# terms

id: GO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"},{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0044248","GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}


id: PATO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is less than 90 degrees.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute angle to","termid":"PATO:0001051"}


id: GO:1901465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole metabolic process","termid":"GO:1901403"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"activation of tetrapyrrole anabolism","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"activation of tetrapyrrole formation","type":"exact"},{"name":"activation of tetrapyrrole synthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole formation","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up regulation of tetrapyrrole formation","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up-regulation of tetrapyrrole formation","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"upregulation of tetrapyrrole formation","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901465"}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_00949","SJAG_02754","SJAG_01813","SJAG_02417","SJAG_00841","SJAG_04414","SJAG_01364","SJAG_02374","SJAG_03012","SJAG_03658","SJAG_03697","SJAG_04330","SJAG_03496","SJAG_05679","SJAG_02535","SJAG_04066","SJAG_04346","SJAG_02952","SJAG_01811","SJAG_04940","SJAG_02508","SJAG_04304","SJAG_00166","SJAG_00722","SJAG_03458","SJAG_01621","SJAG_04395","SJAG_01581","SJAG_02868","SJAG_00752","SJAG_02427","SJAG_00537","SJAG_04669","SJAG_05223","SJAG_01494","SJAG_03080","SJAG_00749","SJAG_04108","SJAG_00689","SJAG_02275","SJAG_02745","SJAG_02840","SJAG_01606","SJAG_01122","SJAG_03773","SJAG_04004","SJAG_00932","SJAG_04992","SJAG_00479","SJAG_01161","SJAG_02830","SJAG_01568","SJAG_04599","SJAG_05190","SJAG_03789","SJAG_04562","SJAG_03905","SJAG_01954","SJAG_00271","SJAG_03413","SJAG_02890","SJAG_04308","SJAG_00921","SJAG_02759","SJAG_04492","SJAG_04919","SJAG_04180","SJAG_00323","SJAG_03666","SJAG_01752","SJAG_01420","SJAG_01339","SJAG_00390","SJAG_02436","SJAG_02475","SJAG_04847","SJAG_03713","SJAG_00882","SJAG_04289","SJAG_01839","SJAG_05248","SJAG_02644","SJAG_03466","SJAG_01454","SJAG_04176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84188,86174,86588,87039,87266,87267,88213,94604,96654,96915,98057,99092,99586,100752,101906,101907,103158,104142,104184,104363,107259,108480,108995,112298,112735,113448,115049,115100,115101],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[89012,96584,107005,115032,98703,99696,96769,112832,103624,85853,88593,109093,111949,94174,108336,89404,96913,95365,111948,107632,112345,105206,102182],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[87893,91154,100301,114699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[88299,101393,100318,98704,106935,100240,91032,111530,94175,100467,95639,98088,111531,112756,112755,93266,106934,98087,100987,83904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[89014,89100,112347,115034,109811,104066],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[111950,86067,85855,111026,113797,96914,102184,88594,94177,107007,111951,94144,113818],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[104576],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[99863,101734,111823,97389,98667,93677,89566,111890,93676,98666,113922,114328],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03413":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03666":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: GO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"}


id: GO:0102474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol dibenzoylmethane tautomer + UDP-alpha-D-glucose = 6C-beta-D-glucosyl-2-hydroxyeriodictyol + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"eriodictyol dibenzoylmethane tautomer 6C-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14079"],"termid":"GO:0102474"}


id: PBO:0039929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 34, pseudogene","termid":"PBO:0039929"}


id: PBO:0077545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 255B","termid":"PBO:0077545"}


id: PATO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000449 increased percentage (obsolete PATO:0000449)","termid":"PATO:0000449"}


id: GO:2000803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is passed on to downstream components located at the endosome. Endosomes can provide important intracellular signaling platforms and provide spatial and temporal control over signal transduction.","definition_xrefs":["PMID:15084302","PMID:17662591","GOC:bf","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete endosomal signal transduction (obsolete GO:2000803)","synonyms":[{"name":"endosome-based signaling","type":"exact"},{"name":"signaling cascade in endosome","type":"related"},{"name":"signaling from endosome","type":"exact"},{"name":"signaling pathway in endosome","type":"related"},{"name":"signalling cascade in endosome","type":"related"},{"name":"signalling pathway in endosome","type":"related"}],"termid":"GO:2000803"}


id: GO:0060202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted acetylcholine transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted acetylcholine transport vesicle","termid":"GO:0060200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle lumen","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle lumen","type":"exact"}],"termid":"GO:0060202"}


id: PBO:0064888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R2B intronic transcript 1","termid":"PBO:0064888"}


id: PBO:0066086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0066086"}


id: PBO:0029817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_abnormal_cell_shape","termid":"PBO:0029817"}


id: FYECO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bismuth ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Bi ions","synonyms":[{"name":"bismuth ions added","type":"exact"}],"termid":"FYECO:0000037"}


id: GO:0075082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont transmembrane receptor-mediated signal transduction (obsolete GO:0075082)","termid":"GO:0075082"}


id: PR:Q09744
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.03c gene.","definition_xrefs":["UniProtKB:Q09744","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C12C2.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.03c","synonyms":[{"name":"Spom972h-SPBC12C2.03c","type":"exact"}],"termid":"PR:Q09744"}


id: GO:0102870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7-hydroxyflavone = 7-O-beta-D-glucosyl-7-hydroxyflavone + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"7-hydroxyflavone-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8355"],"termid":"GO:0102870"}


id: PBO:0056939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR7-3 host gene","termid":"PBO:0056939"}


id: FYPO:0006169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to 4-nitroquinoline N-oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide","synonyms":[{"name":"normal protein phosphorylation during cellular response to 4-NQO","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4NQO","type":"exact"}],"termid":"FYPO:0006169"}


id: GO:0015123
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94892],"is_not":false,"summary":null,"term":"GO:0015123"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetate from one side of a membrane to the other. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"acetate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015123","terms_by_termid":{"GO:0015123":null}}


id: PBO:0053068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"layilin","termid":"PBO:0053068"}


id: PR:O13691
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02202","PANTHER:PTHR10371:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase 24 kDa subunit homolog C11E3.12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.12","secondary_identifiers":["UniProtKB:O13691"],"synonyms":[{"name":"Spom972h-NDUFV2","type":"exact"}],"termid":"PR:O13691"}


id: MOD:01871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxamidomethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of ammonia.","definition_xrefs":["DeltaMass:336","Unimod:26","PubMed:12643538"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized N-terminal S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01871"}


id: GO:0015865
data:
  {"annotated_genes":["SJAG_04325","SJAG_03452","SJAG_00612","SJAG_02050","SJAG_00760","SJAG_03334","SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[99039,107088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[107089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[111328,63025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[107090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[107091,99040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[87049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[89103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"purine nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015865","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0035348":null,"GO:0140021":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0069342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 602, pseudogene","termid":"PBO:0069342"}


id: PBO:0078534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 26B, pseudogene","termid":"PBO:0078534"}


id: GO:0004741
data:
  {"annotated_genes":["SJAG_03310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84112],"is_not":false,"summary":null,"term":"GO:0004741"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + H2O = L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + phosphate.","definition_xrefs":["EC:3.1.3.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824","GO:0140096","GO:0004721"],"is_obsolete":false,"name":"[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:12669","Reactome:R-HSA-204169","MetaCyc:3.1.3.43-RXN","GO:0019906"],"synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase activity","type":"exact"},{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic catalyst activity","type":"exact"},{"name":"pyruvate dehydrogenase (lipoamide) phosphatase activity","type":"exact"}],"termid":"GO:0004741","terms_by_termid":{"GO:0004741":null}}


id: GO:1990098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing at least one DNA helicase and one primase. Can also contain associated proteins. The helicase component continues to unwind the double-stranded DNA (dsDNA) and the primase component synthesizes a RNA primer during initiation or restart of replication.","definition_xrefs":["GOC:bhm","PMID:21856207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"core primosome complex","synonyms":[{"name":"core primosome","type":"exact"}],"termid":"GO:1990098"}


id: PBO:0079157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 16","termid":"PBO:0079157"}


id: GO:0046308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Z-phenylacetaldoxime metabolic process","termid":"GO:0018983"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime catabolic process","synonyms":[{"name":"Z-phenylacetaldoxime breakdown","type":"exact"},{"name":"Z-phenylacetaldoxime catabolism","type":"exact"},{"name":"Z-phenylacetaldoxime degradation","type":"exact"}],"termid":"GO:0046308"}


id: PBO:0040132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB16 antisense RNA 1","termid":"PBO:0040132"}


id: GO:0019792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete APG12 hydrolase activity (obsolete GO:0019792)","synonyms":[{"name":"APG12 hydrolase activity","type":"exact"}],"termid":"GO:0019792"}


id: GO:0097756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of blood vessel diameter (obsolete GO:0097756)","synonyms":[{"name":"negative regulation of vasodilation","type":"related"}],"termid":"GO:0097756"}


id: GO:0005557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lymphocyte antigen (obsolete GO:0005557)","synonyms":[{"name":"lymphocyte antigen","type":"exact"}],"termid":"GO:0005557"}


id: PBO:0048966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1 pseudogene 1","termid":"PBO:0048966"}


id: GO:0070515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to talin.","definition_xrefs":["PMID:8663236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-talin complex","synonyms":[{"name":"ITGA2b-ITGB3-TLN1 complex","type":"narrow"}],"termid":"GO:0070515"}


id: MOD:00310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N5-methyl-L-arginine.","definition_xrefs":["PubMed:9792625","RESID:AA0305","PubMed:11875433","PubMed:9873020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N5-methyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(N-methylcarbamimidamido)pentanoic acid","type":"exact"},{"name":"MOD_RES N5-methylarginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N5-carbamimidoyl-N5-methyl-L-ornithine","type":"exact"},{"name":"N5-methyl-L-arginine","type":"exact"},{"name":"N5-methylated L-arginine","type":"exact"},{"name":"N5Me1Arg","type":"exact"},{"name":"delta-N-methylarginine","type":"exact"}],"termid":"MOD:00310"}


id: GO:0160015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transient adhesive interactions between platelets and endothelial cells lining blood vessels. Carbohydrates on circulating platelets bind selectins or other molecules on the vessel wall causing the platelets to slow down and roll along the inner surface of the vessel wall. During this rolling motion, transitory bonds are formed and broken between surface molecules of platelets and endothelium.","definition_xrefs":["PMID:29018081","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"platelet rolling","termid":"GO:0160015"}


id: PBO:0091211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit ribosomal RNA","termid":"PBO:0091211"}


id: PR:Q9Y7R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.11 gene.","definition_xrefs":["UniProtKB:Q9Y7R9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C306.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.11","synonyms":[{"name":"Spom972h-SPCC306.11","type":"exact"}],"termid":"PR:Q9Y7R9"}


id: GO:0102070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 18-hydroxyoleate + a lipid hydroperoxide = 9,10-epoxy-18-hydroxystearate + a lipid alcohol.","definition_xrefs":["PMID:468835","GOC:pz","PMID:12226220","PMID:14535881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"18-hydroxyoleate peroxygenase activity","secondary_identifiers":["EC:1.11.2.3","MetaCyc:RXN-1064"],"termid":"GO:0102070"}


id: PBO:0110348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENATAC pseudogene 1","termid":"PBO:0110348"}


id: PBO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEMIN7 antisense RNA 1","termid":"PBO:0048532"}


id: PBO:0047396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 36","termid":"PBO:0047396"}


id: GO:1902394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["PMID:1234","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of deoxyribonuclease activity","termid":"GO:0032077"},{"relation_name":"is_a","term_name":"regulation of exodeoxyribonuclease activity","termid":"GO:1902392"},{"relation_name":"is_a","term_name":"positive regulation of exonuclease activity","termid":"GO:1905779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of exodeoxyribonuclease activity","synonyms":[{"name":"activation of exodeoxyribonuclease activity","type":"narrow"},{"name":"up regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"up-regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"upregulation of exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:1902394"}


id: PBO:0028836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028836"}


id: PBO:0029622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029622"}


id: FYPO:0006476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the onset of anaphase of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased duration of mitotic M phase","termid":"FYPO:0006490"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"premature mitotic metaphase/anaphase transition","synonyms":[{"name":"advanced mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"decreased duration of metaphase during mitosis","type":"related"},{"name":"decreased duration of mitotic metaphase","type":"related"},{"name":"premature cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"premature cell cycle progression through mitotic metaphase/anaphase transition","type":"exact"},{"name":"premature metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"premature mitotic metaphase/anaphase phase transition","type":"exact"},{"name":"premature mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"premature onset of mitotic anaphase","type":"exact"}],"termid":"FYPO:0006476"}


id: PBO:0068173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 480","termid":"PBO:0068173"}


id: PBO:0083971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosamine-6-phosphate acetyltransferase; evolutionarily conserved; required for multiple cell cycle events including passage through START, DNA synthesis, and mitosis; involved in UDP-N-acetylglucosamine synthesis, forms GlcNAc6P from AcCoA","termid":"PBO:0083971"}


id: PBO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc11","termid":"PBO:0001087"}


id: PR:O13872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02052","PANTHER:PTHR12937:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 28 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.07c","secondary_identifiers":["UniProtKB:O13872"],"synonyms":[{"name":"ESCRT-I complex subunit vps28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-VPS28","type":"exact"}],"termid":"PR:O13872"}


id: GO:0031931
data:
  {"annotated_genes":["SJAG_01703","SJAG_00756","SJAG_02723","SJAG_01320","SJAG_01509","SJAG_00167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62133,94751,102830,102866,109219,111105],"is_not":false,"summary":null,"term":"GO:0031931"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) and Raptor (regulatory-associated protein of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of S6K. In Saccharomyces, the complex contains Kog1p, Lst8p, Tco89p, and either Tor1p or Tor2p.","definition_xrefs":["GOC:jh","PMID:21548787","PMID:15780592","PMID:16469695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR complex","termid":"GO:0038201"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00167":null,"SJAG_00756":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TORC1 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:MTORC1"],"synonyms":[{"name":"TOR complex 1","type":"exact"},{"name":"TORC 1 complex","type":"exact"},{"name":"TORC1","type":"exact"},{"name":"dTOR/dRaptor complex","type":"narrow"},{"name":"dTORC1","type":"narrow"},{"name":"mTORC1","type":"narrow"},{"name":"nutrient sensitive complex","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex","type":"exact"}],"termid":"GO:0031931","terms_by_termid":{"GO:0031931":null}}


id: PBO:0012269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 4 Pre6","termid":"PBO:0012269"}


id: GO:0106146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sideretin.","definition_xrefs":["PMID:29581584","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sideretin biosynthesis","termid":"GO:0106146"}


id: PBO:0059870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 8","termid":"PBO:0059870"}


id: GO:0046227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,5-trichlorophenoxyacetic acid biosynthetic process (obsolete GO:0046227)","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid anabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid biosynthesis","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid biosynthetic process","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid formation","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid synthesis","type":"exact"}],"termid":"GO:0046227"}


id: GO:0031974
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id: GO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The plasma membrane fusion process that results in fusion of mononuclear osteoclasts to form a multinuclear osteoclast.","definition_xrefs":["PMID:12713016","CL:0000779","GOC:BHF","GOC:mah","CL:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"},{"relation_name":"part_of","term_name":"multinuclear osteoclast differentiation","termid":"GO:0072674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast fusion","termid":"GO:0072675"}


id: GO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-dihydroorotate + O2 = H2O2 + orotate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroorotate oxidase activity (obsolete GO:0004158)","synonyms":[{"name":"(S)-dihydroorotate:oxygen oxidoreductase activity","type":"related"},{"name":"4,5-L-dihydroorotate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0004158"}


id: GO:0140312
data:
  {"annotated_genes":["SJAG_00379","SJAG_00800","SJAG_03726","SJAG_00104","SJAG_02805","SJAG_02453","SJAG_01167","SJAG_03404","SJAG_00152","SJAG_01809","SJAG_04609","SJAG_04931","SJAG_04565","SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101897],"is_not":false,"summary":null,"term":"GO:0140312"},{"annotations":[104532,109205,115021,92334,90388,107789,107692,85144,95509,97314,92467,107851,108981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035615"}]},"cv_name":"molecular_function","definition":"Binding directly to the structural scaffolding elements of a vesicle coat (such as clathrin or COPII), and bridging the membrane, cargo receptor, and membrane deformation machinery.","definition_xrefs":["PMID:25795254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00152":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03404":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"cargo adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098748"],"synonyms":[{"name":"endocytic adaptor activity","type":"narrow"}],"termid":"GO:0140312","terms_by_termid":{"GO:0035615":null,"GO:0140312":null}}


id: PBO:0034377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-innervated_by","termid":"PBO:0034377"}


id: PBO:0087572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH complex; facilities dissociation of the Ssl2p helices from TFIIH; expression levels regulated by Arg5,6p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087572"}


id: PBO:0080579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5","termid":"PBO:0080579"}


id: SO:0000683
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Exonic splicing enhancers (ESEs) facilitate exon definition by assisting in the recruitment of splicing factors to the adjacent intron.","direct_ancestors":[{"relation_name":"is_a","term_name":"splice_enhancer","termid":"SO:0000344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splice_enhancer","synonyms":[{"name":"exonic splice enhancer","type":"exact"}],"termid":"SO:0000683"}


id: PBO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 3","termid":"PBO:0044308"}


id: PBO:0038960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase","termid":"PBO:0038960"}


id: PBO:0076916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 delta","termid":"PBO:0076916"}


id: PBO:0042278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 homolog, vacuolar protein trafficking and biogenesis associated","termid":"PBO:0042278"}


id: PBO:0108625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosome assembly protein Rsm2202, fusion protein","termid":"PBO:0108625"}


id: GO:1902395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 1-deoxy-D-xylulose-5-phosphate synthase activity.","definition_xrefs":["GOC:TermGenie","PMID:23612965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity","synonyms":[{"name":"regulation of 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating) activity","type":"exact"},{"name":"regulation of 1-deoxyxylulose-5-phosphate synthase activity","type":"exact"},{"name":"regulation of DOXP synthase activity","type":"exact"},{"name":"regulation of DXP-synthase activity","type":"exact"},{"name":"regulation of pyruvate:D-glyceraldehyde-3-phosphate acetaldehydetransferase (decarboxylating)","type":"exact"}],"termid":"GO:1902395"}


id: GO:0021776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GO_REF:0000021","PMID:15936325","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in spinal cord motor neuron cell fate specification","synonyms":[{"name":"hedgehog signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"hh signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"smoothened signalling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"}],"termid":"GO:0021776"}


id: GO:0042079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI/GSI anchor metabolic process (obsolete GO:0042079)","synonyms":[{"name":"GPI/GSI anchor metabolic process","type":"exact"}],"termid":"GO:0042079"}


id: FYECO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ubiquinone Q6 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ubiquinone Q6","synonyms":[{"name":"coenzyme Q6 added","type":"exact"}],"termid":"FYECO:0000131"}


id: GO:0060665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching involved in salivary gland morphogenesis as a result of signals being generated by the mesenchyme and received and interpreted by the salivary gland epithelium.","definition_xrefs":["PMID:17336109","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060665"}


id: PBO:0065874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 2","termid":"PBO:0065874"}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: PBO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comment","termid":"PBO:0000039"}


id: FYPO:0003835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"},{"relation_name":"is_a","term_name":"normal nucleus positioning","termid":"FYPO:0001389"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal horsetail movement","synonyms":[{"name":"normal dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0003835"}


id: PBO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates agn1","termid":"PBO:0001956"}


id: GO:0033121
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72057,75101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of purine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of purine nucleotide breakdown","type":"exact"},{"name":"regulation of purine nucleotide catabolism","type":"exact"},{"name":"regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033121","terms_by_termid":{"GO:0045820":null}}


id: PBO:0065015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 1 pseudogene 1","termid":"PBO:0065015"}


id: PBO:0060994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nescient helix-loop-helix 1","termid":"PBO:0060994"}


id: PR:O59673
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit H, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.10c","synonyms":[{"name":"Spom972h-atp14","type":"exact"}],"termid":"PR:O59673"}


id: GO:1903307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12526776","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"positively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of regulated secretory pathway","synonyms":[{"name":"activation of regulated secretory pathway","type":"narrow"},{"name":"up regulation of regulated secretory pathway","type":"exact"},{"name":"up-regulation of regulated secretory pathway","type":"exact"},{"name":"upregulation of regulated secretory pathway","type":"exact"}],"termid":"GO:1903307"}


id: GO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Vacuole formed by the fusion of a lysosome with an organelle (autosome) or with a primary phagosome.","definition_xrefs":["GOC:jl","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"secondary lysosome","secondary_identifiers":["NIF_Subcellular:sao1549842807"],"termid":"GO:0005767"}


id: PBO:0026991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactose:mannose_ratio_in_glycoprotein_glycan","termid":"PBO:0026991"}


id: GO:0071480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gamma radiation","termid":"GO:0010332"},{"relation_name":"is_a","term_name":"cellular response to ionizing radiation","termid":"GO:0071479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gamma radiation","synonyms":[{"name":"cellular response to gamma ray","type":"related"},{"name":"cellular response to gamma-ray photon","type":"related"}],"termid":"GO:0071480"}


id: PBO:0012258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 6","termid":"PBO:0012258"}


id: PATO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An area which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"area","termid":"PATO:0001323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased area","termid":"PATO:0002057"}


id: PBO:0111850
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family","termid":"PBO:0111850"}


id: PBO:0059179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose receptor C type 2","termid":"PBO:0059179"}


id: PBO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU pseudogene 2","termid":"PBO:0047324"}


id: PBO:0063899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class V","termid":"PBO:0063899"}


id: GO:0000812
data:
  {"annotated_genes":["SJAG_05192","SJAG_04097","SJAG_03579","SJAG_02571","SJAG_03036","SJAG_02466","SJAG_02385","SJAG_04596","SJAG_02798","SJAG_01465","SJAG_02500","SJAG_03694","SJAG_02990","SJAG_04355","SJAG_03145","SJAG_05282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84231,86914,88577,92849,94433,95149,97153,97874,104070,105262,108434,109344,109511,110892,113425,113606],"is_not":false,"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.","definition_xrefs":["GOC:rb","PMID:14645854","PMID:14690608","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"is_a","term_name":"INO80-type complex","termid":"GO:0097346"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02798":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"Swr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SWR-C","type":"exact"}],"termid":"GO:0000812","terms_by_termid":{"GO:0000812":null}}


id: PBO:0063450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 8B","termid":"PBO:0063450"}


id: PBO:0033768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_pole_body_duplication","termid":"PBO:0033768"}


id: PBO:0049196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor delta type subunit 2","termid":"PBO:0049196"}


id: GO:0072047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in nephron development","type":"exact"},{"name":"proximal/distal nephron patterning","type":"exact"}],"termid":"GO:0072047"}


id: GO:0035375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a zymogen, an enzymatically inactive precursor of an enzyme that is often convertible to an active enzyme by proteolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"zymogen binding","synonyms":[{"name":"proenzyme binding","type":"narrow"}],"termid":"GO:0035375"}


id: GO:0072688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SHREC complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"SHREC complex localization","synonyms":[{"name":"SHREC complex localisation","type":"exact"},{"name":"establishment and maintenance of SHREC complex localization","type":"exact"}],"termid":"GO:0072688"}


id: FYPO:0003221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"},{"relation_name":"is_a","term_name":"normal protein acetylation during vegetative growth","termid":"FYPO:0003362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone acetylation during vegetative growth","synonyms":[{"name":"normal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003221"}


id: GO:0018680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 deethylatrazine + O2 = 2 CH3COCH3 + 2 deisopropyldeethylatrazine.","definition_xrefs":["UM-BBD_reactionID:r0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"deethylatrazine monooxygenase activity","secondary_identifiers":["EC:1.14.15.-"],"termid":"GO:0018680"}


id: PBO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rapamycin","termid":"PBO:0031353"}


id: PBO:0077343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 82","termid":"PBO:0077343"}


id: GO:0102570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-tyrosine = L-phenylalanine + 3-(4-hydroxyphenyl)pyruvate.","definition_xrefs":["EC:2.6.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tyrosine:phenylpyruvate aminotransferase activity","secondary_identifiers":["MetaCyc:RXN-15200"],"termid":"GO:0102570"}


id: GO:0046711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP biosynthetic process","synonyms":[{"name":"GDP anabolism","type":"exact"},{"name":"GDP biosynthesis","type":"exact"},{"name":"GDP formation","type":"exact"},{"name":"GDP synthesis","type":"exact"}],"termid":"GO:0046711"}


id: PBO:0068892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 133, pseudogene","termid":"PBO:0068892"}


id: PBO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Tup12","termid":"PBO:0000317"}


id: PR:O94379
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl32 gene.","definition_xrefs":["UniProtKB:O94379","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L32, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.13c","synonyms":[{"name":"Spom972h-mrpl32","type":"exact"}],"termid":"PR:O94379"}


id: PR:Q9C0W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02859","PRO:DNx","PANTHER:PTHR22780:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.03c","secondary_identifiers":["UniProtKB:Q9C0W7"],"synonyms":[{"name":"Spom972h-AP2A2","type":"exact"},{"name":"alpha-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 2 alpha large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large alpha chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0W7"}


id: PBO:0062856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 1","termid":"PBO:0062856"}


id: PR:Q9P544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1635.01 gene.","definition_xrefs":["UniProtKB:Q9P544","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein porin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1635.01","synonyms":[{"name":"Spom972h-SPAC1635.01","type":"exact"}],"termid":"PR:Q9P544"}


id: PBO:0078929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-1","termid":"PBO:0078929"}


id: GO:0102080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + glycine = H+ + phenylacetylglycine + coenzyme A.","definition_xrefs":["EC:2.3.1.192","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"phenylacetyl-coenzyme A:glycine N-acyltransferase activity","secondary_identifiers":["RHEA:27850","MetaCyc:RXN-10821"],"termid":"GO:0102080"}


id: PBO:0044863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 1A","termid":"PBO:0044863"}


id: GO:0006232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009194"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"TDP biosynthetic process","synonyms":[{"name":"TDP anabolism","type":"exact"},{"name":"TDP biosynthesis","type":"exact"},{"name":"TDP formation","type":"exact"},{"name":"TDP synthesis","type":"exact"}],"termid":"GO:0006232"}


id: GO:0071518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxy-pentane-2,3-dione + ATP = 5-phospho-4-hydroxy-pentane-2,3-dione (P-DPD) + ADP.","definition_xrefs":["GOC:imk","PMID:20025244","PMID:17274596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"autoinducer-2 kinase activity","secondary_identifiers":["MetaCyc:RXN0-5461","RHEA:15377"],"synonyms":[{"name":"4,5-dihydroxy-pentane-2,3-dione kinase activity","type":"exact"}],"termid":"GO:0071518"}


id: GO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:tb","GOC:bf","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"},{"relation_name":"is_a","term_name":"establishment of apical/basal cell polarity","termid":"GO:0035089"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"},{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"}


id: PBO:0005238
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of staurosporine","termid":"PBO:0005238"}


id: PBO:0084628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylglyoxalase that converts methylglyoxal to D-lactate; involved in oxidative stress resistance, diauxic shift, and stationary phase survival; has similarity to E. coli Hsp31 and C. albicans Glx3p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer; exists as a dimer and contains a putative metal-binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0084628"}


id: PR:O74364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.03c","synonyms":[{"name":"Spom972h-adn1","type":"exact"}],"termid":"PR:O74364"}


id: PBO:0028586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_bundle_assembly","termid":"PBO:0028586"}


id: GO:1990065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the MEP pathway of IPP biosynthesis. It catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).","definition_xrefs":["GOC:bhm","PMID:15339150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Dxr protein complex","synonyms":[{"name":"1-deoxy-D-xylulose 5-phosphate reductoisomerase complex","type":"exact"}],"termid":"GO:1990065"}


id: PBO:0087349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body-related intermediate filament protein; forms cell cycle-specific filaments between spindle pole bodies in dividing cells; localizes to poles and microtubules of spindle during anaphase and contributes to spindle stability; involved in Glc7p localization and regulation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087349"}


id: PBO:0064770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 1 pseudogene 1","termid":"PBO:0064770"}


id: GO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl ethyl ketone biosynthetic process (obsolete GO:0046212)","synonyms":[{"name":"methyl ethyl ketone anabolism","type":"exact"},{"name":"methyl ethyl ketone biosynthesis","type":"exact"},{"name":"methyl ethyl ketone biosynthetic process","type":"exact"},{"name":"methyl ethyl ketone formation","type":"exact"},{"name":"methyl ethyl ketone synthesis","type":"exact"}],"termid":"GO:0046212"}


id: GO:0031892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 2 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 2 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 3 PACAP receptor binding","type":"exact"}],"termid":"GO:0031892"}


id: SO:0001569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_site_variant","synonyms":[{"name":"cryptic splice site activation","type":"exact"}],"termid":"SO:0001569"}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT05","SJAG_MIT06","SJAG_MIT07"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115167,115168,115175,115176],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: PBO:0044638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 1A","termid":"PBO:0044638"}


id: PBO:0074043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A25 antisense RNA 1","termid":"PBO:0074043"}


id: GO:0030126
data:
  {"annotated_genes":["SJAG_04070","SJAG_02234","SJAG_04002","SJAG_04474","SJAG_04569","SJAG_01508","SJAG_04391","SJAG_00192","SJAG_02482"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89419,94647,94738,99454,100304,103307,109946,112556,113556],"is_not":false,"summary":null,"term":"GO:0030126"}]},"cv_name":"cellular_component","definition":"One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.","definition_xrefs":["GOC:mah","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coat","termid":"GO:0030120"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_01508":null,"SJAG_02234":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04569":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0031410","GO:0005794","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"COPI vesicle coat","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0017167"],"synonyms":[{"name":"coatomer","type":"exact"}],"termid":"GO:0030126","terms_by_termid":{"GO:0030126":null}}


id: PBO:0084048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein; negatively regulates RAS by converting it from GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions, mediates membrane association of adenylate cyclase; mutations cause catalase T deficiency, defective glycogen synthesis and defective trehalose accumulation; IRA1 has a paralog, IRA2, that arose from the whole genome duplication; defects in human homolog NF1 are associated with neurofibromatosis","termid":"PBO:0084048"}


id: PBO:0061997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily F member 2","termid":"PBO:0061997"}


id: GO:0048535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:add","ISBN:068340007X","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph node development","synonyms":[{"name":"lymph gland development","type":"broad"}],"termid":"GO:0048535"}


id: GO:1905285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a fibrous ring of heart is generated and organized.","definition_xrefs":["GOC:TermGenie","GO_REF:0000083","GOC:rl","GOC:BHF","PMID:16037571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibrous ring of heart morphogenesis","synonyms":[{"name":"Lower's ring morphogenesis","type":"related"},{"name":"annulus fibrosus cordis morphogenesis","type":"related"},{"name":"anulus fibrosus cordis morphogenesis","type":"related"},{"name":"anulus fibrosus of heart morphogenesis","type":"exact"},{"name":"aortic annulus morphogenesis","type":"related"},{"name":"atrioventricular ring morphogenesis","type":"related"},{"name":"coronary tendon morphogenesis","type":"related"}],"termid":"GO:1905285"}


id: PBO:0038754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 antisense RNA 1","termid":"PBO:0038754"}


id: GO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An octomeric protein complex having creatine kinase activity.","definition_xrefs":["PMID:16236486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine kinase complex","termid":"GO:0002185"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial creatine kinase complex","termid":"GO:0002187"}


id: PBO:0063034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK1 interacting protein 1","termid":"PBO:0063034"}


id: FYPO:0003502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing raffinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on raffinose carbon source","termid":"FYPO:0001162"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002060","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on raffinose carbon source","synonyms":[{"name":"abolished growth on raffinose carbon source","type":"broad"},{"name":"abolished raffinose utilization","type":"related"},{"name":"abolished vegetative cell population growth on raffinose carbon source","type":"exact"},{"name":"cell population growth on raffinose carbon source abolished","type":"exact"}],"termid":"FYPO:0003502"}


id: PBO:0053373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 298","termid":"PBO:0053373"}


id: GO:1900164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding to an activin receptor on the surface of a target cell, which contributes to the establishment of lateral mesoderm with respect to the left and right halves.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900164)","synonyms":[{"name":"nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900164"}


id: GO:1902543
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103421],"is_not":false,"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to mitotic spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:22809626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to spindle pole body","termid":"GO:1902364"},{"relation_name":"is_a","term_name":"regulation of protein localization to mitotic spindle pole body","termid":"GO:1902542"},{"relation_name":"negatively_regulates","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"down regulation of protein localization to mitotic spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation in mitotic spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"down-regulation of protein localization to mitotic spindle pole body","type":"exact"},{"name":"downregulation of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"downregulation of protein localization to mitotic spindle pole body","type":"exact"},{"name":"inhibition of protein localisation to mitotic spindle pole body","type":"narrow"},{"name":"inhibition of protein localization to mitotic spindle pole body","type":"narrow"},{"name":"negative regulation of protein localisation to mitotic spindle pole body","type":"exact"}],"termid":"GO:1902543","terms_by_termid":{"GO:1902543":null}}


id: PBO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase (predicted)","termid":"PBO:0001802"}


id: GO:0019882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15771591","PMID:15928678","GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation","secondary_identifiers":["Wikipedia:Antigen_presentation","GO:0030333"],"synonyms":[{"name":"antigen presentation","type":"exact"},{"name":"antigen processing","type":"exact"}],"termid":"GO:0019882"}


id: PBO:0084485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific MAPK inhibitor; binds Smk1p during meiosis I; links APC/C-Ama1 to Smk1p activation; required for sporulation; transcript is induced 7.5 hr after induction of meiosis; Isc10p is ubiquitylated and degraded in an Ama1p-dependent manner upon completion of meiosis II","termid":"PBO:0084485"}


id: PBO:0062873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 7B","termid":"PBO:0062873"}


id: PBO:0012303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012303"}


id: GO:0102001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-isoleucine + 2 O2 + 2 NADPH(4-) + 2 H+ = (E)-2-methylbutanal oxime + 2 NADP(3-) + carbon dioxide + 3 H2O.","definition_xrefs":["EC:1.14.14.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"isoleucine N-monooxygenase (oxime forming) activity","secondary_identifiers":["MetaCyc:1.14.13.117-RXN","RHEA:28602"],"termid":"GO:0102001"}


id: PATO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An accumulation which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased accumulation","termid":"PATO:0002271"}


id: PBO:0035996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_aseptate_vegetative_cell","termid":"PBO:0035996"}


id: FYPO:0004464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to camptothecin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to CPT","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to camptothecin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to camptothecin","type":"exact"}],"termid":"FYPO:0004464"}


id: GO:0035974
data:
  {"annotated_genes":["SJAG_03048","SJAG_03287","SJAG_04143","SJAG_02368","SJAG_02332","SJAG_03544","SJAG_05309","SJAG_02286","SJAG_01370","SJAG_03835","SJAG_02169","SJAG_05260","SJAG_02561","SJAG_02529","SJAG_00794","SJAG_01483","SJAG_00113","SJAG_00405","SJAG_01805","SJAG_03092","SJAG_01760","SJAG_02624","SJAG_01546","SJAG_01662","SJAG_02248","SJAG_04010","SJAG_02246","SJAG_04901","SJAG_00430","SJAG_05196","SJAG_02736","SJAG_01777","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83648,84007,85986,86939,87203,88494,89994,90067,91403,91504,92960,93063,93769,95997,95998,96025,96088,96903,97023,98533,98996,99101,100313,101276,105808,107412,107592,107619,108828,110125,111299,113097,114270],"is_not":false,"summary":null,"term":"GO:0035974"}]},"cv_name":"cellular_component","definition":"The microtubule organizing center that forms as part of the meiotic cell cycle; functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:vw","PMID:21775631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00405":null,"SJAG_00430":null,"SJAG_00794":null,"SJAG_01370":null,"SJAG_01483":null,"SJAG_01546":null,"SJAG_01662":null,"SJAG_01760":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02246":null,"SJAG_02248":null,"SJAG_02286":null,"SJAG_02332":null,"SJAG_02368":null,"SJAG_02529":null,"SJAG_02561":null,"SJAG_02624":null,"SJAG_02736":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03544":null,"SJAG_03835":null,"SJAG_04010":null,"SJAG_04143":null,"SJAG_04901":null,"SJAG_05196":null,"SJAG_05260":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035974","terms_by_termid":{"GO:0035974":null}}


id: PBO:0057554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 670","termid":"PBO:0057554"}


id: PBO:0068388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 207","termid":"PBO:0068388"}


id: GO:0015040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that links acyl-CoA dehydrogenase reactions with the respiratory chain, such as in the fatty acid degradation pathway.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group I (obsolete GO:0015040)","synonyms":[{"name":"electron transfer flavoprotein, group I","type":"exact"}],"termid":"GO:0015040"}


id: GO:0098017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral capsid that comprises the most common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the hexameric capsomeres are major subunits.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsomere","termid":"GO:0046727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, major subunit","synonyms":[{"name":"major capsomere","type":"exact"},{"name":"major head protein","type":"related"}],"termid":"GO:0098017"}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: FYPO:0003258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"},{"relation_name":"is_a","term_name":"abnormal proline import","termid":"FYPO:0003256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased proline import","synonyms":[{"name":"increased L-proline import","type":"narrow"},{"name":"increased L-proline import across plasma membrane","type":"exact"},{"name":"increased proline import during mitotic cell cycle","type":"related"},{"name":"increased proline import during vegetative growth","type":"exact"},{"name":"increased proline import into cell","type":"exact"},{"name":"increased proline uptake","type":"exact"}],"termid":"FYPO:0003258"}


id: GO:0061682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a seminal vesicle are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"seminal vesicle development","termid":"GO:0061107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle morphogenesis","termid":"GO:0061682"}


id: PBO:0087915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in regulating gluconeogenesis; also involved in the regulation of glyoxylate cycle genes; member of the zinc cluster family of proteins; confers resistance to ketoconazole","termid":"PBO:0087915"}


id: GO:1901386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated calcium channel","type":"broad"},{"name":"downregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"downregulation of voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated calcium channel","type":"broad"},{"name":"inhibition of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"inhibition of voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of voltage-gated calcium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated calcium ion channel activity","type":"exact"},{"name":"inhibition of voltage-sensitive calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated calcium channel","type":"broad"},{"name":"negative regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"negative regulation of voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901386"}


id: PBO:0108836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase activating complex subunit Iml1","termid":"PBO:0108836"}


id: FYPO:0001808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal adenine import","termid":"FYPO:0001807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased adenine import","synonyms":[{"name":"decreased adenine import across plasma membrane","type":"exact"},{"name":"decreased adenine import during mitotic cell cycle","type":"related"},{"name":"decreased adenine import during vegetative growth","type":"exact"},{"name":"decreased adenine import into cell","type":"exact"},{"name":"decreased adenine uptake","type":"exact"},{"name":"reduced adenine import","type":"exact"}],"termid":"FYPO:0001808"}


id: PBO:0052717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 9","termid":"PBO:0052717"}


id: PBO:0084904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); has similarity to mammalian PP1Ks; involved in mitophagy; null mutant is sensitive to rapamycin and has decreased phosphorylation of the Pda1 subunit of pyruvate dehydrogenase","termid":"PBO:0084904"}


id: GO:0150089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and one or more dendritic spines.","definition_xrefs":["PMID:29774619","GOC:bc","PMID:7482800","PMID:22028887","PMID:11466428","GOC:aruk","PMID:11248111","PMID:10586883","PMID:18501438","PMID:8366344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization","synonyms":[{"name":"multi-synapse organisation","type":"broad"},{"name":"multi-synapse organization","type":"broad"},{"name":"multi-synaptic organisation","type":"broad"},{"name":"multi-synaptic organization","type":"broad"},{"name":"multiple spine synapse organisation","type":"exact"},{"name":"multisynapse organisation","type":"broad"},{"name":"multisynapse organization","type":"broad"},{"name":"multisynaptic organisation","type":"broad"},{"name":"multisynaptic organization","type":"broad"}],"termid":"GO:0150089"}


id: GO:0018699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1,1-trichloroethane + 2 H+ + 2 e- = 1,1-dichloroethane + HCl.","definition_xrefs":["UM-BBD_reactionID:r1007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,1,1-trichloroethane reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0018699"}


id: PBO:0089607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine/threonine protein phosphatase PP2C catalytic subunit Ptc4","termid":"PBO:0089607"}


id: PBO:0066744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 42","termid":"PBO:0066744"}


id: GO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle contraction","synonyms":[{"name":"activation of uterine smooth muscle contraction","type":"narrow"},{"name":"positive regulation of myometrial contraction","type":"exact"},{"name":"positive regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"positive regulation of myometrium contraction","type":"exact"},{"name":"stimulation of uterine smooth muscle contraction","type":"narrow"},{"name":"up regulation of uterine smooth muscle contraction","type":"exact"},{"name":"up-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"upregulation of uterine smooth muscle contraction","type":"exact"}],"termid":"GO:0070474"}


id: PBO:0053240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 4","termid":"PBO:0053240"}


id: FYPO:0005714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:17538026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"},{"relation_name":"is_a","term_name":"premature protein localization to nucleus during vegetative growth","termid":"FYPO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"premature protein localization to nucleolus","synonyms":[{"name":"advanced protein localization to nucleolus","type":"exact"},{"name":"precocious protein localization to nucleolus","type":"related"},{"name":"premature protein localisation to nucleolus","type":"exact"},{"name":"premature protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"premature protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0005714"}


id: GO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-citramalyl-CoA = pyruvate + acetyl-CoA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-citramalyl-CoA lyase activity","secondary_identifiers":["MetaCyc:RXN-13231","RHEA:38275","EC:4.1.3.46"],"synonyms":[{"name":"Ccl","type":"related"},{"name":"R-citramalyl-CoA lyase activity","type":"exact"}],"termid":"GO:0044101"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: GO:0042976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["PMID:12479803","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"},{"relation_name":"part_of","term_name":"positive regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of Janus kinase activity","secondary_identifiers":["GO:0042977","GO:0010531"],"synonyms":[{"name":"activation of JAK protein","type":"exact"},{"name":"activation of JAK protein by tyrosine phosphorylation","type":"exact"},{"name":"activation of JAK1 kinase activity","type":"narrow"},{"name":"activation of JAK1 protein","type":"narrow"},{"name":"activation of JAK2 kinase activity","type":"narrow"},{"name":"activation of JAK2 protein","type":"narrow"},{"name":"positive regulation of JAK protein activity by tyrosine phosphorylation","type":"exact"},{"name":"tyrosine phosphorylation of JAK protein","type":"exact"},{"name":"tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0042976"}


id: GO:1990183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory process that occurs at the level of the lymphatic vasculature.","definition_xrefs":["PMID:21576390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}


id: GO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin B17, a bactericidal peptide (antibiotic) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:11292337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcin transport","termid":"GO:0042884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"microcin B17 transport","termid":"GO:0042885"}


id: PBO:0029408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h-_cells","termid":"PBO:0029408"}


id: PR:Q10411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.06c","synonyms":[{"name":"Spom972h-spo15","type":"exact"}],"termid":"PR:Q10411"}


id: GO:0010798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a multivesicular body as part of the chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multivesicular body size","termid":"GO:0010796"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of multivesicular body size involved in ubiquitin-dependent protein catabolism","termid":"GO:0010798"}


id: PBO:0076577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 5","termid":"PBO:0076577"}


id: SO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon flanked by long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_retrotransposon","synonyms":[{"name":"LTR retrotransposon","type":"exact"},{"name":"long terminal repeat retrotransposon","type":"exact"}],"termid":"SO:0000186"}


id: GO:0004801
data:
  {"annotated_genes":["SJAG_04263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110011],"is_not":false,"summary":null,"term":"GO:0004801"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate.","definition_xrefs":["RHEA:17053","PMID:7592346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016744","GO:0003824"],"is_obsolete":false,"name":"transaldolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5659989","Reactome:R-HSA-71334","EC:2.2.1.2","Reactome:R-HSA-163764","MetaCyc:TRANSALDOL-RXN","Reactome:R-HSA-5659998"],"synonyms":[{"name":"dihydroxyacetone transferase activity","type":"broad"},{"name":"dihydroxyacetonetransferase activity","type":"broad"},{"name":"glycerone transferase activity","type":"broad"},{"name":"sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity","type":"exact"}],"termid":"GO:0004801","terms_by_termid":{"GO:0004801":null}}


id: PBO:0056452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 4","termid":"PBO:0056452"}


id: PBO:0043063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRFAM7A pseudogene 1","termid":"PBO:0043063"}


id: PBO:0108711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF Ste6","termid":"PBO:0108711"}


id: PBO:0062967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 10","termid":"PBO:0062967"}


id: PBO:0067858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 160","termid":"PBO:0067858"}


id: PBO:0087023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11A; expressed at twice the level of Rpl11Bp; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11A has a paralog, RPL11B, that arose from the whole genome duplication","termid":"PBO:0087023"}


id: GO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"abscisic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-695"],"synonyms":[{"name":"abscisic acid anabolism","type":"exact"},{"name":"abscisic acid biosynthesis","type":"exact"},{"name":"abscisic acid formation","type":"exact"},{"name":"abscisic acid synthesis","type":"exact"}],"termid":"GO:0009688"}


id: GO:0034953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: perillyl-CoA + H2O = 2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"perillyl-CoA hydratase activity","termid":"GO:0034953"}


id: GO:0016105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"triterpenoid catabolic process","synonyms":[{"name":"triterpene catabolic process","type":"narrow"},{"name":"triterpene catabolism","type":"narrow"},{"name":"triterpenoid breakdown","type":"exact"},{"name":"triterpenoid catabolism","type":"exact"},{"name":"triterpenoid degradation","type":"exact"}],"termid":"GO:0016105"}


id: GO:0010389
data:
  {"annotated_genes":["SJAG_01084","SJAG_03592","SJAG_03927","SJAG_02392","SJAG_00883","SJAG_00082","SJAG_01044","SJAG_00640","SJAG_03067","SJAG_06592","SJAG_04486","SJAG_04280","SJAG_01010","SJAG_04332","SJAG_00600","SJAG_00216","SJAG_01076","SJAG_01805","SJAG_01146","SJAG_01901","SJAG_01837","SJAG_04597","SJAG_01000","SJAG_00364","SJAG_04671","SJAG_03942","SJAG_03309","SJAG_04394","SJAG_01605","SJAG_01855","SJAG_00526","SJAG_03073","SJAG_00214","SJAG_04140","SJAG_03602","SJAG_02576","SJAG_01873","SJAG_02858","SJAG_03854","SJAG_02592","SJAG_02098","SJAG_00318","SJAG_02771","SJAG_00117","SJAG_02563","SJAG_00256","SJAG_02074","SJAG_02332","SJAG_02266","SJAG_01680","SJAG_01429","SJAG_03486","SJAG_03126","SJAG_01205","SJAG_03160","SJAG_01118","SJAG_03026","SJAG_05373","SJAG_03048","SJAG_04287","SJAG_02342","SJAG_02723","SJAG_03695","SJAG_01456"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98574,107395,108158],"is_not":false,"summary":null,"term":"GO:0010389"},{"annotations":[97616,90607,96713,86223,112184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[102802,113432,85353,90169,96714,95375,112243,90147,88732,105517,112981,113268,108227,87633,99508,95541,104028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[90737,94629,92051,112186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[86442,90149,107922,110445,97232,84794,105518,113188,85354,96715,113859,87993,102803,95542,87634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[89767,89123,97175,107755,104767,100679,86224,92053,102833,110446,108017,90567,89409,110652,107625,103199,108676,112187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[106540,112667,99679,84308,112855,103423,92520,90739,90570,104769,107393,84299,88338,87932,95185,90008,94630,90609,97943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[97566,84106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["PMID:17329565","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitotic entry","type":"exact"}],"termid":"GO:0010389","terms_by_termid":{"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null,"GO:1905287":null}}


id: PBO:0029782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_during_vegetative_growth","termid":"PBO:0029782"}


id: PBO:0110424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 3","termid":"PBO:0110424"}


id: PBO:0051537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 5","termid":"PBO:0051537"}


id: PR:Q10162
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An 18S rRNA (guanine-N(7))-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01394","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S rRNA (guanine-N(7))-methyltransferase bud23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.06","secondary_identifiers":["UniProtKB:Q10162"],"synonyms":[{"name":"Bud site selection protein 23 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-WBSCR22","type":"exact"}],"termid":"PR:Q10162"}


id: PBO:0069615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 892, pseudogene","termid":"PBO:0069615"}


id: PBO:0052315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0930","termid":"PBO:0052315"}


id: FYPO:0001235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth in a cell population occurs to a lower extent than normal, i.e. the population stops growing earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"decreased extent of cell population growth","synonyms":[{"name":"reduced extent of cell population growth","type":"exact"}],"termid":"FYPO:0001235"}


id: GO:1902228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:16705167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"activation of M-CSF signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"positive regulation of M-CSF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up regulation of M-CSF signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up-regulation of M-CSF signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"upregulation of M-CSF signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902228"}


id: GO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin silencing process that results in the inhibition of RNA polymerase II-transcribed genes located in the vicinity of tRNA genes.","definition_xrefs":["PMID:23707796","GOC:dph","PMID:30718362","PMID:30362930"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA locus-associated negative regulation of gene expression (obsolete GO:0061587)","synonyms":[{"name":"tDNA-mediated gene silencing","type":"exact"},{"name":"tRNA gene-mediated chromatin silencing","type":"exact"},{"name":"tRNA gene-mediated gene silencing","type":"exact"},{"name":"tgm silencing","type":"exact"},{"name":"transfer RNA gene-mediated chromatin silencing","type":"exact"},{"name":"transfer RNA gene-mediated gene silencing","type":"exact"},{"name":"transfer RNA gene-mediated silencinga","type":"exact"}],"termid":"GO:0061587"}


id: GO:0035573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal serine of proteins to form the derivative N,N,N-trimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine trimethylation","termid":"GO:0035573"}


id: PR:Q10296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.02 gene.","definition_xrefs":["UniProtKB:Q10296","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.02","synonyms":[{"name":"Spom972h-SPAC22H10.02","type":"exact"}],"termid":"PR:Q10296"}


id: PBO:0089936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A variant H2A.Z Pht1","termid":"PBO:0089936"}


id: PBO:0076719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor like 5","termid":"PBO:0076719"}


id: GO:0007579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence factor accumulation (obsolete GO:0007579)","synonyms":[{"name":"senescence factor accumulation","type":"exact"}],"termid":"GO:0007579"}


id: GO:0005133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II interferon receptor. Type II interferon is also known as interferon-gamma.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type II interferon receptor binding","synonyms":[{"name":"interferon-gamma","type":"narrow"},{"name":"interferon-gamma receptor binding","type":"exact"},{"name":"interferon-gamma receptor ligand","type":"narrow"}],"termid":"GO:0005133"}


id: PBO:0049117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 182","termid":"PBO:0049117"}


id: GO:2000230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pancreatic stellate cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast proliferation","termid":"GO:0048147"},{"relation_name":"is_a","term_name":"regulation of pancreatic stellate cell proliferation","termid":"GO:2000229"},{"relation_name":"negatively_regulates","term_name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic stellate cell proliferation","termid":"GO:2000230"}


id: GO:0005727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"extrachromosomal DNA","termid":"GO:0046821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal circular DNA","termid":"GO:0005727"}


id: GO:0051510
data:
  {"annotated_genes":["SJAG_00514","SJAG_02392","SJAG_03581","SJAG_02169","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92048,86091,90775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[86947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[111228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell elongation","type":"narrow"}],"termid":"GO:0051510","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0088310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase Ape2","termid":"PBO:0088310"}


id: GO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TRAIL production","termid":"GO:0032679"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of TRAIL production","secondary_identifiers":["GO:0045555"],"synonyms":[{"name":"down regulation of TRAIL production","type":"exact"},{"name":"down-regulation of TRAIL production","type":"exact"},{"name":"downregulation of TRAIL production","type":"exact"},{"name":"inhibition of TRAIL production","type":"narrow"},{"name":"negative regulation of TRAIL biosynthetic process","type":"narrow"}],"termid":"GO:0032719"}


id: PBO:0058983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT1 super elongation complex subunit","termid":"PBO:0058983"}


id: PBO:0063475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 3 pseudogene 2","termid":"PBO:0063475"}


id: PBO:0065083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis associated non-protein coding RNA induced by stress","termid":"PBO:0065083"}


id: PBO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A dioxygenase Ofd2","termid":"PBO:0017830"}


id: PBO:0042085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 152","termid":"PBO:0042085"}


id: PBO:0061548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C1B-RDH14 readthrough","termid":"PBO:0061548"}


id: PR:Q9P7F4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E1P3.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C2E1P3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.01","synonyms":[{"name":"Spom972h-SPAC2E1P3.01","type":"exact"}],"termid":"PR:Q9P7F4"}


id: GO:1901707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to leptomycin B.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"leptomycin B binding","termid":"GO:1901707"}


id: GO:0103054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A12 + O2 + 2-oxoglutarate = gibberellin A15 + carbon dioxide + succinate.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin A12, 2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A15-forming)","secondary_identifiers":["MetaCyc:RXN1F-162","RHEA:60776"],"termid":"GO:0103054"}


id: FYPO:0005165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is abnormal. Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PMID:17304223","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"abnormal replication foci dynamics","type":"related"},{"name":"abnormal replication focus organization","type":"related"},{"name":"abnormal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"abnormal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"abnormal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"abnormal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005165"}


id: PBO:0057189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 361","termid":"PBO:0057189"}


id: PBO:0065670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type S","termid":"PBO:0065670"}


id: GO:0071952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of O-phosphoserine charged on a tRNA(Cys) to cysteinyl-tRNA.","definition_xrefs":["PMID:18559341","GOC:jsg","PMID:17351629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA","termid":"GO:0071952"}


id: PBO:0054406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1802","termid":"PBO:0054406"}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["PubMed:9252331","PubMed:8839040","Unimod:354#W","OMSSA:85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: GO:1903724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centriole elongation.","definition_xrefs":["PMID:20616062","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of centriole replication","termid":"GO:0046601"},{"relation_name":"is_a","term_name":"regulation of centriole elongation","termid":"GO:1903722"},{"relation_name":"positively_regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"positive regulation of centriole elongation","synonyms":[{"name":"activation of centriole elongation","type":"narrow"},{"name":"up regulation of centriole elongation","type":"exact"},{"name":"up-regulation of centriole elongation","type":"exact"},{"name":"upregulation of centriole elongation","type":"exact"}],"termid":"GO:1903724"}


id: PBO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0013754"}


id: PBO:0074344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3","termid":"PBO:0074344"}


id: PBO:0036224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_resulting_in_complete_rereplication,_with_mitotic_cell_cycle_arrest","termid":"PBO:0036224"}


id: PBO:0072046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 16","termid":"PBO:0072046"}


id: GO:0030541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which plasmids are segregated or distributed into daughter cells upon cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid maintenance","termid":"GO:0006276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid partitioning","secondary_identifiers":["GO:0030542"],"termid":"GO:0030541"}


id: GO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-nitrotoluene, 1-methyl-4-nitrobenzene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-nitrotoluene metabolic process","termid":"GO:0019257"},{"relation_name":"is_a","term_name":"nitrotoluene catabolic process","termid":"GO:0046263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"4-nitrotoluene catabolic process","secondary_identifiers":["MetaCyc:P421-PWY"],"synonyms":[{"name":"4-nitrotoluene breakdown","type":"exact"},{"name":"4-nitrotoluene catabolism","type":"exact"},{"name":"4-nitrotoluene degradation","type":"exact"},{"name":"4NT catabolic process","type":"exact"},{"name":"4NT catabolism","type":"exact"}],"termid":"GO:0019258"}


id: FYECO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PMID:12653111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited thiamine","termid":"FYECO:0000105"}


id: MOD:01527
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced from a particular amino acid residue as the result of a fragmentation process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reporter fragment","termid":"MOD:01519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue reporter fragment","termid":"MOD:01527"}


id: GO:0035379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carbon dioxide (CO2) from one side of a membrane to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"carbon dioxide transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-1247649","Reactome:R-HSA-1237042","Reactome:R-HSA-1237069","Reactome:R-HSA-1247645"],"termid":"GO:0035379"}


id: GO:0006711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"estrogen metabolic process","termid":"GO:0008210"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"estrogen catabolic process","synonyms":[{"name":"estrogen breakdown","type":"exact"},{"name":"estrogen catabolism","type":"exact"},{"name":"estrogen degradation","type":"exact"},{"name":"oestrogen catabolic process","type":"exact"},{"name":"oestrogen catabolism","type":"exact"}],"termid":"GO:0006711"}


id: RO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"RO:0002436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylates","termid":"RO:0002447"}


id: GO:0039588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal processing and presentation of a peptide antigen on its cell surface in association with an MHC protein complex.","definition_xrefs":["VZ:815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host adaptive immune response","termid":"GO:0039504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host antigen processing and presentation","synonyms":[{"name":"suppression by virus of host antigen processing and presentation","type":"narrow"}],"termid":"GO:0039588"}


id: PBO:0044296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 5","termid":"PBO:0044296"}


id: PBO:0110115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ras-interacting protein with DIL domain, human RADIL and RASIP1 ortholog (predicted), implicated in cytoskeleton organization","termid":"PBO:0110115"}


id: PBO:0066098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASAL2 antisense RNA 1","termid":"PBO:0066098"}


id: PBO:0031591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_process","termid":"PBO:0031591"}


id: GO:0048014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an angiopoietin binding to the Tie receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11283723","GOC:ceb","GOC:signaling","PMID:11566266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Tie signaling pathway","synonyms":[{"name":"Tek receptor signaling","type":"exact"},{"name":"Tie receptor signaling pathway","type":"exact"},{"name":"Tie receptor signalling pathway","type":"exact"},{"name":"angiopoietin-Tie signaling pathway","type":"narrow"},{"name":"angiopoietin/Tie signaling pathway","type":"narrow"}],"termid":"GO:0048014"}


id: GO:1901461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"negatively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to formic acid","synonyms":[{"name":"down regulation of response to formic acid","type":"exact"},{"name":"down-regulation of response to formic acid","type":"exact"},{"name":"downregulation of response to formic acid","type":"exact"},{"name":"inhibition of response to formic acid","type":"narrow"}],"termid":"GO:1901461"}


id: GO:0140665
data:
  {"annotated_genes":["SJAG_00925","SJAG_02906","SJAG_02698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90812,92649,99753],"is_not":false,"summary":null,"term":"GO:0140665"}]},"cv_name":"molecular_function","definition":"A histone chaperone that carries a H3-H4 histone complex, driven by ATP hydrolysis.","definition_xrefs":["PMID:33658433","PMID:31848341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3-H4 histone complex chaperone activity","termid":"GO:0000510"},{"relation_name":"is_a","term_name":"ATP-dependent histone chaperone activity","termid":"GO:0140674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00925":null,"SJAG_02698":null,"SJAG_02906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0140597","GO:0140097","GO:0140104","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent H3-H4 histone complex chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent H3-H4 histone complex loader activity","type":"narrow"},{"name":"H3-H4 dimer loading activity","type":"exact"},{"name":"H3-H4 histone chaperone","type":"broad"},{"name":"H3-H4 histone complex loader activity","type":"broad"},{"name":"histone H3-H4 dimer loading activity","type":"exact"},{"name":"histone chaperone","type":"related"}],"termid":"GO:0140665","terms_by_termid":{"GO:0140665":null}}


id: PATO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000258 relative taste_acuity (obsolete PATO:0000258)","termid":"PATO:0000258"}


id: PBO:0053192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 1","termid":"PBO:0053192"}


id: PBO:0062521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily Q member 1 pseudogene","termid":"PBO:0062521"}


id: PBO:0031222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_heat","termid":"PBO:0031222"}


id: GO:0021818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The changes in the actin cytoskeleton that are necessary for the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:dph","PMID:12626695","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex radial glia guided migration (obsolete GO:0021818)","synonyms":[{"name":"modulation of the microfilament cytoskeleton involved in cell locomotion in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021818"}


id: FYPO:0005677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is lower than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased number of Rad52 foci during vegetative growth","termid":"FYPO:0004516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad52 foci during mitotic S phase","synonyms":[{"name":"decreased number of Rad22 foci during mitotic S phase","type":"exact"},{"name":"decreased number of Rad52 foci during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased number of Rad52 foci during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced number of Rad52 foci during mitotic S phase","type":"exact"}],"termid":"FYPO:0005677"}


id: PBO:0051814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF1R antisense imprinted non-protein coding RNA","termid":"PBO:0051814"}


id: GO:0070673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-18","synonyms":[{"name":"response to IL-18","type":"exact"}],"termid":"GO:0070673"}


id: GO:0014848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary tract. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary tract consists of organs of the body that produce and discharge urine. These include the kidneys, ureters, bladder, and urethra.","definition_xrefs":["GOC:mtg_muscle","MA:0000325","MSH:D014551","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}


id: GO:0009887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:go_curators","GOC:dgh","ISBN:0721662544","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ morphogenesis","synonyms":[{"name":"histogenesis and organogenesis","type":"broad"}],"termid":"GO:0009887"}


id: PATO:0000659
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000659 temparature_quantity (obsolete PATO:0000659)","termid":"PATO:0000659"}


id: GO:1905807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synapse pruning.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27779093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse pruning","synonyms":[{"name":"down regulation of synapse disassembly","type":"exact"},{"name":"down-regulation of synapse disassembly","type":"exact"},{"name":"downregulation of synapse disassembly","type":"exact"},{"name":"inhibition of synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905807"}


id: PBO:0050309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 11","termid":"PBO:0050309"}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GO_REF:0000059","GOC:rn","GOC:TermGenie","PMID:25359770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"regulation of phosphatidate phosphatase activity","termid":"GO:1903730"},{"relation_name":"part_of","term_name":"positive regulation of triglyceride biosynthetic process","termid":"GO:0010867"},{"relation_name":"part_of","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidate phosphatase activity","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: PBO:0085668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair (NER); homologous to RAD4","termid":"PBO:0085668"}


id: PBO:0081763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF692 divergent transcript","termid":"PBO:0081763"}


id: PBO:0013465
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similarity to YCL030C is at the C-term, S. pombe his7 is similar to YCl030C at the N-term","termid":"PBO:0013465"}


id: PBO:0110390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 59","termid":"PBO:0110390"}


id: PBO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3m","termid":"PBO:0000321"}


id: PBO:0051723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor related receptor","termid":"PBO:0051723"}


id: GO:1990302
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of Bre1 and Rad6 that mediates monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation, elongation by RNA polymerase II, telomeric silencing, and is also a prerequisite for H3K4me and H3K79me formation. It thereby plays a central role in histone code and gene regulation. It also modulates the formation of double-strand breaks during meiosis.","definition_xrefs":["PMID:19531475","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Bre1-Rad6 ubiquitin ligase complex","synonyms":[{"name":"Bre1-Rad6 complex","type":"exact"}],"termid":"GO:1990302"}


id: GO:0003426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in growth plate cartilage chondrocyte division","termid":"GO:0003424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007163","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"}


id: PBO:0068921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 164, pseudogene","termid":"PBO:0068921"}


id: PBO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 26","termid":"PBO:0071608"}


id: GO:0031609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two inner rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, beta-subunit complex","termid":"GO:0019774"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"cytosolic proteasome core complex, beta-subunit complex","termid":"GO:0031609"}


id: GO:0018730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (E)-glutaconate = acetate + glutaconyl-1-CoA.","definition_xrefs":["EC:2.8.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glutaconate CoA-transferase activity","secondary_identifiers":["MetaCyc:GLUTACONATE-COA-TRANSFERASE-RXN","RHEA:23208","UM-BBD_reactionID:r0085"],"synonyms":[{"name":"acetyl-CoA:(E)-glutaconate CoA-transferase activity","type":"related"}],"termid":"GO:0018730"}


id: PR:O13903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21321:SF1","OMA:SCHPO00475","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.12c","secondary_identifiers":["UniProtKB:O13903"],"synonyms":[{"name":"Spom972h-EXOSC3","type":"exact"},{"name":"ribosomal RNA-processing protein 40 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13903"}


id: PBO:0043214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 7","termid":"PBO:0043214"}


id: PBO:0040188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 1","termid":"PBO:0040188"}


id: PBO:0030053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ansamitocin_P-3","termid":"PBO:0030053"}


id: PBO:0063873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 2","termid":"PBO:0063873"}


id: FYPO:0007307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation at centromere during vegetative growth","termid":"FYPO:0000893"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K14 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007307"}


id: PBO:0108990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin like 1","termid":"PBO:0108990"}


id: PBO:0063314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated HIP1 interacting lncRNA","termid":"PBO:0063314"}


id: PR:Q9HGL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Ts, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11741:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Ts, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.07c","secondary_identifiers":["UniProtKB:Q9HGL5"],"synonyms":[{"name":"EF-Ts (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"EF-TsMt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC800.07c","type":"related"},{"name":"Spom972h-TSFM","type":"exact"}],"termid":"PR:Q9HGL5"}


id: GO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.","definition_xrefs":["EC:4.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase activity","synonyms":[{"name":"PEP carboxykinase activity","type":"related"},{"name":"PEPCK activity","type":"related"},{"name":"phosphopyruvate carboxylase activity","type":"related"}],"termid":"GO:0004611"}


id: GO:1900352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanofuran biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of pteridine metabolic process","termid":"GO:0045863"},{"relation_name":"is_a","term_name":"regulation of methanofuran biosynthetic process","termid":"GO:1900351"},{"relation_name":"is_a","term_name":"negative regulation of methanofuran metabolic process","termid":"GO:1900355"},{"relation_name":"negatively_regulates","term_name":"methanofuran biosynthetic process","termid":"GO:2001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanofuran biosynthetic process","synonyms":[{"name":"down regulation of methanofuran biosynthesis","type":"exact"},{"name":"down regulation of methanofuran biosynthetic process","type":"exact"},{"name":"down-regulation of methanofuran biosynthesis","type":"exact"},{"name":"down-regulation of methanofuran biosynthetic process","type":"exact"},{"name":"downregulation of methanofuran biosynthesis","type":"exact"},{"name":"downregulation of methanofuran biosynthetic process","type":"exact"},{"name":"inhibition of methanofuran biosynthesis","type":"exact"},{"name":"inhibition of methanofuran biosynthetic process","type":"narrow"},{"name":"negative regulation of methanofuran biosynthesis","type":"exact"}],"termid":"GO:1900352"}


id: PBO:0056256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALL pseudogene 1","termid":"PBO:0056256"}


id: GO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis","synonyms":[{"name":"activation of receptor mediated endocytosis","type":"narrow"},{"name":"positive regulation of receptor mediated endocytosis","type":"exact"},{"name":"stimulation of receptor mediated endocytosis","type":"narrow"},{"name":"up regulation of receptor mediated endocytosis","type":"exact"},{"name":"up-regulation of receptor mediated endocytosis","type":"exact"},{"name":"upregulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048260"}


id: PBO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 1","termid":"PBO:0060730"}


id: GO:0102905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = (+)-valencene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"valencene synthase activity","secondary_identifiers":["RHEA:29511","MetaCyc:RXN-8608"],"termid":"GO:0102905"}


id: PBO:0075617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 2C","termid":"PBO:0075617"}


id: GO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from choline","secondary_identifiers":["MetaCyc:CHOLINE-BETAINE-ANA-PWY","MetaCyc:BETSYN-PWY","MetaCyc:P542-PWY"],"synonyms":[{"name":"N-trimethylglycine biosynthesis from choline","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from choline","type":"exact"},{"name":"choline oxidation","type":"exact"},{"name":"glycine betaine anabolism from choline","type":"exact"},{"name":"glycine betaine formation from choline","type":"exact"},{"name":"glycine betaine synthesis from choline","type":"exact"}],"termid":"GO:0019285"}


id: PBO:0073044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 2","termid":"PBO:0073044"}


id: SO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated because it is chimeric.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_chimeric_cDNA","termid":"SO:0000362"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chimeric_cDNA_clone","synonyms":[{"name":"chimeric cDNA clone","type":"exact"}],"termid":"SO:0000810"}


id: GO:0080113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth of the seed of an plant.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"seed growth","termid":"GO:0080112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed growth","synonyms":[{"name":"regulation of seed size","type":"exact"}],"termid":"GO:0080113"}


id: PR:O42918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.13","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-meu7","type":"exact"},{"name":"meiotic expression up-regulated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42918"}


id: GO:0047566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrophenyl-3-ketovalidamine = 4-nitroaniline + 5-D-(5/6)-5-C-(hydroxymethyl)-2,6-dihydroxycyclohex-2-en-1-one + H+.","definition_xrefs":["RHEA:22768","EC:4.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-ketovalidoxylamine C-N-lyase activity","secondary_identifiers":["KEGG_REACTION:R04367","MetaCyc:3-KETOVALIDOXYLAMINE-C-N-LYASE-RXN"],"synonyms":[{"name":"3-ketovalidoxylamine A C-N-lyase activity","type":"related"},{"name":"4-nitrophenyl-3-ketovalidamine 4-nitroaniline-lyase [5-D-(5/6)-5-C-(hydroxymethyl)-2,6-dihydroxycyclohex-2-en-1-one-forming]","type":"related"},{"name":"4-nitrophenyl-3-ketovalidamine 4-nitroaniline-lyase activity","type":"related"},{"name":"p-nitrophenyl-3-ketovalidamine p-nitroaniline lyase activity","type":"related"}],"termid":"GO:0047566"}


id: PATO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's scalar absolute value of the rate of change of the bearer's position.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speed","synonyms":[{"name":"velocity","type":"related"}],"termid":"PATO:0000008"}


id: GO:0015218
data:
  {"annotated_genes":["SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95484],"is_not":false,"summary":null,"term":"GO:0015218"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyrimidine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015218","terms_by_termid":{"GO:0015218":null}}


id: GO:0141152
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90187,102683],"is_not":false,"summary":null,"term":"GO:0141152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:11092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00842","MetaCyc:1.1.1.8-RXN","EC:1.1.1.8"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"NAD-L-glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-alpha-glycerophosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-linked glycerol 3-phosphate dehydrogenase activity","type":"exact"},{"name":"NADH-dihydroxyacetone phosphate reductase activity","type":"exact"},{"name":"alpha-glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"alpha-glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol 1-phosphate dehydrogenase activity","type":"broad"},{"name":"glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase [NAD+] activity","type":"exact"},{"name":"glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0141152","terms_by_termid":{"GO:0141152":null}}


id: PBO:0040612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 1","termid":"PBO:0040612"}


id: PBO:0081431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285","termid":"PBO:0081431"}


id: PBO:0053690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 885","termid":"PBO:0053690"}


id: GO:0071709
data:
  {"annotated_genes":["SJAG_04080","SJAG_02529","SJAG_01050","SJAG_00826","SJAG_00663","SJAG_02320","SJAG_04922","SJAG_03783","SJAG_01242","SJAG_00114","SJAG_00900","SJAG_00416","SJAG_04275","SJAG_04010","SJAG_02241","SJAG_01745","SJAG_01769","SJAG_03536","SJAG_02736","SJAG_01467","SJAG_03688","SJAG_03746","SJAG_04781","SJAG_05207","SJAG_02248","SJAG_02169","SJAG_04470","SJAG_03915","SJAG_00971","SJAG_03892","SJAG_04489","SJAG_03891","SJAG_04615"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113101,103574,93743,95016,110127,87494,106315,115149,114675,114968,91572,97894,101466,93784,96005,96074,96006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[92167,87547,94156,99919,97072,84207,115746,99334,115743,115744,102747,115745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"},{"annotations":[92839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031468"},{"annotations":[86949],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[102193,90702,96009,96010,112151,96293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00416":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00900":null,"SJAG_00971":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04489":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"membrane assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32243490":null},"termid":"GO:0071709","terms_by_termid":{"GO:0007084":null,"GO:0031468":null,"GO:0032120":null,"GO:0070583":null,"GO:1903024":null}}


id: PBO:0048498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglioside induced differentiation associated protein 1 like 1","termid":"PBO:0048498"}


id: FYPO:0005618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of repair of double-strand breaks formed as part of meiotic recombination is longer than normal.","definition_xrefs":["PomBase:mah","PMID:18378696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"increased duration of meiotic recombination double-strand break repair","synonyms":[{"name":"increased duration of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair during meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"prolonged meiotic recombination double-strand break repair","type":"exact"}],"termid":"FYPO:0005618"}


id: PBO:0055001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2416","termid":"PBO:0055001"}


id: GO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"asperthecin biosynthetic process","synonyms":[{"name":"asperthecin biosynthesis","type":"exact"},{"name":"asperthecin formation","type":"exact"},{"name":"asperthecin synthesis","type":"exact"}],"termid":"GO:0036184"}


id: PBO:0063974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 8","termid":"PBO:0063974"}


id: PBO:0002784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1716 family protein","termid":"PBO:0002784"}


id: PBO:0041989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 33","termid":"PBO:0041989"}


id: GO:1990463
data:
  {"annotated_genes":["SJAG_00596","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96263,100707],"is_not":false,"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"A protein complex that is anchored at the cortical face of the plasma membrane, and contains proteins involved in regulating cell cycle progression. In Schizosaccharomyces pombe, lateral cortical nodes are several megadaltons in size, and contain Slf1, which anchors the complex at the membrane, and the methyltransferase Skb1 in stoichiometric quantities, and may contain other proteins.","definition_xrefs":["GOC:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"lateral cell cortex","termid":"GO:0097575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node","type":"exact"}],"termid":"GO:1990463","terms_by_termid":{"GO:1990463":null}}


id: GO:0031935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that affects the rate, extent or location of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin silencing (obsolete GO:0031935)","synonyms":[{"name":"regulation of heterochromatic silencing","type":"related"}],"termid":"GO:0031935"}


id: PBO:0047619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIG4 phosphoinositide 5-phosphatase","termid":"PBO:0047619"}


id: GO:0072592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diatomic oxygen (O2).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxygen metabolic process","synonyms":[{"name":"diatomic oxygen metabolic process","type":"exact"},{"name":"oxygen metabolism","type":"exact"}],"termid":"GO:0072592"}


id: PBO:0011061
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approved_timestamp","termid":"PBO:0011061"}


id: PBO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 2","termid":"PBO:0060780"}


id: FYPO:0001082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall beta-glucan level","synonyms":[{"name":"decreased cell wall beta-D-glucan level","type":"exact"},{"name":"decreased cell wall beta-glucan accumulation","type":"related"},{"name":"decreased cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall beta-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall beta-glucan level","type":"exact"}],"termid":"FYPO:0001082"}


id: PBO:0045446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 2","termid":"PBO:0045446"}


id: GO:0051095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of helicase activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of helicase activity","termid":"GO:0051095"}


id: GO:0051694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a protein or protein complex to the pointed (or minus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament capping","termid":"GO:0051693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0007010","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"pointed-end actin filament capping","synonyms":[{"name":"minus-end F-actin capping activity","type":"exact"},{"name":"minus-end actin filament capping activity","type":"exact"},{"name":"pointed-end F-actin capping activity","type":"exact"},{"name":"pointed-end actin capping activity","type":"exact"}],"termid":"GO:0051694"}


id: PBO:0035879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0035879"}


id: GO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal straight tubule over time, from its formation to the mature structure. The proximal straight tubule is the part of the descending limb that extends from the proximal convoluted tubule to the descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal straight tubule development","synonyms":[{"name":"S3 development","type":"exact"}],"termid":"GO:0072020"}


id: PR:O94247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein SMUBP-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04870","PRO:DNx","PANTHER:PTHR10887:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.07c","secondary_identifiers":["UniProtKB:O94247"],"synonyms":[{"name":"Spom972h-IGHMBP2","type":"exact"}],"termid":"PR:O94247"}


id: GO:0008165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrethroid resistance (obsolete GO:0008165)","synonyms":[{"name":"pyrethroid resistance","type":"exact"}],"termid":"GO:0008165"}


id: PBO:0088732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb5","termid":"PBO:0088732"}


id: GO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of events leading from the formation of activated factor X to the formation of active thrombin, the cleavage of fibrinogen by thrombin, and the formation of cleaved fibrin into a stable multimeric, cross-linked complex.","definition_xrefs":["GOC:add","GOC:pde","GOC:mah","PMID:1931959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"blood coagulation, common pathway","termid":"GO:0072377"}


id: PBO:0036213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitinated_protein_absent_from_cell_during_vegetative_growth","termid":"PBO:0036213"}


id: FYPO:0007179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is detected abnormally distributed throughout the cell cortex during interphase of the mitotic cell cycle. The protein may normally be restricted to part of the cell cortex, or not normally located in the cell cortex at all.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized protein distributed in cell cortex during mitotic interphase","synonyms":[{"name":"mislocalised protein distributed in cell cortex during mitotic interphase","type":"exact"},{"name":"mislocalized protein distributed at cell surface during mitotic interphase","type":"related"},{"name":"mislocalized protein distributed in cell cortex during interphase of mitotic cell cycle","type":"exact"},{"name":"mislocalized protein distributed in cell cortex during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007179"}


id: PBO:0055788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase","termid":"PBO:0055788"}


id: PBO:0080950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 4","termid":"PBO:0080950"}


id: GO:0004453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl (2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate + H2O = (2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate + methanol. A carboxylesterase that hydrolyzes the ester linkage of juvenile hormone.","definition_xrefs":["PMID:11267890","RHEA:16393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"juvenile-hormone esterase activity","secondary_identifiers":["EC:3.1.1.59","MetaCyc:JUVENILE-HORMONE-ESTERASE-RXN"],"synonyms":[{"name":"JH esterase activity","type":"related"},{"name":"JH-esterase activity","type":"related"},{"name":"juvenile hormone analog esterase activity","type":"related"},{"name":"juvenile hormone carboxyesterase activity","type":"related"},{"name":"methyl-(2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate acylhydrolase activity","type":"related"}],"termid":"GO:0004453"}


id: GO:0008810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.","definition_xrefs":["EC:3.2.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"cellulase activity","secondary_identifiers":["MetaCyc:RXN-2043"],"synonyms":[{"name":"1,4-(1,3;1,4)-beta-D-glucan 4-glucanohydrolase activity","type":"related"},{"name":"9.5 cellulase activity","type":"related"},{"name":"alkali cellulase activity","type":"narrow"},{"name":"avicelase activity","type":"related"},{"name":"beta-1,4-endoglucan hydrolase activity","type":"broad"},{"name":"beta-1,4-glucanase activity","type":"broad"},{"name":"carboxymethyl cellulase activity","type":"narrow"},{"name":"celluase A","type":"related"},{"name":"celludextrinase activity","type":"related"},{"name":"cellulase A 3","type":"related"},{"name":"cellulosin AP","type":"related"},{"name":"endo-1,4-beta-D-glucanase activity","type":"broad"},{"name":"endo-1,4-beta-D-glucanohydrolase activity","type":"broad"},{"name":"endo-1,4-beta-glucanase activity","type":"broad"},{"name":"endoglucanase D","type":"related"},{"name":"endoglucanase activity","type":"broad"},{"name":"pancellase SS","type":"related"}],"termid":"GO:0008810"}


id: GO:0070624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of thiamine biosynthetic process","termid":"GO:0070623"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"negative regulation of thiamine biosynthetic process","synonyms":[{"name":"down regulation of thiamine biosynthetic process","type":"exact"},{"name":"down-regulation of thiamine biosynthetic process","type":"exact"},{"name":"downregulation of thiamine biosynthetic process","type":"exact"},{"name":"inhibition of thiamine biosynthetic process","type":"narrow"},{"name":"negative regulation of thiamin biosynthetic process","type":"exact"},{"name":"negative regulation of thiamine anabolism","type":"exact"},{"name":"negative regulation of thiamine biosynthesis","type":"exact"},{"name":"negative regulation of thiamine formation","type":"exact"},{"name":"negative regulation of thiamine synthesis","type":"exact"}],"termid":"GO:0070624"}


id: GO:1904166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cholesterol homeostasis.","definition_xrefs":["PMID:22541436","GOC:rph","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol homeostasis (obsolete GO:1904166)","synonyms":[{"name":"down regulation of cholesterol homeostasis","type":"exact"},{"name":"down-regulation of cholesterol homeostasis","type":"exact"},{"name":"downregulation of cholesterol homeostasis","type":"exact"},{"name":"inhibition of cholesterol homeostasis","type":"narrow"}],"termid":"GO:1904166"}


id: PBO:0089208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase NADPH flavoprotein subunit","termid":"PBO:0089208"}


id: PBO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K9_specific)_activity","termid":"PBO:0036067"}


id: PBO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Leyden crystal protein pseudogene 2","termid":"PBO:0043240"}


id: PBO:0065205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRP38 domain containing A pseudogene 2","termid":"PBO:0065205"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: PBO:0029202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_micafungin","termid":"PBO:0029202"}


id: GO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Growth of a pathogenic organism that results in penetration into cells or tissues of the host organism. This often (but not necessarily) includes a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue.","definition_xrefs":["GOC:mcc","PMID:9728395"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth (obsolete GO:0001404)","synonyms":[{"name":"invasive growth","type":"exact"},{"name":"tissue invasion","type":"exact"}],"termid":"GO:0001404"}


id: FYPO:0001908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased pre-mRNA level","synonyms":[{"name":"accumulation of pre-mRNA transcripts","type":"related"},{"name":"increased pre-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased pre-mRNA transcript level","type":"exact"}],"termid":"FYPO:0001908"}


id: PR:P79063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic peptide chain release factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01942","PANTHER:PTHR10113:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic peptide chain release factor subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.01","secondary_identifiers":["UniProtKB:P79063"],"synonyms":[{"name":"Spom972h-ETF1","type":"exact"},{"name":"eRF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic release factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79063"}


id: PBO:0080057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP27X divergent transcript","termid":"PBO:0080057"}


id: PBO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 3","termid":"PBO:0045548"}


id: PBO:0030059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0030059"}


id: PR:Q92363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein FAM32A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01257","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31G5.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.21","secondary_identifiers":["UniProtKB:Q92363"],"synonyms":[{"name":"Spom972h-FAM32A","type":"exact"}],"termid":"PR:Q92363"}


id: GO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"negative regulation of second heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0072513"}


id: GO:0120314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oocyte karyosome formation, the chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["GOC:ha","GOC:krc","PMID:33382409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of oocyte karyosome formation","termid":"GO:0120313"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"oocyte karyosome formation","termid":"GO:0030717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of oocyte karyosome formation","termid":"GO:0120314"}


id: GO:0004152
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94695],"is_not":false,"summary":null,"term":"GO:0004152"},{"annotations":[94694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + A = AH(2) + orotate.","definition_xrefs":["RHEA:18073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73569","KEGG_REACTION:R01868","MetaCyc:DIHYDROOROTATE-DEHYDROGENASE-RXN"],"termid":"GO:0004152","terms_by_termid":{"GO:0004152":null,"GO:0106430":null}}


id: FYPO:0001295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal palmitoyl-CoA ligase activity","synonyms":[{"name":"normal palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001295"}


id: PBO:0040664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 10","termid":"PBO:0040664"}


id: GO:0046032
data:
  {"annotated_genes":["SJAG_04192","SJAG_05314","SJAG_00027","SJAG_04495","SJAG_02107","SJAG_06621","SJAG_04334","SJAG_03852","SJAG_03660","SJAG_02796","SJAG_03373","SJAG_00633","SJAG_00685","SJAG_03828","SJAG_00839","SJAG_02009","SJAG_02369","SJAG_02945","SJAG_00605","SJAG_02135","SJAG_03903","SJAG_06622","SJAG_00461","SJAG_01310","SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105128,105591,94465,99832,99573,105125,101636,94193,100644,91212,105127,105590,105122,105123,90722,105124,102000,101634,105593,105595,105596,105126,112534,101635,102001,105592,105594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107769,94382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72057,75101],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ADP catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP breakdown","type":"exact"},{"name":"ADP catabolism","type":"exact"},{"name":"ADP degradation","type":"exact"}],"termid":"GO:0046032","terms_by_termid":{"GO:0006096":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:0033425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"CAU codon-amino acid adaptor activity","synonyms":[{"name":"CAT codon-amino acid adaptor activity","type":"exact"},{"name":"histidine tRNA","type":"related"}],"termid":"GO:0033425"}


id: PR:O94634
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine dehydratase biosynthetic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03919","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine dehydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1677.03c","secondary_identifiers":["UniProtKB:O94634"],"synonyms":[{"name":"Spom972h-ilvA","type":"exact"},{"name":"threonine deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94634"}


id: PBO:0028797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0028797"}


id: PATO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000485 mild response (obsolete PATO:0000485)","termid":"PATO:0000485"}


id: PBO:0029618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0029618"}


id: GO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"serotonin binding","synonyms":[{"name":"5-hydroxytryptamine binding","type":"exact"}],"termid":"GO:0051378"}


id: PR:P87142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog C57A7.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.12","synonyms":[{"name":"Spom972h-ssz1","type":"exact"}],"termid":"PR:P87142"}


id: GO:1902502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a multivesicular body membrane.","definition_xrefs":["PMID:23645161","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HOPS complex","termid":"GO:0030897"},{"relation_name":"part_of","term_name":"multivesicular body membrane","termid":"GO:0032585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0005768","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"multivesicular body HOPS complex","synonyms":[{"name":"multivesicular body membrane HOPS complex","type":"exact"}],"termid":"GO:1902502"}


id: PBO:0047848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p36)","termid":"PBO:0047848"}


id: GO:1901353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:12869188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"positively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"activation of phosphatidylglycerol anabolism","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylglycerol formation","type":"narrow"},{"name":"activation of phosphatidylglycerol synthesis","type":"narrow"},{"name":"positive regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"positive regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylglycerol formation","type":"exact"},{"name":"positive regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylglycerol formation","type":"exact"},{"name":"upregulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901353"}


id: PATO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of some aspect of the bearer extending past the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extends beyond","termid":"PATO:0002464"}


id: PBO:0044448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 26, pseudogene","termid":"PBO:0044448"}


id: PBO:0072265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 3","termid":"PBO:0072265"}


id: PBO:0078981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 1-1","termid":"PBO:0078981"}


id: PBO:0041233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 56","termid":"PBO:0041233"}


id: GO:0034851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + CoASH = pivalyl-CoA + propanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2,4,4-trimethyl-3-oxopentanoyl-CoA 2-C-propanoyl transferase activity","termid":"GO:0034851"}


id: GO:0045347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class II biosynthetic process","termid":"GO:0045346"},{"relation_name":"negatively_regulates","term_name":"MHC class II biosynthetic process","termid":"GO:0045342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class II biosynthetic process","synonyms":[{"name":"down regulation of MHC class II biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class II biosynthetic process","type":"exact"},{"name":"downregulation of MHC class II biosynthetic process","type":"exact"},{"name":"inhibition of MHC class II biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class II anabolism","type":"exact"},{"name":"negative regulation of MHC class II biosynthesis","type":"exact"},{"name":"negative regulation of MHC class II formation","type":"exact"},{"name":"negative regulation of MHC class II synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045347"}


id: PBO:0036331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human COQ9","termid":"PBO:0036331"}


id: GO:0021855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cell into the hypothalamus region of the forebrain.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hypothalamus development","termid":"GO:0021854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus cell migration","termid":"GO:0021855"}


id: PBO:0079796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A3 pseudogene 7","termid":"PBO:0079796"}


id: PBO:0074883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62A","termid":"PBO:0074883"}


id: GO:0140483
data:
  {"annotated_genes":["SJAG_00794","SJAG_04076","SJAG_03217","SJAG_04884","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91513,98624,101660,106109,109985],"is_not":false,"summary":null,"term":"GO:0140483"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings the kinetochore and another molecule into contact, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_03217":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"kinetochore adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inner kinetochore adaptor activity","type":"narrow"},{"name":"outer kinetochore adaptor activity","type":"narrow"}],"termid":"GO:0140483","terms_by_termid":{"GO:0140483":null}}


id: PBO:0058219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4509-3","termid":"PBO:0058219"}


id: PBO:0053712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 921","termid":"PBO:0053712"}


id: PBO:0043177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold inducible RNA binding protein","termid":"PBO:0043177"}


id: FYECO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol and ethanol as the carbon sources, yeast extract and other components.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol and ethanol rich medium","synonyms":[{"name":"YCEG","type":"narrow"},{"name":"YEGES","type":"narrow"},{"name":"glycerol + ethanol YE","type":"related"},{"name":"glycerol and ethanol YE","type":"related"},{"name":"non-fermentable glycerol and ethanol rich medium","type":"exact"},{"name":"nonfermentable glycerol and ethanol rich medium","type":"exact"}],"termid":"FYECO:0000139"}


id: GO:0016621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamaldehyde + CoA + NADP+ = cinnamoyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.2.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cinnamoyl-CoA reductase activity","secondary_identifiers":["MetaCyc:CINNAMOYL-COA-REDUCTASE-RXN","RHEA:10620"],"synonyms":[{"name":"cinnamaldehyde:NADP+ oxidoreductase (CoA-cinnamoylating)","type":"related"},{"name":"cinnamoyl CoA reductase activity","type":"exact"},{"name":"cinnamoyl-CoA:NADPH reductase activity","type":"related"},{"name":"cinnamoyl-coenzyme A reductase activity","type":"related"},{"name":"feruloyl coenzyme A reductase activity","type":"related"},{"name":"feruloyl-CoA reductase activity","type":"related"},{"name":"ferulyl-CoA reductase activity","type":"related"},{"name":"p-hydroxycinnamoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0016621"}


id: PBO:0061674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62","termid":"PBO:0061674"}


id: PBO:0091991
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Papulacandin B Resistance","termid":"PBO:0091991"}


id: PBO:0052947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte associated protein 3","termid":"PBO:0052947"}


id: PBO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 8, CSA ubiquitin ligase complex subunit","termid":"PBO:0046485"}


id: PBO:0027263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_multiseptate_cell","termid":"PBO:0027263"}


id: GO:1990017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a tanycyte that lies within the ependyma and contains the nucleus. A tanycyte is a specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS.","definition_xrefs":["NIF_Subcellular:sao401910342","ISBN:0195065719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatic portion of tanycyte","synonyms":[{"name":"somatic portion","type":"broad"}],"termid":"GO:1990017"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: GO:0071505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycophenolic acid stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mycophenolic acid","synonyms":[{"name":"response to mycophenolate","type":"exact"}],"termid":"GO:0071505"}


id: MOD:01571
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01571"}


id: PBO:0073188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein S","termid":"PBO:0073188"}


id: GO:1902010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:10882126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"down regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"down regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"down regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of protein biosynthetic process involved in ER stress response","type":"narrow"},{"name":"inhibition of protein biosynthetic process involved in response to ER stress","type":"narrow"},{"name":"inhibition of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of protein anabolism involved in ER stress response","type":"exact"},{"name":"negative regulation of protein anabolism involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein anabolism involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in ER stress response","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein formation involved in ER stress response","type":"exact"},{"name":"negative regulation of protein formation involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein formation involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein synthesis involved in ER stress response","type":"exact"},{"name":"negative regulation of protein synthesis involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein synthesis involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of translation involved in ER stress response","type":"exact"},{"name":"negative regulation of translation involved in response to ER stress","type":"exact"},{"name":"protein biosynthesis inhibitor activity involved in ER stress response","type":"related"},{"name":"protein biosynthesis inhibitor activity involved in response to ER stress","type":"related"},{"name":"protein biosynthesis inhibitor activity involved in response to endoplasmic reticulum stress","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in ER stress response","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in response to ER stress","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in response to endoplasmic reticulum stress","type":"related"}],"termid":"GO:1902010"}


id: PBO:0063205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 1","termid":"PBO:0063205"}


id: PR:000085732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Ser-11, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Phos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Ser-11, MOD:00046","type":"related"},{"name":"Spom-hht1/InitMet-/Phos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Ser-11, MOD:00046","type":"related"},{"name":"hht1/Phos(S10)","type":"exact"}],"termid":"PR:000085732"}


id: GO:0032624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-20 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-20 production","secondary_identifiers":["GO:0072618","GO:0042237"],"synonyms":[{"name":"IL-20 production","type":"exact"},{"name":"ZCYTO10 production","type":"exact"},{"name":"interleukin-20 biosynthetic process","type":"narrow"},{"name":"interleukin-20 secretion","type":"narrow"}],"termid":"GO:0032624"}


id: GO:0007186
data:
  {"annotated_genes":["SJAG_02311","SJAG_01345","SJAG_02233","SJAG_04312","SJAG_01699","SJAG_01978","SJAG_02444","SJAG_01254","SJAG_04026","SJAG_01754","SJAG_01245","SJAG_00266","SJAG_02426","SJAG_00574","SJAG_03081","SJAG_02481","SJAG_02027","SJAG_00472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84392,93244,103320,106211],"is_not":false,"summary":null,"term":"GO:0007186"},{"annotations":[96618,98029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007189"},{"annotations":[90426,105210,105722,111702,102081,112744,102673,103029,98030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[112565],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106072"},{"annotations":[88955,88291,96620,112566,104160],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to its receptor, in which the activated receptor promotes the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, and ends with regulation of a downstream cellular process. The pathway can start from the plasma membrane, Golgi or nuclear membrane.","definition_xrefs":["PMID:16902576","GOC:mah","PMID:24568158","GOC:bf","Wikipedia:G_protein-coupled_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01345":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01978":null,"SJAG_02027":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0038042"],"synonyms":[{"name":"G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"G-protein coupled receptor signaling pathway via GPCR dimer","type":"narrow"},{"name":"G-protein coupled receptor signalling pathway","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"GPCR signaling pathway","type":"exact"},{"name":"GPCR signalling pathway","type":"exact"},{"name":"dimeric G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"dimeric G-protein coupled receptor signalling pathway","type":"narrow"}],"termid":"GO:0007186","terms_by_termid":{"GO:0007186":null,"GO:0007189":null,"GO:0010619":null,"GO:0106072":null,"GO:0110034":null}}


id: SO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon that has been redefined at translation. The redefinition may be as a result of translational bypass, translational frameshifting or stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_codon","synonyms":[{"name":"recoded codon","type":"exact"}],"termid":"SO:0000145"}


id: GO:0043833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [methyl-Co(III) methylamine-specific corrinoid protein] + coenzyme M = [Co(I) methylamine-specific corrinoid protein] + H+ + methyl-coenzyme M. This reaction is the transfer of the methyl group from the methylated corrinoid cofactor of a methylamine corrinoid protein to coenzyme M.","definition_xrefs":["RHEA:18773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"[methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8103","MetaCyc:RXN-8099","MetaCyc:RXN-8101","EC:2.1.1.247"],"synonyms":[{"name":"MT2-A","type":"broad"},{"name":"methylamine-specific methylcobalamin:CoM methyltransferase activity","type":"exact"},{"name":"methylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"exact"},{"name":"methylcobamide:CoM methyltransferase activity","type":"broad"},{"name":"methylcobamide:coenzyme M methyltransferase activity","type":"broad"},{"name":"monomethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"}],"termid":"GO:0043833"}


id: PBO:0011475
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of soluble starch to glucose is 8.9 (mM min-1 ml-2)","termid":"PBO:0011475"}


id: GO:0010980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of vitamin D 24-hydroxylase activity. Vitamin D 24-hydroxylase activity catalyzes the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D 24-hydroxylase activity","termid":"GO:0010979"},{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitamin D 24-hydroxylase activity","termid":"GO:0010980"}


id: GO:0043885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + oxidized ferredoxin = CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carbon-monoxide dehydrogenase (ferredoxin) activity","secondary_identifiers":["MetaCyc:1.2.7.4-RXN"],"synonyms":[{"name":"CO dehydrogenase activity","type":"exact"},{"name":"CO-dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"CO-dehydrogenase activity","type":"exact"},{"name":"CODH","type":"related"},{"name":"carbon monoxide dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"carbon monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide,water:ferredoxin oxidoreductase activity","type":"exact"},{"name":"carbon-monoxide:(acceptor) oxidoreductase activity","type":"exact"}],"termid":"GO:0043885"}


id: PBO:0046026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit gamma","termid":"PBO:0046026"}


id: PBO:0074693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70C","termid":"PBO:0074693"}


id: PBO:0052997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 2","termid":"PBO:0052997"}


id: SO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcriptional_cis_regulatory_region that restricts the activity of a CRM to a single promoter and which functions only when both itself and an insulator are located between the CRM and the promoter.","definition_xrefs":["SO:regcreative"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001058 promoter_targeting_sequence (obsolete SO:0001058)","synonyms":[{"name":"promoter targeting sequence","type":"exact"}],"termid":"SO:0001058"}


id: GO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:14581484","ISBN:0781735149","PMID:12851652","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell activation","termid":"GO:0042118"}


id: PBO:0005677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C Ptc2","termid":"PBO:0005677"}


id: PBO:0065634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 3","termid":"PBO:0065634"}


id: GO:0034656
data:
  {"annotated_genes":["SJAG_04927","SJAG_00957","SJAG_02580","SJAG_02959","SJAG_01359","SJAG_01673","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83835,83834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[85429,104570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[86877,108368,87285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound catabolic process","termid":"GO:0034655"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_03771":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleobase-containing small molecule catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside and nucleotide breakdown","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide catabolism","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide degradation","type":"exact"}],"termid":"GO:0034656","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0009972":null,"GO:0046135":null}}


id: GO:0015631
data:
  {"annotated_genes":["SJAG_02848","SJAG_01613","SJAG_02384","SJAG_04074","SJAG_01760","SJAG_00851","SJAG_00930","SJAG_04745","SJAG_02336","SJAG_02270","SJAG_04841","SJAG_02656","SJAG_02609","SJAG_02045","SJAG_02040","SJAG_03073","SJAG_03835","SJAG_02624","SJAG_00332","SJAG_00723","SJAG_01297","SJAG_00773","SJAG_03540","SJAG_00042","SJAG_01546","SJAG_02795","SJAG_02814"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75778,66212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048487"},{"annotations":[61065,63456,75321,75040,58572,61830,78741,73165,67532,68133,75501,76152,59038,75838,72841,75765,63411,65737,77908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008017"},{"annotations":[70841,70265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[67645,69593,78881,64771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of tubulin, including microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02270":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04074":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"tubulin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015631","terms_by_termid":{"GO:0008017":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null}}


id: PBO:0056685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 9","termid":"PBO:0056685"}


id: PBO:0078408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 2-2","termid":"PBO:0078408"}


id: PBO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible gene merge, unusual domain combination","termid":"PBO:0002450"}


id: PBO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tert-butyl_hydroperoxide","termid":"PBO:0030378"}


id: PBO:0068883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 123, pseudogene","termid":"PBO:0068883"}


id: GO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UDP + dolichyl N-acetyl-alpha-D-glucosaminyl phosphate.","definition_xrefs":["EC:2.4.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate alpha-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:14693","GO:0004101","MetaCyc:2.4.1.153-RXN"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:dolichyl-phosphate alpha-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-dolichol phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl phosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl-phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl-phosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichol phosphate acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0004166"}


id: PBO:0083370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF ALG3","termid":"PBO:0083370"}


id: GO:0070230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte apoptotic process","synonyms":[{"name":"activation of lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of lymphocyte apoptosis","type":"narrow"},{"name":"stimulation of lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of lymphocyte apoptosis","type":"exact"},{"name":"up-regulation of lymphocyte apoptosis","type":"exact"},{"name":"upregulation of lymphocyte apoptosis","type":"exact"}],"termid":"GO:0070230"}


id: PBO:0051189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-7 (pseudogene)","termid":"PBO:0051189"}


id: PBO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk6 (predicted)","termid":"PBO:0001720"}


id: PBO:0072057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 27","termid":"PBO:0072057"}


id: PBO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor","termid":"PBO:0061130"}


id: FYPO:0007344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere during vegetative growth","termid":"FYPO:0000451"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at the centromere central core during vegetative growth","synonyms":[{"name":"increased protein localisation to centromere central core during vegetative growth","type":"exact"},{"name":"increased protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, centric central core","type":"exact"},{"name":"increased protein localization to chromosome, centromeric central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007344"}


id: PBO:0080360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 15 pseudogene","termid":"PBO:0080360"}


id: PBO:0049675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase","termid":"PBO:0049675"}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: PBO:0074177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 4","termid":"PBO:0074177"}


id: FYECO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any set of experimental conditions that places all cells in a culture into the same growth stage (e.g. cell cycle phase).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous culture","termid":"FYECO:0000346"}


id: PBO:0056017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 pseudogene 1","termid":"PBO:0056017"}


id: PBO:0042134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholecystokinin","termid":"PBO:0042134"}


id: GO:0031166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the vacuolar membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of vacuolar membrane (obsolete GO:0031166)","synonyms":[{"name":"integral to vacuolar membrane","type":"narrow"}],"termid":"GO:0031166"}


id: MOD:01994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N1'-formyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-tryptophan","termid":"MOD:01106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N1'-formyl-L-tryptophan","synonyms":[{"name":"N1'FoTrp","type":"exact"}],"termid":"MOD:01994"}


id: GO:1990375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the baculum over time, from its formation to the mature structure.","definition_xrefs":["PMID:21471296","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baculum development","synonyms":[{"name":"os penis development","type":"exact"},{"name":"penile bone development","type":"exact"},{"name":"penis bone development","type":"exact"}],"termid":"GO:1990375"}


id: GO:0043845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcomplex of DNA polymerase III composed of the epsilon subunit which has proofreading activity, and the theta subunit which enhances the epsilon subunit's proofreading activity.","definition_xrefs":["PMID:16973612","Wikipedia:Pol_III"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III, core complex","termid":"GO:0044776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, proofreading complex","synonyms":[{"name":"DNA polymerase III, proof-reading complex","type":"exact"},{"name":"DNA polymerase III, proof-reading subcomplex","type":"exact"},{"name":"DNA polymerase III, proofreading subcomplex","type":"exact"}],"termid":"GO:0043845"}


id: PBO:0080990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 21","termid":"PBO:0080990"}


id: GO:0048476
data:
  {"annotated_genes":["SJAG_00623","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97700,113261],"is_not":false,"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"An endodeoxyribonuclease complex that resolves the 4-way DNA intermediates of a Holliday junction into two separate duplex DNA molecules. Can be branch-migration associated.","definition_xrefs":["PMID:11207366","PMID:12374758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Holliday junction resolvase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme1 holliday resolvase complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"},{"name":"Mus81-Eme2 holliday resolvase complex","type":"narrow"},{"name":"resolvasome","type":"exact"}],"termid":"GO:0048476","terms_by_termid":{"GO:0048476":null}}


id: PBO:0042289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 cytoplasmic tail binding protein 2","termid":"PBO:0042289"}


id: PBO:0079463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog C","termid":"PBO:0079463"}


id: GO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD(P)+ + CDP-4-dehydro-3,6-dideoxy-D-glucose = NAD(P)H + CDP-4-dehydro-6-deoxy-D-glucose.","definition_xrefs":["EC:1.17.1.1","MetaCyc:1.17.1.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"CDP-4-dehydro-6-deoxyglucose reductase activity","synonyms":[{"name":"CDP-4-dehydro-3,6-dideoxy-D-glucose:NAD(P)+ 3-oxidoreductase activity","type":"related"},{"name":"CDP-4-keto-6-deoxy-D-glucose-3-dehydrogenase system activity","type":"related"},{"name":"CDP-4-keto-6-deoxyglucose reductase activity","type":"related"},{"name":"CDP-4-keto-deoxy-glucose reductase activity","type":"related"},{"name":"NAD(P)H:CDP-4-keto-6-deoxy-D-glucose oxidoreductase activity","type":"related"},{"name":"cytidine diphosphate 4-keto-6-deoxy-D-glucose-3-dehydrogenase activity","type":"related"},{"name":"cytidine diphospho-4-keto-6-deoxy-D-glucose reductase activity","type":"related"}],"termid":"GO:0047099"}


id: GO:1900604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tensidol A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"tensidol A metabolic process","termid":"GO:1900603"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tensidol A catabolic process","synonyms":[{"name":"tensidol A breakdown","type":"exact"},{"name":"tensidol A catabolism","type":"exact"},{"name":"tensidol A degradation","type":"exact"}],"termid":"GO:1900604"}


id: GO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of the innate immune response that takes place in the mucosal tissues.","definition_xrefs":["PMID:15971105","GOC:add","PMID:10719665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal immune response","termid":"GO:0002385"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immune response in mucosa","termid":"GO:0002227"}


id: GO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal movement of mRNA from the nucleus to the cytoplasm of the host cell, leading to shutoff of host protein expression. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:sp","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host gene expression","termid":"GO:0039657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA export from nucleus","secondary_identifiers":["VZ:902"],"synonyms":[{"name":"inhibition by virus of host mRNA nuclear export","type":"narrow"},{"name":"inhibition of host mRNA nuclear export by virus","type":"narrow"},{"name":"negative regulation by virus of host mRNA nuclear export","type":"broad"},{"name":"suppression by virus of host mRNA export from nucleus","type":"narrow"},{"name":"suppression of host mRNA nuclear export by virus","type":"narrow"}],"termid":"GO:0039522"}


id: PBO:0085770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase with similarity to mammalian PDK1 and yeast Pkh1p/Phk2p; yeast Pkh1p and Pkh2p are two redundant upstream activators of Pkc1p; identified as a multicopy suppressor of a pkh1 pkh2 double mutant","termid":"PBO:0085770"}


id: PBO:0046702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 2","termid":"PBO:0046702"}


id: GO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription initiation","termid":"GO:2000143"},{"relation_name":"negatively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription initiation by RNA polymerase II","synonyms":[{"name":"negative regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060633"}


id: GO:0071036
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88451,109460],"is_not":false,"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nucleolar RNA (snoRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snoRNA.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:15935758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA catabolic process","termid":"GO:0016077"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0044248","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snoRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent snoRNA catabolic process","type":"related"}],"termid":"GO:0071036","terms_by_termid":{"GO:0071036":null}}


id: PBO:0041287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 12","termid":"PBO:0041287"}


id: GO:0003168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a Purkinje myocyte (also known as cardiac Purkinje fiber cell). These cells are specialized cardiomyocytes that receive signals from the bundle of His and innervate the ventricular cardiac muscle.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"Purkinje myocyte development","termid":"GO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte differentiation","synonyms":[{"name":"cardiac Purkinje fiber cell differentiation","type":"exact"}],"termid":"GO:0003168"}


id: PBO:0090277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exonuclease, C-terminal domain superfamily","termid":"PBO:0090277"}


id: PR:O60157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C7.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine-synthesizing protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.08c","synonyms":[{"name":"Spom972h-SPBC19C7.08c","type":"exact"},{"name":"leucine carboxyl methyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(Phe) (7-(3-amino-3-(methoxycarbonyl)propyl)wyosine(37)-N)-methoxycarbonyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-yW synthesizing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60157"}


id: PBO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug115","termid":"PBO:0016909"}


id: GO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + poly[(R)-3-hydroxybutanoate](n) = poly[(R)-3-hydroxybutanoate](x) + poly[(R)-3-hydroxybutanoate](n-x); x is 1-5.","definition_xrefs":["MetaCyc:3.1.1.75-RXN","EC:3.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"poly(3-hydroxybutyrate) depolymerase activity","secondary_identifiers":["RHEA:11248"],"synonyms":[{"name":"PHB depolymerase activity","type":"related"},{"name":"poly((R)-hydroxyalkanoic acid) depolymerase activity","type":"broad"},{"name":"poly(3HB) depolymerase activity","type":"related"},{"name":"poly(HA(SCL)) depolymerase activity","type":"related"},{"name":"poly(HA) depolymerase activity","type":"related"},{"name":"poly(HASCL) depolymerase activity","type":"related"},{"name":"poly[(R)-3-hydroxybutyrate] hydrolase activity","type":"related"},{"name":"poly[(R)-hydroxyalkanoic acid] depolymerase","type":"broad"}],"termid":"GO:0050526"}


id: GO:1900198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of penicillin metabolic process","termid":"GO:0033246"},{"relation_name":"is_a","term_name":"regulation of penicillin biosynthetic process","termid":"GO:1900196"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of penicillin biosynthetic process","synonyms":[{"name":"activation of penicillin anabolism","type":"exact"},{"name":"activation of penicillin biosynthesis","type":"exact"},{"name":"activation of penicillin biosynthetic process","type":"narrow"},{"name":"activation of penicillin formation","type":"exact"},{"name":"activation of penicillin synthesis","type":"exact"},{"name":"positive regulation of penicillin anabolism","type":"exact"},{"name":"positive regulation of penicillin biosynthesis","type":"exact"},{"name":"positive regulation of penicillin formation","type":"exact"},{"name":"positive regulation of penicillin synthesis","type":"exact"},{"name":"up regulation of penicillin anabolism","type":"exact"},{"name":"up regulation of penicillin biosynthesis","type":"exact"},{"name":"up regulation of penicillin biosynthetic process","type":"exact"},{"name":"up regulation of penicillin formation","type":"exact"},{"name":"up regulation of penicillin synthesis","type":"exact"},{"name":"up-regulation of penicillin anabolism","type":"exact"},{"name":"up-regulation of penicillin biosynthesis","type":"exact"},{"name":"up-regulation of penicillin biosynthetic process","type":"exact"},{"name":"up-regulation of penicillin formation","type":"exact"},{"name":"up-regulation of penicillin synthesis","type":"exact"},{"name":"upregulation of penicillin anabolism","type":"exact"},{"name":"upregulation of penicillin biosynthesis","type":"exact"},{"name":"upregulation of penicillin biosynthetic process","type":"exact"},{"name":"upregulation of penicillin formation","type":"exact"},{"name":"upregulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900198"}


id: PBO:0034192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_xenology_relationship_with","termid":"PBO:0034192"}


id: FYPO:0000413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which plasma membrane fusion involved in cytogamy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell fusion during mating","termid":"FYPO:0000412"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"abolished cell fusion during mating","synonyms":[{"name":"abolished cell fusion during conjugation","type":"exact"},{"name":"abolished plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"absent cell fusion during mating","type":"exact"},{"name":"cell fusion abolished during mating","type":"exact"},{"name":"cell fusion: absent","type":"related"}],"termid":"FYPO:0000413"}


id: PBO:0055331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2759","termid":"PBO:0055331"}


id: PBO:0073347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8 pseudogene 1","termid":"PBO:0073347"}


id: PBO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer=","termid":"PBO:0018033"}


id: PBO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi phosphoprotein 3","termid":"PBO:0048931"}


id: FYPO:0006787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}


id: PBO:0050835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet amyloid polypeptide","termid":"PBO:0050835"}


id: GO:1990499
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex required for the asymmetric division of neuroblasts in Drosophila. Coordinates asymmetric localization of cell fate determinants with orientation of the mitotic spindle resulting in different daughter cells upon division. Localizes at the apical cortex of the neuroblast: Raps maintains, but does not initiate, Insc apically, while Insc segregates Raps asymmetrically. Complex appears to be conserved in mammals (composed of INSC and GPSM1 or GPSM2).","definition_xrefs":["GOC:bhm","PMID:22171003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"apical cortex","termid":"GO:0045179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"raps-insc complex","synonyms":[{"name":"Rapsynoid-Inscuteable complex","type":"exact"},{"name":"partner of inscuteable-inscuteable complex","type":"exact"}],"termid":"GO:1990499"}


id: GO:1904674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell population maintenance","termid":"GO:1902459"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"positively_regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell population maintenance","synonyms":[{"name":"activation of somatic stem cell population maintenance","type":"narrow"},{"name":"up regulation of somatic stem cell population maintenance","type":"exact"},{"name":"up-regulation of somatic stem cell population maintenance","type":"exact"},{"name":"upregulation of somatic stem cell population maintenance","type":"exact"}],"termid":"GO:1904674"}


id: FYPO:0000893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3K9 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000893"}


id: FYPO:0003908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of genes that are expressed in response to stress measured in a cell is greater than normal. All stress-responsive genes, or a specific subset of such genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased stress response gene antisense RNA level","synonyms":[{"name":"increased antisense RNA level at stress response genes","type":"related"},{"name":"increased level of stress response gene antisense transcripts","type":"exact"},{"name":"increased stress response gene antisense RNA accumulation","type":"related"},{"name":"increased stress response gene antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased stress response gene antisense RNA level during vegetative growth","type":"exact"},{"name":"increased stress response gene antisense transcript level","type":"exact"}],"termid":"FYPO:0003908"}


id: PBO:0017056
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ars Binding Protein","termid":"PBO:0017056"}


id: FYPO:0003121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:24173580","PomBase:mah","PMID:22582262","PMID:23117617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal rate of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal rate of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal rate of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003121"}


id: GO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002587"}


id: PBO:0086522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps the dubious gene YOR072W-A; diploid deletion strains are methotrexate, paraquat and wortmannin sensitive","termid":"PBO:0086522"}


id: GO:0060465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a pharynx from an initial condition to its mature state. The pharynx is the part of the digestive system immediately posterior to the mouth.","definition_xrefs":["GOC:dph","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pharynx development","synonyms":[{"name":"pharyngeal development","type":"related"}],"termid":"GO:0060465"}


id: PBO:0078978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 4-3","termid":"PBO:0078978"}


id: PATO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being uninterrupted in time, sequence, substance, or extent.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"continuous","secondary_identifiers":["PATO:0000429"],"synonyms":[{"name":"uninterrupted","type":"exact"}],"termid":"PATO:0000689"}


id: PBO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P (predicted)","termid":"PBO:0000184"}


id: GO:0034926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrene-4,5-oxide + H2O = trans-4,5-dihydroxy-4,5-dihydropyrene.","definition_xrefs":["UM-BBD_reactionID:r0942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyrene-4,5-epoxide hydrolase activity","termid":"GO:0034926"}


id: GO:0051399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an arginine residue from the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["GOC:ai","PMID:12799365"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal arginine aminopeptidase activity (obsolete GO:0051399)","synonyms":[{"name":"N-terminal arginine aminopeptidase activity","type":"exact"},{"name":"arginine aminopeptidase activity","type":"broad"},{"name":"argininyl aminopeptidase activity","type":"broad"}],"termid":"GO:0051399"}


id: PBO:0044540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DXZ4 associated non-coding transcript 1, proximal","termid":"PBO:0044540"}


id: GO:0001025
data:
  {"annotated_genes":["SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase III transcription factor, a protein required to initiate or regulate transcription by RNA polymerase III.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase III general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase III transcription factor binding","type":"broad"}],"termid":"GO:0001025","terms_by_termid":{"GO:0001156":null}}


id: PBO:0082560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide synthase component; involved in synthesis of ceramide from C26(acyl)-coenzyme A and dihydrosphingosine or phytosphingosine, functionally equivalent to Lag1p; LAC1 has a paralog, LAG1, that arose from the whole genome duplication","termid":"PBO:0082560"}


id: PR:O13963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphosphomevalonate decarboxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10977:SF2","OMA:SCHPO01270","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.03","secondary_identifiers":["UniProtKB:O13963"],"synonyms":[{"name":"MDDase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVD","type":"exact"},{"name":"mevalonate pyrophosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mevalonate-5-diphosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13963"}


id: PBO:0045427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 7","termid":"PBO:0045427"}


id: GO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA.","definition_xrefs":["EC:4.1.3.4","RHEA:24404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA lyase activity","secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN","KEGG_REACTION:R01360","Reactome:R-HSA-6788597","Reactome:R-HSA-74180"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutarate-CoA lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA cleaving enzyme","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase activity","type":"related"},{"name":"HMG-CoA lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-cleaving enzyme","type":"related"}],"termid":"GO:0004419"}


id: PBO:0027296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell","termid":"PBO:0027296"}


id: GO:2001072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to galactomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteropolysaccharide binding","termid":"GO:0010297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galactomannan binding","termid":"GO:2001072"}


