# terms

id: PBO:0050722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 8","termid":"PBO:0050722"}


id: GO:0033624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"negatively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of integrin activation","synonyms":[{"name":"negative regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033624"}


id: PATO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity when it possesses at least one ring that is aromatic, i.e. A conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromaticity","termid":"PATO:0002190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic","termid":"PATO:0002191"}


id: PBO:0046326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 4","termid":"PBO:0046326"}


id: PBO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B-K119_ubiquitination_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035791"}


id: GO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ergosterol = UDP + O-glucosyl-ergosterol.","definition_xrefs":["RHEA:61836","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 3-beta-glucosyltransferase activity","termid":"GO:0016906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ergosterol UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-16975"],"termid":"GO:0051506"}


id: PBO:0089691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2","termid":"PBO:0089691"}


id: GO:0032678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-9 production","secondary_identifiers":["GO:0045417"],"synonyms":[{"name":"regulation of IL-9 production","type":"exact"},{"name":"regulation of interleukin-9 biosynthetic process","type":"narrow"}],"termid":"GO:0032678"}


id: GO:2000980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear receptor cell differentiation","synonyms":[{"name":"regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000980"}


id: _global:has_positive_regulatory_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"_global:has_regulatory_component_activity"},{"relation_name":"is_a","term_name":"positively_regulated_by","termid":"_global:positively_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_positive_regulatory_component_activity","secondary_identifiers":["RO:0002015"],"termid":"_global:has_positive_regulatory_component_activity"}


id: PATO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrophilicity","termid":"PATO:0001886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilic","termid":"PATO:0001887"}


id: GO:1904133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in rhombomere morphogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in rhombomere morphogenesis","termid":"GO:1904125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in rhombomere morphogenesis","termid":"GO:1904133"}


id: GO:0046433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-aminoethylphosphonate, most abundant and ubiquitous of naturally occurring phosphonates. It is typically found as a conjugate of glycans, lipids, and proteins, which in turn perform essential biochemical functions in specialized lower organisms.","definition_xrefs":["GOC:ai","PMID:12107130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate metabolic process","synonyms":[{"name":"2-aminoethylphosphonate metabolism","type":"exact"},{"name":"2-phosphonoethylamine metabolic process","type":"exact"},{"name":"2-phosphonoethylamine metabolism","type":"exact"},{"name":"ciliatine metabolic process","type":"exact"},{"name":"ciliatine metabolism","type":"exact"}],"termid":"GO:0046433"}


id: PBO:0050705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 2","termid":"PBO:0050705"}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: PBO:0065103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2A antisense RNA 1","termid":"PBO:0065103"}


id: GO:0020038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mechanically stable cytoskeletal structure associated with the cytoplasmic face of the pellicle and surrounding the microtubule-based cytoskeleton.","definition_xrefs":["PMID:11420112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"subpellicular network","termid":"GO:0020038"}


id: PBO:0080928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 6","termid":"PBO:0080928"}


id: FYPO:0005643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased, and an increased amount of the protein is instead detected in the nucleus and at the spindle pole body.","definition_xrefs":["PomBase:mah","PMID:24478458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","synonyms":[{"name":"decreased protein localisation to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell end, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and SPB","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"}],"termid":"FYPO:0005643"}


id: PBO:0045530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2 pseudogene 1","termid":"PBO:0045530"}


id: PBO:0049686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine ammonia-lyase","termid":"PBO:0049686"}


id: GO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sorbose(out) = protein histidine + sorbose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["PMID:10613875","GOC:mtg_transport","RHEA:49296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"sorbose transmembrane transporter activity","termid":"GO:0019194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sorbose phosphotransferase system transporter activity","secondary_identifiers":["MetaCyc:RXN-15094","EC:2.7.1.206"],"synonyms":[{"name":"sorbose PTS transporter activity","type":"exact"}],"termid":"GO:0022871"}


id: GO:0034727
data:
  {"annotated_genes":["SJAG_05017","SJAG_00355","SJAG_03851","SJAG_04232","SJAG_03718","SJAG_04655","SJAG_06309","SJAG_04502","SJAG_01135","SJAG_00645","SJAG_03100","SJAG_01274","SJAG_01382","SJAG_01722","SJAG_02100","SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71714,84089,86313,87819,90128,90445,94074,95877,96156,99779,101012,104400,104848,107885,112405,113964],"is_not":false,"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"Degradation of a cell nucleus by microautophagy.","definition_xrefs":["PMID:18701704","GOC:autophagy","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"},{"relation_name":"is_a","term_name":"nucleophagy","termid":"GO:0044804"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01722":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"piecemeal microautophagy of the nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PMN","type":"exact"}],"termid":"GO:0034727","terms_by_termid":{"GO:0034727":null}}


id: PBO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.4","termid":"PBO:0000585"}


id: PBO:0078913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 3-2","termid":"PBO:0078913"}


id: PBO:0086695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; intron is predicted but not detected experimentally; YLR464W overlaps the verified gene YRF1-4/YLR466W and two dubious ORFs YLR463C and YLR465C","termid":"PBO:0086695"}


id: GO:0060517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication of epithelial cells, contributing to the expansion of the primary prostatic bud.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"},{"relation_name":"part_of","term_name":"primary prostatic bud elongation","termid":"GO:0060516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in prostatic bud elongation","termid":"GO:0060517"}


id: GO:2001061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a D-glycero-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"D-glycero-D-manno-heptose 7-phosphate metabolic process","termid":"GO:2001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-glycero-D-manno-heptose 7-phosphate biosynthetic process","secondary_identifiers":["UniPathway:UPA00041"],"synonyms":[{"name":"D-glycero-D-manno-heptose 7-phosphate biosynthesis","type":"exact"}],"termid":"GO:2001061"}


id: PBO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor Sak1","termid":"PBO:0001906"}


id: GO:1990591
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98986,106220],"is_not":false,"summary":null,"term":"GO:1990591"}]},"cv_name":"biological_process","definition":"The directed movement of asparagine into the vacuole across the vacuolar membrane.","definition_xrefs":["PMID:20388511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"},{"relation_name":"is_a","term_name":"asparagine transmembrane transport","termid":"GO:1903713"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"asparagine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990591","terms_by_termid":{"GO:1990591":null}}


id: GO:0071055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM9.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM9 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM9 complex","type":"narrow"}],"termid":"GO:0071055"}


id: PBO:0076567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3H","termid":"PBO:0076567"}


id: PBO:0061142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 5","termid":"PBO:0061142"}


id: PBO:0084944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in spore wall assembly; sequence similarity to DTR1 and QDR3, and the triple mutant dtr1 qdr1 qdr3 exhibits reduced dityrosine fluorescence relative to the single mutants; required for resistance to quinidine, ketoconazole, fluconazole, and barban; QDR1 has a paralog, AQR1, that arose from the whole genome duplication","termid":"PBO:0084944"}


id: PBO:0082602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin light chain; subunit of the major coat protein involved in intracellular protein transport and endocytosis; regulates endocytic progression; thought to regulate clathrin function; the clathrin triskelion is a trimeric molecule composed of three heavy chains that radiate from a vertex and three light chains which bind noncovalently near the vertex of the triskelion","termid":"PBO:0082602"}


id: GO:1905022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of threonine-tRNA ligase activity.","definition_xrefs":["PMID:8049265","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of threonine-tRNA ligase activity (obsolete GO:1905022)","synonyms":[{"name":"down regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"down regulation of TRS","type":"related"},{"name":"down regulation of threonine translase activity","type":"exact"},{"name":"down regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"down regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"down regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"down-regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of TRS","type":"related"},{"name":"down-regulation of threonine translase activity","type":"exact"},{"name":"down-regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"downregulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"downregulation of TRS","type":"related"},{"name":"downregulation of threonine translase activity","type":"exact"},{"name":"downregulation of threonine-tRNA ligase activity","type":"exact"},{"name":"downregulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"downregulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"inhibition of L-threonine:tRNAThr ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of TRS","type":"related"},{"name":"inhibition of threonine translase activity","type":"narrow"},{"name":"inhibition of threonine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of threonine-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of threonyl ribonucleic synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of threonyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"negative regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of TRS","type":"related"},{"name":"negative regulation of threonine translase activity","type":"exact"},{"name":"negative regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905022"}


id: PBO:0085348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase C; hydrolyzes phosphatidylinositol 4,5-biphosphate (PIP2) to generate the signaling molecules inositol 1,4,5-triphosphate (IP3) and 1,2-diacylglycerol (DAG); involved in regulating many cellular processes; Plc1p and inositol polyphosphates are required for acetyl-CoA homeostasis which regulates global histone acetylation","termid":"PBO:0085348"}


id: PR:O74733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10644:SF2","PRO:DNx","OMA:SCHPO02722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.08","secondary_identifiers":["UniProtKB:O74733"],"synonyms":[{"name":"Spom972h-CPSF1","type":"exact"},{"name":"cleavage factor two protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74733"}


id: GO:0033328
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86650],"is_not":false,"summary":null,"term":"GO:0033328"}]},"cv_name":"molecular_function","definition":"Binding to a peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane.","definition_xrefs":["GOC:rb","PMID:15133130","PMID:17020786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"peroxisome membrane targeting sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PMP targeting signal (mPTS) binding","type":"exact"},{"name":"PMP targeting signal binding","type":"exact"},{"name":"mPTS binding","type":"exact"},{"name":"peroxisomal membrane protein (PMP) targeting signal (mPTS) binding","type":"exact"}],"termid":"GO:0033328","terms_by_termid":{"GO:0033328":null}}


id: PBO:0057304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 515-1","termid":"PBO:0057304"}


id: PR:O74417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC14G10.04 gene.","definition_xrefs":["UniProtKB:O74417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14G10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.04","synonyms":[{"name":"Spom972h-SPCC14G10.04","type":"exact"}],"termid":"PR:O74417"}


id: PBO:0053112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 2","termid":"PBO:0053112"}


id: GO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the polyphenol, curcumin.","definition_xrefs":["PMID:21467222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"curcumin metabolic process","termid":"GO:0036039"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"curcumin catabolic process","synonyms":[{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione breakdown","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione catabolic process","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione catabolism","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione degradation","type":"exact"},{"name":"curcumin breakdown","type":"exact"},{"name":"curcumin catabolism","type":"exact"},{"name":"curcumin degradation","type":"exact"},{"name":"diferuloylmethane breakdown","type":"exact"},{"name":"diferuloylmethane catabolic process","type":"exact"},{"name":"diferuloylmethane catabolism","type":"exact"},{"name":"diferuloylmethane degradation","type":"exact"},{"name":"turmeric yellow breakdown","type":"exact"},{"name":"turmeric yellow catabolic process","type":"exact"},{"name":"turmeric yellow catabolism","type":"exact"},{"name":"turmeric yellow degradation","type":"exact"}],"termid":"GO:0036040"}


id: PBO:0038677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 3","termid":"PBO:0038677"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: PR:Q69Z14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q69Z14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.16","synonyms":[{"name":"Spom972h-vma9","type":"exact"},{"name":"V-ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q69Z14"}


id: PBO:0110065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component, with EF hand and WH2 motif Pan1","termid":"PBO:0110065"}


id: GO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron precursor cell that contributes to formation of the dorsal motor nucleus of the vagus nerve.","definition_xrefs":["PMID:21262462","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve formation","termid":"GO:0035764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation","termid":"GO:0035765"}


id: FYPO:0005720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is normal (i.e. indistinguishable from wild type) during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["GO:1990942","PMID:17881496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal mitotic metaphase chromosome recapture","synonyms":[{"name":"normal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"normal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"normal mitotic kinetochore retrieval","type":"exact"},{"name":"normal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"normal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005720"}


id: PBO:0060903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 2","termid":"PBO:0060903"}


id: PATO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000577 weight value (obsolete PATO:0000577)","termid":"PATO:0000577"}


id: GO:1901456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to toluene","termid":"GO:1901454"},{"relation_name":"positively_regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to toluene","synonyms":[{"name":"activation of response to toluene","type":"narrow"},{"name":"up regulation of response to toluene","type":"exact"},{"name":"up-regulation of response to toluene","type":"exact"},{"name":"upregulation of response to toluene","type":"exact"}],"termid":"GO:1901456"}


id: PBO:0031301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_vegetative_cell","termid":"PBO:0031301"}


id: PBO:0053462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 423","termid":"PBO:0053462"}


id: GO:0018597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + NH4+ + O2 = A + H+ + H2O + hydroxylamine.","definition_xrefs":["RHEA:27341","PMID:16347810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ammonia monooxygenase activity","secondary_identifiers":["EC:1.14.99.39","UM-BBD_enzymeID:e0061"],"termid":"GO:0018597"}


id: PBO:0085821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed during sporulation; not required for sporulation, but gene exhibits genetic interactions with other genes required for sporulation","termid":"PBO:0085821"}


id: GO:0042634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair.","definition_xrefs":["PMID:12230507","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hair cycle","termid":"GO:0042633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair cycle","termid":"GO:0042634"}


id: PBO:0057589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892b","termid":"PBO:0057589"}


id: PBO:0056143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis 1 associated protein","termid":"PBO:0056143"}


id: PBO:0075805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 4, pseudogene","termid":"PBO:0075805"}


id: GO:0071503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heparin stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heparin","termid":"GO:0071503"}


id: FYPO:0003874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in G0 phase in which the nucleus contains one or more structures of great electron density that are not found in wild type cells.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal dense body present in nucleus during G0","synonyms":[{"name":"abnormal dense body present in nucleus during cell quiescence","type":"exact"},{"name":"abnormal dense body present in nucleus during quiescence","type":"exact"}],"termid":"FYPO:0003874"}


id: PBO:0089783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP II complex subunit Trs130","termid":"PBO:0089783"}


id: PBO:0055379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2809","termid":"PBO:0055379"}


id: PATO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Multipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipotent","termid":"PATO:0001402"}


id: GO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-acetoin + NAD+ = diacetyl + H+ + NADH.","definition_xrefs":["EC:1.1.1.303","RHEA:22900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetoin dehydrogenase activity","termid":"GO:0019152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"diacetyl reductase ((R)-acetoin forming) activity","secondary_identifiers":["KEGG_REACTION:R02855","MetaCyc:RXN-11036"],"synonyms":[{"name":"(R)-acetoin dehydrogenase activity","type":"related"}],"termid":"GO:0052587"}


id: PBO:0057392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548e","termid":"PBO:0057392"}


id: GO:0010385
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to double-stranded methylated DNA. Methylation of cytosine or adenine in DNA is an important mechanism for establishing stable heritable epigenetic marks.","definition_xrefs":["PMID:17242155","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"double-stranded methylated DNA binding","termid":"GO:0010385"}


id: GO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric capsule are generated and organized. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"mesonephric capsule development","termid":"GO:0061285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}


id: PBO:0082135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-related protein of the dynactin complex; required for spindle orientation and nuclear migration; forms actin-like short filament composed of 9 or 10 Arp1p monomers; putative ortholog of mammalian centractin","termid":"PBO:0082135"}


id: PBO:0059929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 15","termid":"PBO:0059929"}


id: PBO:0091384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ca(2+)/H(+) antiporter Gdt2","termid":"PBO:0091384"}


id: GO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000489"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: GO:0005550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odorant binding","termid":"GO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pheromone binding","termid":"GO:0005550"}


id: GO:0000226
data:
  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id: PBO:0039493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A16, pseudogene","termid":"PBO:0039493"}


id: PBO:0049223
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK5 intronic transcript 1","termid":"PBO:0049223"}


id: PR:Q09765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NEDD8-activating enzyme E1 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF6","PRO:DNx","OMA:SCHPO00177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-activating enzyme E1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.12c","secondary_identifiers":["UniProtKB:Q09765"],"synonyms":[{"name":"Spom972h-UBA3","type":"exact"},{"name":"ubiquitin-activating enzyme E1 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09765"}


id: PBO:0000054
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  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh repeats","termid":"PBO:0000054"}


id: PBO:0084196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF1); contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity","termid":"PBO:0084196"}


id: GO:0016563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transcription regulator activity required for initiation or upregulation of transcription.","definition_xrefs":["ISBN:0124325653","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription activator activity (obsolete GO:0016563)","synonyms":[{"name":"transcription activating factor","type":"narrow"},{"name":"transcription activator activity","type":"exact"},{"name":"transcriptional activator activity","type":"exact"}],"termid":"GO:0016563"}


id: FYPO:0009073
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id: GO:0033154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + oligogalacturonide(out) = ADP + phosphate + oligogalacturonide(in).","definition_xrefs":["GOC:mlg","PMID:11555291","PMID:17451747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type oligogalacturonide transporter activity","secondary_identifiers":["TC:3.A.1.1.11","GO:0033155"],"synonyms":[{"name":"ATP-dependent oligogalacturonide transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled oligogalacturonide transmembrane transporter activity","type":"related"},{"name":"oligogalacturonide transmembrane transporter activity","type":"narrow"},{"name":"oligogalacturonide transporting ATPase activity","type":"related"},{"name":"oligogalacturonide-transporting ATPase activity","type":"exact"}],"termid":"GO:0033154"}


id: GO:0060974
data:
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id: GO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of a spliceosomal complex containing the SL RNA and the pre-mRNA to be joined, as well as all the spliceosomal snRNPs involved in trans leader splicing. Formation of the trans leader spliceosome brings together the quadruple SL/U4/U5/U6 snRNP and the complex of the U2 snRNP with the splice site of the pre-mRNA.","definition_xrefs":["GOC:krc","GOC:mtg_mpo","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"},{"relation_name":"part_of","term_name":"mRNA trans splicing, SL addition","termid":"GO:0045291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"trans assembly of SL-containing precatalytic spliceosome","synonyms":[{"name":"trans assembly of spliced leader-containing precatalytic spliceosome","type":"exact"}],"termid":"GO:0000352"}


id: FYPO:0007584
data:
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id: PBO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase","termid":"PBO:0001053"}


id: GO:0015982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of coupled solute translocation in which two solutes equilibrate across an osmotic barrier, the translocation of solute being coupled to the translocation of the other in the opposite direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete antiport (obsolete GO:0015982)","synonyms":[{"name":"antiport","type":"exact"}],"termid":"GO:0015982"}


id: PBO:0073403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 6","termid":"PBO:0073403"}


id: PBO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type I alpha 2 chain","termid":"PBO:0043545"}


id: GO:0032680
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["GOC:mah","PMID:10891884","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:1904467","GO:0042534"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: PBO:0081621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 550","termid":"PBO:0081621"}


id: GO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An RNA polymerase complex containing polypeptides encoded by the plastid genome. Plastid-encoded DNA-directed RNA polymerases resemble eubacterial multisubunit RNA polymerases, with a core composed of alpha, beta, and beta-prime subunits. Some forms contain multiple additional subunits. An additional sigma factor subunit is required for promoter recognition.","definition_xrefs":["GOC:krc","GOC:pj","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}


id: GO:0010590
data:
  {"annotated_genes":["SJAG_02645","SJAG_01774","SJAG_01436","SJAG_02366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90054,97188],"is_not":false,"summary":null,"term":"GO:0010590"},{"annotations":[85959,104146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001043"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:TermGenie","PMID:19959363","GOC:mtg_cell_cycle","PMID:21246752","PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01436":null,"SJAG_01774":null,"SJAG_02366":null,"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001041","GO:1902467"],"synonyms":[{"name":"regulation of cell separation after cytokinesis","type":"related"},{"name":"regulation of cell separation following cytokinesis","type":"related"},{"name":"regulation of mitotic cytokinetic cell separation","type":"exact"}],"termid":"GO:0010590","terms_by_termid":{"GO:0010590":null,"GO:2001043":null}}


id: GO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube.","definition_xrefs":["GOC:dph","GOC:jl","ISBN:0198506732","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelium","synonyms":[{"name":"epithelium morphogenesis","type":"exact"}],"termid":"GO:0002009"}


id: GO:0015540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 3-hydroxyphenyl propionate(out) + H+(out) = 3-hydroxyphenyl propionate(in) + H+(in).","definition_xrefs":["TC:2.A.1.15.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"3-hydroxyphenyl propanoate transmembrane transporter activity","termid":"GO:0015551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"3-hydroxyphenyl propionate:proton symporter activity","synonyms":[{"name":"3-hydroxyphenyl propionate porter activity","type":"related"},{"name":"3-hydroxyphenyl propionate:hydrogen ion symporter activity","type":"exact"}],"termid":"GO:0015540"}


id: PBO:0059770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 44","termid":"PBO:0059770"}


id: GO:0043158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process by which a cell becomes a heterocyst, a cell that carries out nitrogen fixation. This process involves changes to the cell wall, expression of nitrogenase and other proteins involved in nitrogen fixation, and degradation of photosystem II, which produces oxygen. This process is known to occur in some cyanobacteria.","definition_xrefs":["PMID:11121783","PMID:35744626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heterocyst development","synonyms":[{"name":"heterocyst cell differentiation","type":"related"},{"name":"heterocyst differentiation","type":"related"},{"name":"heterocyst formation","type":"exact"}],"termid":"GO:0043158"}


id: PATO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000195 startle response (obsolete PATO:0000195)","termid":"PATO:0000195"}


id: PBO:0110339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBLN pseudogene 2","termid":"PBO:0110339"}


id: GO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ferredoxin, any simple, nonenzymatic iron-sulfur protein that is characterized by having equal numbers of atoms of iron and labile sulfur. Iron and sulfur atoms are present in one or two clusters of two or four atoms of each.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ferredoxin biosynthetic process (obsolete GO:0043172)","synonyms":[{"name":"ferredoxin anabolism","type":"exact"},{"name":"ferredoxin biosynthesis","type":"exact"},{"name":"ferredoxin formation","type":"exact"},{"name":"ferredoxin synthesis","type":"exact"}],"termid":"GO:0043172"}


id: GO:0080050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed development.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed development","termid":"GO:0080050"}


id: PBO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-cytochrome p450 reductase","termid":"PBO:0004092"}


id: PBO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-28","termid":"PBO:0051332"}


id: PBO:0066553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17","termid":"PBO:0066553"}


id: PBO:0073131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 3","termid":"PBO:0073131"}


id: MOD:00759
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"fucosylated biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Fucosylated biantennary (-1 galactose)","type":"related"},{"name":"dHex(1)Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00759"}


id: MOD:00754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a bromine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brominated residue","synonyms":[{"name":"BrRes","type":"exact"}],"termid":"MOD:00754"}


id: GO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of taurine biosynthesis.","definition_xrefs":["PMID:18648510","GOC:BHF","PMID:24911144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of taurine biosynthetic process","termid":"GO:0062089"}


id: GO:0047364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + desulfoglucotropeolin = adenosine 3',5'-diphosphate + glucotropeolin + H+.","definition_xrefs":["RHEA:20281","EC:2.8.2.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-4606","KEGG_REACTION:R03214"],"synonyms":[{"name":"3'-phosphoadenosine-5'-phosphosulfate:desulfoglucosinolate sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:desulfoglucosinolate sulfotransferase activity","type":"related"},{"name":"PAPS-desulfoglucosinolate sulfotransferase activity","type":"related"},{"name":"desulphoglucosinolate sulphotransferase activity","type":"exact"}],"termid":"GO:0047364"}


id: PBO:0066568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid like 1","termid":"PBO:0066568"}


id: PATO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented obliquely relative to the long axis of the bearer.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obliquely striated","termid":"PATO:0002479"}


id: PBO:0043393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymethylenebutenolidase homolog","termid":"PBO:0043393"}


id: PBO:0064306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase 1","termid":"PBO:0064306"}


id: GO:1900345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methanethiol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methanethiol","termid":"GO:1900345"}


id: GO:0090352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the uptake, from the environment, of nitrates, inorganic or organic salts and esters of nitric acid and the subsequent reduction of nitrate ion to other, less highly oxidized, inorganic nitrogenous substances.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"nitrate assimilation","termid":"GO:0042128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0071941"],"is_obsolete":false,"name":"regulation of nitrate assimilation","termid":"GO:0090352"}


id: PBO:0027391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027391"}


id: FYPO:0004879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at the centromere central core.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal chromatin binding at centromere central core","termid":"FYPO:0004879"}


id: PBO:0081360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 189","termid":"PBO:0081360"}


id: GO:1903208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","PMID:24252804","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903208)","synonyms":[{"name":"down regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down regulation of neuron death in response to H2O2","type":"exact"},{"name":"down regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to H2O2","type":"exact"},{"name":"down-regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to H2O2","type":"exact"},{"name":"downregulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of hydrogen peroxide-induced neuron death","type":"narrow"},{"name":"inhibition of neuron death in response to H2O2","type":"narrow"},{"name":"inhibition of neuron death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of neuronal cell death in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of neuron death in response to H2O2","type":"exact"},{"name":"negative regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"neuroprotection against H2O2-induced cell death","type":"related"},{"name":"neuroprotection against hydrogen peroxide","type":"related"},{"name":"protection against H2O2-induced neuron death","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron death","type":"related"}],"termid":"GO:1903208"}


id: PBO:0067473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 604, pseudogene","termid":"PBO:0067473"}


id: PBO:0080762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 1","termid":"PBO:0080762"}


id: PR:O14417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle assembly checkpoint protein MAD2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.06","secondary_identifiers":["UniProtKB:O14417","PR:000035572"],"synonyms":[{"name":"Spom972h-MAD2L1","type":"exact"}],"termid":"PR:O14417"}


id: FYECO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Pantothenate was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate absent","termid":"FYECO:0000187"}


id: PBO:0056515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 1","termid":"PBO:0056515"}


id: PBO:0082722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the polarisome; functions in actin cytoskeletal organization during polarized growth; acts as a scaffold for Mkk1p and Mpk1p cell wall integrity signaling components; potential Cdc28p substrate; coding sequence contains length polymorphisms in different strains; SPA2 has a paralog, SPH1, that arose from the whole genome duplication","termid":"PBO:0082722"}


id: GO:1902805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:23527112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle transport","synonyms":[{"name":"activation of synaptic vesicle fission","type":"related"},{"name":"activation of synaptic vesicle fusion","type":"related"},{"name":"activation of synaptic vesicle transport","type":"narrow"},{"name":"positive regulation of synaptic vesicle fission","type":"related"},{"name":"positive regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle fission","type":"related"},{"name":"up regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle transport","type":"exact"},{"name":"up-regulation of synaptic vesicle fission","type":"related"},{"name":"up-regulation of synaptic vesicle fusion","type":"related"},{"name":"up-regulation of synaptic vesicle transport","type":"exact"},{"name":"upregulation of synaptic vesicle fission","type":"related"},{"name":"upregulation of synaptic vesicle fusion","type":"related"},{"name":"upregulation of synaptic vesicle transport","type":"exact"}],"termid":"GO:1902805"}


id: GO:0071551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RIP homotypic interaction motif (RHIM) of a protein. The RHIM is a 16-amino-acid motif found in some members, including RIP3, of a family of related kinases.","definition_xrefs":["PMID:11734559","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RIP homotypic interaction motif binding","synonyms":[{"name":"RHIM binding","type":"exact"}],"termid":"GO:0071551"}


id: PBO:0045624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 36 (pseudogene)","termid":"PBO:0045624"}


id: PBO:0088203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn2Cys6 family transcription factor; positively regulates sterol uptake under anaerobic conditions with SUT1; represses filamentation-inducing genes during non-starvation conditions; positively regulates mating along with SUT1 by repressing the expression of genes (PRR2, NCE102 and RHO5) which function as mating inhibitors; multicopy suppressor of mutations that cause low activity of the cAMP/PKA pathway; SUT2 has a paralog, SUT1, that arose from the whole genome duplication","termid":"PBO:0088203"}


id: GO:0009492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2Fe-2S electron transfer carrier (obsolete GO:0009492)","synonyms":[{"name":"2Fe-2S electron transfer carrier","type":"exact"}],"termid":"GO:0009492"}


id: RO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","termid":"RO:0002234"}


id: FYPO:0004962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:12419251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at replication origin","synonyms":[{"name":"normal protein localisation to chromatin at replication origin","type":"exact"},{"name":"normal protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0004962"}


id: GO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an afferent axon in the anterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the afferent axons in the anterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"afferent axon development in lateral line nerve","termid":"GO:0048893"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"afferent axon development in anterior lateral line nerve","termid":"GO:0048910"}


id: GO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland alveolus over time, from its formation to its mature state. The mammary gland alveolus is a sac-like structure that is found in the mature gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland lobule development","termid":"GO:0061377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland alveolus development","termid":"GO:0060749"}


id: PBO:0026994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_meiotic_cell_cycle","termid":"PBO:0026994"}


id: PBO:0049706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 1","termid":"PBO:0049706"}


id: PBO:0071815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 10","termid":"PBO:0071815"}


id: PBO:0083116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; binds tightly to ssDNA, which disrupts interaction with the MCM helicase and stalls it during replication stress; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes","termid":"PBO:0083116"}


id: GO:0034486
data:
  {"annotated_genes":["SJAG_01344","SJAG_02029","SJAG_03497","SJAG_03401","SJAG_03400","SJAG_03256","SJAG_00877","SJAG_03899","SJAG_05213","SJAG_04725","SJAG_00051","SJAG_01990","SJAG_04698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86624,101880],"is_not":false,"summary":null,"term":"GO:0034486"},{"annotations":[92228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[100022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032975"},{"annotations":[106220,98986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[86622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[114336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[111733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[93252,114338,92271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[93558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[100023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[100025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[93559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[100026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[100027,98988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[93560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[106222,100028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[100029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[100030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[92272,93253,114339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[114340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071995"},{"annotations":[110526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The process in which a solute is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01344":null,"SJAG_01990":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03497":null,"SJAG_03899":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"vacuolar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane transport","type":"exact"}],"termid":"GO:0034486","terms_by_termid":{"GO:0032974":null,"GO:0032975":null,"GO:0034486":null,"GO:0034488":null,"GO:0034490":null,"GO:0036246":null,"GO:0036249":null,"GO:0071995":null,"GO:0071996":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0140146":null,"GO:0140147":null,"GO:1901482":null,"GO:1990591":null,"GO:1990818":null}}


id: GO:0050887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of the type or quality of a sensation. Sensory modalities include touch, thermal sensation, visual sensation, auditory sensation and pain.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of sensory modality","termid":"GO:0050887"}


id: PBO:0026801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026801"}


id: PBO:0072445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 9","termid":"PBO:0072445"}


id: PATO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001119 absolute momentum value (obsolete PATO:0001119)","termid":"PATO:0001119"}


id: GO:0062144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate = chloride + H+ + L-propargylglycine.","definition_xrefs":["PMID:30867596","RHEA:59892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-propargylglycine synthase activity","termid":"GO:0062144"}


id: GO:2001159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization by the Cvt pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"regulates","term_name":"cytoplasm to vacuole targeting by the Cvt pathway","termid":"GO:0032258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"regulation of protein localization by the Cvt pathway","synonyms":[{"name":"regulation of cytoplasm to vacuole targeting","type":"exact"},{"name":"regulation of cytoplasm-to-vacuole targeting","type":"exact"}],"termid":"GO:2001159"}


id: PBO:0089475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, unknown specificity, implicated in sulfur compound metabolism","termid":"PBO:0089475"}


id: PBO:0070703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 7","termid":"PBO:0070703"}


id: SO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 2nd residue (an arginine), from the start of the H3 protein is di-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3R2_dimethylation_site","synonyms":[{"name":"H3R2 dimethylation site","type":"exact"},{"name":"H3R2me2","type":"exact"}],"termid":"SO:0001948"}


id: PBO:0083037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta adaptin-like subunit of the clathrin associated protein complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; suppressor of loss of casein kinase 1 function; the clathrin associated protein complex is also known as AP-3","termid":"PBO:0083037"}


id: FYPO:0000833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"},{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during vegetative growth","synonyms":[{"name":"normal protein level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000833"}


id: PBO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp11","termid":"PBO:0003721"}


id: GO:0030189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of a molecular chaperone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone activator activity (obsolete GO:0030189)","synonyms":[{"name":"chaperone activator activity","type":"exact"}],"termid":"GO:0030189"}


id: GO:0071836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a nectar by a cell or a tissue. Nectar is a fluid secreted by many angiosperms to promote pollination by providing a reward to pollinators. Nectar may also deter certain organisms from visiting or play other biological roles. Nectar is a complex solution that may include the following types of compounds: sugars, amino acids, organic acids, alkaloids, flavonoids, glycosides, vitamins, phenolics, metal ions, oils, free fatty acids, and proteins.","definition_xrefs":["GOC:kad","PMID:19861655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nectar secretion","synonyms":[{"name":"nectar production","type":"related"}],"termid":"GO:0071836"}


id: PR:P87139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.09 gene.","definition_xrefs":["UniProtKB:P87139","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C57A7.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.09","synonyms":[{"name":"Spom972h-SPAC57A7.09","type":"exact"}],"termid":"PR:P87139"}


id: PBO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 38","termid":"PBO:0070808"}


id: PBO:0068823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 61, pseudogene","termid":"PBO:0068823"}


id: GO:0140028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a transient pore in the plasma membrane and the attached contractile vacuolar membrane, to release water from the cell. This process does not involve fusion of the two membranes.","definition_xrefs":["PMID:22323285","Wikipedia:Exocytosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"contractile vacuole discharge","termid":"GO:0070177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"pore formation during contractile vacuole discharge","termid":"GO:0140028"}


id: GO:0097571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the left side of the cell when viewed from the dorsal side.","definition_xrefs":["GOC:giardia","ISBN:0-444-81258-X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"left nucleus","termid":"GO:0097571"}


id: PBO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-M (predicted)","termid":"PBO:0004328"}


id: MOD:01277
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:11283024","Unimod:253#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site C","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01277"}


id: PBO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroglobin","termid":"PBO:0060976"}


id: PBO:0050739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 1","termid":"PBO:0050739"}


id: PBO:0085114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleocytoplasmic shuttling assembly chaperone; co-translationally associates with nascent Rps3p in the cytoplasm and delivers it to pre-ribosomal subunits in the nucleus; required for 40S ribosomal subunit nuclear export, biogenesis and adaptation to osmotic and oxidative stress;  contains ankyrin-repeats; expression repressed by heat shock","termid":"PBO:0085114"}


id: PBO:0065974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 like","termid":"PBO:0065974"}


id: GO:0016539
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66465],"is_not":false,"summary":null,"term":"GO:0016539"}]},"cv_name":"biological_process","definition":"The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein splicing","termid":"GO:0030908"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"intein-mediated protein splicing","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"intein","type":"related"}],"termid":"GO:0016539","terms_by_termid":{"GO:0016539":null}}


id: PBO:0042803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerberus 1, DAN family BMP antagonist","termid":"PBO:0042803"}


id: PBO:0028435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_superoxide_dismutase_activity","termid":"PBO:0028435"}


id: PBO:0064164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVB","termid":"PBO:0064164"}


id: GO:1903603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thermospermine.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:24906355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"thermospermine metabolic process","termid":"GO:1903601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine biosynthetic process","synonyms":[{"name":"thermospermine anabolism","type":"exact"},{"name":"thermospermine biosynthesis","type":"exact"},{"name":"thermospermine formation","type":"exact"},{"name":"thermospermine synthesis","type":"exact"}],"termid":"GO:1903603"}


id: PR:P21536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.09","synonyms":[{"name":"A6L (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"F-ATPase subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atp8","type":"exact"}],"termid":"PR:P21536"}


id: GO:0008513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"secondary active organic cation transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-549241","GO:0015354"],"synonyms":[{"name":"organic cation porter activity","type":"related"},{"name":"polyspecific organic cation transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008513"}


id: GO:0005799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coatomer (obsolete GO:0005799)","synonyms":[{"name":"COPI vesicle","type":"related"},{"name":"coatomer","type":"exact"}],"termid":"GO:0005799"}


id: PBO:0080777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 8","termid":"PBO:0080777"}


id: PBO:0080563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 3","termid":"PBO:0080563"}


id: PBO:0062383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 1 pseudogene","termid":"PBO:0062383"}


id: PBO:0083529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SIN4/YNL236W, a subunit of the mediator complex","termid":"PBO:0083529"}


id: PBO:0088837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex kleisin subunit Rad21","termid":"PBO:0088837"}


id: PBO:0049089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 pseudogene","termid":"PBO:0049089"}


id: GO:0032654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["GOC:mah","PMID:29286137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-11 production","secondary_identifiers":["GO:0150169","GO:0045363"],"synonyms":[{"name":"regulation of IL-11 production","type":"exact"},{"name":"regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032654"}


id: GO:0006504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a geranylgeranyl group to the carboxy-terminus of a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein geranylgeranylation (obsolete GO:0006504)","synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"exact"}],"termid":"GO:0006504"}


id: GO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001197)","synonyms":[{"name":"activation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"stimulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"up regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"up-regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"upregulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"}],"termid":"GO:0001197"}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: GO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an endothelium over time, from its formation to the mature structure. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelium development","termid":"GO:0003158"}


id: PR:O14218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 phosphatases regulator ypi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.13","synonyms":[{"name":"Spom972h-SPAC6B12.13","type":"exact"}],"termid":"PR:O14218"}


id: PBO:0066836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 135","termid":"PBO:0066836"}


id: GO:0004895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the external substrate or to another cell and to initiate intracellular signaling. Cell adhesion receptors include integrins and cadherins.","definition_xrefs":["GOC:BHF-UCL","Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"},{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0098631","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cell adhesion receptor activity","termid":"GO:0004895"}


id: GO:0051670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 2,1-beta-D-fructosidic linkages in inulin.","definition_xrefs":["EC:3.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"inulinase activity","secondary_identifiers":["MetaCyc:3.2.1.7-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan fructanohydrolase activity","type":"exact"},{"name":"endo-inulinase activity","type":"exact"},{"name":"exoinulinase activity","type":"exact"},{"name":"indoinulinase activity","type":"exact"},{"name":"inulase activity","type":"exact"}],"termid":"GO:0051670"}


id: PBO:0029333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation","termid":"PBO:0029333"}


id: GO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Inflammation of prolonged duration (weeks or months) in which active inflammation, tissue destruction, and attempts at repair are proceeding simultaneously. Although it may follow acute inflammation, chronic inflammation frequently begins insidiously, as a low-grade, smoldering, often asymptomatic response.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response","termid":"GO:0002544"}


id: PBO:0067448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 570, pseudogene","termid":"PBO:0067448"}


id: PBO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Pmp20","termid":"PBO:0015261"}


id: PBO:0013478
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cut Eight supressing Kinase","termid":"PBO:0013478"}


id: GO:1905520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15797875","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic active zone assembly","termid":"GO:1905518"},{"relation_name":"is_a","term_name":"positive regulation of presynapse assembly","termid":"GO:1905608"},{"relation_name":"positively_regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of presynaptic active zone assembly","synonyms":[{"name":"activation of pre-synaptic active zone assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component formation","type":"narrow"},{"name":"activation of pre-synaptic active zone formation","type":"narrow"},{"name":"activation of presynaptic active zone assembly","type":"narrow"},{"name":"activation of presynaptic active zone formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"positive regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone formation","type":"exact"},{"name":"positive regulation of presynaptic active zone formation","type":"exact"},{"name":"up regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up regulation of presynaptic active zone assembly","type":"exact"},{"name":"up regulation of presynaptic active zone formation","type":"exact"},{"name":"up-regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up-regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up-regulation of presynaptic active zone assembly","type":"exact"},{"name":"up-regulation of presynaptic active zone formation","type":"exact"},{"name":"upregulation of pre-synaptic active zone assembly","type":"exact"},{"name":"upregulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"upregulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"upregulation of pre-synaptic active zone formation","type":"exact"},{"name":"upregulation of presynaptic active zone assembly","type":"exact"},{"name":"upregulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905520"}


id: PBO:0003159
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.6","termid":"PBO:0003159"}


id: PBO:0089545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation associated GTP binding protein Gtp1","termid":"PBO:0089545"}


id: PBO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acidosis, hyperglycinemia","termid":"PBO:0011521"}


id: GO:0004823
data:
  {"annotated_genes":["SJAG_02015","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91248,94288],"is_not":false,"summary":null,"term":"GO:0004823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H+ + Leu-tRNA(Leu).","definition_xrefs":["RHEA:11688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0140101","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"leucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03657","Reactome:R-HSA-379974","MetaCyc:LEUCINE--TRNA-LIGASE-RXN","EC:6.1.1.4","Reactome:R-HSA-380200"],"synonyms":[{"name":"leucine translase activity","type":"related"},{"name":"leucine-tRNA synthetase activity","type":"related"},{"name":"leucine:tRNALeu ligase (AMP-forming)","type":"related"},{"name":"leucyl-tRNA synthetase activity","type":"exact"},{"name":"leucyl-transfer RNA synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004823","terms_by_termid":{"GO:0004823":null}}


id: GO:0042151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in cnidoblast (nematoblast) cells. When matured, these stinging organelles store toxins and can deliver them when the cnidocil (a short extension of the cnidocyst) is stimulated by a prey or another stimulus.","definition_xrefs":["DOI:10.1139/z02-135","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"nematocyst","secondary_identifiers":["Wikipedia:Cnidocyte"],"synonyms":[{"name":"cnidocyst","type":"exact"}],"termid":"GO:0042151"}


id: GO:0120063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs throughout the length of the stomach.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach smooth muscle contraction","termid":"GO:0120063"}


id: PBO:0054837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2251","termid":"PBO:0054837"}


id: PBO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7","termid":"PBO:0090243"}


id: PBO:0003183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn7","termid":"PBO:0003183"}


id: GO:0097393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of telomeric repeat-containing RNA from a DNA template. A telomere is a complex of DNA and proteins that seals the end of a chromosome.","definition_xrefs":["GOC:al","PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"ncRNA metabolic process","termid":"GO:0034660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"telomeric repeat-containing RNA transcription","synonyms":[{"name":"TERRA transcription","type":"exact"}],"termid":"GO:0097393"}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: PBO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate aminotransferase Maa1 (predicted)","termid":"PBO:0031898"}


id: GO:0098822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine to form peptidyl-L-cysteine persulfide.","definition_xrefs":["PMID:11592406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine modification to L-cysteine persulfide","secondary_identifiers":["RESID:AA0269"],"termid":"GO:0098822"}


id: GO:1990578
data:
  {"annotated_genes":["SJAG_00784","SJAG_01227","SJAG_04583","SJAG_01785","SJAG_03281","SJAG_01422","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83623,90914,93999,94850,96775,102505,111773],"is_not":false,"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"The membrane of the perinuclear endoplasmic reticulum, which is the portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus.","definition_xrefs":["PMID:25454947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"part_of","term_name":"perinuclear endoplasmic reticulum","termid":"GO:0097038"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00784":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01785":null,"SJAG_03281":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perinuclear ER membrane","type":"exact"}],"termid":"GO:1990578","terms_by_termid":{"GO:1990578":null}}


id: PBO:0045731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL associated factor 1","termid":"PBO:0045731"}


id: SO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UST located in the 3'UTR of a protein-coding transcript.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UST","termid":"SO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_UST","synonyms":[{"name":"3' UST","type":"related"}],"termid":"SO:0001465"}


id: PBO:0069353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 613, pseudogene","termid":"PBO:0069353"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:0061354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:2000166"}


id: PBO:0056399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE3 antisense RNA 1","termid":"PBO:0056399"}


id: GO:0097463
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Spine-like process found on some neurons, e.g., periglomerular cells of olfactory cortex.","definition_xrefs":["NIF_Subcellular:nlx_subcell_1005003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gemmule","termid":"GO:0097463"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: PBO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damaged DNA binding protein Ddb1","termid":"PBO:0001289"}


id: FYPO:0001096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during nitrogen starvation","synonyms":[{"name":"normal RNA accumulation during nitrogen starvation","type":"related"},{"name":"normal RNA level during nitrogen depletion","type":"exact"},{"name":"normal RNA level during nitrogen deprivation","type":"exact"},{"name":"normal cellular RNA level during nitrogen starvation","type":"exact"},{"name":"normal mRNA level during nitrogen starvation","type":"narrow"},{"name":"normal transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001096"}


id: PR:O74988
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox5 gene.","definition_xrefs":["UniProtKB:O74988","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase polypeptide 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.10c","synonyms":[{"name":"Spom972h-cox5","type":"exact"},{"name":"cytochrome c oxidase polypeptide V (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74988"}


id: PBO:0061459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulin related anchoring protein","termid":"PBO:0061459"}


id: PBO:0051688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indolethylamine N-methyltransferase","termid":"PBO:0051688"}


id: PBO:0040714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6B transcription repressor","termid":"PBO:0040714"}


id: GO:0062096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a kinetochore into its constituent components.","definition_xrefs":["PMID:27611693","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetochore organization","termid":"GO:0051383"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinetochore disassembly","termid":"GO:0062096"}


id: PBO:0066087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 1","termid":"PBO:0066087"}


id: GO:0036090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Advancement of the cleavage furrow from the outside of the cell inward towards the center of the cell. The cleavage furrow acts as a 'purse string' which draws tight to separate daughter cells during cytokinesis and partition the cytoplasm between the two daughter cells. The furrow ingresses until a cytoplasmic bridge is formed.","definition_xrefs":["PMID:15811947","PMID:20687468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"cleavage furrow ingression","synonyms":[{"name":"cleavage furrow contraction","type":"exact"}],"termid":"GO:0036090"}


id: GO:0051716
data:
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id: PR:Q9UTE0
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sey1 gene.","definition_xrefs":["UniProtKB:Q9UTE0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sey1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.14c","synonyms":[{"name":"Spom972h-sey1","type":"exact"}],"termid":"PR:Q9UTE0"}


id: PBO:0088551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar polyphosphatase","termid":"PBO:0088551"}


id: GO:0060516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size of the prostatic bud as it forms.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"is_a","term_name":"prostate gland morphogenetic growth","termid":"GO:0060737"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary prostatic bud elongation","synonyms":[{"name":"prostate bud elongation","type":"broad"},{"name":"prostate bud elongation involved in prostate morphogenesis","type":"exact"}],"termid":"GO:0060516"}


id: PBO:0060498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1 pseudogene 3","termid":"PBO:0060498"}


id: GO:0046026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-4 = S-adenosyl-L-homocysteine + precorrin 5.","definition_xrefs":["EC:2.1.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"precorrin-4 C11-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.133-RXN","RHEA:22012"],"synonyms":[{"name":"CobM","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-4 C11 methyltransferase activity","type":"related"}],"termid":"GO:0046026"}


id: PBO:0074006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 7","termid":"PBO:0074006"}


id: PBO:0062897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 2 pseudogene 1","termid":"PBO:0062897"}


id: GO:0070798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cleistothecium development","termid":"GO:0070796"},{"relation_name":"is_a","term_name":"positive regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902060"},{"relation_name":"positively_regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cleistothecium development","termid":"GO:0070798"}


id: GO:0098521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential that inhibits muscle contraction.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory neuromuscular junction","termid":"GO:0098521"}


id: GO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vasoconstriction that is triggered by vasomotor excitation resulting from the detection of high carbon dioxide levels in the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure","termid":"GO:0002014"}


id: PBO:0042577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2C","termid":"PBO:0042577"}


id: PBO:0085517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S18 and bacterial S13; RPS18A has a paralog, RPS18B, that arose from the whole genome duplication; protein increases in abundance and relocalizes from cytoplasm to nuclear foci upon DNA replication stress","termid":"PBO:0085517"}


id: PBO:0054453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1850","termid":"PBO:0054453"}


id: PBO:0083178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the characterized snoRNA gene snR73","termid":"PBO:0083178"}


id: PBO:0030348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030348"}


id: PBO:0002802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup155","termid":"PBO:0002802"}


id: FYPO:0002649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the kinetochore is longer than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal kinetochore morphology during vegetative growth","termid":"FYPO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"elongated kinetochore during mitosis","synonyms":[{"name":"elongated kinetochore during mitosis during vegetative growth","type":"exact"},{"name":"elongated kinetochore during mitotic M phase","type":"related"},{"name":"elongated kinetochores during mitosis","type":"exact"},{"name":"extended kinetochore during mitosis","type":"exact"},{"name":"stretched kinetochore during mitosis","type":"related"}],"termid":"FYPO:0002649"}


id: PBO:0070880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 12","termid":"PBO:0070880"}


id: PR:O14063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.03c","synonyms":[{"name":"Spom972h-cut15","type":"exact"},{"name":"cell untimely torn protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine-rich RNA polymerase I suppressor protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14063"}


id: GO:0098504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any 3' DNA dephosphorylation that is involved in the process of DNA repair.","definition_xrefs":["GOC:DOS","PMID:11729194"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA 3' dephosphorylation involved in DNA repair (obsolete GO:0098504)","termid":"GO:0098504"}


id: FYPO:0007252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of binding to a lipid in a membrane by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased lipid binding","termid":"FYPO:0007251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased membrane lipid binding","synonyms":[{"name":"decreased binding to lipid in membrane","type":"exact"},{"name":"reduced membrane lipid binding","type":"exact"}],"termid":"FYPO:0007252"}


id: PBO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peloto ortholog (predicted)","termid":"PBO:0009930"}


id: GO:0052182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by a substance secreted by one of the organisms. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by host of symbiont morphology or physiology via secreted substance (obsolete GO:0052182)","termid":"GO:0052182"}


id: PBO:0053419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 359","termid":"PBO:0053419"}


id: GO:0102066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + alpha-patchoulene.","definition_xrefs":["EC:4.2.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alpha-patchoulene synthase activityy","secondary_identifiers":["MetaCyc:RXN-10603"],"termid":"GO:0102066"}


id: GO:1904647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["GOC:TermGenie","PMID:18538940","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rotenone","termid":"GO:1904647"}


id: GO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"regulation of T cell homeostatic proliferation","termid":"GO:0046013"},{"relation_name":"negatively_regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell homeostatic proliferation","synonyms":[{"name":"down regulation of T cell homeostatic proliferation","type":"exact"},{"name":"down-regulation of T cell homeostatic proliferation","type":"exact"},{"name":"downregulation of T cell homeostatic proliferation","type":"exact"},{"name":"inhibition of T cell homeostatic proliferation","type":"narrow"},{"name":"negative regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"negative regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"negative regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"negative regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046014"}


id: PBO:0087823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (67 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087823"}


id: PBO:0076030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 26","termid":"PBO:0076030"}


id: GO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal transit peptides from precursor proteins imported into the mitochondrion, typically with Arg in position P2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial processing peptidase activity (obsolete GO:0004240)","synonyms":[{"name":"MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"narrow"},{"name":"beta-mitochondrial processing peptidase","type":"narrow"},{"name":"matrix peptidase","type":"related"},{"name":"matrix processing peptidase","type":"related"},{"name":"matrix processing proteinase","type":"related"},{"name":"mitochondrial processing peptidase activity","type":"exact"},{"name":"mitochondrial protein precursor-processing proteinase activity","type":"related"},{"name":"processing enhancing peptidase (for one of two subunits)","type":"related"},{"name":"processing enhancing peptidase activity","type":"narrow"}],"termid":"GO:0004240"}


id: PBO:0063931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired immunoglobin like type 2 receptor beta","termid":"PBO:0063931"}


id: PBO:0058576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6513","termid":"PBO:0058576"}


id: PR:Q10367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo3 gene.","definition_xrefs":["UniProtKB:Q10367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase-activating protein glo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.17c","synonyms":[{"name":"ARF GAP glo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo3","type":"exact"}],"termid":"PR:Q10367"}


id: FYPO:0006501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly begins earlier than normal. An actin fusion focus normally forms during mating at the site where the two cells will fuse.","definition_xrefs":["PMID:29453312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000301","FYPO:0004803"],"is_obsolete":false,"name":"premature actin fusion focus assembly","synonyms":[{"name":"advanced actin fusion focus assembly","type":"exact"},{"name":"premature actin fusion focus formation","type":"exact"}],"termid":"FYPO:0006501"}


id: GO:0007162
data:
  {"annotated_genes":["SJAG_00926","SJAG_00156","SJAG_01778","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95478,94771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022408"},{"annotations":[99743,102433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060257"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell adhesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00926":null,"SJAG_01778":null,"SJAG_03473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell adhesion receptor inhibitor activity","type":"related"},{"name":"down regulation of cell adhesion","type":"exact"},{"name":"down-regulation of cell adhesion","type":"exact"},{"name":"downregulation of cell adhesion","type":"exact"},{"name":"inhibition of cell adhesion","type":"narrow"}],"termid":"GO:0007162","terms_by_termid":{"GO:0022408":null,"GO:0060257":null}}


id: PBO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 3","termid":"PBO:0061792"}


id: GO:0044145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"modulation of development of symbiont during interaction with host","type":"related"},{"name":"modulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044145"}


id: PBO:0043668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B","termid":"PBO:0043668"}


id: GO:0043301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of leukocyte degranulation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"negative regulation of regulated secretory pathway","termid":"GO:1903306"},{"relation_name":"negatively_regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of leukocyte degranulation","synonyms":[{"name":"down regulation of leukocyte degranulation","type":"exact"},{"name":"down-regulation of leukocyte degranulation","type":"exact"},{"name":"downregulation of leukocyte degranulation","type":"exact"},{"name":"inhibition of leukocyte degranulation","type":"narrow"},{"name":"negative regulation of immune cell degranulation","type":"exact"},{"name":"negative regulation of leucocyte degranulation","type":"exact"}],"termid":"GO:0043301"}


id: PBO:0087821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (48 kDa); involved in RNA polymerase II transcription initiation; potential Cdc28p substrate","termid":"PBO:0087821"}


id: GO:0007370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral furrow formation","termid":"GO:0007370"}


id: PBO:0047248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member B","termid":"PBO:0047248"}


id: GO:0052238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052238)","synonyms":[{"name":"aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052238"}


id: PBO:0030741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell_during_nitrogen_starvation","termid":"PBO:0030741"}


id: PBO:0079031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-4","termid":"PBO:0079031"}


id: PBO:0078738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1 like","termid":"PBO:0078738"}


id: FYPO:0006257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of prophase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of mitotic prophase","synonyms":[{"name":"normal duration of mitotic prophase during vegetative growth","type":"exact"},{"name":"normal duration of prophase during mitotic cell cycle","type":"exact"},{"name":"normal duration of prophase of mitosis","type":"exact"}],"termid":"FYPO:0006257"}


id: PBO:0067828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 130","termid":"PBO:0067828"}


id: PBO:0066503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X1","termid":"PBO:0066503"}


id: PR:Q9P7F5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1142.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1142.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.09","synonyms":[{"name":"Spom972h-SPAC1142.09","type":"exact"}],"termid":"PR:Q9P7F5"}


id: GO:1905530
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84342],"is_not":false,"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of uracil import across plasma membrane.","definition_xrefs":["GO_REF:0000058","PMID:26536126","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of uracil import across plasma membrane","termid":"GO:1905529"},{"relation_name":"negatively_regulates","term_name":"uracil import across plasma membrane","termid":"GO:0098721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905530","terms_by_termid":{"GO:1905530":null}}


id: PBO:0046179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2","termid":"PBO:0046179"}


id: _global:directly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly regulates q iff p is immediately causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"_global:immediately_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","secondary_identifiers":["RO:0002578"],"termid":"_global:directly_regulates"}


id: GO:1902789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isooctane stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22328008","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to isooctane","termid":"GO:1902788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isooctane","termid":"GO:1902789"}


id: GO:0046610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The V0 domain of a proton-transporting V-type ATPase found in the lysosomal membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar proton-transporting V-type ATPase, V0 domain","termid":"GO:0000220"},{"relation_name":"part_of","term_name":"lysosomal proton-transporting V-type ATPase complex","termid":"GO:0046611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"lysosomal proton-transporting V-type ATPase, V0 domain","synonyms":[{"name":"lysosomal hydrogen ion-transporting ATPase V0 domain","type":"exact"}],"termid":"GO:0046610"}


id: PBO:0067412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 523, pseudogene","termid":"PBO:0067412"}


id: PBO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein homolog","termid":"PBO:0000937"}


id: PBO:0077697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 1 binding protein 1","termid":"PBO:0077697"}


id: GO:0017165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides Asp-Xaa; does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides.","definition_xrefs":["EC:3.4.13.21"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidase E activity (obsolete GO:0017165)","synonyms":[{"name":"PepE gene product (Salmonella typhimurium) activity","type":"narrow"},{"name":"alpha-aspartyl dipeptidase activity","type":"exact"},{"name":"aspartyl dipeptidase activity","type":"related"},{"name":"dipeptidase E activity","type":"exact"},{"name":"peptidase E activity","type":"broad"}],"termid":"GO:0017165"}


id: PBO:0082052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-->5' exonuclease and endonuclease with a possible role in apoptosis; has similarity to mammalian and C. elegans apoptotic nucleases","termid":"PBO:0082052"}


id: PBO:0061344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 2","termid":"PBO:0061344"}


id: GO:0090331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet activation","termid":"GO:0010544"},{"relation_name":"is_a","term_name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"},{"relation_name":"is_a","term_name":"regulation of platelet aggregation","termid":"GO:0090330"},{"relation_name":"negatively_regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of platelet aggregation","synonyms":[{"name":"platelet disaggregation","type":"narrow"}],"termid":"GO:0090331"}


id: GO:0005969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate.","definition_xrefs":["EC:2.6.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"serine-pyruvate aminotransferase complex","secondary_identifiers":["GO:0005970"],"synonyms":[{"name":"serine-pyruvate aminotransferase, type 1 complex","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2B complex","type":"narrow"}],"termid":"GO:0005969"}


id: PBO:0043580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XII alpha 1 chain","termid":"PBO:0043580"}


id: PBO:0017654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stationary phase-specific homeobox transcription factor Phx1","termid":"PBO:0017654"}


id: GO:0002913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"positively_regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte anergy","synonyms":[{"name":"activation of lymphocyte anergy","type":"narrow"},{"name":"stimulation of lymphocyte anergy","type":"narrow"},{"name":"up regulation of lymphocyte anergy","type":"exact"},{"name":"up-regulation of lymphocyte anergy","type":"exact"},{"name":"upregulation of lymphocyte anergy","type":"exact"}],"termid":"GO:0002913"}


id: GO:0097350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective elimination of senescent neutrophils from the body by autoregulatory mechanisms.","definition_xrefs":["PMID:21957127","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic cell clearance","termid":"GO:0043277"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"neutrophil clearance","termid":"GO:0097350"}


id: PBO:0034250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_input_(obsolete_RO:0002401)","termid":"PBO:0034250"}


id: GO:0047030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxycyclohexanecarboxylate + NAD+ = 4-oxocyclohexanecarboxylate + H+ + NADH.","definition_xrefs":["RHEA:17429","EC:1.1.1.226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04307","MetaCyc:1.1.1.226-RXN"],"synonyms":[{"name":"trans-4-hydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"},{"name":"trans-4-hydroxycyclohexanecarboxylate:NAD+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0047030"}


id: GO:1900976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tatiopterin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of tatiopterin biosynthetic process","termid":"GO:1900974"},{"relation_name":"is_a","term_name":"positive regulation of tatiopterin metabolic process","termid":"GO:1900979"},{"relation_name":"positively_regulates","term_name":"tatiopterin biosynthetic process","termid":"GO:1900870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0042559"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0042559"],"is_obsolete":false,"name":"positive regulation of tatiopterin biosynthetic process","synonyms":[{"name":"activation of tatiopterin anabolism","type":"exact"},{"name":"activation of tatiopterin biosynthesis","type":"exact"},{"name":"activation of tatiopterin biosynthetic process","type":"narrow"},{"name":"activation of tatiopterin formation","type":"exact"},{"name":"activation of tatiopterin synthesis","type":"exact"},{"name":"positive regulation of tatiopterin anabolism","type":"exact"},{"name":"positive regulation of tatiopterin biosynthesis","type":"exact"},{"name":"positive regulation of tatiopterin formation","type":"exact"},{"name":"positive regulation of tatiopterin synthesis","type":"exact"},{"name":"up regulation of tatiopterin anabolism","type":"exact"},{"name":"up regulation of tatiopterin biosynthesis","type":"exact"},{"name":"up regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"up regulation of tatiopterin formation","type":"exact"},{"name":"up regulation of tatiopterin synthesis","type":"exact"},{"name":"up-regulation of tatiopterin anabolism","type":"exact"},{"name":"up-regulation of tatiopterin biosynthesis","type":"exact"},{"name":"up-regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"up-regulation of tatiopterin formation","type":"exact"},{"name":"up-regulation of tatiopterin synthesis","type":"exact"},{"name":"upregulation of tatiopterin anabolism","type":"exact"},{"name":"upregulation of tatiopterin biosynthesis","type":"exact"},{"name":"upregulation of tatiopterin biosynthetic process","type":"exact"},{"name":"upregulation of tatiopterin formation","type":"exact"},{"name":"upregulation of tatiopterin synthesis","type":"exact"}],"termid":"GO:1900976"}


id: GO:0006738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside catabolic process","termid":"GO:0070638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinamide riboside catabolic process","synonyms":[{"name":"N-ribosylnicotinamide catabolic process","type":"exact"},{"name":"nicotinamide riboside breakdown","type":"exact"},{"name":"nicotinamide riboside catabolism","type":"exact"},{"name":"nicotinamide riboside degradation","type":"exact"}],"termid":"GO:0006738"}


id: PBO:0041762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPN1 antisense RNA 1","termid":"PBO:0041762"}


id: PBO:0086951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Cdc42p and Rho1p; regulates AMR closure through Hof1p; inhibits Cdc42-dependent Cla4 activation at the division site, to prevent budding in the old bud neck; recruits Nis1p and Nba1p to the division site with Nap1 and the Rax1p-Rax2p dependent inheritance of Nis1p and Nba1p to bud scars to prevent division site repolarization; keeps Rho1p at the division site after AMR contraction to control secondary septum formation; relocalizes from bud neck to cytoplasm upon replication stress","termid":"PBO:0086951"}


id: GO:0002752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a cell surface pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:ar","PMID:15199967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface pattern recognition receptor signaling pathway","synonyms":[{"name":"cell surface PAMP receptor signaling pathway","type":"exact"},{"name":"cell surface PRR signaling pathway","type":"exact"},{"name":"cell surface pathogen receptor signaling pathway","type":"exact"},{"name":"cell surface pattern recognition receptor signalling pathway","type":"exact"}],"termid":"GO:0002752"}


id: PBO:0053914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1209","termid":"PBO:0053914"}


id: PBO:0057938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3663 host gene","termid":"PBO:0057938"}


id: PBO:0060157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 5 (pseudogene)","termid":"PBO:0060157"}


id: GO:0044142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's increase in size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont on or near host surface (obsolete GO:0044142)","termid":"GO:0044142"}


id: PR:Q9C103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eme1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossover junction endonuclease eme1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.06c","synonyms":[{"name":"Spom972h-eme1","type":"exact"},{"name":"essential meiotic endonuclease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C103"}


id: FYPO:0003271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-methionine as the sole sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002058","FYPO:0002060","FYPO:0001985","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on methionine sulfur source","synonyms":[{"name":"decreased cell population growth on methionine sulphur source","type":"exact"},{"name":"decreased growth on methionine sulfur source","type":"broad"},{"name":"decreased methionine utilization","type":"related"},{"name":"decreased vegetative cell population growth on methionine sulfur source","type":"exact"},{"name":"reduced cell population growth on methionine sulfur source","type":"exact"}],"termid":"FYPO:0003271"}


id: GO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the provision of a combination of complex inanimate and social stimulations in the organism's housing environment.","definition_xrefs":["GOC:sl","PMID:25934034","PMID:23644055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to environmental enrichment","synonyms":[{"name":"response to the introduction of novel objects","type":"narrow"}],"termid":"GO:0090648"}


id: FYECO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ciclopirox olamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ciclopirox olamine","synonyms":[{"name":"+ ciclopirox olamine","type":"exact"}],"termid":"FYECO:0000423"}


id: PBO:0081225
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYM4 antisense RNA 1","termid":"PBO:0081225"}


id: FYPO:0005874
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of medial membrane band assembly is decreased. Medial membrane band assembly is the assembly of a sterol-rich region of the plasma membrane at the cell surface overlying the contractile ring.","definition_xrefs":["GO:0032130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of medial membrane band assembly","synonyms":[{"name":"decreased rate of medial membrane band assembly during mitotic cell cycle","type":"related"},{"name":"decreased rate of medial membrane band assembly during vegetative growth","type":"exact"},{"name":"decreased rate of medial membrane band formation","type":"exact"},{"name":"reduced rate of medial membrane band assembly","type":"exact"}],"termid":"FYPO:0005874"}


id: PBO:0111775
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  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier","termid":"PBO:0111775"}


id: PBO:0048758
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2A pseudogene 1","termid":"PBO:0048758"}


id: GO:0044742
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the sensory perception of pain in the bitten organism.","definition_xrefs":["PMID:23034652","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of sensory perception of pain in another organism","synonyms":[{"name":"envenomation resulting in modulation of sensory perception of pain in other organism","type":"exact"},{"name":"envenomation resulting in regulation of sensory perception of pain in other organism","type":"exact"}],"termid":"GO:0044742"}


id: PBO:0063252
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha constant","termid":"PBO:0063252"}


id: PBO:0069404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 664, pseudogene","termid":"PBO:0069404"}


id: GO:0031937
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing (obsolete GO:0031937)","synonyms":[{"name":"activation of chromatin silencing","type":"narrow"},{"name":"positive regulation of heterochromatic silencing","type":"exact"},{"name":"stimulation of chromatin silencing","type":"narrow"},{"name":"up regulation of chromatin silencing","type":"exact"},{"name":"up-regulation of chromatin silencing","type":"exact"},{"name":"upregulation of chromatin silencing","type":"exact"}],"termid":"GO:0031937"}


id: PBO:0059774
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature T cell proliferation 1","termid":"PBO:0059774"}


id: PBO:0069552
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 823, pseudogene","termid":"PBO:0069552"}


id: PBO:0061119
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9","termid":"PBO:0061119"}


id: PBO:0045735
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0045735"}


id: PBO:0040906
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 10","termid":"PBO:0040906"}


id: FYPO:0002469
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are longer than normal and taper at one end to a diameter smaller than the other. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, elongated tapered cells (obsolete FYPO:0002469)","synonyms":[{"name":"inviable microcolony, elongated bottle/skittle cells","type":"exact"},{"name":"inviable microcolony, elongated skittle-shaped cells","type":"exact"},{"name":"inviable microcolony, elongated tapered vegetative cells","type":"exact"}],"termid":"FYPO:0002469"}


id: PBO:0081848
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 781","termid":"PBO:0081848"}


id: PBO:0111855
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  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U-box domain","termid":"PBO:0111855"}


id: PBO:0052994
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 5","termid":"PBO:0052994"}


id: PBO:0111745
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  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type","termid":"PBO:0111745"}


id: PBO:0047840
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box S1","termid":"PBO:0047840"}


id: PBO:0071261
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 6","termid":"PBO:0071261"}


id: PBO:0079211
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 3","termid":"PBO:0079211"}


id: MOD:00522
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex3HexNAc1Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)HexNAc(1)Pent(1)","type":"related"},{"name":"Hex3HexNAc1Pent1","type":"related"}],"termid":"MOD:00522"}


id: PBO:0075751
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 3","termid":"PBO:0075751"}


id: FYPO:0001187
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population reaches stationary phase at, and maintains, a lower cell density than wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell density in stationary phase","synonyms":[{"name":"reduced cell density in stationary phase","type":"exact"}],"termid":"FYPO:0001187"}


id: PBO:0084864
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria","termid":"PBO:0084864"}


id: GO:0009354
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of succinyl-CoA to dihydrolipoamide to form S-succinyldihydrolipoamide. The enzyme is a component of the multienzyme 2-oxoglutarate dehydrogenase complex.","definition_xrefs":["EC:2.3.1.61"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoamide S-succinyltransferase complex (obsolete GO:0009354)","synonyms":[{"name":"dihydrolipoamide S-succinyltransferase complex","type":"exact"}],"termid":"GO:0009354"}


id: PBO:0030098
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_vegetative_growth","termid":"PBO:0030098"}


id: GO:0070648
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id: GO:0016757
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activity","type":"exact"}],"termid":"GO:0016757","terms_by_termid":{"GO:0000009":null,"GO:0000026":null,"GO:0000030":null,"GO:0000033":null,"GO:0000107":null,"GO:0000310":null,"GO:0001962":null,"GO:0003825":null,"GO:0003843":null,"GO:0003879":null,"GO:0003980":null,"GO:0003999":null,"GO:0004044":null,"GO:0004048":null,"GO:0004100":null,"GO:0004169":null,"GO:0004376":null,"GO:0004377":null,"GO:0004378":null,"GO:0004422":null,"GO:0004577":null,"GO:0004578":null,"GO:0004579":null,"GO:0004581":null,"GO:0004582":null,"GO:0004583":null,"GO:0004588":null,"GO:0004731":null,"GO:0004845":null,"GO:0008479":null,"GO:0016763":null,"GO:0017061":null,"GO:0017176":null,"GO:0031278":null,"GO:0033164":null,"GO:0033201":null,"GO:0042281":null,"GO:0042283":null,"GO:0043399":null,"GO:0045140":null,"GO:0047220":null,"GO:0047657":null,"GO:0050144":null,"GO:0051751":null,"GO:0052657":null,"GO:0052917":null,"GO:0052918":null,"GO:0052925":null,"GO:0052926":null,"GO:0102704":null,"GO:0103064":null,"GO:0106073":null,"GO:0140752":null}}


id: GO:0071707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin V(D)J recombination","termid":"GO:0033152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"immunoglobulin heavy chain V-D-J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"broad"},{"name":"immunoglobulin V(D)J recombination","type":"broad"},{"name":"immunoglobulin V-D-J joining","type":"exact"}],"termid":"GO:0071707"}


id: MOD:01173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-asparaginyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["PubMed:12626404","RESID:AA0425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAsn","type":"exact"},{"name":"LIPID GPI-like-anchor amidated asparagine","type":"exact"},{"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01173"}


id: GO:0070294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal sodium ion transport","termid":"GO:0003096"},{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"renal sodium ion absorption","synonyms":[{"name":"nephron sodium ion absorption","type":"exact"},{"name":"renal sodium ion reabsorption","type":"exact"}],"termid":"GO:0070294"}


id: FYPO:0004320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered DNA level","synonyms":[{"name":"altered DNA content","type":"exact"},{"name":"altered cellular DNA level","type":"exact"},{"name":"abnormal DNA content","type":"exact"},{"name":"abnormal DNA level","type":"exact"}],"termid":"FYPO:0004320"}


id: PATO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable.","definition_xrefs":["Chemistry:http://chemistry.about.com/od/chemistryglossary/a/soliddefinition.htm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a solid","synonyms":[{"name":"solidity","type":"exact"}],"termid":"PATO:0001546"}


id: GO:0015116
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941","SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84666,96527,112804],"is_not":false,"summary":null,"term":"GO:0015116"},{"annotations":[106324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-427555","Reactome:R-HSA-3560789","Reactome:R-HSA-8875871","RHEA:34983"],"synonyms":[{"name":"sulfate permease activity","type":"related"},{"name":"sulphate transporter activity","type":"exact"}],"termid":"GO:0015116","terms_by_termid":{"GO:0008271":null,"GO:0015116":null}}


id: PBO:0047627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO induced long non-coding RNA 1","termid":"PBO:0047627"}


id: GO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the intercalary leaflet attains its shape. An intercalary leaflet is a leaflet that develops between primary leaflets.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercalary leaflet morphogenesis","termid":"GO:0060780"}


id: FYPO:0002208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a larger volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spore","termid":"FYPO:0002207"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable swollen spore with abnormal shape","secondary_identifiers":["FYPO:0002205"],"synonyms":[{"name":"inviable enlarged spore with abnormal shape","type":"related"},{"name":"inviable large spore with abnormal shape","type":"related"},{"name":"inviable spore with increased size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with increased volume and abnormal shape","type":"exact"},{"name":"inviable swollen abnormally shaped spore","type":"exact"},{"name":"inviable swollen misshapen spore","type":"related"},{"name":"lethal; swollen spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, enlarged spore with abnormal shape","type":"related"},{"name":"spore germination abolished, large spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell volume","type":"exact"},{"name":"spore germination abolished, swollen misshapen spores","type":"related"},{"name":"spore germination abolished, swollen spore with abnormal shape","type":"related"}],"termid":"FYPO:0002208"}


id: PBO:0078773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-5","termid":"PBO:0078773"}


id: PBO:0011139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin superfamily memeber, human c15orf24 ortholog","termid":"PBO:0011139"}


id: PBO:0072747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A8","termid":"PBO:0072747"}


id: FYPO:0000414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which plasma membrane fusion involved in cytogamy is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased cell fusion during mating (obsolete FYPO:0000414)","synonyms":[{"name":"cell fusion: decreased","type":"related"},{"name":"decreased cell fusion during conjugation","type":"exact"},{"name":"decreased plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"reduced cell fusion during mating","type":"exact"}],"termid":"FYPO:0000414"}


id: PR:O74380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3H7.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C3H7.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.05c","synonyms":[{"name":"Spom972h-SPBC3H7.05c","type":"exact"}],"termid":"PR:O74380"}


id: GO:0036335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of intestinal stem cells within a population of cells.","definition_xrefs":["PMID:22042863","PMID:22608824","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal stem cell homeostasis","synonyms":[{"name":"intestinal crypt stem cell homeostasis","type":"narrow"}],"termid":"GO:0036335"}


id: GO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-negative bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide biosynthetic process","termid":"GO:0002809"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002813"},{"relation_name":"negatively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","synonyms":[{"name":"down regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"down-regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"downregulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"inhibition of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"narrow"}],"termid":"GO:0002814"}


id: PBO:0085167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated covalently-bound cell wall protein; required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway; coding sequence contains length polymorphisms in different strains; PIR3 has a paralog, HSP150, that arose from the whole genome duplication","termid":"PBO:0085167"}


id: PBO:0085041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential conserved protein with a role in mRNA decapping; specifically affects the function of the decapping enzyme Dcp1p; mediates decay of the RPS28B mRNA via binding to both Rps28Bp (or Rps28Ap) and the RPS28B mRNA; mediates decay of the YRA1 mRNA by a different, translation-independent mechanism; localizes to cytoplasmic mRNA processing bodies; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085041"}


id: FYPO:0006074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at ribosomal DNA.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at rDNA during vegetative growth","termid":"FYPO:0006077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at rDNA during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006074"}


id: GO:0015745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tartrate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"tartrate transmembrane transport","synonyms":[{"name":"tartrate transport","type":"related"}],"termid":"GO:0015745"}


id: PBO:0057861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3171 host gene","termid":"PBO:0057861"}


id: PBO:0084967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase; plays a catalytic role in oxidation of cytoplasmic one-carbon units; expression is regulated by Bas1p and Bas2p, repressed by adenine, and may be induced by inositol and choline","termid":"PBO:0084967"}


id: GO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of an oxidizable substrate, for example, fructose.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to oxidizable substrate","synonyms":[{"name":"taxis in response to oxidizable substrate","type":"exact"}],"termid":"GO:0042333"}


id: PBO:0058080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4298","termid":"PBO:0058080"}


id: GO:0033919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal (1->3)-alpha-D-glucosidic links in 1,3-alpha-D-glucans.","definition_xrefs":["EC:3.2.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,3-glucosidase activity","termid":"GO:0090600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucan 1,3-alpha-glucosidase activity","secondary_identifiers":["Reactome:R-HSA-9683663","Reactome:R-HSA-9694364","MetaCyc:3.2.1.84-RXN","Reactome:R-HSA-532667","Reactome:R-HSA-548890"],"synonyms":[{"name":"1,3-alpha-D-glucan 3-glucohydrolase activity","type":"related"},{"name":"exo-1,3-alpha-glucanase activity","type":"related"}],"termid":"GO:0033919"}


id: PBO:0090679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24-like protein involved in ribosome biogenesis Rlp24","termid":"PBO:0090679"}


id: GO:0030183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.","definition_xrefs":["GO_REF:0000022","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell differentiation","secondary_identifiers":["GO:0042115"],"synonyms":[{"name":"B cell development","type":"related"},{"name":"B lymphocyte differentiation","type":"exact"},{"name":"B-cell differentiation","type":"exact"},{"name":"B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0030183"}


id: PBO:0086997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reverse transcriptase required for splicing of the COX1 pre-mRNA; encoded by a mobile group II intron within the mitochondrial COX1 gene","termid":"PBO:0086997"}


id: PR:000044736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe)","type":"exact"},{"name":"RNA polymerase II subunit 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"RNA polymerase II subunit B1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPBC28F2.12","type":"related"},{"name":"Spom-rpb1","type":"exact"}],"termid":"PR:000044736"}


id: PR:Q96WV5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02555","PANTHER:PTHR19876:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.04","secondary_identifiers":["UniProtKB:Q96WV5"],"synonyms":[{"name":"Spom972h-COPA","type":"exact"},{"name":"alpha-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV5"}


id: PBO:0090930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (calcipressin) regulatory subunit Rcn1","termid":"PBO:0090930"}


id: SO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"RTE retrotransposons are LINE elements (SO:0000194) that contain a domain with homology to the apurinic-apyrimidic (AP) endonucleases in addition to the previously identified reverse transcriptase domain.","definition_xrefs":["PMID:9729877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTE_LINE_retrotransposon","synonyms":[{"name":"RIT retrotransposon","type":"exact"},{"name":"RTE LINE retrotransposon","type":"exact"},{"name":"RTE retrotransposon","type":"exact"}],"termid":"SO:0002270"}


id: PBO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 143","termid":"PBO:0075094"}


id: PBO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin D","termid":"PBO:0044195"}


id: PBO:0073012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel modifier 1","termid":"PBO:0073012"}


id: PBO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 10","termid":"PBO:0060574"}


id: PBO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 4","termid":"PBO:0042966"}


id: PBO:0045691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain roadblock-type 2","termid":"PBO:0045691"}


id: PBO:0079323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 13","termid":"PBO:0079323"}


id: PBO:0080671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2","termid":"PBO:0080671"}


id: PBO:0039661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit mu 1","termid":"PBO:0039661"}


id: GO:0072108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003339"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0072108"}


id: PBO:0083067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a family of dihydrouridine synthases including Dus1p, Smm1p, Dus3p, and Dus4p; modifies uridine residues at position 20 of cytoplasmic tRNAs","termid":"PBO:0083067"}


id: PBO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroid differentiation regulatory factor 1","termid":"PBO:0045803"}


id: PBO:0082381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 2 subunit of the 20S proteasome; endopeptidase with trypsin-like activity that cleaves after basic residues; synthesized as a proprotein before being proteolytically processed for assembly into 20S particle; human homolog is subunit Z","termid":"PBO:0082381"}


id: SO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragment assembly is a genome assembly that orders overlapping fragments of the genome based on landmark sequences. The base pair distance between the landmarks is known allowing additivity of lengths.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly","termid":"SO:0001248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragment_assembly","synonyms":[{"name":"fragment assembly","type":"exact"},{"name":"physical map","type":"exact"}],"termid":"SO:0001249"}


id: GO:0015278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly gated calcium channel activity","secondary_identifiers":["GO:0005218","Reactome:R-HSA-9717215"],"synonyms":[{"name":"calcium-release channel activity","type":"exact"},{"name":"intracellular ligand-gated calcium channel activity","type":"related"}],"termid":"GO:0015278"}


id: GO:0070588
data:
  {"annotated_genes":["SJAG_04028","SJAG_03399","SJAG_03850","SJAG_02019","SJAG_04757","SJAG_04096","SJAG_02440","SJAG_02322","SJAG_02532","SJAG_03895","SJAG_03873","SJAG_05229","SJAG_02877","SJAG_00296","SJAG_03631","SJAG_01090","SJAG_01400","SJAG_04551","SJAG_00321","SJAG_04698","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86920,91014,91657,91887,92185,94523,97813,104859,105571,110118],"is_not":false,"summary":null,"term":"GO:0070588"},{"annotations":[93554,91838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[95808,88552,110620,88606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[87406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[87424,109558],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[98331],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[89585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00321":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion membrane transport","type":"exact"},{"name":"transmembrane calcium transport","type":"exact"}],"termid":"GO:0070588","terms_by_termid":{"GO:0036444":null,"GO:0051209":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0062313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily W member 1 pseudogene","termid":"PBO:0062313"}


id: PBO:0065955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 cohesin complex component like 1","termid":"PBO:0065955"}


id: GO:1990752
data:
  {"annotated_genes":["SJAG_03540","SJAG_00723","SJAG_00030","SJAG_02040","SJAG_00140","SJAG_00113","SJAG_02045","SJAG_02761","SJAG_00851","SJAG_02624","SJAG_01196","SJAG_02695","SJAG_01613","SJAG_02336","SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93171,99935,110227],"is_not":false,"summary":null,"term":"GO:1990752"},{"annotations":[91400,99931,93765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903754"},{"annotations":[114788,93169,99934,110223,96548,100070,85846,98502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904511"},{"annotations":[96551,95395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036449"},{"annotations":[87580,100827,84834,95397,114272,115611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035371"},{"annotations":[93172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905721"},{"annotations":[87586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any end of a microtubule. Microtubule ends differ in that the so-called microtubule plus-end is the one that preferentially grows by polymerization, with respect to the minus-end.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"microtubule","termid":"GO:0005874"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00723":null,"SJAG_00851":null,"SJAG_01196":null,"SJAG_01613":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"microtubule end","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30726171":null},"termid":"GO:1990752","terms_by_termid":{"GO:0035371":null,"GO:0036449":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905760":null,"GO:1990752":null}}


id: GO:0050495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked phosphatide following hydrolysis of a glycyl-peptide bond, as in the cleavage of arginine from the carboxy-terminal of Apg8 followed by its amidation with phosphatidylethanolamine.","definition_xrefs":["RESID:AA0346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glycyl-phosphatidylethanolamine biosynthetic process from peptidyl-glycine","synonyms":[{"name":"peptidyl-glycyl-phosphatidylethanolamine anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycyl-phosphatidylethanolamine formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycyl-phosphatidylethanolamine synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0050495"}


id: PBO:0087470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ATP-dependent Isw2p-Itc1p chromatin remodeling complex; required for repression of a-specific genes, repression of early meiotic genes during mitotic growth, and repression of INO1; similar to mammalian Acf1p, the regulatory subunit of the mammalian ATP-utilizing chromatin assembly and modifying factor (ACF) complex; ITC1 has a paralog, YPL216W, that arose from the whole genome duplication","termid":"PBO:0087470"}


id: PBO:0076807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 5","termid":"PBO:0076807"}


id: PBO:0063119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 4 pseudogene 1","termid":"PBO:0063119"}


id: PBO:0054896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2310","termid":"PBO:0054896"}


id: PBO:0066861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 161","termid":"PBO:0066861"}


id: GO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:12789499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in defense response","termid":"GO:0002679"}


id: PATO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's passing into solution.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissolved","termid":"PATO:0001986"}


id: GO:0008949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + oxalyl-CoA = CO2 + formyl-CoA.","definition_xrefs":["EC:4.1.1.8","RHEA:19333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"oxalyl-CoA decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01908","MetaCyc:OXALYL-COA-DECARBOXYLASE-RXN"],"synonyms":[{"name":"oxalyl coenzyme A decarboxylase activity","type":"related"},{"name":"oxalyl-CoA carboxy-lyase (formyl-CoA-forming)","type":"related"},{"name":"oxalyl-CoA carboxy-lyase activity","type":"related"}],"termid":"GO:0008949"}


id: GO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of the plasma membrane potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of cardiac muscle cell membrane potential","synonyms":[{"name":"calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential","type":"exact"}],"termid":"GO:0086039"}


id: PBO:0069191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 445, pseudogene","termid":"PBO:0069191"}


id: PBO:0061952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 4","termid":"PBO:0061952"}


id: GO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coagulation, the process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coagulation","synonyms":[{"name":"regulation of clotting","type":"exact"}],"termid":"GO:0050818"}


id: PBO:0040240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 7 interacting protein 2","termid":"PBO:0040240"}


id: PBO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase (predicted)","termid":"PBO:0003121"}


id: PBO:0087101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit; required for translational accuracy; homologous to mammalian ribosomal protein S23 and bacterial S12; RPS23B has a paralog, RPS23A, that arose from the whole genome duplication; deletion of both RPS23A and RPS23B is lethal","termid":"PBO:0087101"}


id: GO:0004077
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104741],"is_not":false,"summary":null,"term":"GO:0004077"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + apo-(acetyl-CoA:carbon-dioxide ligase (ADP forming)) = AMP + diphosphate + (acetyl-CoA:carbon-dioxide ligase (ADP forming)).","definition_xrefs":["EC:6.3.4.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin-protein ligase activity","termid":"GO:0018271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"biotin-[acetyl-CoA-carboxylase] ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:11756","MetaCyc:BIOTINLIG-RXN"],"synonyms":[{"name":"HCS","type":"related"},{"name":"acetyl CoA holocarboxylase synthetase activity","type":"related"},{"name":"acetyl coenzyme A holocarboxylase synthetase activity","type":"related"},{"name":"acetyl-CoA carboxylase biotin holoenzyme synthetase activity","type":"related"},{"name":"biotin holoenzyme synthetase activity","type":"related"},{"name":"biotin--[acetyl-CoA carboxylase] synthetase activity","type":"related"},{"name":"biotin--protein ligase activity","type":"related"},{"name":"biotin-acetyl coenzyme A carboxylase synthetase activity","type":"related"},{"name":"biotin-acetyl-CoA carboxylase synthetase","type":"broad"},{"name":"biotin-acetyl-CoA-carboxylase ligase activity","type":"related"},{"name":"biotin:apo-acetyl-CoA:carbon-dioxide ligase (ADP-forming) ligase (AMP-forming)","type":"related"},{"name":"biotin:apocarboxylase ligase activity","type":"related"}],"termid":"GO:0004077","terms_by_termid":{"GO:0004077":null}}


id: GO:0090296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"regulates","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"regulation of mitochondrial DNA replication","synonyms":[{"name":"regulation of mitochondrial DNA synthesis","type":"related"}],"termid":"GO:0090296"}


id: GO:0019203
data:
  {"annotated_genes":["SJAG_00039","SJAG_05314","SJAG_00129","SJAG_01646","SJAG_00182","SJAG_01862","SJAG_00685","SJAG_01427","SJAG_01531","SJAG_02713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85209,96120,85921,75103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[88054,97243,89547,73458,92726,93345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: carbohydrate phosphate + H2O = carbohydrate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00129":null,"SJAG_00182":null,"SJAG_00685":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"carbohydrate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3791349","Reactome:R-HSA-3781018","Reactome:R-HSA-3781011"],"termid":"GO:0019203","terms_by_termid":{"GO:0004331":null,"GO:0004805":null}}


id: PBO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-tRNA protein transferase (predicted)","termid":"PBO:0001323"}


id: PBO:0042246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 8","termid":"PBO:0042246"}


id: GO:0060531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquires specialized structural and functions of a neuroendocrine cell of the prostate gland acinus.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation involved in prostate gland acinus development","termid":"GO:0060531"}


id: PBO:0051994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional adhesion molecule 2","termid":"PBO:0051994"}


id: PBO:0030506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_PPT","termid":"PBO:0030506"}


id: GO:0106166
data:
  {"annotated_genes":["SJAG_05196","SJAG_04558","SJAG_03200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86362,99008,109038],"is_not":false,"summary":null,"term":"GO:0106166"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitotic spindle pole body and the nuclear membrane, in order to maintain specific membrane location of the spindle pole body.","definition_xrefs":["PMID:9763447","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"},{"relation_name":"is_a","term_name":"spindle pole body anchor activity","termid":"GO:0140475"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008093"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674","GO:0008093"],"is_obsolete":false,"name":"spindle pole body-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear membrane-spindle pole body anchor activity","type":"exact"},{"name":"spindle pole body nuclear membrane anchor activity","type":"exact"}],"termid":"GO:0106166","terms_by_termid":{"GO:0106166":null}}


id: PBO:0063443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6G","termid":"PBO:0063443"}


id: PBO:0048443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein family member 6","termid":"PBO:0048443"}


id: PBO:0073160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61G pseudogene 1","termid":"PBO:0073160"}


id: GO:0030010
data:
  {"annotated_genes":["SJAG_01901","SJAG_03596","SJAG_02737","SJAG_03453","SJAG_00030","SJAG_00594","SJAG_00317","SJAG_03126","SJAG_03486","SJAG_03625","SJAG_02536","SJAG_04724","SJAG_04624","SJAG_02695","SJAG_01373","SJAG_04522","SJAG_00845","SJAG_00216","SJAG_00514","SJAG_03754","SJAG_03581","SJAG_01794","SJAG_01456","SJAG_04653","SJAG_02838","SJAG_04322","SJAG_03705","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84145,85600,86092,87062,88474,89682,92519,93175,93404,100831,110983],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[84306,99677,103037,106958,95913,112662,114048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[115427,88789,100830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[113117,100723,93176],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[87177],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[103804,99889,108670],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[103805,112767],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[108157,90780],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"}]},"cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00216":null,"SJAG_00317":null,"SJAG_00514":null,"SJAG_00594":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01456":null,"SJAG_01794":null,"SJAG_01901":null,"SJAG_02536":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03705":null,"SJAG_03754":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04624":null,"SJAG_04653":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0030468","GO:0000283"],"synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"narrow"},{"name":"cell polarization","type":"exact"}],"termid":"GO:0030010","terms_by_termid":{"GO:0000132":null,"GO:0030010":null,"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: PBO:0056554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 3 associated protein","termid":"PBO:0056554"}


id: GO:0019577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid metabolic process","synonyms":[{"name":"aldaric acid metabolism","type":"exact"}],"termid":"GO:0019577"}


id: PBO:0071170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 10","termid":"PBO:0071170"}


id: GO:0051481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytosolic calcium ion concentration","synonyms":[{"name":"cytoplasmic calcium ion concentration reduction","type":"broad"},{"name":"cytosolic calcium ion concentration reduction","type":"exact"},{"name":"reduction of calcium ion concentration in cytoplasm","type":"broad"},{"name":"reduction of calcium ion concentration in cytosol","type":"exact"},{"name":"reduction of cytoplasmic calcium ion concentration","type":"broad"},{"name":"reduction of cytosolic calcium ion concentration","type":"exact"}],"termid":"GO:0051481"}


id: PBO:0083527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SAS10/YDL153C, a component of the small ribosomal subunit processosome","termid":"PBO:0083527"}


id: PBO:0077560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 267","termid":"PBO:0077560"}


id: GO:1904806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oxidation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22719267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein oxidation","synonyms":[{"name":"regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904806"}


id: PBO:0079025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 8-1","termid":"PBO:0079025"}


id: GO:0099007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"presynaptic endosome membrane","termid":"GO:0098954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"extrinsic component of presynaptic endosome membrane","termid":"GO:0099007"}


id: PBO:0076214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 1","termid":"PBO:0076214"}


id: PBO:0072429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 3","termid":"PBO:0072429"}


id: PBO:0041872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cas scaffold protein family member 4","termid":"PBO:0041872"}


id: PBO:0074335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1","termid":"PBO:0074335"}


id: GO:0030674
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id: GO:0035251
data:
  {"annotated_genes":["SJAG_01646","SJAG_02222","SJAG_03587","SJAG_00182","SJAG_01288","SJAG_01862","SJAG_00129","SJAG_00394","SJAG_04571","SJAG_05285","SJAG_00876","SJAG_01427","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90662,109361,87796,111999,102288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[73459,88053,97242,92725,89546,93344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[112000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[107280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[109964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to an acceptor molecule.","definition_xrefs":["PMID:19858195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"UDP-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1912353"],"termid":"GO:0035251","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0140752":null}}


id: PBO:0091301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript retaining intron IV represents 15% of total mRNA","termid":"PBO:0091301"}


id: GO:0009026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-altronate + NAD+ = D-tagaturonate + H+ + NADH.","definition_xrefs":["EC:1.1.1.58","RHEA:17813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tagaturonate reductase activity","secondary_identifiers":["MetaCyc:ALTRO-OXIDOREDUCT-RXN","KEGG_REACTION:R02555"],"synonyms":[{"name":"D-altronate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"D-tagaturonate reductase activity","type":"related"},{"name":"TagUAR","type":"related"},{"name":"altronate dehydrogenase activity","type":"related"},{"name":"altronate oxidoreductase activity","type":"related"},{"name":"altronic oxidoreductase activity","type":"related"},{"name":"tagaturonate dehydrogenase activity","type":"related"}],"termid":"GO:0009026"}


id: PBO:0041036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF pseudogene 1","termid":"PBO:0041036"}


id: GO:0099636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed flow of cytosol (the liquid component of the cytoplasm) and the organelles it contains.","definition_xrefs":["GOC:dos","Wikipedia:Cytoplasmic_streaming&oldid=706214009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic streaming","secondary_identifiers":["Wikipedia:Cytoplasmic_streaming"],"termid":"GO:0099636"}


id: PBO:0044383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7","termid":"PBO:0044383"}


id: PBO:0085536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6B has a paralog, RPS6A, that arose from the whole genome duplication","termid":"PBO:0085536"}


id: PBO:0005317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp106","termid":"PBO:0005317"}


id: GO:0010052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a guard mother cell acquires the specialized features of a guard cell.","definition_xrefs":["GOC:expert_db","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"stomatal complex morphogenesis","termid":"GO:0010103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"guard cell differentiation","synonyms":[{"name":"stomatal cell differentiation","type":"related"}],"termid":"GO:0010052"}


id: PBO:0056618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MECOM antisense RNA 1","termid":"PBO:0056618"}


id: GO:0019019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of three sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete tripartite viral genome (obsolete GO:0019019)","termid":"GO:0019019"}


id: PBO:0085596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; mutant has increased aneuploidy tolerance; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern, and bud at the distal pole; BUD9 has a paralog, BUD8, that arose from the whole genome duplication","termid":"PBO:0085596"}


id: PBO:0052986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte associated immunoglobulin like receptor 1","termid":"PBO:0052986"}


id: FYPO:0002234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular sterol ester level","synonyms":[{"name":"decreased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"decreased level of sterol ester in cell","type":"exact"},{"name":"decreased sterol ester accumulation","type":"related"},{"name":"reduced cellular sterol ester level","type":"exact"},{"name":"reduced level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002234"}


id: PBO:0070568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 34","termid":"PBO:0070568"}


id: PBO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein","termid":"PBO:0004278"}


id: PBO:0073954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 3","termid":"PBO:0073954"}


id: PBO:0058755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6879","termid":"PBO:0058755"}


id: GO:0032481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"positively_regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type I interferon production","synonyms":[{"name":"activation of type I interferon production","type":"narrow"},{"name":"positive regulation of type I IFN production","type":"exact"},{"name":"stimulation of type I interferon production","type":"narrow"},{"name":"up regulation of type I interferon production","type":"exact"},{"name":"up-regulation of type I interferon production","type":"exact"},{"name":"upregulation of type I interferon production","type":"exact"}],"termid":"GO:0032481"}


id: PBO:0063611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 2","termid":"PBO:0063611"}


id: PBO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18","termid":"PBO:0072201"}


id: FYPO:0007007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) downstream of DNA replication fork barriers.","definition_xrefs":["PMID:30667359","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"normal template switching recombination frequency downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007007"}


id: GO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane long-chain fatty acid transporter (obsolete GO:0000039)","synonyms":[{"name":"plasma membrane long-chain fatty acid transporter","type":"exact"}],"termid":"GO:0000039"}


id: PBO:0004877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing element (RRPE)-binding protein (predicted)","termid":"PBO:0004877"}


id: PBO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 4","termid":"PBO:0042705"}


id: PBO:0063707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 2","termid":"PBO:0063707"}


id: PBO:0053161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor class A domain containing 3","termid":"PBO:0053161"}


id: PBO:0044118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 3, pseudogene","termid":"PBO:0044118"}


id: PBO:0078821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-4","termid":"PBO:0078821"}


id: GO:0015859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"intracellular nucleoside transport","termid":"GO:0015859"}


id: FYPO:0002209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have a larger volume than normal and an abnormal shape. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen spore population with abnormal spore shape (obsolete FYPO:0002209)","synonyms":[{"name":"inviable enlarged spore population with abnormal spore shape","type":"related"},{"name":"inviable large spore population with abnormal spore shape","type":"related"},{"name":"inviable population of swollen spores with abnormal shape","type":"exact"},{"name":"inviable spore population with increased cell size and abnormal spore shape","type":"related"},{"name":"inviable spore population with increased cell volume and abnormal spore shape","type":"exact"},{"name":"inviable swollen spore population with abnormal shape","type":"exact"}],"termid":"FYPO:0002209"}


id: PBO:0017855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase (predicted)","termid":"PBO:0017855"}


id: PBO:0084950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL63 trans-acting MAL-activator, MAL61 maltose permease, and MAL62 maltase; on the left arm of Chromosome VIII, but not in strain S288C","termid":"PBO:0084950"}


id: PBO:0044088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A8","termid":"PBO:0044088"}


id: GO:0120065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the widest part of the pylorus that is continuous with the body of the stomach.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric antrum smooth muscle contraction","synonyms":[{"name":"antrum smooth muscle contraction","type":"exact"}],"termid":"GO:0120065"}


id: GO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a rhabdomere are generated and organized. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["PMID:22113834","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"photoreceptor cell morphogenesis","termid":"GO:0008594"},{"relation_name":"part_of","term_name":"rhabdomere development","termid":"GO:0042052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere morphogenesis","termid":"GO:0061541"}


id: PBO:0056537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 2","termid":"PBO:0056537"}


id: GO:0031805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 8 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 8 metabotropic glutamate receptor binding","synonyms":[{"name":"type 8 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031805"}


id: PBO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor Overexpression Elongated","termid":"PBO:0013439"}


id: PBO:0067005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 11, pseudogene","termid":"PBO:0067005"}


id: GO:0071368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokinin","termid":"GO:0009735"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cytokinin stimulus","termid":"GO:0071368"}


id: PATO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"movement behavioral quality","synonyms":[{"name":"movement behavioural quality","type":"exact"}],"termid":"PATO:0002076"}


id: FYPO:0001370
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04349:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04349","name":"vps28delta","uniquename":"SJAG_04349:allele-1"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_04912:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04912","name":"vps25delta","uniquename":"SJAG_04912:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[115686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[115491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[115682,115683],"is_not":false,"summary":null,"term":"FYPO:0001370"},{"annotations":[115673,115671,115672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001440"},{"annotations":[115685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"},{"annotations":[115509,115510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115651,115677,115678,115661,115660,115657,115679,115676,115680,115681,115650,115658,115674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115423,115425,115483,115422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[115732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001375"},{"annotations":[115481,115488,115480,115492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[115424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"},{"annotations":[115653],"is_not":false,"rel_names":["output_of","is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is abnormal. 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pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps25delta":{"display_name":"vps25delta","display_uniquename":"vps25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04912:allele-1","expression":"Null"}]}]},"vps28delta":{"display_name":"vps28delta","display_uniquename":"vps28delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04349:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T 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localization","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_04489","SJAG_01745","SJAG_04912","SJAG_04280","SJAG_05207","SJAG_01143","SJAG_01050","SJAG_03250","SJAG_03783","SJAG_04349","SJAG_02392","SJAG_03892"],"single_locus_genotype_uniquenames":["Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","lem2delta","vps25delta","vps28delta","pom1delta","cmp7delta","vps24delta","did4delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta","nur1delta","mid1delta"],"synonyms":[{"name":"abnormal cellular protein localisation","type":"exact"},{"name":"abnormal cellular protein localization","type":"exact"},{"name":"abnormal protein localisation","type":"exact"},{"name":"protein/peptide distribution: abnormal","type":"related"}],"termid":"FYPO:0001370","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000731":null,"FYPO:0001132":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0002870":null,"FYPO:0003657":null,"FYPO:0003946":null,"FYPO:0004718":null,"FYPO:0005503":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000815":null}}


id: GO:2000687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000687)","synonyms":[{"name":"negative regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000687"}


id: SO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by RNA interference.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_RNA_interference","termid":"SO:0001220"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_RNA_interference","synonyms":[{"name":"RNA interference silenced gene","type":"exact"},{"name":"RNAi silenced gene","type":"exact"},{"name":"gene silenced by RNA interference","type":"exact"}],"termid":"SO:0001224"}


id: PBO:0002988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.5","termid":"PBO:0002988"}


id: GO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the budding yeast plasma membrane where a daughter cell will emerge. The yeast marks this spot with bud-site selection proteins before bud emergence occurs. Actin is polarized to this spot just prior to and during bud emergence.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"incipient cellular bud site","termid":"GO:0000131"}


id: PBO:0052268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4B","termid":"PBO:0052268"}


id: PBO:0034500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_activation_of_meiosis_I_spindle_assembly_checkpoint","termid":"PBO:0034500"}


id: FYPO:0005548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to brefeldin A","synonyms":[{"name":"increased protein phosphorylation during cellular response to brefeldin A during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0005548"}


id: PBO:0003772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-binding protein 4 (predicted)","termid":"PBO:0003772"}


id: PBO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBR1 autophagy cargo receptor","termid":"PBO:0060588"}


id: PBO:0062704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily F member 3 pseudogene","termid":"PBO:0062704"}


id: PBO:0005303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp28 (predicted)","termid":"PBO:0005303"}


id: GO:0006196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of AMP, adenosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"AMP catabolic process","synonyms":[{"name":"AMP breakdown","type":"exact"},{"name":"AMP catabolism","type":"exact"},{"name":"AMP degradation","type":"exact"}],"termid":"GO:0006196"}


id: GO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-amorpha-4,11-diene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = (+)-artemisinate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:23246612","RHEA:32999","PMID:16458889","PMID:16612385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"amorpha-4,11-diene 12-monooxygenase activity","secondary_identifiers":["EC:1.14.14.114"],"termid":"GO:0062150"}


id: GO:1905826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["PMID:19716792","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of selenocysteine metabolic process","termid":"GO:1905825"},{"relation_name":"negatively_regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of selenocysteine metabolic process","synonyms":[{"name":"down regulation of selenocysteine metabolic process","type":"exact"},{"name":"down regulation of selenocysteine metabolism","type":"exact"},{"name":"down-regulation of selenocysteine metabolic process","type":"exact"},{"name":"down-regulation of selenocysteine metabolism","type":"exact"},{"name":"downregulation of selenocysteine metabolic process","type":"exact"},{"name":"downregulation of selenocysteine metabolism","type":"exact"},{"name":"inhibition of selenocysteine metabolic process","type":"narrow"},{"name":"inhibition of selenocysteine metabolism","type":"narrow"},{"name":"negative regulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905826"}


id: PBO:0036239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga8","termid":"PBO:0036239"}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7667","RHEA:56560"],"termid":"GO:0102751"}


id: PBO:0082984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoskeletal protein binding protein; required for assembly of the cortical actin cytoskeleton; interacts with proteins regulating actin dynamics and proteins required for endocytosis; found in the nucleus and cell cortex; has 3 SH3 domains","termid":"PBO:0082984"}


id: PBO:0084147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity leucine permease; functions as a branched-chain amino acid permease involved in uptake of leucine, isoleucine and valine; contains 12 predicted transmembrane domains; BAP2 has a paralog, BAP3, that arose from the whole genome duplication","termid":"PBO:0084147"}


