing the calcium ion signals that trigger contraction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction by calcium ion signaling","synonyms":[{"name":"regulation of cardiac muscle contraction by calcium ion signalling","type":"exact"}],"termid":"GO:0010882"}


id: PBO:0075904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5","termid":"PBO:0075904"}


id: GO:0019498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of n-octane to octanoyl-CoA.","definition_xrefs":["MetaCyc:P221-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"n-octane metabolic process","termid":"GO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"n-octane oxidation","termid":"GO:0019498"}


id: PBO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_nitrogen_starvation","termid":"PBO:0030732"}


id: PBO:0054733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2142","termid":"PBO:0054733"}


id: GO:0052542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"defense response by callose deposition","synonyms":[{"name":"callose deposition during defense response","type":"related"},{"name":"callose localization during defense response","type":"related"}],"termid":"GO:0052542"}


id: PBO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subcellular_component_during_vegetative_growth","termid":"PBO:0030919"}


id: PBO:0070203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 128 pseudogene","termid":"PBO:0070203"}


id: FYPO:0000425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of endocytosis is increased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased endocytosis during vegetative growth","synonyms":[{"name":"endocytosis: increased during vegetative growth","type":"related"},{"name":"increased actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"increased endocytosis during mitotic cell cycle","type":"related"},{"name":"increased protein internalization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000425"}


id: GO:0010428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a methylated cytosine/unspecified/guanine trinucleotide.","definition_xrefs":["PMID:17239600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"methyl-CpNpG binding","termid":"GO:0010428"}


id: GO:0031436
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex comprising BRCA1 and BARD1, which possesses ubiquitin ligase activity and is involved in genome maintenance, possibly by functioning in surveillance for DNA damage.","definition_xrefs":["PMID:12787778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"BRCA1-BARD1 complex","termid":"GO:0031436"}


id: PBO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1 pseudogene 1","termid":"PBO:0043308"}


id: PBO:0029726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis_resulting_in_septated_cell","termid":"PBO:0029726"}


id: GO:0036366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of transforming growth factor beta 3 (TGF-beta3) from its latent state.","definition_xrefs":["GOC:sl","PMID:9170210","PMID:12482908"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta3 activation (obsolete GO:0036366)","synonyms":[{"name":"TGF-beta 3 activation","type":"exact"},{"name":"TGFB3 activation","type":"exact"},{"name":"TGFbeta 3 activation","type":"exact"}],"termid":"GO:0036366"}


id: PBO:0054218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1599","termid":"PBO:0054218"}


id: GO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the semicircular canal from the otic vesicle. This process begins with the regionalization of the vesicle that specifies the area where the vesicles will form and continues through the process of fusion which forms the initial tubes.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"},{"relation_name":"part_of","term_name":"semicircular canal morphogenesis","termid":"GO:0048752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal formation","termid":"GO:0060876"}


id: PBO:0055482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2915","termid":"PBO:0055482"}


id: GO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continual breakdown and regeneration of peptidoglycan required to maintain the cell wall.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan turnover","secondary_identifiers":["GO:0009287"],"synonyms":[{"name":"murein turnover","type":"exact"}],"termid":"GO:0009254"}


id: PBO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin","termid":"PBO:0044226"}


id: GO:0007409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["GOC:dph","ISBN:0198506732","GOC:pr","GOC:jid","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis","secondary_identifiers":["GO:0007410"],"synonyms":[{"name":"axon growth","type":"narrow"},{"name":"axon morphogenesis","type":"exact"},{"name":"neuron long process generation","type":"exact"}],"termid":"GO:0007409"}


id: GO:1903642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of recombination hotspot binding.","definition_xrefs":["GO_REF:0000059","PMID:19436749","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of recombination hotspot binding","synonyms":[{"name":"regulation of DNA binding, recombination hotspot","type":"exact"}],"termid":"GO:1903642"}


id: FYPO:0005648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which sister kinetochores separate during the first meiotic nuclear division. Normally sister kinetochores remain together until meiosis II.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I","synonyms":[{"name":"decreased meiosis I sister kinetochore fusion","type":"narrow"},{"name":"decreased meiotic sister kinetochore association in meiotic metaphase I","type":"exact"},{"name":"precocious centromeric dissociation during meiosis I","type":"exact"},{"name":"premature sister kinetochore separation during meiosis I","type":"exact"},{"name":"sister kinetochore separation during first meiotic nuclear division","type":"exact"},{"name":"sister kinetochore separation during meiosis I","type":"exact"},{"name":"split kinetochores during meiosis I","type":"related"}],"termid":"FYPO:0005648"}


id: PBO:0031153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_myo-inositol_import","termid":"PBO:0031153"}


id: PR:Q9C0Z0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Z0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease PB24D3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.02c","synonyms":[{"name":"Spom972h-SPAPB24D3.02c","type":"exact"}],"termid":"PR:Q9C0Z0"}


id: PBO:0076600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 22A","termid":"PBO:0076600"}


id: PBO:0066921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 223","termid":"PBO:0066921"}


id: PBO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-4","termid":"PBO:0075041"}


id: PR:O94341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.08c gene.","definition_xrefs":["UniProtKB:O94341","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1271.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.08c","synonyms":[{"name":"Spom972h-SPBC1271.08c","type":"exact"}],"termid":"PR:O94341"}


id: GO:0033826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose on to a glucose residue in xyloglucan, forming a beta-1,4-D-glucosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.1.168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xyloglucan 4-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12419"],"synonyms":[{"name":"UDP-glucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-xyloglucan 4beta-glucosyltransferase activity","type":"related"},{"name":"xyloglucan 4beta-D-glucosyltransferase activity","type":"related"},{"name":"xyloglucan glucosyltransferase activity","type":"related"}],"termid":"GO:0033826"}


id: PBO:0110022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mitochondrial tRNA 5'-end processing protein Rrg8","termid":"PBO:0110022"}


id: _global:hyperparasitized_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of hyperparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasitized_by","secondary_identifiers":["RO:0002554"],"synonyms":[{"name":"has epiparasite","type":"related"},{"name":"has hyperparasite","type":"related"},{"name":"hyperparasitoidized by","type":"related"}],"termid":"_global:hyperparasitized_by"}


id: PR:Q10064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra2 gene.","definition_xrefs":["UniProtKB:Q10064","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PI3/PI4-kinase family protein C1F5.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.11c","synonyms":[{"name":"Spom972h-tra2","type":"exact"}],"termid":"PR:Q10064"}


id: PATO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality held by the bearer when the latter is able to perform a regular function(s).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional","termid":"PATO:0001510"}


id: FYPO:0006959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of succinate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular succinate level","synonyms":[{"name":"increased cellular succinate level during mitotic cell cycle","type":"related"},{"name":"increased cellular succinate level during vegetative growth","type":"exact"},{"name":"increased cellular succinate(2-) level","type":"exact"},{"name":"increased succinate accumulation","type":"related"}],"termid":"FYPO:0006959"}


id: PR:000050251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PomBase:MAH","PRO:DAN","PMID:26960792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho2</GTP+","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"Spom-rho2/GTP+","type":"exact"},{"name":"rho2</GTP+","type":"exact"}],"termid":"PR:000050251"}


id: GO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of juvenile hormone metabolic process","termid":"GO:0045928"},{"relation_name":"is_a","term_name":"regulation of juvenile hormone catabolic process","termid":"GO:0045952"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone catabolic process","termid":"GO:0006719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"negative regulation of juvenile hormone catabolic process","synonyms":[{"name":"down regulation of juvenile hormone catabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone catabolic process","type":"exact"},{"name":"downregulation of juvenile hormone catabolic process","type":"exact"},{"name":"inhibition of juvenile hormone catabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone breakdown","type":"exact"},{"name":"negative regulation of juvenile hormone catabolism","type":"exact"},{"name":"negative regulation of juvenile hormone degradation","type":"exact"}],"termid":"GO:0045970"}


id: PBO:0058619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6751","termid":"PBO:0058619"}


id: GO:0000348
data:
  {"annotated_genes":["SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99399],"is_not":false,"summary":null,"term":"GO:0000348"}]},"cv_name":"biological_process","definition":"Recognition of the pre-mRNA branch site sequence by components of the assembling spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0065003","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"mRNA branch site recognition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000371","GO:0000370"],"synonyms":[{"name":"U12-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"nuclear mRNA branch site recognition","type":"exact"},{"name":"spliceosomal A complex biosynthesis","type":"narrow"},{"name":"spliceosomal A complex formation","type":"narrow"},{"name":"spliceosomal B complex biosynthesis","type":"narrow"},{"name":"spliceosomal B complex formation","type":"narrow"}],"termid":"GO:0000348","terms_by_termid":{"GO:0000348":null}}


id: PBO:0067594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 756, pseudogene","termid":"PBO:0067594"}


id: PBO:0071635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 54","termid":"PBO:0071635"}


id: FYPO:0006032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during mitotic DNA replication.","definition_xrefs":["PMID:28481910","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin during mitotic DNA replication","synonyms":[{"name":"decreased protein localisation to chromatin during mitotic DNA replication","type":"exact"},{"name":"decreased protein localization to chromatin during DNA replication during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin during DNA replication during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin during mitotic DNA replication","type":"exact"}],"termid":"FYPO:0006032"}


id: MOD:01138
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aedans Cystenyl","termid":"MOD:01138"}


id: PBO:0078497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 1-1","termid":"PBO:0078497"}


id: GO:0042933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"chrysobactin transmembrane transporter activity","synonyms":[{"name":"chrysobactin transporter activity","type":"related"}],"termid":"GO:0042933"}


id: PBO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Gnr1","termid":"PBO:0005272"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: GO:1902280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ATP-dependent RNA helicase activity.","definition_xrefs":["PMID:23721653","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of helicase activity","termid":"GO:0051095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA helicase activity","synonyms":[{"name":"regulation of ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:1902280"}


id: FYECO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature, transferred to standard, and then to high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-step temperature shift, low to standard, standard to high","termid":"FYECO:0000295"}


id: GO:0008270
data:
  {"annotated_genes":["SJAG_04373","SJAG_01776","SJAG_06576","SJAG_02169","SJAG_06642","SJAG_02290","SJAG_04726","SJAG_00439","SJAG_02349","SJAG_00758","SJAG_01511","SJAG_03697","SJAG_01533","SJAG_02938","SJAG_00451","SJAG_04619","SJAG_05242","SJAG_01321","SJAG_03275","SJAG_01075","SJAG_00237","SJAG_04129","SJAG_01313","SJAG_00577","SJAG_04048","SJAG_04915","SJAG_03968","SJAG_04425","SJAG_03153","SJAG_03886","SJAG_00926","SJAG_02589","SJAG_04353","SJAG_00742","SJAG_03983","SJAG_01797","SJAG_03618","SJAG_02503","SJAG_01997","SJAG_04991","SJAG_02752","SJAG_02299","SJAG_01740","SJAG_03006","SJAG_02043","SJAG_02709","SJAG_06597","SJAG_01930","SJAG_01593","SJAG_03974","SJAG_04374","SJAG_03196","SJAG_02096","SJAG_00037","SJAG_00406","SJAG_03022","SJAG_00483","SJAG_00552","SJAG_00555","SJAG_03976","SJAG_03831","SJAG_03761","SJAG_04410","SJAG_03370","SJAG_04213","SJAG_02954","SJAG_05273","SJAG_01165","SJAG_03918","SJAG_03373","SJAG_03752","SJAG_02539","SJAG_05344","SJAG_04407","SJAG_03689","SJAG_04151","SJAG_05243","SJAG_01507","SJAG_02298","SJAG_00111","SJAG_01765","SJAG_00163","SJAG_01572","SJAG_03615","SJAG_02851","SJAG_03183","SJAG_00792","SJAG_05353","SJAG_04205","SJAG_02575","SJAG_01372","SJAG_02149","SJAG_00188","SJAG_03665","SJAG_03324","SJAG_02689","SJAG_03346","SJAG_05274","SJAG_04448","SJAG_05345","SJAG_01673","SJAG_04845","SJAG_03225","SJAG_04043","SJAG_06599","SJAG_01194","SJAG_00166","SJAG_02691","SJAG_03071","SJAG_00727","SJAG_05173","SJAG_00923","SJAG_03175","SJAG_01310","SJAG_00386","SJAG_02746","SJAG_03519","SJAG_02052","SJAG_01450","SJAG_03984","SJAG_00475","SJAG_01414","SJAG_05012","SJAG_02347","SJAG_06639","SJAG_02447","SJAG_02406","SJAG_04538","SJAG_03613","SJAG_03051","SJAG_05118","SJAG_01281","SJAG_00664","SJAG_01253","SJAG_04336","SJAG_01179","SJAG_01088","SJAG_05337","SJAG_03005","SJAG_00249","SJAG_04712","SJAG_00072","SJAG_01992","SJAG_02629","SJAG_03112","SJAG_00989","SJAG_04434","SJAG_04106","SJAG_01560","SJAG_04189","SJAG_02956","SJAG_03599","SJAG_00119","SJAG_02048","SJAG_00204","SJAG_03090","SJAG_04429","SJAG_03657","SJAG_04063","SJAG_04249","SJAG_02908","SJAG_01457","SJAG_03771","SJAG_04574","SJAG_03538","SJAG_03286","SJAG_05264","SJAG_02461","SJAG_05234","SJAG_00341","SJAG_05105","SJAG_03326","SJAG_02963","SJAG_03254","SJAG_02521","SJAG_02648","SJAG_02668","SJAG_00561","SJAG_02730","SJAG_02138","SJAG_04533","SJAG_04414","SJAG_01212","SJAG_00498","SJAG_04966","SJAG_00509","SJAG_01498","SJAG_01266","SJAG_00209","SJAG_01280","SJAG_01854","SJAG_02003","SJAG_00500","SJAG_04990","SJAG_03428","SJAG_02583","SJAG_00181","SJAG_01637","SJAG_06611","SJAG_00865","SJAG_03695","SJAG_05343","SJAG_02569","SJAG_03142","SJAG_02319","SJAG_02007","SJAG_03029","SJAG_03430","SJAG_01772","SJAG_05236","SJAG_00644"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57119,57443,57894,58298,58527,60999,61372,65544,65571,67667,68098,70554,74139,83646,83847,84277,84565,84652,84708,84743,84820,84856,84875,84885,85137,85275,85433,85534,85573,85754,85775,85827,85951,85983,86035,86123,86411,86437,86477,86533,86776,86814,86952,87188,87740,87841,87845,88071,88179,88244,88674,88849,88865,88948,88949,88950,88951,89221,89516,89563,89774,89930,90278,90341,90411,90553,90716,91209,91927,92017,92247,92718,92802,92888,92984,93130,93731,93732,93733,93734,93735,94041,94510,94701,94725,94737,94768,95445,95581,95587,95683,96303,96435,96851,97368,97489,97506,97507,97643,97673,97884,97964,98397,98408,98419,98516,98766,98983,99215,99600,99616,99670,99747,99765,100046,100425,100544,100634,100928,101195,101229,101303,101420,101478,101490,101814,101820,101912,101913,101939,101978,102004,102005,102078,102950,103010,103058,103140,103547,103775,104062,104198,104212,104246,104574,104583,105077,105429,105709,105966,106158,106168,106408,106432,106698,106876,107066,107082,107098,107193,107257,107330,107895,108175,108283,109014,109157,109158,109159,109160,109161,109466,109477,109504,109594,109702,109771,109863,109883,109912,110194,110217,110218,110404,110429,110512,110637,110767,110801,110802,110836,111211,111321,111438,111722,111808,111838,111865,111905,112175,112260,112397,112472,112655,112780,112793,112886,112887,113362,113437,113449,113915,114179,114490,114578,114859,114980,114986],"is_not":false,"summary":null,"term":"GO:0008270"}]},"cv_name":"molecular_function","definition":"Binding to a zinc ion (Zn).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion 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id: GO:0033049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving clavulanic acid, (2R,3Z,5R)-3-(2-hydroxyethylidene)-7-oxo-4-oxa-1-azabicyclo[3.2.0]heptane-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"clavulanic acid metabolic process","synonyms":[{"name":"clavulanic acid metabolism","type":"exact"}],"termid":"GO:0033049"}


id: PBO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1690 family protein","termid":"PBO:0004433"}


id: GO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response by cell wall thickening","termid":"GO:0052482"},{"relation_name":"is_a","term_name":"defense response by callose deposition","termid":"GO:0052542"},{"relation_name":"is_a","term_name":"callose deposition in cell wall","termid":"GO:0052543"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0051179"],"is_obsolete":false,"name":"defense response by callose deposition in cell wall","synonyms":[{"name":"callose deposition in cell wall during defense response","type":"related"},{"name":"callose localization in cell wall during defense response","type":"exact"},{"name":"cell wall callose deposition during defense response","type":"exact"},{"name":"cell wall callose localization during defense response","type":"exact"}],"termid":"GO:0052544"}


id: PBO:0068415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase pseudogene 1","termid":"PBO:0068415"}


id: GO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of the two daughter strands of a duplicated chromosome that become apparent between early prophase and metaphase in mitosis and between diplotene and second metaphase in meiosis.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatid (obsolete GO:0005695)","synonyms":[{"name":"chromatid","type":"exact"}],"termid":"GO:0005695"}


id: GO:0010574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"}


id: GO:0098879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}


id: PBO:0068910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 153, pseudogene","termid":"PBO:0068910"}


id: PBO:0080653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 2","termid":"PBO:0080653"}


id: PBO:0024832
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYosin II of Pombe","termid":"PBO:0024832"}


id: GO:0010479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stele over time, from its formation to the mature structure. The stele is the central column of primary vascular tissue in the root and any tissue that it surrounds.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stele development","termid":"GO:0010479"}


id: FYPO:0006504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell forms two or more shmoos, usually in succession, without fusing with a partner cell. Cell fusion may or may not subsequently occur.","definition_xrefs":["PomBase:mah","PMID:29453312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"multiple shmoo formation","synonyms":[{"name":"formation of multiple mating projections","type":"exact"},{"name":"formation of multiple shmoos","type":"exact"},{"name":"multiple mating projection assembly","type":"exact"}],"termid":"FYPO:0006504"}


id: GO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VII secretion system (obsolete GO:0085013)","termid":"GO:0085013"}


id: GO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgW isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgW immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgW immunoglobulin complex","termid":"GO:0071758"}


id: GO:1904924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitophagy in response to mitochondrial depolarization.","definition_xrefs":["PMID:22020285","GOC:pad","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion in response to mitochondrial depolarization","termid":"GO:1904923"},{"relation_name":"negatively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0007005","GO:0006914"],"is_obsolete":false,"name":"negative regulation of mitophagy in response to mitochondrial depolarization","synonyms":[{"name":"down regulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"down-regulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"downregulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"inhibition of mitophagy in response to mitochondrial depolarization","type":"narrow"}],"termid":"GO:1904924"}


id: GO:0042597
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99163],"is_not":false,"summary":null,"term":"GO:0042597"},{"annotations":[106641,106642,109524,109523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).","definition_xrefs":["GOC:go_curators","GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_02093":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005620"],"synonyms":[{"name":"periplasm","type":"exact"}],"termid":"GO:0042597","terms_by_termid":{"GO:0030287":null,"GO:0042597":null}}


id: MOD:00035
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to (2S,3R)-3-hydroxyasparagine.","definition_xrefs":["RESID:AA0026","PubMed:2820791","PubMed:11823643","ChEBI:141853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxy-L-asparagine","termid":"MOD:01688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R)-3-hydroxyasparagine","synonyms":[{"name":"(2S,3R)-2,4-diamino-3-hydroxy-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-hydroxy-4-butanediamic acid","type":"exact"},{"name":"(2S,3R)-3-hydroxyasparagine","type":"exact"},{"name":"(3R)3HyAsn","type":"exact"},{"name":"2-azanyl-3-hydroxy-4-butanediamic acid","type":"exact"},{"name":"L-erythro-beta-hydroxyasparagine","type":"exact"},{"name":"MOD_RES (3R)-3-hydroxyasparagine","type":"exact"},{"name":"erythro-beta-hydroxylated L-asparagine","type":"exact"}],"termid":"MOD:00035"}


id: PBO:0087234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway; involved in maintenance of cell wall integrity and recovery from heat shock; required for the arrest of secretion response; WSC2 has a paralog, WSC3, that arose from the whole genome duplication","termid":"PBO:0087234"}


id: FYPO:0005705
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115359],"is_not":false,"summary":null,"term":"FYPO:0005705"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability following cellular response to UV","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability following cellular response to UV","type":"exact"},{"name":"loss of cell population viability following cellular response to UV","type":"exact"},{"name":"loss of viability following UV exposure","type":"exact"},{"name":"loss of viability following cellular response to ultraviolet light","type":"exact"},{"name":"reduced viability following cellular response to UV","type":"exact"}],"termid":"FYPO:0005705","terms_by_termid":{"FYECO:0000315":null,"FYPO:0005705":null}}


id: PBO:0077577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 2","termid":"PBO:0077577"}


id: GO:0047191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycero-3-phosphocholine + acyl-CoA = 1-alkyl-2-acyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["EC:2.3.1.63","MetaCyc:2.3.1.63-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-alkylglycerophosphocholine O-acyltransferase activity","secondary_identifiers":["RHEA:23992"],"synonyms":[{"name":"acyl-CoA:1-alkyl-sn-glycero-3-phosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047191"}


id: GO:0044584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellodextrin, a glucose polymer of 2 or more glucose monomers.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:18952792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"},{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellodextrin binding","termid":"GO:0044584"}


id: PBO:0029471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_acid_phosphatase_activity","termid":"PBO:0029471"}


id: GO:0035515
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more nucleosides within a RNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","PMID:12594517","PMID:16482161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491","GO:0140098"],"is_obsolete":false,"name":"oxidative RNA demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8857692"],"synonyms":[{"name":"2-oxoglutarate-dependent RNA demethylase","type":"exact"}],"termid":"GO:0035515","terms_by_termid":{"GO:1990984":null}}


id: PR:Q9P324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.08/SPBC1348.09.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C977.08/C1348.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.09","synonyms":[{"name":"Spom972h-SPBC1348.09","type":"exact"}],"termid":"PR:Q9P324"}


id: PBO:0108944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 1","termid":"PBO:0108944"}


id: GO:0016634
data:
  {"annotated_genes":["SJAG_04944","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[88549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02876":null,"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.3.-"],"termid":"GO:0016634","terms_by_termid":{"GO:0004109":null,"GO:0004729":null}}


id: PBO:0049511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 18","termid":"PBO:0049511"}


id: PBO:0033812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr2 (predicted)","termid":"PBO:0033812"}


id: FYPO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[115696,115725,115717,115722,115711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a chemical stimulus. Resistance to a chemical is usually measured by determining the maximum concentration of the chemical at which a population of cells grow and divide, and cells are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"increased resistance to chemical","termid":"FYPO:0002682"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"increased resistance to chemical during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["pck1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pmk1delta"],"synonyms":[{"name":"increased resistance to chemical during mitotic cell cycle","type":"related"},{"name":"resistance to chemicals: increased during vegetative growth","type":"exact"},{"name":"resistant to chemical during vegetative growth","type":"exact"}],"termid":"FYPO:0000126","terms_by_termid":{"FYPO:0005152":null,"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}


id: PR:Q9UT34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC824.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C824.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.09c","synonyms":[{"name":"Spom972h-SPAC824.09c","type":"exact"}],"termid":"PR:Q9UT34"}


id: MOD:00744
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification containing a molybdenum atom in a pterin ring system.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum containing modified residue","termid":"MOD:00743"},{"relation_name":"is_a","term_name":"pterin modified residue","termid":"MOD:00748"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum pterin containing modification","synonyms":[{"name":"MoPterRes","type":"exact"}],"termid":"MOD:00744"}


id: PBO:0065715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PVR related immunoglobulin domain containing 2, pseudogene","termid":"PBO:0065715"}


id: GO:1905184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein serine/threonine phosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:16950131","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphoprotein phosphatase activity","termid":"GO:0032516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein serine/threonine phosphatase activity","synonyms":[{"name":"activation of protein serine/threonine phosphatase activity","type":"narrow"},{"name":"activation of serine/threonine specific protein phosphatase activity","type":"narrow"},{"name":"positive regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up-regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up-regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"upregulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"upregulation of serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:1905184"}


id: GO:0070814
data:
  {"annotated_genes":["SJAG_03475","SJAG_00084","SJAG_01693","SJAG_04060","SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84021,85009,86247,103703,113633],"is_not":false,"summary":null,"term":"GO:0070814"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen sulfide, H2S.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"hydrogen sulfide metabolic process","termid":"GO:0070813"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_01693":null,"SJAG_03475":null,"SJAG_04060":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"hydrogen sulfide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen sulfide anabolism","type":"exact"},{"name":"hydrogen sulfide biosynthesis","type":"exact"},{"name":"hydrogen sulfide formation","type":"exact"},{"name":"hydrogen sulfide synthesis","type":"exact"},{"name":"hydrogen sulphide biosynthesis","type":"exact"},{"name":"hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:0070814","terms_by_termid":{"GO:0070814":null}}


id: PBO:0108924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRNT1 pseudogene 2","termid":"PBO:0108924"}


id: PBO:0047305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl-tRNA synthetase subunit beta","termid":"PBO:0047305"}


id: GO:0005496
data:
  {"annotated_genes":["SJAG_00355","SJAG_03718","SJAG_02375","SJAG_02982","SJAG_01722","SJAG_02323","SJAG_01329","SJAG_00054","SJAG_01590","SJAG_01407","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90835],"is_not":false,"summary":null,"term":"GO:0005496"},{"annotations":[105566,90447,98795,112407,107521,104403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"},{"annotations":[86645,97852,102510,106054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032934"}]},"cv_name":"molecular_function","definition":"Binding to a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02982":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"steroid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005496","terms_by_termid":{"GO:0005496":null,"GO:0008142":null,"GO:0032934":null}}


id: GO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nuclear chromosome, a chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear chromosome part (obsolete GO:0044454)","termid":"GO:0044454"}


id: PBO:0003916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2B subunit","termid":"PBO:0003916"}


id: PBO:0058654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6782","termid":"PBO:0058654"}


id: PBO:0069533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 803, pseudogene","termid":"PBO:0069533"}


id: PBO:0051381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6D-41 (non-functional)","termid":"PBO:0051381"}


id: PBO:0003937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp16 (predicted)","termid":"PBO:0003937"}


id: GO:0034645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule biosynthetic process (obsolete GO:0034645)","synonyms":[{"name":"cellular biopolymer biosynthetic process","type":"exact"},{"name":"cellular macromolecule anabolism","type":"exact"},{"name":"cellular macromolecule biosynthesis","type":"exact"},{"name":"cellular macromolecule formation","type":"exact"},{"name":"cellular macromolecule synthesis","type":"exact"}],"termid":"GO:0034645"}


id: PBO:0046281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 3","termid":"PBO:0046281"}


id: PBO:0053045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4B","termid":"PBO:0053045"}


id: PBO:0082353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase; a hexameric enzyme, catalyzes the first step in histidine biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts; transcription is regulated by general amino acid control","termid":"PBO:0082353"}


id: GO:0033238
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amine metabolism","type":"exact"},{"name":"regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033238","terms_by_termid":{"GO:0010967":null}}


id: PBO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11","termid":"PBO:0060714"}


id: FYPO:0004400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5823.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on KT5823","synonyms":[{"name":"normal cell population growth in presence of KT5823","type":"exact"},{"name":"normal cell population growth on KT5823","type":"exact"},{"name":"normal cellular response to KT5823","type":"related"},{"name":"normal vegetative cell population growth on KT5823","type":"exact"}],"termid":"FYPO:0004400"}


id: PBO:0070405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A1","termid":"PBO:0070405"}


id: PBO:0005860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (predicted)","termid":"PBO:0005860"}


id: PBO:0049719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4 pseudogene 1","termid":"PBO:0049719"}


id: GO:1903398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of m7G(5')pppN diphosphatase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:22323607"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of m7G(5')pppN diphosphatase activity (obsolete GO:1903398)","synonyms":[{"name":"regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"regulation of decapase activity","type":"related"},{"name":"regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:1903398"}


id: MOD:01874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carboxy-L-valine.","definition_xrefs":["PubMed:4593770","PubMed:8312270","PubMed:18688235","PubMed:4647257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-valine","synonyms":[{"name":"(S)-2-carboxyamino-propanoic acid","type":"exact"},{"name":"2-carbamic-propanoic acid","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:01874"}


id: PATO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having a sudden onset, sharp rise, and short course.","definition_xrefs":["dictionary:reference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute","termid":"PATO:0000389"}


id: PBO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9 (predicted)","termid":"PBO:0005075"}


id: PBO:0056743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 1, tRNA methylguanosine","termid":"PBO:0056743"}


id: GO:0070181
data:
  {"annotated_genes":["SJAG_01387","SJAG_01132","SJAG_00253","SJAG_04281","SJAG_01468"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92832,95837,95838,111881,112196],"is_not":false,"summary":null,"term":"GO:0070181"}]},"cv_name":"molecular_function","definition":"Binding to small ribosomal subunit RNA (SSU rRNA), a constituent of the small ribosomal subunit. In S. cerevisiae, this is the 18S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00253":null,"SJAG_01132":null,"SJAG_01387":null,"SJAG_01468":null,"SJAG_04281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"small ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"18S rRNA binding","type":"exact"},{"name":"SSU rRNA binding","type":"exact"}],"termid":"GO:0070181","terms_by_termid":{"GO:0070181":null}}


id: PBO:0040144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1A histone chaperone","termid":"PBO:0040144"}


id: GO:0150057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 2. Amylin receptor complex 2 (AMY2) also serves as a receptor for adrenomedullin (AM/ADM).","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"amylin receptor complex 2","synonyms":[{"name":"AMY2 complex","type":"exact"}],"termid":"GO:0150057"}


id: GO:0098758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-8","synonyms":[{"name":"response to IL-8","type":"exact"}],"termid":"GO:0098758"}


id: GO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein as part of a process of ubiquitin-dependent protein catabolism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein deubiquitination involved in ubiquitin-dependent protein catabolic process","termid":"GO:0071947"}


id: GO:0036022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a limb joint are generated and organized. A limb joint is a flexible region that separates the rigid sections of a limb to allow movement in a controlled manner.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb joint morphogenesis","synonyms":[{"name":"knee morphogenesis","type":"narrow"},{"name":"leg joint morphogenesis","type":"narrow"}],"termid":"GO:0036022"}


id: GO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylaminomethyl-2-thiouridine + selenophosphate = 5-methylaminomethyl-2-selenouridine + phosphate (at the wobble position in tRNA).","definition_xrefs":["RHEA:42716","PMID:14594807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tRNA 2-selenouridine synthase activity","secondary_identifiers":["MetaCyc:RXN0-2281","EC:2.9.1.3"],"termid":"GO:0043828"}


id: GO:0032516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"positive regulation of protein dephosphorylation","termid":"GO:0035307"},{"relation_name":"is_a","term_name":"regulation of phosphoprotein phosphatase activity","termid":"GO:0043666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphoprotein phosphatase activity","secondary_identifiers":["GO:0032514","GO:0034049"],"synonyms":[{"name":"activation of calcineurin activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphatase 3 activity","type":"related"},{"name":"activation of protein phosphatase type 2A activity","type":"narrow"},{"name":"activation of protein phosphatase type 2B activity","type":"narrow"},{"name":"calcineurin activation","type":"narrow"},{"name":"positive regulation of calcineurin activity","type":"narrow"},{"name":"positive regulation of protein phosphatase 2 activity","type":"related"},{"name":"positive regulation of protein phosphatase 3 activity","type":"related"},{"name":"positive regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"positive regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"stimulation of phosphoprotein phosphatase activity","type":"narrow"},{"name":"stimulation of protein phosphatase 2 activity","type":"related"},{"name":"stimulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"stimulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up regulation of calcineurin activity","type":"narrow"},{"name":"up regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphatase 2 activity","type":"related"},{"name":"up regulation of protein phosphatase 3 activity","type":"related"},{"name":"up regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"up-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphatase 2 activity","type":"related"},{"name":"up-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"up-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"upregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphatase 2 activity","type":"related"},{"name":"upregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"upregulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0032516"}


id: FYECO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ val","synonyms":[{"name":"valine added","type":"exact"}],"termid":"FYECO:0000406"}


id: GO:0050345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-2,3-epoxysuccinate + H2O = (2R,3S)-tartrate.","definition_xrefs":["EC:3.3.2.4","RHEA:20740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"trans-epoxysuccinate hydrolase activity","secondary_identifiers":["MetaCyc:TRANS-EPOXYSUCCINATE-HYDROLASE-RXN","KEGG_REACTION:R02547"],"synonyms":[{"name":"tartrate epoxydase activity","type":"related"},{"name":"trans-2,3-epoxysuccinate hydrolase activity","type":"related"},{"name":"trans-epoxysuccinate hydratase activity","type":"related"}],"termid":"GO:0050345"}


id: PBO:0057809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-2","termid":"PBO:0057809"}


id: PR:Q9UTM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fap2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.04c","synonyms":[{"name":"Spom972h-fap2","type":"exact"}],"termid":"PR:Q9UTM9"}


id: PBO:0053096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3D","termid":"PBO:0053096"}


id: GO:1903839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:19575011","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA binding","termid":"GO:1902416"},{"relation_name":"is_a","term_name":"regulation of mRNA 3'-UTR binding","termid":"GO:1903837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA 3'-UTR binding","synonyms":[{"name":"activation of mRNA 3' UTR binding","type":"narrow"},{"name":"activation of mRNA 3'-UTR binding","type":"narrow"},{"name":"positive regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"upregulation of mRNA 3' UTR binding","type":"exact"},{"name":"upregulation of mRNA 3'-UTR binding","type":"exact"}],"termid":"GO:1903839"}


id: PBO:0070242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 182 pseudogene","termid":"PBO:0070242"}


id: GO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["PMID:14744432","GOC:jl","Wikipedia:Caspase","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity involved in apoptotic process","synonyms":[{"name":"caspase inhibitor activity","type":"broad"}],"termid":"GO:0043027"}


id: GO:0071603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an endothelial cell to another endothelial cell via adhesion molecules.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"endothelial cell-cell adhesion","termid":"GO:0071603"}


id: GO:0045659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of neutrophil differentiation","termid":"GO:0045658"},{"relation_name":"negatively_regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil differentiation","synonyms":[{"name":"down regulation of neutrophil differentiation","type":"exact"},{"name":"down-regulation of neutrophil differentiation","type":"exact"},{"name":"downregulation of neutrophil differentiation","type":"exact"},{"name":"inhibition of neutrophil differentiation","type":"narrow"}],"termid":"GO:0045659"}


id: PR:O94591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.01c gene.","definition_xrefs":["UniProtKB:O94591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.01c","synonyms":[{"name":"Spom972h-SPCC622.01c","type":"exact"}],"termid":"PR:O94591"}


id: PATO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurring or appearing again or repeatedly.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent","termid":"PATO:0000427"}


id: GO:0046793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus activates the frequency, rate or extent of phosphorylation of host RNA polymerase II.","definition_xrefs":["PMID:7637000"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of phosphorylation of host RNA polymerase II (obsolete GO:0046793)","synonyms":[{"name":"induction by virus of modification of host RNA polymerase II","type":"broad"},{"name":"virus-induced modification of host RNA polymerase II","type":"exact"}],"termid":"GO:0046793"}


id: GO:1902773
data:
  {"annotated_genes":["SJAG_04910","SJAG_04943","SJAG_02231","SJAG_01386"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89037,95841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990334"},{"annotations":[92297,103331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990877"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of GTPase activator activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:16449187","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01386":null,"SJAG_02231":null,"SJAG_04910":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GTPase activator complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902773","terms_by_termid":{"GO:1990334":null,"GO:1990877":null}}


id: PBO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial anion transporter (predicted)","termid":"PBO:0000727"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:aruk","GOC:BHF","GOC:bc","GOC:mah","PMID:26412237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: PBO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase catalytic subunit","termid":"PBO:0003412"}


id: FYPO:0006669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell mates with two partners, leading to the fusion of three cells. The resulting zygote can then undergo sporulation to form an ascus containing more than four spores.","definition_xrefs":["PomBase:mah","PMID:30089908"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mating between three cells","synonyms":[{"name":"abnormal conjugation between three cells","type":"exact"},{"name":"abnormal mating among three cells","type":"exact"}],"termid":"FYPO:0006669"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0042932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell growth regulator with EF-hand domain 1","termid":"PBO:0042932"}


id: PBO:0088488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1","termid":"PBO:0088488"}


id: PBO:0087637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the eukaryotic translation initiation factor 3 (eIF3); component of unknown function; deletion causes defects in mitochondrial organization but not in growth or translation initiation; can rescue cytokinesis and mitochondrial organization defects of the Dictyostelium cluA- mutant; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0087637"}


id: PR:Q9HE08
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylthioribulose-1-phosphate dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00873","PANTHER:PTHR10640:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribulose-1-phosphate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.05c","secondary_identifiers":["UniProtKB:Q9HE08"],"synonyms":[{"name":"MTRu-1-P dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APIP","type":"exact"}],"termid":"PR:Q9HE08"}


id: GO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more methyl groups from a molecule, involving the oxidation (i.e. electron loss) of one or more atoms in the substrate.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylation","termid":"GO:0070988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative demethylation","termid":"GO:0070989"}


id: PBO:0086504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein; in the Sigma 1278B strain background YLL053C is contiguous with AQY2 which encodes an aquaporin","termid":"PBO:0086504"}


id: GO:0070687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the cortical actin cytoskeleton that forms part of a macropinocytic cup.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"},{"relation_name":"part_of","term_name":"macropinocytic cup","termid":"GO:0070685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0015629","GO:0005737"],"is_obsolete":false,"name":"macropinocytic cup cytoskeleton","synonyms":[{"name":"crown cytoskeleton","type":"exact"}],"termid":"GO:0070687"}


id: PBO:0089397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma1","termid":"PBO:0089397"}


id: GO:0047024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5alpha-androstane-3beta,17beta-diol + NADP+ = 17beta-hydroxy-5alpha-androstan-3-one + H+ + NADPH.","definition_xrefs":["EC:1.1.1.210","RHEA:16297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5alpha-androstane-3beta,17beta-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.210-RXN","KEGG_REACTION:R04344"],"synonyms":[{"name":"3-beta(or 20-alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3-beta-HSD activity","type":"related"},{"name":"3beta(or 20alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3beta(or 20alpha)-hydroxysteroid:NADP+ oxidoreductase activity","type":"broad"},{"name":"3beta,20alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"dehydrogenase, 3beta,20alpha-hydroxy steroid","type":"broad"},{"name":"progesterone reductase activity","type":"related"}],"termid":"GO:0047024"}


id: SO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U12 small nuclear (snRNA), together with U4atac/U6atac, U5, and U11 snRNAs and associated proteins, forms a spliceosome that cleaves a divergent class of low-abundance pre-mRNA introns.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U12_snRNA"],"synonyms":[{"name":"U12 small nuclear RNA","type":"exact"},{"name":"U12 snRNA","type":"exact"},{"name":"small nuclear RNA U12","type":"exact"},{"name":"snRNA U12","type":"exact"}],"termid":"SO:0000399"}


id: GO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an icosanoid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"icosanoid receptor activity","synonyms":[{"name":"eicosanoid receptor activity","type":"exact"}],"termid":"GO:0004953"}


id: PBO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 7","termid":"PBO:0046553"}


id: GO:0015184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-cystine from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-cystine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5340130"],"synonyms":[{"name":"L-cystine transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015184"}


id: GO:0002728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of natural killer cell cytokine production","termid":"GO:0002727"},{"relation_name":"negatively_regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of natural killer cell cytokine production","synonyms":[{"name":"down regulation of natural killer cell cytokine production","type":"exact"},{"name":"down-regulation of natural killer cell cytokine production","type":"exact"},{"name":"downregulation of natural killer cell cytokine production","type":"exact"},{"name":"inhibition of natural killer cell cytokine production","type":"narrow"},{"name":"negative regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002728"}


id: GO:0018554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxynaphthalene + O2 = 2-hydroxychromene-2-carboxylate. C6 of the substrate molecular may have an NH2 group attached.","definition_xrefs":["UM-BBD_enzymeID:e0255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1,2-dihydroxynaphthalene dioxygenase activity","secondary_identifiers":["RHEA:27310","EC:1.13.11.56"],"termid":"GO:0018554"}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: GO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-dehydroalanine from either peptidyl-tyrosine by phenyl transfer, or from peptidyl-serine, which is coupled with the formation of 5-imidazolinone by the two neighboring residues, produces an 4-methylidene-imidazole-5-one active site of some amino acid ammonia-lyases; the 4-methylidene-imidazole-5-one, is formed autocatalytically by cyclization and dehydration of the sequence ASG.","definition_xrefs":["RESID:AA0181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-dehydroalanine biosynthetic process from peptidyl-tyrosine or peptidyl-serine","synonyms":[{"name":"peptidyl-dehydroalanine anabolism from peptidyl-tyrosine or peptidyl-serine","type":"exact"},{"name":"peptidyl-dehydroalanine formation from peptidyl-tyrosine or peptidyl-serine","type":"exact"},{"name":"peptidyl-dehydroalanine synthesis from peptidyl-tyrosine or peptidyl-serine","type":"exact"}],"termid":"GO:0018250"}


id: PBO:0077027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated family member 2","termid":"PBO:0077027"}


id: PBO:0003397
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Activated Ras1","termid":"PBO:0003397"}


id: PBO:0057140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR219A2 host gene","termid":"PBO:0057140"}


id: PBO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok13","termid":"PBO:0004584"}


id: GO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA.","definition_xrefs":["GOC:vw","PMID:26687354","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"negative regulation of sister chromatid cohesion","termid":"GO:0045875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cohesin unloading","synonyms":[{"name":"DNA exit from the cohesin ring","type":"exact"}],"termid":"GO:0061774"}


id: GO:1900699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"negatively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"down regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down regulation of o-orsellinic acid formation","type":"exact"},{"name":"down regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down-regulation of o-orsellinic acid formation","type":"exact"},{"name":"down-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"downregulation of o-orsellinic acid formation","type":"exact"},{"name":"downregulation of o-orsellinic acid synthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid anabolism","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"inhibition of o-orsellinic acid formation","type":"exact"},{"name":"inhibition of o-orsellinic acid synthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"negative regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid formation","type":"exact"},{"name":"negative regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900699"}


id: PBO:0039348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1-microglobulin/bikunin precursor","termid":"PBO:0039348"}


id: PBO:0056333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 14","termid":"PBO:0056333"}


id: PBO:0056001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056001"}


id: PBO:0045256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 2","termid":"PBO:0045256"}


id: GO:1902369
data:
  {"annotated_genes":["SJAG_03283","SJAG_03883","SJAG_04586","SJAG_02573","SJAG_03696","SJAG_04946","SJAG_04825","SJAG_03448","SJAG_01331","SJAG_00797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102485],"is_not":false,"summary":null,"term":"GO:1902369"},{"annotations":[77609,86422,96268,114448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[85712,92445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[85315,85713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[86014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[86861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:16640457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"negatively_regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01331":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA breakdown","type":"exact"},{"name":"down regulation of RNA catabolic process","type":"exact"},{"name":"down regulation of RNA catabolism","type":"exact"},{"name":"down regulation of RNA degradation","type":"exact"},{"name":"down-regulation of RNA breakdown","type":"exact"},{"name":"down-regulation of RNA catabolic process","type":"exact"},{"name":"down-regulation of RNA catabolism","type":"exact"},{"name":"down-regulation of RNA degradation","type":"exact"},{"name":"downregulation of RNA breakdown","type":"exact"},{"name":"downregulation of RNA catabolic process","type":"exact"},{"name":"downregulation of RNA catabolism","type":"exact"},{"name":"downregulation of RNA degradation","type":"exact"},{"name":"inhibition of RNA breakdown","type":"narrow"},{"name":"inhibition of RNA catabolic process","type":"narrow"},{"name":"inhibition of RNA catabolism","type":"narrow"},{"name":"inhibition of RNA degradation","type":"narrow"},{"name":"negative regulation of RNA breakdown","type":"exact"},{"name":"negative regulation of RNA catabolism","type":"exact"},{"name":"negative regulation of RNA degradation","type":"exact"}],"termid":"GO:1902369","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null}}


id: PBO:0059093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 (pseudogene)","termid":"PBO:0059093"}


id: PBO:0080828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1-associated myogenesis RNA 1","termid":"PBO:0080828"}


id: GO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in).","definition_xrefs":["GOC:curators","PMID:16371597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium:sodium antiporter activity","secondary_identifiers":["RHEA:29255","Reactome:R-HSA-8949703","Reactome:R-HSA-8949688","Reactome:R-HSA-425661"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"sodium/calcium exchanger","type":"exact"},{"name":"sodium:calcium exchange","type":"related"}],"termid":"GO:0005432"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: GO:0008974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + ATP = D-ribulose 1,5-bisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.19","RHEA:19365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"phosphoribulokinase activity","secondary_identifiers":["MetaCyc:PHOSPHORIBULOKINASE-RXN","KEGG_REACTION:R01523"],"synonyms":[{"name":"5-phosphoribulose kinase activity","type":"related"},{"name":"ATP:D-ribulose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PKK","type":"related"},{"name":"PRK","type":"related"},{"name":"PRuK","type":"related"},{"name":"phosphopentokinase activity","type":"related"},{"name":"phosphoribulokinase (phosphorylating)","type":"related"},{"name":"ribulose phosphate kinase activity","type":"related"},{"name":"ribulose-5-phosphate kinase activity","type":"related"}],"termid":"GO:0008974"}


id: PBO:0016069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zf-C2H2 type","termid":"PBO:0016069"}


id: PR:O94596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.06c","synonyms":[{"name":"Spom972h-SPCC622.06c","type":"exact"}],"termid":"PR:O94596"}


id: PBO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086072"}


id: PBO:0063671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3","termid":"PBO:0063671"}


id: PBO:0055196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2621","termid":"PBO:0055196"}


id: PBO:0011098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13","termid":"PBO:0011098"}


id: GO:0032613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-10 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-10 production","secondary_identifiers":["GO:0042091","GO:0072608"],"synonyms":[{"name":"IL-10 production","type":"exact"},{"name":"interleukin-10 biosynthetic process","type":"narrow"},{"name":"interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032613"}


id: PBO:0065422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 8","termid":"PBO:0065422"}


id: SO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The restriction enzyme cleavage junction on the 5' strand of the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single_strand_restriction_enzyme_cleavage_site","termid":"SO:0001694"},{"relation_name":"part_of","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_restriction_enzyme_junction","synonyms":[{"name":"5' restriction enzyme junction","type":"exact"}],"termid":"SO:0001689"}


id: PATO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a fringe or border of hairlike or fingerlike projections.","definition_xrefs":["PATO:WS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbriated","termid":"PATO:0002311"}


id: PBO:0028158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_5S_RNA_maturation","termid":"PBO:0028158"}


id: GO:0000256
data:
  {"annotated_genes":["SJAG_05287","SJAG_00035"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87974,88663],"is_not":false,"summary":null,"term":"GO:0000256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"allantoin catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"allantoin breakdown","type":"exact"},{"name":"allantoin catabolism","type":"exact"},{"name":"allantoin degradation","type":"exact"}],"termid":"GO:0000256","terms_by_termid":{"GO:0000256":null}}


id: GO:0034077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["ISBN:0911910123","MetaCyc:P125-PWY","MetaCyc:BUTANEDIOL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butanediol metabolic process","synonyms":[{"name":"butanediol metabolism","type":"exact"},{"name":"butylene glycol metabolic process","type":"exact"},{"name":"butylene glycol metabolism","type":"exact"}],"termid":"GO:0034077"}


id: PBO:0089556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin-like","termid":"PBO:0089556"}


id: PBO:0061747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NXT1 antisense RNA 1","termid":"PBO:0061747"}


id: PBO:0027013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_molecular_function","termid":"PBO:0027013"}


id: PBO:0065117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C theta","termid":"PBO:0065117"}


id: FYPO:0004790
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115633,115635,115634,115637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is abnormal (i.e. greater or less than the distance in wild type cells).","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null},"genotype_count":4,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal telomere-nuclear envelope distance during vegetative growth","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_01834","SJAG_03449"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta","pom152delta"],"synonyms":[{"name":"abnormal distance between telomeres and nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormal telomere-nuclear envelope distance during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004790","terms_by_termid":{"FYPO:0004890":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1905552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","PMID:22768340","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to endoplasmic reticulum","termid":"GO:1905550"},{"relation_name":"positively_regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"activation of protein localisation in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization in ER","type":"narrow"},{"name":"activation of protein localization in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization to endoplasmic reticulum","type":"narrow"},{"name":"positive regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"positive regulation of protein localization in ER","type":"exact"},{"name":"positive regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization in ER","type":"exact"},{"name":"up regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization in ER","type":"exact"},{"name":"up-regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization in ER","type":"exact"},{"name":"upregulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization to endoplasmic reticulum","type":"exact"}],"termid":"GO:1905552"}


id: GO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol, across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transport","synonyms":[{"name":"glucosylglycerol transport","type":"broad"}],"termid":"GO:0051475"}


id: GO:0033594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyisoflavone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroxyisoflavone","termid":"GO:0033594"}


id: GO:0004024
data:
  {"annotated_genes":["SJAG_01457","SJAG_00240","SJAG_03822"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94919,94920,99667],"is_not":false,"summary":null,"term":"GO:0004024"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+, requiring the presence of zinc.","definition_xrefs":["EC:1.1.1.1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01457":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alcohol dehydrogenase (NAD+) activity, zinc-dependent","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71707"],"synonyms":[{"name":"alcohol dehydrogenase activity, zinc-dependent","type":"broad"}],"termid":"GO:0004024","terms_by_termid":{"GO:0004024":null}}


id: PR:P31318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg11 gene.","definition_xrefs":["UniProtKB:P31318","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arg11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.09c","synonyms":[{"name":"Spom972h-arg11","type":"exact"}],"termid":"PR:P31318"}


id: PBO:0053489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 466","termid":"PBO:0053489"}


id: GO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticosterone into the circulatory system. Corticosterone is a 21-carbon steroid hormone of the corticosteroid type produced in the cortex of the adrenal glands.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"corticosterone secretion","termid":"GO:0035934"}


id: PBO:0071240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 81","termid":"PBO:0071240"}


id: GO:2001105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltoheptaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maltoheptaose transport","termid":"GO:2001105"}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: GO:0099051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The membrane scission process that is the final step in the formation of an endocytic vesicle: separation from the plasma membrane.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle scission","termid":"GO:0099050"},{"relation_name":"part_of","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle scission involved in endocytosis","termid":"GO:0099051"}


id: GO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:0003275"}


id: PBO:0070965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 3","termid":"PBO:0070965"}


id: PBO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.3.1","termid":"PBO:0004847"}


id: FYPO:0002074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in the population are viable at a high temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable cell population at high temperature (obsolete FYPO:0002074)","termid":"FYPO:0002074"}


id: MOD:00603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 283 is redundant with Unimod 280. Remap to MOD:00600","definition_xrefs":["Unimod:283"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00603 N-ethylation (obsolete MOD:00603)","termid":"MOD:00603"}


id: GO:0006209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"cytosine catabolic process","synonyms":[{"name":"cytosine breakdown","type":"exact"},{"name":"cytosine catabolism","type":"exact"},{"name":"cytosine degradation","type":"exact"}],"termid":"GO:0006209"}


id: GO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-ornithine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-ornithine transmembrane export from vacuole","termid":"GO:0089706"}


id: PBO:0028576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_farnesyltransferase_activity","termid":"PBO:0028576"}


id: PBO:0086715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutation results in impaired mitochondrial respiration","termid":"PBO:0086715"}


id: PBO:0041811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARHSP1 divergent transcript","termid":"PBO:0041811"}


id: GO:0090465
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92812],"is_not":false,"summary":null,"term":"GO:0090465"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of arginine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular arginine homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine homeostasis","type":"exact"},{"name":"cellular arginine homeostasis","type":"exact"}],"termid":"GO:0090465","terms_by_termid":{"GO:0090465":null}}


id: GO:0000271
data:
  {"annotated_genes":["SJAG_04184","SJAG_04878","SJAG_03705","SJAG_02916","SJAG_01288","SJAG_05285","SJAG_04509","SJAG_02278","SJAG_01028","SJAG_00183","SJAG_01963","SJAG_01453","SJAG_04462","SJAG_02446","SJAG_01835","SJAG_03587","SJAG_01787","SJAG_00876","SJAG_00218","SJAG_04771","SJAG_00610","SJAG_04666","SJAG_04073","SJAG_02590","SJAG_01426","SJAG_00424","SJAG_03123","SJAG_03057","SJAG_01209","SJAG_04668","SJAG_02222","SJAG_00771","SJAG_04483","SJAG_00963","SJAG_01376","SJAG_04236","SJAG_01290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90414,98638,86818,112729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[89531,101942,91450,96797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[110565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[90661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[105272,100358,110566,85378,113939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[84321,102283,87794,103970,109360,105503,111997,87784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104809,98824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[102285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[105097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[77900,87149],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[88622],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83768,88625],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[84148],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[88611,99031,101522,88627,114052,86991],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[91135,99033,88631,85669],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04878":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycan biosynthesis","type":"exact"},{"name":"glycan biosynthetic process","type":"exact"},{"name":"polysaccharide anabolism","type":"exact"},{"name":"polysaccharide biosynthesis","type":"exact"},{"name":"polysaccharide formation","type":"exact"},{"name":"polysaccharide synthesis","type":"exact"}],"termid":"GO:0000271","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0051274":null,"GO:0051278":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0097323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a B cell to another cell via adhesion molecules.","definition_xrefs":["GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"B cell adhesion","termid":"GO:0097323"}


id: PBO:0078147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 26-1","termid":"PBO:0078147"}


id: PBO:0043360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 2","termid":"PBO:0043360"}


id: PBO:0071528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 31","termid":"PBO:0071528"}


id: PBO:0063472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 2","termid":"PBO:0063472"}


id: PBO:0091566
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Related Protein","termid":"PBO:0091566"}


id: PBO:0039372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR1 like pseudogene 1","termid":"PBO:0039372"}


id: PBO:0048286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase like 6","termid":"PBO:0048286"}


id: GO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-beta-L-arabinofuranose = UDP-beta-L-arabinopyranose.","definition_xrefs":["EC:5.4.99.30","RHEA:28350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"UDP-arabinopyranose mutase activity","secondary_identifiers":["MetaCyc:RXN-11552"],"synonyms":[{"name":"UDP-L-Ara mutase activity","type":"related"},{"name":"UDP-L-arabinopyranose furanomutase activity","type":"related"},{"name":"UDP-L-arabinose mutase activity","type":"related"},{"name":"UDP-arabinopyranose pyranomutase activity","type":"exact"},{"name":"uridine-diphosphate-L-arabinose mutase activity","type":"related"}],"termid":"GO:0052691"}


id: FYPO:0004736
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, composition or morphology of the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal actomyosin contractile ring","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","pom1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"abnormal contractile ring","type":"exact"},{"name":"abnormal cytokinetic contractile ring","type":"exact"},{"name":"abnormal mitotic contractile ring","type":"exact"}],"termid":"FYPO:0004736","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


