# terms

id: GO:1901168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-chlorocatechol.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"3-chlorocatechol metabolic process","termid":"GO:1901167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"3-chlorocatechol catabolic process","synonyms":[{"name":"3-chlorocatechol breakdown","type":"exact"},{"name":"3-chlorocatechol catabolism","type":"exact"},{"name":"3-chlorocatechol degradation","type":"exact"}],"termid":"GO:1901168"}


id: PBO:0005726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase Imt2","termid":"PBO:0005726"}


id: FYPO:0001152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during nitrogen starvation","type":"related"},{"name":"decreased RNA level during nitrogen depletion","type":"exact"},{"name":"decreased RNA level during nitrogen deprivation","type":"exact"},{"name":"decreased transcript level during nitrogen starvation","type":"exact"},{"name":"reduced RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001152"}


id: PBO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Tup11","termid":"PBO:0000265"}


id: GO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A preprogrammed process associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components. An example of this process is found in Arabidopsis thaliana, when older leaves or floral organs are shed.","definition_xrefs":["GOC:mtg_sensu","ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence (obsolete GO:0010149)","secondary_identifiers":["Wikipedia:Senescence"],"synonyms":[{"name":"senescence","type":"exact"}],"termid":"GO:0010149"}


id: PBO:0048143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD6 antisense RNA 1","termid":"PBO:0048143"}


id: PBO:0058964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 7, pseudogene","termid":"PBO:0058964"}


id: PBO:0069102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 349, pseudogene","termid":"PBO:0069102"}


id: PBO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt1","termid":"PBO:0001978"}


id: PBO:0051564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12 receptor subunit beta 1","termid":"PBO:0051564"}


id: PBO:0082624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved in transcriptional regulation","termid":"PBO:0082624"}


id: GO:0102616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin D + NAD(P) = oryzalexin A + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin A synthase activity (obsolete GO:0102616)","termid":"GO:0102616"}


id: PBO:0035762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse_without_elongation","termid":"PBO:0035762"}


id: PBO:0056758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 13, eEF1A lysine and N-terminal methyltransferase","termid":"PBO:0056758"}


id: GO:0034565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-nitro-1,2-dihydro-1,3,5-triazine + 2 H2O = 1-nitro-1,3,5-triazinane-2,4-diol.","definition_xrefs":["UM-BBD_reactionID:r0872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"1-nitro-1,2-dihydro-1,3,5-triazine hydrolase activity","secondary_identifiers":["EC:3.5.99.-"],"termid":"GO:0034565"}


id: PBO:0059699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 7","termid":"PBO:0059699"}


id: PBO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein-protein_interaction_phenotype","termid":"PBO:0036181"}


id: PBO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc13","termid":"PBO:0003792"}


id: GO:0051846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of immune avoidance that directly affects the symbiont immune system, e.g. blocking any stage in symbiont MHC class I and II presentation. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete active evasion of symbiont immune response (obsolete GO:0051846)","synonyms":[{"name":"active evasion of symbiont immune response","type":"exact"},{"name":"active immune evasion","type":"broad"}],"termid":"GO:0051846"}


id: FYPO:0001706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ionizing radiation. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001312","FYPO:0000298","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to ionizing radiation","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to gamma radiation","type":"narrow"},{"name":"normal mitotic DNA damage checkpoint during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during gamma irradiation","type":"narrow"}],"termid":"FYPO:0001706"}


id: PBO:0087296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad10p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human XPF protein","termid":"PBO:0087296"}


id: PATO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Overlap with quality inhering in a bearer by virtue of the bearer's being positioned under another entity so as to be covered by some portion of it.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlap with","termid":"PATO:0001590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapped by","termid":"PATO:0002489"}


id: GO:0015891
data:
  {"annotated_genes":["SJAG_04743","SJAG_02834","SJAG_02735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108990],"is_not":false,"summary":null,"term":"GO:0015891"},{"annotations":[106979,61342,61591,106978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"siderophore transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015892"],"synonyms":[{"name":"iron-siderochrome transport","type":"narrow"},{"name":"iron-siderophore transport","type":"exact"},{"name":"siderochrome transport","type":"narrow"},{"name":"siderophore-iron transport","type":"exact"}],"termid":"GO:0015891","terms_by_termid":{"GO:0015891":null,"GO:0044718":null}}


id: PBO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 5","termid":"PBO:0042967"}


id: _global:results_in_development_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in development of' c if and only if p is a developmental process and p results in the state of c changing from its initial state as a primordium or anlage through its mature state and to its final state.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_development_of","secondary_identifiers":["GOREL:0001009","RO:0002296"],"termid":"_global:results_in_development_of"}


id: PBO:0076050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 4","termid":"PBO:0076050"}


id: GO:0046520
data:
  {"annotated_genes":["SJAG_00880","SJAG_02305","SJAG_01057","SJAG_04178","SJAG_02706","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93102,101721,93858,105917,102166,88988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingoid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid anabolism","type":"exact"},{"name":"sphingoid biosynthesis","type":"exact"},{"name":"sphingoid formation","type":"exact"},{"name":"sphingoid synthesis","type":"exact"}],"termid":"GO:0046520","terms_by_termid":{"GO:0046512":null}}


id: PBO:0091531
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cruciform-Cutting Endonuclease","termid":"PBO:0091531"}


id: PBO:0056425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis regulator and mRNA stability factor 1","termid":"PBO:0056425"}


id: GO:0050772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"positively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axonogenesis","synonyms":[{"name":"activation of axonogenesis","type":"narrow"},{"name":"stimulation of axonogenesis","type":"narrow"},{"name":"up regulation of axonogenesis","type":"exact"},{"name":"up-regulation of axonogenesis","type":"exact"},{"name":"upregulation of axonogenesis","type":"exact"}],"termid":"GO:0050772"}


id: PBO:0074198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 8","termid":"PBO:0074198"}


id: FYPO:0007029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to polysomes is decreased.","definition_xrefs":["PMID:31285271","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to polysome","synonyms":[{"name":"decreased protein localisation to polysome","type":"exact"},{"name":"decreased protein localization to polyribosome","type":"exact"},{"name":"decreased protein localization to polysome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to polysome during vegetative growth","type":"exact"},{"name":"reduced protein localization to polysome","type":"exact"}],"termid":"FYPO:0007029"}


id: PBO:0051710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin","termid":"PBO:0051710"}


id: MOD:00506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(5) HexNAc(2)","definition_xrefs":["PubMed:111247","PubMed:1694179","PubMed:5490222","RESID:AA0151#var","Unimod:137#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-linked glycan core N4-glycosylated asparagine","synonyms":[{"name":"Hex(5)HexNAc(2)","type":"related"},{"name":"N-linked glycan core","type":"related"}],"termid":"MOD:00506"}


id: FYPO:0006252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the folding of tRNAs into the correct tertiary structure is abnormal. All tRNA folding may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["PomBase:mah","GO:0061818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal tRNA folding","synonyms":[{"name":"abnormal tRNA folding during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA folding during vegetative growth","type":"exact"}],"termid":"FYPO:0006252"}


id: GO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron apoptotic process","synonyms":[{"name":"regulation of apoptosis of neuronal cells","type":"exact"},{"name":"regulation of apoptosis of neurons","type":"exact"},{"name":"regulation of neuron apoptosis","type":"narrow"},{"name":"regulation of neuron programmed cell death","type":"exact"},{"name":"regulation of neuronal cell programmed cell death","type":"exact"},{"name":"regulation of programmed cell death of neuronal cells","type":"exact"},{"name":"regulation of programmed cell death, neurons","type":"exact"}],"termid":"GO:0043523"}


id: GO:0032784
data:
  {"annotated_genes":["SJAG_01151","SJAG_01149","SJAG_02057","SJAG_03118","SJAG_02551","SJAG_01213","SJAG_03967","SJAG_00150","SJAG_01707","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[107110,105070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[101545,113168,92009,102223,105232,111475,99244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01707":null,"SJAG_02057":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA-templated transcription elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"regulation of DNA-templated transcription, elongation","type":"exact"},{"name":"regulation of RNA elongation","type":"broad"},{"name":"regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"regulation of transcriptional elongation","type":"broad"},{"name":"transcription elongation regulator activity","type":"related"}],"termid":"GO:0032784","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0034244":null}}


id: PBO:0066519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 4","termid":"PBO:0066519"}


id: GO:0048853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forebrain are generated and organized. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cvs","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"},{"relation_name":"part_of","term_name":"brain morphogenesis","termid":"GO:0048854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain morphogenesis","synonyms":[{"name":"prosencephalon morphogenesis","type":"exact"}],"termid":"GO:0048853"}


id: PBO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.5","termid":"PBO:0002224"}


id: PBO:0074970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-12","termid":"PBO:0074970"}


id: PBO:0041835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 15","termid":"PBO:0041835"}


id: PBO:0084011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen phosphorylase required for the mobilization of glycogen; non-essential; regulated by cyclic AMP-mediated phosphorylation; phosphorylation by Cdc28p may coordinately regulate carbohydrate metabolism and the cell cycle; expression is regulated by stress-response elements and by the HOG MAP kinase pathway","termid":"PBO:0084011"}


id: GO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide production","synonyms":[{"name":"activation of antibacterial peptide production","type":"narrow"},{"name":"stimulation of antibacterial peptide production","type":"narrow"},{"name":"up regulation of antibacterial peptide production","type":"exact"},{"name":"up-regulation of antibacterial peptide production","type":"exact"},{"name":"upregulation of antibacterial peptide production","type":"exact"}],"termid":"GO:0002803"}


id: GO:0015516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: tartrate(out) + succinate(in) = tartrate(in) + succinate(out).","definition_xrefs":["TC:2.A.47.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"tartrate transmembrane transporter activity","termid":"GO:0015554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"tartrate:succinate antiporter activity","termid":"GO:0015516"}


id: PBO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as ncRNA","termid":"PBO:0000406"}


id: PBO:0054145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1512","termid":"PBO:0054145"}


id: PBO:0082751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat; required for cargo selection during vesicle formation in ER to Golgi transport; homologous to Sfb3p; SEC24 has a paralog, SFB2, that arose from the whole genome duplication","termid":"PBO:0082751"}


id: GO:0072755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to benomyl (obsolete GO:0072755)","termid":"GO:0072755"}


id: GO:0062112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a fatty acid primary amide.","definition_xrefs":["PMID:10079066","PMID:15952893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"fatty acid primary amide metabolic process","termid":"GO:0062126"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid primary amide biosynthetic process","synonyms":[{"name":"FAPA biosynthesis","type":"exact"},{"name":"FAPA biosynthetic process","type":"exact"},{"name":"fatty acid amide biosynthesis","type":"exact"}],"termid":"GO:0062112"}


id: PBO:0048206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit delta","termid":"PBO:0048206"}


id: PBO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf10","termid":"PBO:0003973"}


id: PBO:0036418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC50 domain protein, implicated in signal transduction for invasive growth Ivn1","termid":"PBO:0036418"}


id: PBO:0035838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0035838"}


id: PBO:0082945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic inorganic pyrophosphatase (PPase); homodimer that catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase","termid":"PBO:0082945"}


id: FYPO:0008114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amiloride. Cells stop growing (and may die) at a concentration of amiloride that allows wild type cells to grow.","definition_xrefs":["PMID:15537393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to amiloride","termid":"FYPO:0008114"}


id: GO:0047457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linear alpha-D-glucan = 1,5-anhydro-D-fructose + beta-D-glucose.","definition_xrefs":["EC:4.2.2.13","MetaCyc:4.2.2.13-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"exo-(1,4)-alpha-D-glucan lyase activity","synonyms":[{"name":"(1->4)-alpha-D-glucan exo-4-lyase (1,5-anhydro-D-fructose-forming)","type":"related"},{"name":"alpha-(1->4)-glucan 1,5-anhydro-D-fructose eliminase activity","type":"related"},{"name":"alpha-1,4-glucan 1,5-anhydro-D-fructose eliminase activity","type":"related"},{"name":"alpha-1,4-glucan exo-lyase activity","type":"related"},{"name":"alpha-1,4-glucan lyase activity","type":"broad"},{"name":"exo-(1->4)-alpha-D-glucan lyase activity","type":"related"},{"name":"exo-alpha-1,4-glucan lyase activity","type":"related"}],"termid":"GO:0047457"}


id: RO:HOM0000061
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Xenology that involves genes that ended up in a given genome as a result of a combination of vertical inheritance and horizontal gene transfer.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_xenology_relationship_with","termid":"RO:HOM0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pseudoparalogy_relationship_with","synonyms":[{"name":"pseudoparalogous to","type":"exact"}],"termid":"RO:HOM0000061"}


id: PBO:0056495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3","termid":"PBO:0056495"}


id: PBO:0060119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 20","termid":"PBO:0060119"}


id: PBO:0091506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA","termid":"PBO:0091506"}


id: PBO:0063142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 2","termid":"PBO:0063142"}


id: PBO:0057710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1296","termid":"PBO:0057710"}


id: PATO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000291 relative respiratory rate (obsolete PATO:0000291)","termid":"PATO:0000291"}


id: GO:0061390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the direction of cell growth.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of direction of cell growth","termid":"GO:0061390"}


id: PR:Q9P7W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ARM-like repeat-containing protein C1703.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.03c","synonyms":[{"name":"Spom972h-syo2","type":"exact"}],"termid":"PR:Q9P7W7"}


id: FYPO:0003823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when a cell is exposed to hydroxyurea. Cell separation may or may not be completed.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to hydroxyurea","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0003823"}


id: GO:0048464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the flower calyx over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower calyx development","termid":"GO:0048464"}


id: GO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["RESID:AA0203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine adenylylation","synonyms":[{"name":"peptidyl-tyrosine adenylation","type":"exact"}],"termid":"GO:0018254"}


id: PBO:0088630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane DUF2015 family conserved fungal protein","termid":"PBO:0088630"}


id: PBO:0087472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a two-component pyridoxal-5'-phosphate synthase; involved in pyridoxine (vitamin B6) biosynthesis from glyceraldehyde-3-phosphate, ribose-5-phosphate and ammonia liberated from glutamine by glutaminase; forms a complex with Sno1p that functions as an active glutaminase; member of a stationary phase-induced gene family where transcriptional induction occurs during the postdiauxic phase; co-regulated with SNO1; paralog of SNZ2 and SNZ3","termid":"PBO:0087472"}


id: PBO:0038293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_rescued_phenotype_extension","termid":"PBO:0038293"}


id: PBO:0042321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 ligand","termid":"PBO:0042321"}


id: GO:0061239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the mesonephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in mesonephric nephron morphogenesis","termid":"GO:0061239"}


id: PBO:0040030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 5","termid":"PBO:0040030"}


id: PBO:0090784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv46","termid":"PBO:0090784"}


id: GO:0042102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte proliferation","termid":"GO:0050671"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell proliferation","synonyms":[{"name":"activation of T cell proliferation","type":"narrow"},{"name":"positive regulation of T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of T cell proliferation","type":"narrow"},{"name":"up regulation of T cell proliferation","type":"exact"},{"name":"up-regulation of T cell proliferation","type":"exact"},{"name":"upregulation of T cell proliferation","type":"exact"}],"termid":"GO:0042102"}


id: PBO:0029649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_nucleus_during_vegetative_growth","termid":"PBO:0029649"}


id: GO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the phagophore assembly site (PAS).","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044085","GO:0006914","GO:0051179","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"protein localization to phagophore assembly site","synonyms":[{"name":"protein localisation to phagophore assembly site","type":"exact"},{"name":"protein localization to PAS","type":"exact"},{"name":"protein localization to pre-autophagosomal structure","type":"narrow"}],"termid":"GO:0034497"}


id: GO:1902818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethyl acetate.","definition_xrefs":["GO_REF:0000068","PMID:16013377","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate metabolic process","synonyms":[{"name":"ethyl acetate metabolism","type":"exact"},{"name":"ethyl ethanoate metabolic process","type":"exact"}],"termid":"GO:1902818"}


id: PBO:0070915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 23","termid":"PBO:0070915"}


id: GO:1901922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sclerotium development.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:21148914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerotium development","termid":"GO:1901922"}


id: PBO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS4Y1 pseudogene 1","termid":"PBO:0071948"}


id: GO:0048527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root development","termid":"GO:0048527"}


id: PBO:0034786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER phosphatidate cytidylyltransferase","termid":"PBO:0034786"}


id: GO:0045981
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of nucleotide metabolism","type":"exact"},{"name":"stimulation of nucleotide metabolic process","type":"narrow"},{"name":"up regulation of nucleotide metabolic process","type":"exact"},{"name":"up-regulation of nucleotide metabolic process","type":"exact"},{"name":"upregulation of nucleotide metabolic process","type":"exact"}],"termid":"GO:0045981","terms_by_termid":{"GO:1905857":null}}


id: GO:1903422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GOC:TermGenie","PMID:22745285","GOC:pad","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle recycling","synonyms":[{"name":"down regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of synaptic vesicle recycling","type":"exact"},{"name":"down-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of synaptic vesicle recycling","type":"exact"},{"name":"downregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of synaptic vesicle recycling","type":"exact"},{"name":"inhibition of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903422"}


id: PR:Q09751
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lactoylglutathione lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10374:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactoylglutathione lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.12c","secondary_identifiers":["UniProtKB:Q09751"],"synonyms":[{"name":"Aldoketomutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Glx I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Methylglyoxalase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-D-lactoylglutathione methylglyoxal lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC12C2.12c","type":"related"},{"name":"Spom972h-GLO1","type":"exact"},{"name":"glyoxalase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ketone-aldehyde mutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09751"}


id: GO:0002836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"regulation of response to tumor cell","termid":"GO:0002834"},{"relation_name":"positively_regulates","term_name":"response to tumor cell","termid":"GO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to tumor cell","synonyms":[{"name":"activation of response to tumor cell","type":"narrow"},{"name":"positive regulation of response to tumour cell","type":"exact"},{"name":"stimulation of response to tumor cell","type":"narrow"},{"name":"up regulation of response to tumor cell","type":"exact"},{"name":"up-regulation of response to tumor cell","type":"exact"},{"name":"upregulation of response to tumor cell","type":"exact"}],"termid":"GO:0002836"}


id: PBO:0064160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIE","termid":"PBO:0064160"}


id: GO:1902699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to acetate.","definition_xrefs":["GOC:mengo_curators","PMID:19539744","GOC:TermGenie","PMID:18727018","GO_REF:0000093"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to acetate (obsolete GO:1902699)","synonyms":[{"name":"acidogenesis","type":"broad"},{"name":"pentose breakdown to acetate","type":"exact"},{"name":"pentose catabolism to acetate","type":"exact"},{"name":"pentose degradation to acetate","type":"exact"}],"termid":"GO:1902699"}


id: FYPO:0006893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased inositol hexakisphosphate kinase activity","synonyms":[{"name":"reduced inositol hexakisphosphate kinase activity","type":"exact"}],"termid":"FYPO:0006893"}


id: PBO:0060548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX dehydratase","termid":"PBO:0060548"}


id: PBO:0062680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 1 pseudogene","termid":"PBO:0062680"}


id: GO:1901136
data:
  {"annotated_genes":["SJAG_02959","SJAG_00839","SJAG_00957","SJAG_04927","SJAG_02796","SJAG_03676","SJAG_01012","SJAG_06621","SJAG_02247","SJAG_00461","SJAG_01359","SJAG_02481","SJAG_02009","SJAG_02107","SJAG_04870","SJAG_02369","SJAG_03373","SJAG_01673","SJAG_01858","SJAG_02580","SJAG_01310","SJAG_03852","SJAG_00409","SJAG_00027","SJAG_06622","SJAG_04048","SJAG_03771","SJAG_00605","SJAG_00685","SJAG_03660","SJAG_00620","SJAG_04487","SJAG_02135","SJAG_00633","SJAG_03013","SJAG_04192","SJAG_04334","SJAG_05314","SJAG_03032","SJAG_02945","SJAG_03903","SJAG_04495","SJAG_03828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[83835,83834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[87969,97694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[112564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[101635,102001,105127,101634,105125,105590,105596,105126,94193,105122,101636,90722,105592,105124,105593,100644,105123,91212,102000,105591,105594,99832,112534,94465,105128,99573,105595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[96018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[104570,85429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[95174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[102680,90185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"},{"annotations":[100647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107769,94382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72057,75101],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[108368,87285,86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[91915,89750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[110155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01858":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03013":null,"SJAG_03032":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03771":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative breakdown","type":"exact"},{"name":"carbohydrate derivative catabolism","type":"exact"},{"name":"carbohydrate derivative degradation","type":"exact"}],"termid":"GO:1901136","terms_by_termid":{"GO:0006096":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006256":null,"GO:0009972":null,"GO:0015938":null,"GO:0034232":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0046135":null,"GO:0046168":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0097466":null,"GO:1901911":null}}


id: PR:O74760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14005:SF0","OMA:SCHPO03656","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.05","secondary_identifiers":["UniProtKB:O74760"],"synonyms":[{"name":"Spom972h-EIF3A","type":"exact"},{"name":"eIF3 p110 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 110 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3, p110 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74760"}


id: SO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which changes the localization of a polypeptide with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_localization_variant","synonyms":[{"name":"polypeptide localization variant","type":"exact"}],"termid":"SO:0001558"}


id: PBO:0046513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH6 antisense RNA 1","termid":"PBO:0046513"}


id: PBO:0090667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mmm1","termid":"PBO:0090667"}


id: PR:P22193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10870:SF0","OMA:SCHPO02073","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint control protein rad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.07","secondary_identifiers":["UniProtKB:P22193"],"synonyms":[{"name":"Spom972h-RAD1","type":"exact"}],"termid":"PR:P22193"}


id: PR:Q9HGQ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cis4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter cis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.03c","synonyms":[{"name":"Spom972h-cis4","type":"exact"}],"termid":"PR:Q9HGQ3"}


id: PBO:0091071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase Dcw1","termid":"PBO:0091071"}


id: PBO:0047861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q11.2)","termid":"PBO:0047861"}


id: PBO:0055256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2683","termid":"PBO:0055256"}


id: PBO:0052608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB-A domain containing 1","termid":"PBO:0052608"}


id: PBO:0072896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCA7/ATXN7 antisense RNA 1","termid":"PBO:0072896"}


id: GO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-galactosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-galactosamine 4-sulfate.","definition_xrefs":["EC:2.8.2.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"N-acetylgalactosamine 4-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2022063","Reactome:R-HSA-3636919","Reactome:R-HSA-6786034"],"synonyms":[{"name":"N-acetylgalactosamine 4-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0001537"}


id: GO:0051275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"beta-glucan catabolic process","synonyms":[{"name":"beta-glucan breakdown","type":"exact"},{"name":"beta-glucan catabolism","type":"exact"},{"name":"beta-glucan degradation","type":"exact"}],"termid":"GO:0051275"}


id: FYPO:0001723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more ferrichromes measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"ferrichrome absent from cell","synonyms":[{"name":"ferrichrome absent from cell during mitotic cell cycle","type":"related"},{"name":"ferrichrome absent from cell during vegetative growth","type":"exact"},{"name":"siderophore absent from cell","type":"broad"}],"termid":"FYPO:0001723"}


id: FYPO:0006956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of deferrichrome measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular deferrichrome level","synonyms":[{"name":"increased cellular deferrichrome level during mitotic cell cycle","type":"related"},{"name":"increased cellular deferrichrome level during vegetative growth","type":"exact"},{"name":"increased cellular deferriferrichrome level","type":"exact"},{"name":"increased deferrichrome accumulation","type":"related"}],"termid":"FYPO:0006956"}


id: PBO:0050990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 80","termid":"PBO:0050990"}


id: PBO:0049774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 1","termid":"PBO:0049774"}


id: GO:0044607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism has a negative effect on the functioning of the host's endothelial cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by symbiont of host endothelial cells (obsolete GO:0044607)","termid":"GO:0044607"}


id: GO:0033347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a tetrose, any monosaccharide with a chain of four carbon atoms in the molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrose metabolic process","synonyms":[{"name":"tetrose metabolism","type":"exact"}],"termid":"GO:0033347"}


id: FYPO:0003644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to thiamine starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to thiamine starvation","termid":"FYPO:0001244"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to thiamine starvation","synonyms":[{"name":"RNA absent from cell during cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during cellular response to vitamin B1 starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to thiamine starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to thiamine starvation","type":"exact"}],"termid":"FYPO:0003644"}


id: PBO:0043553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL4A2 antisense RNA 2","termid":"PBO:0043553"}


id: PR:000027499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p38-like stress-activated mitogen-activated protein kinase that is a translation product of the yeast HOG1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","PMID:10207620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase HOG1","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"HOG1","type":"exact"},{"name":"MAP kinase spc1","type":"exact"},{"name":"STY1","type":"related"}],"termid":"PR:000027499"}


id: PBO:0060420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase like 1","termid":"PBO:0060420"}


id: SO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A vaultRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"vaultRNA_primary_transcript","termid":"SO:0002040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_vaultRNA_primary_transcript","synonyms":[{"name":"miR encoding vaultRNA primary transcript","type":"exact"}],"termid":"SO:0002041"}


id: PBO:0080327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 91 pseudogene","termid":"PBO:0080327"}


id: PBO:0041536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 67","termid":"PBO:0041536"}


id: GO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy in which to pass the winter. It is characterized by narcosis and by sharp reduction in body temperature and metabolic activity and by a depression of vital signs.","definition_xrefs":["GOC:jl","PMID:1945046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hibernation","secondary_identifiers":["Wikipedia:Hibernation"],"termid":"GO:0042750"}


id: GO:1904598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:krc","PMID:18245812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement involved in inflammatory response wound healing","termid":"GO:1904596"},{"relation_name":"is_a","term_name":"positive regulation of connective tissue replacement","termid":"GO:1905205"},{"relation_name":"positively_regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"activation of connective tissue replacement during inflammatory response","type":"related"},{"name":"activation of connective tissue replacement involved in inflammatory response wound healing","type":"narrow"},{"name":"activation of fibrosis during inflammatory response","type":"narrow"},{"name":"positive regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"positive regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up-regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up-regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up-regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"upregulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"upregulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"upregulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904598"}


id: PBO:0073639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 26, pseudogene","termid":"PBO:0073639"}


id: PBO:0068578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 29, pseudogene","termid":"PBO:0068578"}


id: GO:0004343
data:
  {"annotated_genes":["SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69784],"is_not":false,"summary":null,"term":"GO:0004343"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine 6-phosphate + acetyl-CoA = N-acetyl-D-glucosamine 6-phosphate + CoA + H+.","definition_xrefs":["EC:2.3.1.4","RHEA:10292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glucosamine 6-phosphate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUCOSAMINEPNACETYLTRANS-RXN","Reactome:R-HSA-449734","KEGG_REACTION:R02058"],"synonyms":[{"name":"D-glucosamine-6-P N-acetyltransferase activity","type":"related"},{"name":"N-acetylglucosamine-6-phosphate synthase activity","type":"related"},{"name":"acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase activity","type":"related"},{"name":"aminodeoxyglucosephosphate acetyltransferase activity","type":"related"},{"name":"glucosamine 6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-phosphate N-acetyltransferase activity","type":"exact"},{"name":"phosphoglucosamine N-acetylase activity","type":"related"},{"name":"phosphoglucosamine acetylase activity","type":"related"},{"name":"phosphoglucosamine transacetylase activity","type":"related"}],"termid":"GO:0004343","terms_by_termid":{"GO:0004343":null}}


id: PBO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.33","termid":"PBO:0002517"}


id: PBO:0070755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 11","termid":"PBO:0070755"}


id: PBO:0081787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 714","termid":"PBO:0081787"}


id: PATO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outward.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed","synonyms":[{"name":"flared","type":"exact"}],"termid":"PATO:0001785"}


id: PBO:0054139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1505","termid":"PBO:0054139"}


id: PBO:0082446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex; participates in the regulation of sulfur metabolism","termid":"PBO:0082446"}


id: GO:0033951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 1,4-beta-D-xylose residues from the reducing end of oligosaccharides.","definition_xrefs":["EC:3.2.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide reducing-end xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.156-RXN"],"synonyms":[{"name":"Rex","type":"related"},{"name":"beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranose reducing-end xylanase activity","type":"related"},{"name":"reducing end xylose-releasing exo-oligoxylanase activity","type":"related"}],"termid":"GO:0033951"}


id: GO:0015371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"galactose:sodium symporter activity","termid":"GO:0015371"}


id: PBO:0047211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member B","termid":"PBO:0047211"}


id: PBO:0069496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 763, pseudogene","termid":"PBO:0069496"}


id: PBO:0080944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger B-box domain containing","termid":"PBO:0080944"}


id: GO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"positively_regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell tolerance induction","synonyms":[{"name":"activation of T cell tolerance induction","type":"narrow"},{"name":"positive regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"positive regulation of T-cell tolerance induction","type":"exact"},{"name":"positive regulation of T-lymphocyte tolerance induction","type":"exact"},{"name":"stimulation of T cell tolerance induction","type":"narrow"},{"name":"up regulation of T cell tolerance induction","type":"exact"},{"name":"up-regulation of T cell tolerance induction","type":"exact"},{"name":"upregulation of T cell tolerance induction","type":"exact"}],"termid":"GO:0002666"}


id: GO:1901011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (S)-reticuline.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-reticuline catabolic process (obsolete GO:1901011)","synonyms":[{"name":"(S)-reticuline breakdown","type":"exact"},{"name":"(S)-reticuline catabolism","type":"exact"},{"name":"(S)-reticuline degradation","type":"exact"}],"termid":"GO:1901011"}


id: PBO:0111777
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type","termid":"PBO:0111777"}


id: PBO:0077278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 17","termid":"PBO:0077278"}


id: PBO:0038874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 1","termid":"PBO:0038874"}


id: RO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exports","termid":"RO:0002345"}


id: GO:0033638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the host's tolerance to high temperatures, above the optimal temperature for that organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","PMID:17425405","PMID:35350854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host response to abiotic stimulus","termid":"GO:0033635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host heat acclimation","synonyms":[{"name":"modulation by symbiont of host response to heat","type":"related"},{"name":"response to heat shock","type":"related"}],"termid":"GO:0033638"}


id: GO:0061536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glycine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine transport","termid":"GO:0015816"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glycine secretion","termid":"GO:0061536"}


id: SO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TAA.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre_stop_codon","synonyms":[{"name":"Ochre stop codon","type":"exact"}],"termid":"SO:0002334"}


id: PBO:0086246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may form an active mitochondrial KHE system; mitochondrial inner-membrane protein; non-essential gene; KHE system stands for K+/H+ exchanger system","termid":"PBO:0086246"}


id: PBO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protease Sdd3","termid":"PBO:0090121"}


id: PBO:0080146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 2","termid":"PBO:0080146"}


id: PBO:0057008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 100","termid":"PBO:0057008"}


id: PBO:0061087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 5","termid":"PBO:0061087"}


id: PBO:0070361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 37","termid":"PBO:0070361"}


id: PBO:0085443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates multiple phosphatidylinositol phosphates; involved in trans Golgi network-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches; contains Sac1 and 5-ptase domains; INP53 has a paralog, INP52, that arose from the whole genome duplication","termid":"PBO:0085443"}


id: PBO:0031340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_N-ethylmaleimide","termid":"PBO:0031340"}


id: PBO:0089808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase","termid":"PBO:0089808"}


id: SO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 24-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_24_signal","synonyms":[{"name":"minus 24 signal","type":"related"}],"termid":"SO:0001674"}


id: PBO:0028381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_DNA_N-glycosylase_activity","termid":"PBO:0028381"}


id: PBO:0082731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; involved in histone deacetylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082731"}


id: FYPO:0006630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, elongated, has no septum, and contains four nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002024"},{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated tetranucleate aseptate vegetative cell","synonyms":[{"name":"elongated tetranucleate aseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated tetranucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated tetranucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated tetranucleate aseptate vegetative cell","type":"exact"}],"termid":"FYPO:0006630"}


id: GO:1905181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of urease activity.","definition_xrefs":["GO_REF:0000059","PMID:16244137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urease activity","synonyms":[{"name":"regulation of urea amidohydrolase activity","type":"exact"}],"termid":"GO:1905181"}


id: PBO:0041175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 1 member A1 pseudogene 1","termid":"PBO:0041175"}


id: MOD:00231
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts six L-cysteine residues and a six-iron six-sulfur cluster to hexakis-L-cysteinyl hexairon hexasulfide.","definition_xrefs":["PubMed:1318833","RESID:AA0226","PubMed:1311311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexakis-L-cysteinyl hexairon hexasulfide","synonyms":[{"name":"hexa-mu3-sulfido-hexakis(S-cysteinyliron)","type":"exact"},{"name":"hexa-mu3-sulfido-hexakis(cysteinato-kappaS)-hexairon","type":"exact"},{"name":"hexakis-L-cysteinyl hexairon hexasulfide","type":"exact"},{"name":"prismane iron-sulfur cofactor","type":"exact"}],"termid":"MOD:00231"}


id: PBO:0043540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 8","termid":"PBO:0043540"}


id: GO:0018893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond. Dibenzofuran is a white crystalline solid created from the production of coal tar and used as an insecticide and an intermediate in the production of other chemicals.","definition_xrefs":["UM-BBD_pathwayID:dbf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dibenzofuran metabolic process","synonyms":[{"name":"dibenzofuran metabolism","type":"exact"}],"termid":"GO:0018893"}


id: FYPO:0007439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of eisosome is abnormal. For example, an eisosome may protrude into the cell interior. The eisosome consists of a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face.","definition_xrefs":["GO:0032126","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome","termid":"FYPO:0007262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal eisosome morphology","synonyms":[{"name":"abnormal eisosome morphology during mitotic cell cycle","type":"related"},{"name":"abnormal eisosome morphology during vegetative growth","type":"exact"},{"name":"eisosome remodeling","type":"related"}],"termid":"FYPO:0007439"}


id: PBO:0067197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 261, pseudogene","termid":"PBO:0067197"}


id: GO:0016310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphorylation","secondary_identifiers":["Wikipedia:Phosphorylation"],"termid":"GO:0016310"}


id: PATO:0002239
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape that inheres in the bearer by virtue of the bearer's nearly) symmetric shape wide at its ends and narrow in the middle, resembling the figure of number 8.","direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hourglass-shaped","synonyms":[{"name":"figure 8 shaped","type":"exact"}],"termid":"PATO:0002239"}


id: PBO:0090868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase Trm12","termid":"PBO:0090868"}


id: SO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5' most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_clip","synonyms":[{"name":"5' clip","type":"related"},{"name":"five prime clip","type":"exact"}],"termid":"SO:0000555"}


id: PBO:0055668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 4","termid":"PBO:0055668"}


id: PBO:0067309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 395, pseudogene","termid":"PBO:0067309"}


id: PBO:0060914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 1","termid":"PBO:0060914"}


id: GO:0033462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GGC codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033462"}


id: GO:2001063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteropolysaccharide binding","termid":"GO:0010297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glucomannan binding","termid":"GO:2001063"}


id: GO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the mammary placode forms. The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper.","definition_xrefs":["GOC:dph","PMID:16168142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"mammary gland formation","termid":"GO:0060592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary placode formation","termid":"GO:0060596"}


id: GO:0103075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(indol-3-yl)pyruvate + NADPH + O2 + H+ = indole-3-acetate + carbon dioxide + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"indole-3-pyruvate monooxygenase activity","secondary_identifiers":["RHEA:34331","MetaCyc:RXNDQC-2"],"termid":"GO:0103075"}


id: GO:1990983
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99286],"is_not":false,"summary":null,"term":"GO:1990983"}]},"cv_name":"biological_process","definition":"A process in which translation initiation is regulated by post-translation modifications of a tRNA molecule.","definition_xrefs":["PMID:27745969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by tRNA modification","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA demethylation","type":"broad"}],"termid":"GO:1990983","terms_by_termid":{"GO:1990983":null}}


id: PBO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1 pseudogene 3","termid":"PBO:0051633"}


id: PBO:0089559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef1","termid":"PBO:0089559"}


id: GO:0048577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["GOC:jid","ISBN:0582015952","GOC:pj","ISBN:0697037754","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of short-day photoperiodism, flowering","termid":"GO:0048587"},{"relation_name":"negatively_regulates","term_name":"short-day photoperiodism, flowering","termid":"GO:0048575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of short-day photoperiodism, flowering","synonyms":[{"name":"down regulation of short-day photoperiodism, flowering","type":"exact"},{"name":"down-regulation of short-day photoperiodism, flowering","type":"exact"},{"name":"downregulation of short-day photoperiodism, flowering","type":"exact"},{"name":"inhibition of short-day photoperiodism, flowering","type":"narrow"}],"termid":"GO:0048577"}


id: GO:0032561
data:
  {"annotated_genes":["SJAG_00983","SJAG_00044","SJAG_02640","SJAG_02595","SJAG_04233","SJAG_00663","SJAG_00231","SJAG_03732","SJAG_04862","SJAG_01929","SJAG_01438","SJAG_02605","SJAG_01696","SJAG_05332","SJAG_02366","SJAG_04003","SJAG_04351","SJAG_02824","SJAG_03846","SJAG_02292","SJAG_00801","SJAG_00906","SJAG_02180","SJAG_02374","SJAG_01909","SJAG_03915","SJAG_01534","SJAG_04874","SJAG_00344","SJAG_03275","SJAG_01277","SJAG_03371","SJAG_01774","SJAG_00360","SJAG_04004","SJAG_01449","SJAG_02856","SJAG_04387","SJAG_01339","SJAG_01379","SJAG_02848","SJAG_03188","SJAG_04410","SJAG_03072","SJAG_03342","SJAG_02604","SJAG_02384","SJAG_02509","SJAG_00457","SJAG_03453","SJAG_04375","SJAG_04157","SJAG_02601","SJAG_04343","SJAG_02171","SJAG_02684","SJAG_02520","SJAG_00118","SJAG_02302","SJAG_01789","SJAG_03461","SJAG_02656","SJAG_00226","SJAG_01215","SJAG_00424","SJAG_03959","SJAG_03684","SJAG_01769","SJAG_01358","SJAG_03137","SJAG_00466","SJAG_02331","SJAG_01456","SJAG_02233","SJAG_00414","SJAG_02661","SJAG_04940","SJAG_00840","SJAG_01558","SJAG_00968","SJAG_01391","SJAG_02444","SJAG_05030","SJAG_01695","SJAG_04470","SJAG_01851","SJAG_04509","SJAG_00031","SJAG_04666","SJAG_00659","SJAG_00430","SJAG_03374","SJAG_03688","SJAG_02353","SJAG_04366"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87073,106739,88634,87897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[111860,85121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[113648,114618,115091,98955,88188,94495,97143,85122,89806,101596,103365,96839,88129,91430,88224,99859,102194,105532,89006,94496,105958,100840,107038,114617,114619,112152,102738,104902,90528,92470,101239,106740,113654,95819,84157,88635,100789,85964,90480,99682,89071,108598,87502,100111,103386,105464,108599,103626,90430,60524,108597,94580,93268,95889,105051,93947,87074,94096,114504,113486,98835,97032,90056,98812,99069,85475,100201,104664,104930,106741,97954,108329,88914,89602,85670,103325,106733,107634,89805,109729,113653,101085,115090,91965,92708,89459,89659,112268,103618,106467,90703,96294,109062,89804,96137,97422,97470,97634,107716,112114,87295,112798,86531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl ribonucleotide, any compound consisting of guanosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl nucleotide binding","termid":"GO:0019001"},{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanyl ribonucleotide binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0032561","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: FYPO:0006822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and elongates at a normal rate, but divides when a shorter time than normal has elapsed since the previous cell division. Daughter cells therefore have an abnormally low volume. Note that these small viable cells result from a cell cycle size regulation defect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"has_part","term_name":"normal vegetative cell growth rate","termid":"FYPO:0006819"},{"relation_name":"is_a","term_name":"viable small vegetative cell","termid":"FYPO:0000648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000337","FYPO:0000257","FYPO:0001320","FYPO:0005447","FYPO:0000004"],"is_obsolete":false,"name":"viable small vegetative cell with normal cell growth rate","synonyms":[{"name":"mitosis with small cell size and normal cell growth rate","type":"related"},{"name":"reduced size at cell division with normal cell growth rate","type":"related"},{"name":"small viable vegetative cell with normal cell growth rate","type":"exact"},{"name":"viable small cell with normal cell growth rate during vegetative growth","type":"exact"},{"name":"viable small vegetative cell with normal cell growth rate","type":"broad"},{"name":"viable small vegetative cell with normal cell growth rate during mitotic cell cycle","type":"related"},{"name":"viable small vegetative cell with premature mitosis","type":"exact"},{"name":"wee","type":"exact"}],"termid":"FYPO:0006822"}


id: PBO:0090043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductase Pbr1, implicated in lipid metabolism","termid":"PBO:0090043"}


id: FYPO:0003958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal diacylglycerol O-acyltransferase activity","synonyms":[{"name":"abnormal DGAT activity","type":"exact"},{"name":"abnormal diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003958"}


id: FYPO:0000588
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115353],"is_not":false,"summary":null,"term":"FYPO:0000588"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased sporulation frequency","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"increased frequency of ascospore formation","type":"exact"},{"name":"increased sporulation","type":"exact"},{"name":"sporulation: increased","type":"related"}],"termid":"FYPO:0000588","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000588":null}}


id: GO:0018888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chloroacrylic acid, ClHC=CHCOOH, a chlorinated derivative of acrylic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-chloroacrylic acid metabolic process","secondary_identifiers":["UM-BBD_pathwayID:caa"],"synonyms":[{"name":"3-chloroacrylic acid metabolism","type":"exact"}],"termid":"GO:0018888"}


id: PBO:0067395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 500, pseudogene","termid":"PBO:0067395"}


id: GO:1904968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation.","definition_xrefs":["GOC:TermGenie","PMID:23770679","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051987"},{"relation_name":"is_a","term_name":"regulation of spindle attachment to meiosis I kinetochore","termid":"GO:1904967"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"spindle attachment to meiosis I kinetochore","termid":"GO:0051455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of spindle attachment to meiosis I kinetochore","synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"narrow"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"narrow"},{"name":"activation of monopolar attachment","type":"narrow"},{"name":"activation of sister kinetochore mono-orientation","type":"narrow"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"positive regulation of monopolar attachment","type":"exact"},{"name":"positive regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"up regulation of monopolar attachment","type":"exact"},{"name":"up regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"up-regulation of monopolar attachment","type":"exact"},{"name":"up-regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"upregulation of monopolar attachment","type":"exact"},{"name":"upregulation of sister kinetochore mono-orientation","type":"exact"}],"termid":"GO:1904968"}


id: PBO:0071879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 17","termid":"PBO:0071879"}


id: PBO:0086483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative, non-essential component vacuolar ATPase; conserved in fungi; SWAT-GFP fusion protein localizes to vacuole membrane; partially overlaps the dubious genes YPR169W-A, YPR170W-A and YRP170C","termid":"PBO:0086483"}


id: PBO:0090178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A","termid":"PBO:0090178"}


id: PBO:0083972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase); likely involved in carbohydrate metabolism; GFP-fusion protein localizes to both the nucleus and cytoplasm and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0083972"}


id: GO:0060258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process in which a multicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth","termid":"GO:0010570"},{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"},{"relation_name":"negatively_regulates","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth","termid":"GO:0060258"}


id: PBO:0071502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 5","termid":"PBO:0071502"}


id: PR:O42996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C27B12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.05","synonyms":[{"name":"Spom972h-SPBC27B12.05","type":"exact"}],"termid":"PR:O42996"}


id: GO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of B cells in the bone marrow.","definition_xrefs":["GOC:jal","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell tolerance induction","synonyms":[{"name":"central B lymphocyte tolerance induction","type":"exact"},{"name":"central B-cell tolerance induction","type":"exact"},{"name":"central B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002510"}


id: PBO:0089891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Dip5","termid":"PBO:0089891"}


id: PBO:0072810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 5","termid":"PBO:0072810"}


id: FYPO:0008158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased at the silent mating-type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-S10 phosphorylation during vegetative growth","termid":"FYPO:0004080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008158"}


id: PR:P53692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19306:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.06","secondary_identifiers":["UniProtKB:P53692"],"synonyms":[{"name":"DNA repair protein rad18 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC5E4.06","type":"related"},{"name":"Spom972h-SMC6","type":"exact"},{"name":"rad18","type":"related"}],"termid":"PR:P53692"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: GO:0044438
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microbody, a cytoplasmic organelle, spherical or oval in shape, that is bounded by a single membrane and contains oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microbody part (obsolete GO:0044438)","termid":"GO:0044438"}


id: PBO:0048799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAS complex locus","termid":"PBO:0048799"}


id: PBO:0073894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A9 antisense RNA 1","termid":"PBO:0073894"}


id: GO:0033042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble umami compounds to initiate a change in cell activity. These receptors are responsible for the sense of umami taste, the savory taste of meats and other foods that are rich in glutamates.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPCR taste receptor activity","termid":"GO:0090681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"umami taste receptor activity","termid":"GO:0033042"}


id: PATO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000675 body temperature value (obsolete PATO:0000675)","termid":"PATO:0000675"}


id: PBO:0051101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-8","termid":"PBO:0051101"}


id: GO:0106438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction :(L-glutamyl)n-L-gamma-glutamyl-L-glutamyl-[protein] + ATP + L-glutamate = (L-glutamyl)n+1-L-gamma-glutamyl-L-glutamyl-[protein] + ADP + H+ + phosphate.","definition_xrefs":["Rhea:60148","PMID:32747782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, elongating","termid":"GO:0106438"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: PBO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B","termid":"PBO:0043032"}


id: PBO:0069842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1128, pseudogene","termid":"PBO:0069842"}


id: GO:0140897
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104643],"is_not":false,"summary":null,"term":"GO:0140897"}]},"cv_name":"molecular_function","definition":"Combining with a mechanical force and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.","definition_xrefs":["PMID:34666001","PMID:23907979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mechanoreceptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140897","terms_by_termid":{"GO:0140897":null}}


id: GO:0021884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron development","termid":"GO:0021954"},{"relation_name":"part_of","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuron development","termid":"GO:0021884"}


id: PBO:0065139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKX pseudogene 2","termid":"PBO:0065139"}


id: PBO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_non-growing_cell_tip","termid":"PBO:0034683"}


id: PBO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity","termid":"PBO:0030328"}


id: PBO:0073823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A2 intronic transcript 1","termid":"PBO:0073823"}


id: PBO:0028052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology","termid":"PBO:0028052"}


id: PBO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_nitrogen_starvation","termid":"PBO:0035776"}


id: GO:1900445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"}],"termid":"GO:1900445"}


id: PBO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 63","termid":"PBO:0042766"}


id: PBO:0051244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-65-1 (pseudogene)","termid":"PBO:0051244"}


id: PBO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase (predicted)","termid":"PBO:0000141"}


id: GO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of the chromophore S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["RESID:AA0207"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine (obsolete GO:0018097)","synonyms":[{"name":"protein amino acid cinnamylation","type":"broad"}],"termid":"GO:0018097"}


id: GO:1904319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction involved in micturition.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18562635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction involved in micturition","termid":"GO:1904318"},{"relation_name":"negatively_regulates","term_name":"smooth muscle contraction involved in micturition","termid":"GO:0060083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle contraction involved in micturition","synonyms":[{"name":"down regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"down regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"down regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"down-regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"down-regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"down-regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"downregulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"downregulation of smooth muscle contraction involved in urination","type":"related"},{"name":"downregulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"inhibition of smooth muscle contraction involved in micturition","type":"narrow"},{"name":"inhibition of smooth muscle contraction involved in urination","type":"related"},{"name":"inhibition of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"negative regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"negative regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"}],"termid":"GO:1904319"}


id: GO:0002893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of type II hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"negatively_regulates","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type II hypersensitivity","synonyms":[{"name":"down regulation of type II hypersensitivity","type":"exact"},{"name":"down-regulation of type II hypersensitivity","type":"exact"},{"name":"downregulation of type II hypersensitivity","type":"exact"},{"name":"inhibition of type II hypersensitivity","type":"narrow"}],"termid":"GO:0002893"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87410],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: GO:0060373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in a ventricular cardiomyocyte.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell membrane depolarization","synonyms":[{"name":"electrocardiogram QRS complex","type":"related"},{"name":"regulation of ventricular cardiomyocyte membrane depolarization","type":"exact"},{"name":"ventricular depolarization","type":"related"}],"termid":"GO:0060373"}


id: PBO:0081155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein like 1","termid":"PBO:0081155"}


id: PBO:0040210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 3","termid":"PBO:0040210"}


id: PBO:0083792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the inner mitochondrial membrane; peripherally localized; component of the TIM22 complex, which is a twin-pore translocase that mediates insertion of numerous multispanning inner membrane proteins","termid":"PBO:0083792"}


id: PBO:0051510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit gamma pseudogene 1","termid":"PBO:0051510"}


id: GO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of a telium, which is a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telium development","termid":"GO:0075275"}


id: GO:0071379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"}


id: PBO:0051760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 5 pseudogene 1","termid":"PBO:0051760"}


id: GO:0010796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a multivesicular body, a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles.","definition_xrefs":["GOC:jp","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endosome size","termid":"GO:0051036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of multivesicular body size","termid":"GO:0010796"}


id: PBO:0044111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 70","termid":"PBO:0044111"}


id: PBO:0026670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_phase_transition","termid":"PBO:0026670"}


id: GO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-1. DIF-1 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP by DIF-1","termid":"GO:0061120"}


id: PBO:0089979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal conserved protein YML020W protein ortholog, PTHR47349 family","termid":"PBO:0089979"}


id: GO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha6 subunit and one beta4 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alpha6-beta4 complex","synonyms":[{"name":"ITGA6-ITGB4 complex","type":"narrow"},{"name":"alpha6-beta4 integrin complex","type":"exact"}],"termid":"GO:0034676"}


id: PBO:0090660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex large subunit","termid":"PBO:0090660"}


id: PBO:0072826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival associated mitochondrial melanoma specific oncogenic non-coding RNA","termid":"PBO:0072826"}


id: PBO:0051614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 receptor antagonist","termid":"PBO:0051614"}


id: PBO:0085022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinic acid mononucleotide adenylyltransferase; catalyzes the transfer of the adenylyl moiety of ATP to nicotinamide mononucleotide to form NAD; involved in pathways of NAD biosynthesis, including the de novo, NAD(+) salvage, and nicotinamide riboside salvage pathways; homolog of human NMNAT; NMA1 has a paralog, NMA2, that arose from the whole genome duplication","termid":"PBO:0085022"}


id: GO:1900143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell apoptotic process","termid":"GO:0034352"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte apoptotic process","termid":"GO:1900141"},{"relation_name":"positively_regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"activation of oligodendrocyte apoptosis","type":"narrow"},{"name":"activation of oligodendrocyte apoptotic process","type":"narrow"},{"name":"positive regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"up-regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"up-regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"upregulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"upregulation of oligodendrocyte apoptotic process","type":"exact"}],"termid":"GO:1900143"}


id: PBO:0028162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP_binding","termid":"PBO:0028162"}


id: MOD:00243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-cysteine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8183941","PubMed:8895467","RESID:AA0238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine oxazole-4-carboxylic acid","synonyms":[{"name":"2-(1-azanyl-2-sulfanylethyl)-4-oxazolecarboxylic acid","type":"exact"},{"name":"2-[(1R)-1-amino-2-sulfanylethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Cys-Ser)","type":"exact"},{"name":"L-cysteine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00243"}


id: PBO:0070138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 52 pseudogene","termid":"PBO:0070138"}


id: GO:0009658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast organization","synonyms":[{"name":"chloroplast organisation","type":"exact"},{"name":"chloroplast organization and biogenesis","type":"related"}],"termid":"GO:0009658"}


id: PBO:0110369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 signaling adaptor L3","termid":"PBO:0110369"}


id: PBO:0014304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial guanine nucleotide transporter Gcs1 (predicted)","termid":"PBO:0014304"}


id: PBO:0005189
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds 5'-TA[AG]GCAGNTN[CT]AACG[AC]G-3'","termid":"PBO:0005189"}


id: GO:0033013
data:
  {"annotated_genes":["SJAG_02896","SJAG_00366","SJAG_01841","SJAG_01192","SJAG_00699","SJAG_03173","SJAG_03961","SJAG_04944","SJAG_02876","SJAG_04109","SJAG_01155","SJAG_03862","SJAG_00097","SJAG_01786","SJAG_01372","SJAG_04397","SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108072],"is_not":false,"summary":null,"term":"GO:0033013"},{"annotations":[105732,89388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[91977,101367,112818,110071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[102786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[91978,88548,89049,87186,90634,92570,113154,66654],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[111606,93994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[92571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrapyrrole metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole metabolism","type":"exact"}],"termid":"GO:0033013","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0033013":null,"GO:0042167":null}}


id: GO:1904435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transferrin receptor binding.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:18353247","GOC:kom","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transferrin receptor binding","termid":"GO:1904435"}


id: PBO:0059249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L18","termid":"PBO:0059249"}


id: PBO:0045055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2 like","termid":"PBO:0045055"}


id: GO:1901226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of transcription from RNA polymerase II promoter involved in heart development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901226)","synonyms":[{"name":"activation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"activation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"activation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"activation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"activation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"activation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"activation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"activation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"activation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"activation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"activation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"narrow"},{"name":"activation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"activation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"activation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"positive regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"positive regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"positive regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"positive regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"positive regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"positive regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"positive regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"positive regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"up regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"up regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"up regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"up regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"up regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"up regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"up-regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up-regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"up-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"up-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"up-regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up-regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"up-regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up-regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"upregulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"upregulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"upregulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"upregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"upregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"upregulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"upregulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"upregulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"upregulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901226"}


id: GO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sorocarp stalk cell, any of the cellulose-covered cells that form the stalk of a sorocarp. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["PMID:4338436","ISBN:0521583640","GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"sorocarp stalk development","termid":"GO:0031150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk cell differentiation","synonyms":[{"name":"stalk cell differentiation","type":"exact"}],"termid":"GO:0031149"}


id: PBO:0073318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 1","termid":"PBO:0073318"}


id: PBO:0027808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5720","termid":"PBO:0027808"}


id: PBO:0030029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenylyl_cyclase_activity","termid":"PBO:0030029"}


id: GO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of B cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell proliferation","termid":"GO:0030888"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte proliferation","termid":"GO:0050671"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"positively_regulates","term_name":"B cell proliferation","termid":"GO:0042100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell proliferation","synonyms":[{"name":"activation of B cell proliferation","type":"narrow"},{"name":"positive regulation of B lymphocyte proliferation","type":"exact"},{"name":"positive regulation of B-cell proliferation","type":"exact"},{"name":"positive regulation of B-lymphocyte proliferation","type":"exact"},{"name":"stimulation of B cell proliferation","type":"narrow"},{"name":"up regulation of B cell proliferation","type":"exact"},{"name":"up-regulation of B cell proliferation","type":"exact"},{"name":"upregulation of B cell proliferation","type":"exact"}],"termid":"GO:0030890"}


id: GO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045714)","synonyms":[{"name":"regulation of LDLr biosynthesis","type":"exact"},{"name":"regulation of LDLr biosynthetic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"regulation of low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045714"}


id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: PBO:0080927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 5","termid":"PBO:0080927"}


id: PBO:0076829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEPSIN adaptor related protein complex 4 accessory protein","termid":"PBO:0076829"}


id: PBO:0071333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 10","termid":"PBO:0071333"}


id: SO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Isowyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isowyosine","secondary_identifiers":["RNAMOD:101"],"synonyms":[{"name":"imG2","type":"exact"}],"termid":"SO:0001342"}


id: FYPO:0006249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0006418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal tRNA aminoacylation","synonyms":[{"name":"normal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"normal tRNA aminoacylation for protein translation","type":"exact"}],"termid":"FYPO:0006249"}


id: PBO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocilin","termid":"PBO:0060355"}


id: PBO:0078851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC5 opposite strand","termid":"PBO:0078851"}


id: PBO:0046109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E family member 2","termid":"PBO:0046109"}


id: GO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins following the induction of and contributing to an immune response.","definition_xrefs":["PMID:11205333","GOC:add","ISBN:0781735149","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic hypermutation of immunoglobulin genes","termid":"GO:0016446"},{"relation_name":"part_of","term_name":"B cell affinity maturation","termid":"GO:0002344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic hypermutation of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic hypermutation of antibody genes during immune response","type":"related"},{"name":"somatic hypermutation of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002205"}


id: PBO:0056840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member E, pseudogene","termid":"PBO:0056840"}


id: PBO:0031111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_reactive_oxygen_species_during_G0_phase","termid":"PBO:0031111"}


id: GO:1902277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"},{"relation_name":"negatively_regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic amylase secretion","synonyms":[{"name":"down regulation of pancreatic amylase secretion","type":"exact"},{"name":"down-regulation of pancreatic amylase secretion","type":"exact"},{"name":"downregulation of pancreatic amylase secretion","type":"exact"},{"name":"inhibition of pancreatic amylase secretion","type":"narrow"}],"termid":"GO:1902277"}


id: PBO:0080483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 3A","termid":"PBO:0080483"}


id: PBO:0076321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptoporin","termid":"PBO:0076321"}


id: PBO:0043971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 1","termid":"PBO:0043971"}


id: PBO:0069287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 543, pseudogene","termid":"PBO:0069287"}


id: FYPO:0004579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from transposable element transcripts measured in a cell normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal transposable element-derived small RNA level","synonyms":[{"name":"normal transposable element-derived small RNA accumulation","type":"related"},{"name":"normal transposable element-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"normal transposable element-derived small RNA level during vegetative growth","type":"exact"},{"name":"normal transposable element-derived small RNA transcript level","type":"exact"}],"termid":"FYPO:0004579"}


id: GO:0097229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.","definition_xrefs":["MP:0009837","GOC:cjm","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm end piece","termid":"GO:0097229"}


id: GO:0030094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the plasma membrane-derived thylakoid. The photosystem functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin. Examples of this complex are found in bacterial species.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem I","termid":"GO:0009522"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plasma membrane-derived photosystem I","synonyms":[{"name":"plasma membrane photosystem I","type":"exact"}],"termid":"GO:0030094"}


id: PBO:0075542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E22, pseudogene","termid":"PBO:0075542"}


id: PBO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor B","termid":"PBO:0001446"}


id: SO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where there is no resulting change to the encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://en.wikipedia.org/wiki/Silent_mutation","SO:0001588","http://en.wikipedia.org/wiki/Synonymous_mutation"],"synonyms":[{"name":"ANNOVAR:synonymous SNV","type":"related"},{"name":"Jannovar:synonymous_variant","type":"exact"},{"name":"Seattleseq:synonymous","type":"exact"},{"name":"Seattleseq:synonymous-near-splice","type":"related"},{"name":"VAAST:synonymous_codon","type":"exact"},{"name":"VAAST:synonymous_variant","type":"exact"},{"name":"VAT:synonymous","type":"exact"},{"name":"VEP:synonymous_variant","type":"exact"},{"name":"coding-synon","type":"exact"},{"name":"silent mutation","type":"related"},{"name":"silent substitution","type":"related"},{"name":"silent_mutation","type":"related"},{"name":"snpEff:SYNONYMOUS_CODING","type":"exact"},{"name":"synonymous codon","type":"exact"},{"name":"synonymous_coding","type":"exact"},{"name":"synonymous_codon","type":"exact"}],"termid":"SO:0001819"}


id: GO:0097653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the intracellular environment and the plasma membrane; it excludes any external encapsulating structures.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unencapsulated part of cell","synonyms":[{"name":"non-encapsulated part of cell","type":"exact"}],"termid":"GO:0097653"}


id: GO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an enzyme.","definition_xrefs":["GOC:ebc","GOC:tb","GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalytic activity","secondary_identifiers":["GO:0048554"],"synonyms":[{"name":"activation of enzyme activity","type":"narrow"},{"name":"activation of metalloenzyme activity","type":"narrow"},{"name":"positive regulation of enzyme activity","type":"exact"},{"name":"positive regulation of metalloenzyme activity","type":"narrow"},{"name":"stimulation of enzyme activity","type":"narrow"},{"name":"stimulation of metalloenzyme activity","type":"narrow"},{"name":"up regulation of enzyme activity","type":"exact"},{"name":"up regulation of metalloenzyme activity","type":"narrow"},{"name":"up-regulation of enzyme activity","type":"exact"},{"name":"up-regulation of metalloenzyme activity","type":"narrow"},{"name":"upregulation of enzyme activity","type":"exact"},{"name":"upregulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043085"}


id: PBO:0085211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding phosphatidylserine transferase; part of family with seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; OSH7 has a paralog, OSH6, that arose from the whole genome duplication","termid":"PBO:0085211"}


id: PBO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 1","termid":"PBO:0043435"}


id: GO:1904008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:20704590"],"gene_count":0,"genotype_count":0,"name":"obsolete response to monosodium glutamate (obsolete GO:1904008)","termid":"GO:1904008"}


id: PBO:0043387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 1","termid":"PBO:0043387"}


id: PBO:0056848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mahogunin ring finger 1","termid":"PBO:0056848"}


id: PBO:0046492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ERG","termid":"PBO:0046492"}


id: PBO:0036221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arginase_activity","termid":"PBO:0036221"}


id: GO:0110098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium import into the mitochondrion.","definition_xrefs":["GOC:sl","PMID:24085037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium import into the mitochondrion","termid":"GO:0110097"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"calcium import into the mitochondrion","termid":"GO:0036444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of calcium import into the mitochondrion","termid":"GO:0110098"}


id: PBO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 42","termid":"PBO:0044355"}


id: PBO:0029871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_methylation","termid":"PBO:0029871"}


id: FYPO:0004646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of anaphase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of mitotic anaphase","synonyms":[{"name":"normal duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"normal duration of anaphase of mitosis","type":"related"},{"name":"normal duration of mitotic anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004646"}


id: GO:0070487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one monocyte to one or more other monocytes via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte aggregation","termid":"GO:0070486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"monocyte aggregation","synonyms":[{"name":"mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:0070487"}


id: GO:2000873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000873)","synonyms":[{"name":"regulation of histone H4 acetylation involved in DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to DNA damage","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to genotoxic stress","type":"exact"}],"termid":"GO:2000873"}


id: PBO:0040334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 2","termid":"PBO:0040334"}


id: PR:O59734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11021:SF0","OMA:SCHPO03376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.14","secondary_identifiers":["UniProtKB:O59734"],"synonyms":[{"name":"Sm protein F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPF","type":"exact"},{"name":"snRNP-F (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59734"}


id: GO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclodiene stimulus. A cyclodiene is any organic insecticide (as dieldrin or chlordane) with a chlorinated methylene group forming a bridge across a 6-membered carbon ring.","definition_xrefs":["ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclodiene","synonyms":[{"name":"cyclodiene resistance","type":"related"},{"name":"cyclodiene susceptibility/resistance","type":"related"}],"termid":"GO:0046682"}


id: SO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000251 eight_cutter_restriction_site (obsolete SO:0000251)","synonyms":[{"name":"8-cutter_restriction_site","type":"related"},{"name":"eight-cutter_restriction_site","type":"related"}],"termid":"SO:0000251"}


id: GO:0060927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to pacemaker cell fates and their capacity to differentiate into pacemaker cells. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell fate commitment","synonyms":[{"name":"pacemaker cell fate commitment","type":"broad"}],"termid":"GO:0060927"}


id: PATO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in a population of multiple sexes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"population quality","termid":"PATO:0002003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed sex","termid":"PATO:0001338"}


id: GO:0043046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine that contributes to the establishment of DNA methylation patterns in the gamete.","definition_xrefs":["GOC:go_curators","PMID:12138111"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation involved in gamete generation (obsolete GO:0043046)","synonyms":[{"name":"de novo DNA methylation","type":"related"}],"termid":"GO:0043046"}


id: GO:1990049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body.","definition_xrefs":["PMID:23358451","PMID:24762653","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"dense core granule cytoskeletal transport","termid":"GO:0099519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"retrograde neuronal dense core vesicle transport","synonyms":[{"name":"retrograde dense core granule trafficking","type":"exact"},{"name":"retrograde dense core granule transport","type":"exact"}],"termid":"GO:1990049"}


id: GO:0032357
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91066],"is_not":false,"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized purine residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized DNA binding","termid":"GO:0032356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oxidized purine DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidised purine DNA binding","type":"exact"},{"name":"oxidized purine base DNA binding","type":"exact"},{"name":"oxidized purine nucleobase DNA binding","type":"exact"}],"termid":"GO:0032357","terms_by_termid":{"GO:0032357":null}}


id: PBO:0059347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12","termid":"PBO:0059347"}


id: GO:0052222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052222)","synonyms":[{"name":"negative aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052222"}


id: GO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth of cardiac muscle tissue that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"is_a","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"},{"relation_name":"part_of","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue growth involved in heart morphogenesis","termid":"GO:0003245"}


id: PBO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 2","termid":"PBO:0045580"}


id: PBO:0071592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 9","termid":"PBO:0071592"}


id: FYPO:0007579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in the medial membrane band is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0032178","PomBase:mah","PMID:15517003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal plasma membrane sterol distribution","termid":"FYPO:0004963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal medial membrane band sterol distribution","synonyms":[{"name":"normal medial membrane band sterol distribution during mitotic cell cycle","type":"related"},{"name":"normal medial membrane band sterol distribution during vegetative growth","type":"exact"},{"name":"normal medial membrane domain sterol distribution","type":"exact"}],"termid":"FYPO:0007579"}


id: GO:1900830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of D-tyrosine.","definition_xrefs":["GOC:TermGenie","PMID:10766779"],"gene_count":0,"genotype_count":0,"name":"obsolete D-tyrosine biosynthetic process (obsolete GO:1900830)","synonyms":[{"name":"D-tyrosine anabolism","type":"exact"},{"name":"D-tyrosine biosynthesis","type":"exact"},{"name":"D-tyrosine formation","type":"exact"},{"name":"D-tyrosine synthesis","type":"exact"}],"termid":"GO:1900830"}


id: PBO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20C golgi associated secretory pathway kinase","termid":"PBO:0046897"}


id: PBO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 36","termid":"PBO:0071738"}


id: SO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small nucleolar RNA of the box C/D family.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_primary_transcript","synonyms":[{"name":"C/D box snoRNA primary transcript","type":"exact"}],"termid":"SO:0000595"}


id: PR:000050519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the scr1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein scr1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1D7.02c","termid":"PR:000050519"}


id: PBO:0049625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 28","termid":"PBO:0049625"}


id: PBO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu32","termid":"PBO:0001077"}


id: PBO:0065742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal testis enriched protein 1","termid":"PBO:0065742"}


id: PBO:0057613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1179","termid":"PBO:0057613"}


id: GO:0006301
data:
  {"annotated_genes":["SJAG_01044","SJAG_00153","SJAG_02521","SJAG_00819","SJAG_04791","SJAG_01221","SJAG_04089","SJAG_02918","SJAG_16460","SJAG_04816","SJAG_00573","SJAG_00406","SJAG_03898","SJAG_00611","SJAG_00208","SJAG_03906","SJAG_04190","SJAG_02667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84262,84879,92217,94446,100415,100604,101137,112963,113270],"is_not":false,"summary":null,"term":"GO:0006301"},{"annotations":[95490,99062,100171,100410,113478,99082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[92078,95491,113479,100411,100172,99083,99063,109763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[107954],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[100176,113480,94508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00208":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00819":null,"SJAG_01044":null,"SJAG_01221":null,"SJAG_02521":null,"SJAG_02667":null,"SJAG_02918":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"postreplication repair","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Postreplication_repair"],"synonyms":[{"name":"postreplication DNA repair","type":"exact"}],"termid":"GO:0006301","terms_by_termid":{"GO:0006301":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904332":null}}


id: GO:0099558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that preserves the structural organistation and orientation of a synaptic cellular component such as the synaptic cytoskeleton and molecular scaffolds.","definition_xrefs":["PMID:24449494","PMID:25611509","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of synapse structure","synonyms":[{"name":"synaptic maintenance","type":"exact"}],"termid":"GO:0099558"}


id: PBO:0067163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 216, pseudogene","termid":"PBO:0067163"}


id: PBO:0027936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_glycerol_carbon_source","termid":"PBO:0027936"}


id: PBO:0073650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of IKBKE 1","termid":"PBO:0073650"}


id: PBO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9 (predicted)","termid":"PBO:0003886"}


id: PBO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Isp3","termid":"PBO:0016883"}


id: MOD:00852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}


id: PBO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Baller-Gerold syndrome","termid":"PBO:0011108"}


id: GO:0071217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"is_a","term_name":"cellular response to external stimulus","termid":"GO:0071496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to external biotic stimulus","termid":"GO:0071217"}


id: PBO:0061133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 1","termid":"PBO:0061133"}


id: PBO:0073416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 22","termid":"PBO:0073416"}


id: PBO:0002950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp104","termid":"PBO:0002950"}


id: PBO:0039794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAP1 antisense RNA 1","termid":"PBO:0039794"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: PBO:0057582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 887","termid":"PBO:0057582"}


id: PBO:0058643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6772","termid":"PBO:0058643"}


id: PBO:0080568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 3","termid":"PBO:0080568"}


id: FYPO:0001560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular threonine level","secondary_identifiers":["FYPO:0001614"],"synonyms":[{"name":"decreased cellular L-threonine level","type":"exact"},{"name":"decreased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular threonine level during vegetative growth","type":"exact"},{"name":"decreased level of threonine in cell","type":"exact"},{"name":"decreased threonine accumulation","type":"related"},{"name":"reduced cellular threonine level","type":"exact"},{"name":"reduced level of threonine in cell","type":"exact"}],"termid":"FYPO:0001560"}


id: PBO:0058149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4444-2","termid":"PBO:0058149"}


id: PBO:0090796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER flavin-containing N,N-dimethylaniline monooxygenase activity Fmo1","termid":"PBO:0090796"}


id: PBO:0046957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 78 member B","termid":"PBO:0046957"}


id: GO:2000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of sphingomyelin catabolic process","synonyms":[{"name":"regulation of sphingomyelin breakdown","type":"exact"},{"name":"regulation of sphingomyelin catabolism","type":"exact"},{"name":"regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000754"}


id: PBO:0049599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 2","termid":"PBO:0049599"}


id: PBO:0050373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 76","termid":"PBO:0050373"}


id: PBO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pop-Interacting Protein","termid":"PBO:0001043"}


id: GO:0000388
data:
  {"annotated_genes":["SJAG_02295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96811],"is_not":false,"summary":null,"term":"GO:0000388"}]},"cv_name":"biological_process","definition":"Rearrangement of the pre-catalytic spliceosome containing U4 (or U4atac) and U1 (or U11) snRNPs to unpair U4 (or U4atac) from U6 (or U6atac) and release it from the spliceosomal complex along with U1 (or U11).","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000397","GO:0000396"],"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"U12-type spliceosome conformational change to release U4atac and U11","type":"narrow"},{"name":"U2-type spliceosome conformational change to release U4 and U1","type":"narrow"},{"name":"spliceosomal A1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A1 complex formation","type":"narrow"},{"name":"spliceosomal B2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal B2 complex formation","type":"narrow"}],"termid":"GO:0000388","terms_by_termid":{"GO:0000388":null}}


id: GO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate.","definition_xrefs":["MetaCyc:2.7.1.152-RXN","RHEA:12793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol hexakisphosphate 5-kinase activity","secondary_identifiers":["EC:2.7.4.21","KEGG_REACTION:R09087"],"synonyms":[{"name":"ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity","type":"exact"}],"termid":"GO:0000832"}


id: PBO:0064028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 62","termid":"PBO:0064028"}


id: PATO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being abnormally developed, usually due to malnutrition.","definition_xrefs":["Wiikipedia:Wiikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic","synonyms":[{"name":"dystrophied","type":"exact"},{"name":"dystrophy","type":"related"}],"termid":"PATO:0001780"}


id: FYPO:0000318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable, some cells may divide, and some cells are longer than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including long cells (obsolete FYPO:0000318)","synonyms":[{"name":"inviable microcolony including long cells","type":"exact"},{"name":"inviable mixed population including long vegetative cells","type":"exact"},{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0000318"}


id: GO:0097536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the thymus epithelium is generated and organized.","definition_xrefs":["PMID:22342843","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"thymus development","termid":"GO:0048538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus epithelium morphogenesis","synonyms":[{"name":"thymic epithelium morphogenesis","type":"exact"}],"termid":"GO:0097536"}


id: GO:1901924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sclerotium development.","definition_xrefs":["GOC:TermGenie","PMID:21148914","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of sclerotium development","termid":"GO:1901922"},{"relation_name":"positively_regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerotium development","synonyms":[{"name":"activation of sclerotium development","type":"narrow"},{"name":"up regulation of sclerotium development","type":"exact"},{"name":"up-regulation of sclerotium development","type":"exact"},{"name":"upregulation of sclerotium development","type":"exact"}],"termid":"GO:1901924"}


id: GO:0072695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination within the telomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA recombination at telomere","synonyms":[{"name":"regulation of telomeric recombination","type":"exact"}],"termid":"GO:0072695"}


id: PBO:0051799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 1","termid":"PBO:0051799"}


id: PBO:0049316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 4","termid":"PBO:0049316"}


id: PBO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn3 (predicted)","termid":"PBO:0000704"}


id: GO:0048857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural nucleus development","termid":"GO:0048857"}


id: PBO:0088815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex subunit, human LAMTOR4 ortholog","termid":"PBO:0088815"}


id: PR:P36611
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator hap3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.08","synonyms":[{"name":"Spom972h-php3","type":"exact"}],"termid":"PR:P36611"}


id: GO:0032935
data:
  {"annotated_genes":["SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111086],"is_not":false,"summary":null,"term":"GO:0032935"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of a sterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid sensor activity","termid":"GO:0106254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03715":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"sterol sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sterol sensing activity","type":"exact"},{"name":"sterol-sensing domain","type":"narrow"}],"termid":"GO:0032935","terms_by_termid":{"GO:0032935":null}}


id: PBO:0074690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 69","termid":"PBO:0074690"}


id: PBO:0004036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0004036"}


id: PBO:0029637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus","termid":"PBO:0029637"}


id: PR:O94267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SPT16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03804","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit spt16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.19","secondary_identifiers":["UniProtKB:O94267"],"synonyms":[{"name":"Spom972h-SUPT16H","type":"exact"},{"name":"facilitates chromatin transcription complex subunit spt16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94267"}


id: MOD:01924
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-octanoyl-L-cysteine.","definition_xrefs":["PubMed:16342964","RESID:AA0584","PubMed:12591875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoylated residue","termid":"MOD:00666"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-octanoyl-L-cysteine","synonyms":[{"name":"(2S)-2-amino-3-(octanoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(octanoylthio)propanoic acid","type":"exact"},{"name":"ACT_SITE Acyl-thioester intermediate","type":"exact"},{"name":"S-octanoyl-L-cysteine","type":"exact"},{"name":"cysteine octanoate thioester","type":"exact"}],"termid":"MOD:01924"}


id: GO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin cell projection that contains F-actin and tubulin, with microtubules centrally located and F-actin peripherally located.","definition_xrefs":["PMID:11526084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell hair","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"imaginal disc-derived wing hair","type":"narrow"},{"name":"non-sensory hair","type":"exact"}],"termid":"GO:0070451"}


id: PBO:0015233
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer","termid":"PBO:0015233"}


id: GO:0019356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinate nucleotide from other compounds, including tryptophan.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"nicotinate nucleotide biosynthetic process from tryptophan","synonyms":[{"name":"nicotinate nucleotide anabolism from tryptophan","type":"exact"},{"name":"nicotinate nucleotide formation from tryptophan","type":"exact"},{"name":"nicotinate nucleotide synthesis from tryptophan","type":"exact"}],"termid":"GO:0019356"}


id: PBO:0075643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 2","termid":"PBO:0075643"}


id: GO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural fold is formed. The edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold formation","synonyms":[{"name":"neural groove formation","type":"related"}],"termid":"GO:0001842"}


id: PBO:0045687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 7","termid":"PBO:0045687"}


id: FYPO:0001941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cerulenin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to cerulenin","synonyms":[{"name":"resistance to cerulenin during mitotic cell cycle","type":"related"},{"name":"resistance to cerulenin during vegetative growth","type":"exact"},{"name":"resistant to cerulenin","type":"exact"}],"termid":"FYPO:0001941"}


id: PBO:0016899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule binding protein Mcp1","termid":"PBO:0016899"}


id: PBO:0040267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 2","termid":"PBO:0040267"}


id: PBO:0034491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_number_of_Rad52_foci_during_cellular_response_to_bleomycin","termid":"PBO:0034491"}


id: PBO:0112000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0112000"}


id: PBO:0053036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE1 antisense RNA 1","termid":"PBO:0053036"}


id: GO:1901522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in cellular response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22840777"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus (obsolete GO:1901522)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"}],"termid":"GO:1901522"}


id: GO:0044118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host cell (obsolete GO:0044118)","termid":"GO:0044118"}


id: PBO:0074157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F1","termid":"PBO:0074157"}


id: PBO:0004809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase Met6","termid":"PBO:0004809"}


id: PATO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality which inheres in a molecular entity when the molecular entity does not possess an electrical dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarity","termid":"PATO:0002186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonpolar polarity","termid":"PATO:0002188"}


id: PBO:0075685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S1 RNA binding domain 1","termid":"PBO:0075685"}


id: PBO:0064323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 5","termid":"PBO:0064323"}


id: GO:0090305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleic acid phosphodiester bond hydrolysis (obsolete GO:0090305)","synonyms":[{"name":"nucleic acid cleavage","type":"exact"}],"termid":"GO:0090305"}


id: PBO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase (predicted)","termid":"PBO:0002983"}


id: GO:0034824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellyl-CoA + NAD+ = cis-geranyl-CoA + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"citronellyl-CoA dehydrogenase activity","termid":"GO:0034824"}


id: PBO:0084358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-zipper transcriptional activator; responsible for regulation of sulfur amino acid pathway; requires different combinations of auxiliary factors Cbf1p, Met28p, Met31p and Met32p; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; can be ubiquitinated by ubiquitin ligase SCF-Met30p, is either degraded or maintained in an inactive state; regulates degradation of its own DNA-binding cofactors by targeting them to SCF-Met30p","termid":"PBO:0084358"}


id: PBO:0031179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe","termid":"PBO:0031179"}


id: PBO:0081420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 276","termid":"PBO:0081420"}


id: PBO:0054261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1646","termid":"PBO:0054261"}


id: PBO:0087278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3-domain protein located in the bud neck and cytokinetic actin ring; relocalizes from bud neck to nucleus upon DNA replication stress; activates the chitin synthase activity of Chs2p during cytokinesis; suppressor of growth and cytokinesis defects of chs2 phospho-mutants","termid":"PBO:0087278"}


id: SO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is trans-spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"spliced_leader_RNA","termid":"SO:0000636"},{"relation_name":"has_quality","term_name":"trans_spliced","termid":"SO:0000870"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"trans_spliced_transcript","termid":"SO:0000479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_mRNA","synonyms":[{"name":"trans-spliced mRNA","type":"exact"}],"termid":"SO:0000872"}


id: GO:0035630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition of hydroxyapatite, involved in the progression of the skeleton from its formation to its mature state.","definition_xrefs":["GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone mineralization","termid":"GO:0030282"},{"relation_name":"part_of","term_name":"ossification involved in bone maturation","termid":"GO:0043931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}


id: PBO:0041856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 3 pseudogene 1","termid":"PBO:0041856"}


id: PBO:0034623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow","termid":"PBO:0034623"}


id: GO:1901185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"negatively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERBB signaling pathway","synonyms":[{"name":"down regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down regulation of EGFR family signaling pathway","type":"related"},{"name":"down regulation of ERBB signaling pathway","type":"exact"},{"name":"down regulation of ERBB signalling pathway","type":"exact"},{"name":"down regulation of ErbB signaling","type":"exact"},{"name":"down-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down-regulation of EGFR family signaling pathway","type":"related"},{"name":"down-regulation of ERBB signaling pathway","type":"exact"},{"name":"down-regulation of ERBB signalling pathway","type":"exact"},{"name":"down-regulation of ErbB signaling","type":"exact"},{"name":"downregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"downregulation of EGFR family signaling pathway","type":"related"},{"name":"downregulation of ERBB signaling pathway","type":"exact"},{"name":"downregulation of ERBB signalling pathway","type":"exact"},{"name":"downregulation of ErbB signaling","type":"exact"},{"name":"inhibition of EGF receptor family signaling pathway","type":"exact"},{"name":"inhibition of EGFR family signaling pathway","type":"related"},{"name":"inhibition of ERBB signaling pathway","type":"narrow"},{"name":"inhibition of ERBB signalling pathway","type":"exact"},{"name":"inhibition of ErbB signaling","type":"exact"},{"name":"negative regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"negative regulation of EGFR family signaling pathway","type":"related"},{"name":"negative regulation of ERBB signalling pathway","type":"exact"},{"name":"negative regulation of ErbB signaling","type":"exact"}],"termid":"GO:1901185"}


id: PBO:0085566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase of the endoplasmic reticulum lumen; EUG1 has a paralog, PDI1, that arose from the whole genome duplication; function overlaps with that of Pdi1p; may interact with nascent polypeptides in the ER","termid":"PBO:0085566"}


id: PBO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 3","termid":"PBO:0047687"}


id: GO:0002761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"}


id: PBO:0087721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA and SAGA-like transcriptional regulatory complexes; interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087721"}


id: PBO:0087606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; involved in histone acylation; null mutant lethality is complemented by human homolog DCAKD and by E. coli coaE (encoding DPCK); detected in purified mitochondria in high-throughput studies; also localized to lipid droplets","termid":"PBO:0087606"}


id: FYPO:0003891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PomBase:mah","PMID:11104907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intragenic meiotic recombination","synonyms":[{"name":"normal meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0003891"}


id: GO:0071756
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a pentamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pentameric IgM immunoglobulin complex","synonyms":[{"name":"pentameric IgM antibody","type":"exact"}],"termid":"GO:0071756"}


id: MOD:01578
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01578"}


id: GO:0120136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dUMP = ADP + dUDP.","definition_xrefs":["PMID:3010881","RHEA:30655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dUMP kinase activity","synonyms":[{"name":"ATP:dUMP phosphotransferase activity","type":"exact"},{"name":"dUMP-kinase activity","type":"exact"},{"name":"deoxyuridine monophosphate kinase activity","type":"exact"}],"termid":"GO:0120136"}


id: SO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of loci that can be grouped in a linear order representing the different degrees of linkage among the genes concerned.","definition_xrefs":["ISBN:038752046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linkage_group","secondary_identifiers":["http://en.wikipedia.org/wiki/Linkage_group"],"synonyms":[{"name":"linkage group","type":"exact"}],"termid":"SO:0000018"}


id: PBO:0030799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030799"}


id: PBO:0032764
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression of exogenous PCNA-binding peptide fused to EGFP causes phenotype of inviable elongated mononucleate cells","termid":"PBO:0032764"}


id: GO:0006217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxycytidine metabolic process","termid":"GO:0046092"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxycytidine catabolic process","synonyms":[{"name":"deoxycytidine breakdown","type":"exact"},{"name":"deoxycytidine catabolism","type":"exact"},{"name":"deoxycytidine degradation","type":"exact"}],"termid":"GO:0006217"}


id: PBO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DND microRNA-mediated repression inhibitor 1 pseudogene 2","termid":"PBO:0045262"}


id: GO:0050019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-xylulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.12","RHEA:16381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-arabinitol 4-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01903","MetaCyc:L-ARABINITOL-4-DEHYDROGENASE-RXN"],"termid":"GO:0050019"}


id: PBO:0081263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 1","termid":"PBO:0081263"}


id: PBO:0086061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; protein abundance increases in response to DNA replication stress; TMA10 has a paralog, STF2, that arose from the whole genome duplication","termid":"PBO:0086061"}


id: PBO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt1 (predicted)","termid":"PBO:0004912"}


id: GO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac endothelial cell differentiation","termid":"GO:0003349"}


id: PBO:0076660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 22","termid":"PBO:0076660"}


id: PATO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated orange","synonyms":[{"name":"bright orange","type":"related"}],"termid":"PATO:0001277"}


id: GO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process directed at removing immune complexes from the body. Immune complexes are clusters of antibodies bound to antigen, to which complement may also be fixed, and which may precipitate or remain in solution.","definition_xrefs":["GO_REF:0000022","ISBN:068340007X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance","termid":"GO:0002434"}


id: PBO:0086206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with ribosomes; homolog of translationally controlled tumor protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and relocates to the mitochondrial outer surface upon oxidative stress; homolog of human TPT1","termid":"PBO:0086206"}


id: PATO:0001531
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality that exists by virtue of the disposition of the cell to adhere to other cells and molecules, through the emergent action of the molecular parts of the cell surface.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"},{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular adhesivity","termid":"PATO:0001531"}


id: GO:0009176
data:
  {"annotated_genes":["SJAG_04627","SJAG_04487","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85608,104571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[95175,104572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxynucleoside monophosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009176","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: PBO:0005344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Sum3","termid":"PBO:0005344"}


id: GO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.","definition_xrefs":["UBERON:0002097","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin development","synonyms":[{"name":"animal skin development","type":"exact"}],"termid":"GO:0043588"}


id: PBO:0090956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit p30, Rpp1","termid":"PBO:0090956"}


id: PBO:0063566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PENK antisense RNA 1","termid":"PBO:0063566"}


id: GO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of polypeptides, preferably at the first bond of Xaa-Arg-Lys, and less commonly at the first bond of Arg-Arg-Xaa, in which Xaa is not Arg or Lys.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nardilysin activity (obsolete GO:0016919)","synonyms":[{"name":"N-arginine dibasic convertase activity","type":"related"},{"name":"NRD convertase activity","type":"related"},{"name":"NRD-convertase activity","type":"related"},{"name":"nardilysin activity","type":"exact"}],"termid":"GO:0016919"}


id: GO:0080143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amino acid export. Amino acid export is the directed movement of amino acids out of a cell or organelle.","definition_xrefs":["PMID:20018597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid transmembrane transport","termid":"GO:1903789"},{"relation_name":"regulates","term_name":"amino acid export across plasma membrane","termid":"GO:0032973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of amino acid export","termid":"GO:0080143"}


id: GO:1904776
data:
  {"annotated_genes":["SJAG_03602","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[94631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell cortex.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"regulates","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell cortex","type":"exact"}],"termid":"GO:1904776","terms_by_termid":{"GO:0120047":null,"GO:0140325":null}}


id: PBO:0078070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 60 (pseudogene)","termid":"PBO:0078070"}


id: PR:P42657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad25 gene.","definition_xrefs":["UniProtKB:P42657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein rad25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.13c","synonyms":[{"name":"Spom972h-rad25","type":"exact"}],"termid":"PR:P42657"}


id: PBO:0068512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 103, pseudogene","termid":"PBO:0068512"}


id: FYPO:0001976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules","termid":"FYPO:0007809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic microtubules during vegetative growth","synonyms":[{"name":"normal cytoplasmic microtubule morphology during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule structure during vegetative growth","type":"narrow"},{"name":"normal cytoplasmic microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001976"}


id: PBO:0073942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member B1","termid":"PBO:0073942"}


id: PBO:0072335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 21","termid":"PBO:0072335"}


id: GO:0015818
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106221,98987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"isoleucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transport","type":"narrow"}],"termid":"GO:0015818","terms_by_termid":{"GO:1903714":null}}


id: PBO:0040807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BicC family RNA binding protein 1","termid":"PBO:0040807"}


id: FYPO:0005525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in centromere inner repeat regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:22990236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy at centromeric heterochromatin","termid":"FYPO:0008151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at centromere inner repeat","synonyms":[{"name":"decreased nucleosome occupancy at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in centromere inner repeat","type":"exact"},{"name":"reduced nucleosome occupancy at centromere inner repeat","type":"exact"}],"termid":"FYPO:0005525"}


id: PBO:0047844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FPGT-TNNI3K readthrough","termid":"PBO:0047844"}


id: FYPO:0006264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation is decreased at the telomeric regions during anaphase B. The remainder of the sister chromatids may or may not separate normally.","definition_xrefs":["PMID:21540296","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomeric DNA separation","termid":"FYPO:0005442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"decreased telomeric DNA separation during anaphase B","synonyms":[{"name":"reduced telomeric DNA separation during anaphase B","type":"related"},{"name":"decreased DNA separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic sister chromatid separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic telomeric DNA separation during anaphase B","type":"exact"},{"name":"decreased segregation of telomeric DNA during anaphase B","type":"related"},{"name":"decreased telomere disjunction during anaphase B","type":"exact"},{"name":"decreased telomere separation during anaphase B","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B during mitotic cell cycle","type":"related"},{"name":"decreased telomeric DNA separation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B of mitosis","type":"exact"},{"name":"increased sister chromatid telomere nondisjunction at anaphase B","type":"exact"},{"name":"increased taz1 foci at anaphase B","type":"related"}],"termid":"FYPO:0006264"}


id: PBO:0052269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4C","termid":"PBO:0052269"}


id: PBO:0083831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanolamine kinase; primarily responsible for phosphatidylethanolamine synthesis via the CDP-ethanolamine pathway; exhibits some choline kinase activity, thus contributing to phosphatidylcholine synthesis via the CDP-choline pathway; EKI1 has a paralog, CKI1, that arose from the whole genome duplication","termid":"PBO:0083831"}


id: PBO:0011485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT catechol O-methyltransferase homolog 1","termid":"PBO:0011485"}


id: FYPO:0001880
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115481,115488,115492,115480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abolished protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to cell division site","type":"exact"},{"name":"abolished protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abolished protein recruitment to cell division site","type":"related"},{"name":"protein localization to cell division site abolished","type":"exact"}],"termid":"FYPO:0001880","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: GO:0052710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine breakdown","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine degradation","type":"exact"},{"name":"hercynine breakdown","type":"exact"},{"name":"hercynine catabolic process","type":"exact"},{"name":"hercynine catabolism","type":"exact"},{"name":"hercynine degradation","type":"exact"},{"name":"histidine betaine breakdown","type":"exact"},{"name":"histidine betaine catabolic process","type":"exact"},{"name":"histidine betaine catabolism","type":"exact"},{"name":"histidine betaine degradation","type":"exact"}],"termid":"GO:0052710"}


id: FYPO:0005612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope","synonyms":[{"name":"normal protein localisation to nuclear envelope","type":"exact"}],"termid":"FYPO:0005612"}


id: PBO:0082638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug2p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082638"}


id: PBO:0088579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPAC4G9.22 syntenic ortholog, no amino acid similarity (sequence or composition), possibly both are RNAs","termid":"PBO:0088579"}


id: GO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response to antigenic stimulus","synonyms":[{"name":"down regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002862"}


id: PBO:0035800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0035800"}


id: GO:0006670
data:
  {"annotated_genes":["SJAG_04178","SJAG_00880","SJAG_01057","SJAG_02706","SJAG_02305","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102166,105917,101721,88988,93102,93858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["GOC:ma","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sphingosine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"(4E)-sphing-4-enine metabolic process","type":"exact"},{"name":"(4E)-sphing-4-enine metabolism","type":"exact"},{"name":"sphing-4-enine metabolic process","type":"exact"},{"name":"sphing-4-enine metabolism","type":"exact"},{"name":"sphingosine metabolism","type":"exact"}],"termid":"GO:0006670","terms_by_termid":{"GO:0046512":null}}


id: GO:1905316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a superior endocardial cushion is generated and organized.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:17050629","GO_REF:0000083","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior endocardial cushion morphogenesis","synonyms":[{"name":"dorsal endocardial cushion morphogenesis","type":"exact"}],"termid":"GO:1905316"}


id: PBO:0050697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12A","termid":"PBO:0050697"}


id: GO:0030055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell junction that forms a connection between a cell and the extracellular matrix.","definition_xrefs":["PMID:26923917","GOC:bc","GOC:hb","PMID:16805308","PMID:1643657","PMID:8314002","GOC:mah","PMID:10419689","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anchoring junction","termid":"GO:0070161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-substrate junction","synonyms":[{"name":"cell-matrix junction","type":"exact"}],"termid":"GO:0030055"}


id: PBO:0066480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refilin A","termid":"PBO:0066480"}


id: PBO:0079580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 1","termid":"PBO:0079580"}


id: GO:1904734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of electron transfer activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25416781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of electron transfer activity","termid":"GO:1904732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of electron transfer activity","synonyms":[{"name":"activation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"activation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"activation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"activation of amicyanin","type":"narrow"},{"name":"activation of azurin","type":"narrow"},{"name":"activation of bacterial-type ferredoxin","type":"narrow"},{"name":"activation of chloroplast-type ferredoxin","type":"narrow"},{"name":"activation of copper electron carrier","type":"narrow"},{"name":"activation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of electron acceptor activity","type":"narrow"},{"name":"activation of electron carrier activity","type":"narrow"},{"name":"activation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"activation of electron donor activity","type":"narrow"},{"name":"activation of electron transfer flavoprotein","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"activation of electron transporter activity","type":"narrow"},{"name":"activation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"activation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"activation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of mononuclear iron electron carrier","type":"narrow"},{"name":"activation of polyferredoxin","type":"narrow"},{"name":"activation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"activation of rubredoxin","type":"narrow"},{"name":"activation of small blue copper electron carrier","type":"narrow"},{"name":"activation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"positive regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"positive regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"positive regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"positive regulation of amicyanin","type":"narrow"},{"name":"positive regulation of azurin","type":"narrow"},{"name":"positive regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"positive regulation of copper electron carrier","type":"narrow"},{"name":"positive regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of electron acceptor activity","type":"narrow"},{"name":"positive regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"positive regulation of electron donor activity","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"positive regulation of electron transporter activity","type":"related"},{"name":"positive regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"positive regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"positive regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"positive regulation of polyferredoxin","type":"narrow"},{"name":"positive regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"positive regulation of rubredoxin","type":"narrow"},{"name":"positive regulation of small blue copper electron carrier","type":"narrow"},{"name":"positive regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up regulation of amicyanin","type":"narrow"},{"name":"up regulation of azurin","type":"narrow"},{"name":"up regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up regulation of copper electron carrier","type":"narrow"},{"name":"up regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of electron acceptor activity","type":"narrow"},{"name":"up regulation of electron carrier activity","type":"related"},{"name":"up regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up regulation of electron donor activity","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up regulation of electron transporter activity","type":"related"},{"name":"up regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up regulation of polyferredoxin","type":"narrow"},{"name":"up regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up regulation of rubredoxin","type":"narrow"},{"name":"up regulation of small blue copper electron carrier","type":"narrow"},{"name":"up regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up-regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up-regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up-regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up-regulation of amicyanin","type":"narrow"},{"name":"up-regulation of azurin","type":"narrow"},{"name":"up-regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up-regulation of copper electron carrier","type":"narrow"},{"name":"up-regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of electron acceptor activity","type":"narrow"},{"name":"up-regulation of electron carrier activity","type":"related"},{"name":"up-regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up-regulation of electron donor activity","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up-regulation of electron transporter activity","type":"related"},{"name":"up-regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up-regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up-regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up-regulation of polyferredoxin","type":"narrow"},{"name":"up-regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up-regulation of rubredoxin","type":"narrow"},{"name":"up-regulation of small blue copper electron carrier","type":"narrow"},{"name":"up-regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"upregulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"upregulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"upregulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"upregulation of amicyanin","type":"narrow"},{"name":"upregulation of azurin","type":"narrow"},{"name":"upregulation of bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"upregulation of copper electron carrier","type":"narrow"},{"name":"upregulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of electron acceptor activity","type":"narrow"},{"name":"upregulation of electron carrier activity","type":"related"},{"name":"upregulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"upregulation of electron donor activity","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"upregulation of electron transporter activity","type":"related"},{"name":"upregulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"upregulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"upregulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of mononuclear iron electron carrier","type":"narrow"},{"name":"upregulation of polyferredoxin","type":"narrow"},{"name":"upregulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"upregulation of rubredoxin","type":"narrow"},{"name":"upregulation of small blue copper electron carrier","type":"narrow"},{"name":"upregulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904734"}


id: GO:0042297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral process whose outcome is a relatively long-lasting behavioral change whereby an organism modifies innate vocalizations to imitate sounds produced by others.","definition_xrefs":["PMID:17035521","PMID:16418265","GOC:rl","GOC:dos","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory behavior","termid":"GO:0031223"},{"relation_name":"is_a","term_name":"imitative learning","termid":"GO:0098596"},{"relation_name":"is_a","term_name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vocal learning","secondary_identifiers":["Wikipedia:Vocal_learning"],"termid":"GO:0042297"}


id: PBO:0089820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)tt","termid":"PBO:0089820"}


id: GO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that is a short, rounded projection from a plant epidermal cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plant cell papilla","termid":"GO:0090395"}


id: PBO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dmx like 1","termid":"PBO:0045127"}


id: PBO:0028810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028810"}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: GO:0046382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP-D-rhamnose metabolic process","synonyms":[{"name":"GDP-D-rhamnose metabolism","type":"exact"}],"termid":"GO:0046382"}


id: PBO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.8","termid":"PBO:0005505"}


id: PBO:0073192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein V","termid":"PBO:0073192"}


id: GO:0010438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfur starvation","termid":"GO:0010438"}


id: GO:0033180
data:
  {"annotated_genes":["SJAG_04015","SJAG_01447","SJAG_01397","SJAG_04955","SJAG_01471","SJAG_01817","SJAG_00212","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98851,114863,95101,96187,84286,106070,92810,97820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.","definition_xrefs":["ISBN:0716743663","PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, catalytic domain","termid":"GO:0033178"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033180","terms_by_termid":{"GO:0000221":null}}


id: GO:0052743
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[104490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[104492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol tetrakisphosphate + H2O = myo-inositol trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol tetrakisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052743","terms_by_termid":{"GO:0052659":null,"GO:1990649":null,"GO:1990650":null}}


id: PBO:0056421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 2","termid":"PBO:0056421"}


id: PBO:0049600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 3","termid":"PBO:0049600"}


id: GO:0033112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the cyanelle and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle envelope","termid":"GO:0033112"}


id: GO:0043791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylamine + a dimethylamine corrinoid protein = a methylated dimethylamine corrinoid protein + methylamine.","definition_xrefs":["PMID:9874228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dimethylamine methyltransferase activity","secondary_identifiers":["RHEA:41175","EC:2.1.1.249","MetaCyc:RXN-8100"],"synonyms":[{"name":"DMA methyltransferase 1","type":"exact"},{"name":"DMAMT 1","type":"exact"},{"name":"MT1","type":"broad"},{"name":"dimethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"},{"name":"dimethylamine:corrinoid methyltransferase activity","type":"exact"},{"name":"mtbB1","type":"related"}],"termid":"GO:0043791"}


id: GO:0035325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like protein, a pattern recognition receptor that binds pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:19076341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor binding","synonyms":[{"name":"TLR binding","type":"exact"}],"termid":"GO:0035325"}


id: PBO:0047440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 11","termid":"PBO:0047440"}


id: PBO:0053460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 415","termid":"PBO:0053460"}


id: PBO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.42","termid":"PBO:0003190"}


id: GO:0102359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7,8-dihydroxycoumarin = UDP + 4-O- beta -D-glucosyl-daphnetin + H+.","definition_xrefs":["EC:2.4.1.126","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"daphnetin 4-O-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13450"],"termid":"GO:0102359"}


id: PBO:0067558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 711, pseudogene","termid":"PBO:0067558"}


id: GO:0097434
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97848],"is_not":false,"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: succinate(out) + H+(out) = succinate(in) + H+(in).","definition_xrefs":["PMID:1293882","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"succinate:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29303"],"synonyms":[{"name":"succinate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0097434","terms_by_termid":{"GO:0097434":null}}


id: GO:0019001
data:
  {"annotated_genes":["SJAG_03371","SJAG_02444","SJAG_00840","SJAG_03959","SJAG_01558","SJAG_04666","SJAG_01695","SJAG_04470","SJAG_03846","SJAG_00414","SJAG_03072","SJAG_04343","SJAG_03915","SJAG_01277","SJAG_03137","SJAG_04375","SJAG_00968","SJAG_00906","SJAG_03453","SJAG_00466","SJAG_05332","SJAG_02856","SJAG_03688","SJAG_03684","SJAG_01696","SJAG_02848","SJAG_02684","SJAG_02661","SJAG_03461","SJAG_04387","SJAG_01339","SJAG_00031","SJAG_00231","SJAG_04157","SJAG_02180","SJAG_03275","SJAG_02595","SJAG_00424","SJAG_02604","SJAG_04509","SJAG_03342","SJAG_04940","SJAG_00457","SJAG_01456","SJAG_04366","SJAG_00659","SJAG_04874","SJAG_05030","SJAG_01774","SJAG_02509","SJAG_00360","SJAG_01909","SJAG_01438","SJAG_02605","SJAG_02353","SJAG_01851","SJAG_02233","SJAG_01929","SJAG_00663","SJAG_02656","SJAG_01769","SJAG_01358","SJAG_02384","SJAG_04004","SJAG_02374","SJAG_00118","SJAG_02302","SJAG_03374","SJAG_02640","SJAG_00344","SJAG_04862","SJAG_02171","SJAG_01215","SJAG_01789","SJAG_03732","SJAG_04410","SJAG_00044","SJAG_01449","SJAG_00983","SJAG_04003","SJAG_01379","SJAG_04351","SJAG_01534","SJAG_03188","SJAG_00226","SJAG_00801","SJAG_02824","SJAG_02331","SJAG_02520","SJAG_04233","SJAG_02601","SJAG_01391","SJAG_02292","SJAG_02366","SJAG_00430"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106739,87073,87897,88634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[111860,85121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[108599,112152,87502,86531,94580,107634,89071,87295,97032,93947,103386,92470,107038,89006,101596,99069,112268,91430,112798,100789,109062,115091,108329,90480,94495,114504,98955,101085,106740,90703,108597,105532,106741,98835,88129,88635,103365,97143,97634,103325,104664,114619,88188,102738,89602,90430,97954,95819,85964,85670,87074,103626,108598,101239,113653,99859,97470,112114,96839,104902,106733,113654,60524,91965,90528,100111,88914,88224,92708,94496,84157,89804,89805,95889,97422,100201,103618,113648,105958,102194,107716,85122,89459,109729,94096,114617,115090,89806,96294,98812,114618,113486,96137,93268,100840,85475,106467,105051,104930,105464,99682,90056,89659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl nucleotide, consisting of guanosine esterified with (ortho)phosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide binding","termid":"GO:0017076"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanyl nucleotide binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-156909"],"termid":"GO:0019001","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: FYPO:0001994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is swollen, is elongated, and is inviable. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell. The cell compartment containing the nucleus is swollen (i.e. has a larger diameter than the other compartment).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized septum, near new end","termid":"FYPO:0001391"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell with mislocalized septum","termid":"FYPO:0001992"},{"relation_name":"is_a","term_name":"inviable swollen mononucleate monoseptate vegetative cell","termid":"FYPO:0002103"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"output_of","term_name":"abnormal cell cycle arrest in mitotic interphase before NETO","termid":"FYPO:0002017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000004","FYPO:0000337","FYPO:0000032","FYPO:0000138"],"is_obsolete":false,"name":"inviable swollen elongated mononucleate vegetative cell with mislocalized septum near new end","synonyms":[{"name":"inviable elongated mononucleate vegetative cell with mislocalized septum near new end and increased cell volume","type":"exact"},{"name":"inviable enlarged elongated mononucleate vegetative cell with mislocalized septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate cell with mislocalized septum near non-growing end","type":"narrow"},{"name":"inviable swollen elongated mononucleate monoseptate vegetative cell with mislocalized septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with mislocalised septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with mislocalized septum near new end and mislocalized nucleus","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with mislocalized septum near new end during mitotic cell cycle","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with misplaced septum near new end","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with single mislocalized septum near new end","type":"exact"},{"name":"lethal; swollen elongated mononucleate vegetative cell with mislocalized septum near new end","type":"exact"},{"name":"long swollen mononucleate cell with mislocalized septum near new end","type":"exact"},{"name":"long swollen mononucleate cell with mislocalized septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with abnormal septum location near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with abnormal septum location near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with abnormal septum position near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with abnormal septum position near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with asymmetric septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with asymmetric septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with asymmetrically located septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with asymmetrically located septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with mislocalised septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with mislocalised septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with mislocalized septum near new end","type":"exact"},{"name":"swollen elongated mononucleate cell with mislocalized septum near new end during vegetative growth","type":"exact"},{"name":"swollen elongated mononucleate cell with mislocalized septum near non-growing end","type":"narrow"},{"name":"swollen elongated mononucleate cell with mislocalized septum near non-growing end during vegetative growth","type":"narrow"},{"name":"swollen elongated mononucleate vegetative cell with mislocalized septum near non-growing end","type":"narrow"}],"termid":"FYPO:0001994"}


id: PBO:0045048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLC1 Rho GTPase activating protein","termid":"PBO:0045048"}


id: PBO:0065518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 3","termid":"PBO:0065518"}


id: GO:0009055
data:
  {"annotated_genes":["SJAG_03929","SJAG_00755","SJAG_04152","SJAG_04217","SJAG_MIT04","SJAG_00260","SJAG_04265","SJAG_00455","SJAG_07006","SJAG_01671","SJAG_01490","SJAG_02744","SJAG_MIT20","SJAG_01355","SJAG_00601","SJAG_02646","SJAG_02504","SJAG_07007","SJAG_01077","SJAG_03920","SJAG_05629","SJAG_00976","SJAG_MIT13","SJAG_01190","SJAG_03337","SJAG_MIT03","SJAG_03490"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62523,85057,85420,104037,105447,111413,112293,112938],"is_not":false,"summary":null,"term":"GO:0009055"},{"annotations":[88153,115207,111630,104477,110839,115208,110413,85457,112997,115183,84448,115184,115163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[109052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[100266,113836,115187,109598,100672,104154,114299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"A molecular function representing the directed movement of electrons from one molecular entity to another, typically mediated by electron carriers or acceptors, resulting in the transfer of energy and/or the reduction-oxidation (redox) transformation of chemical species. This activity is fundamental to various biological processes, including cellular respiration and photosynthesis, as well as numerous enzymatic reactions involved in metabolic pathways.","definition_xrefs":["Wikipedia:Electron_transfer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00455":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_03929":null,"SJAG_04152":null,"SJAG_04217":null,"SJAG_04265":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transfer activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2564826","Reactome:R-HSA-169260","GO:0009054","GO:0009053"],"synonyms":[{"name":"electron acceptor activity","type":"narrow"},{"name":"electron carrier","type":"related"},{"name":"electron donor activity","type":"narrow"},{"name":"electron transporter activity","type":"related"}],"termid":"GO:0009055","terms_by_termid":{"GO:0004129":null,"GO:0008121":null,"GO:0008137":null,"GO:0009055":null}}


id: GO:0045815
data:
  {"annotated_genes":["SJAG_04576","SJAG_00735","SJAG_02768","SJAG_02447","SJAG_01111","SJAG_02869","SJAG_02385","SJAG_04005","SJAG_00641","SJAG_03431","SJAG_00746","SJAG_03776","SJAG_02589","SJAG_00739","SJAG_02872","SJAG_00873","SJAG_03599","SJAG_01658","SJAG_02798","SJAG_01711","SJAG_02170","SJAG_02906","SJAG_03576","SJAG_03944","SJAG_02303","SJAG_01325","SJAG_03752","SJAG_00743","SJAG_02066","SJAG_05020","SJAG_03441","SJAG_04989","SJAG_01622","SJAG_02549","SJAG_01230","SJAG_02329","SJAG_03033","SJAG_00896","SJAG_04205","SJAG_03839","SJAG_02927","SJAG_05313","SJAG_04038","SJAG_01465","SJAG_01513","SJAG_00184","SJAG_03787","SJAG_00087","SJAG_02500","SJAG_02773","SJAG_03694","SJAG_02571","SJAG_02314","SJAG_04097","SJAG_00581","SJAG_00045","SJAG_03145","SJAG_04194","SJAG_04596","SJAG_01110","SJAG_02981","SJAG_02541","SJAG_02458","SJAG_01804","SJAG_04213","SJAG_04274","SJAG_02846","SJAG_05192","SJAG_00584","SJAG_07011","SJAG_04758","SJAG_03668","SJAG_04755","SJAG_01653","SJAG_00769","SJAG_01475","SJAG_01016","SJAG_01611","SJAG_03884","SJAG_03758","SJAG_03579","SJAG_04613","SJAG_00440","SJAG_02466","SJAG_03366","SJAG_00441","SJAG_02254","SJAG_00868","SJAG_00349"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83912,84060,84232,84411,84593,84739,85109,85344,85514,86024,86297,86812,86917,86931,87615,88501,89000,89716,89986,90219,90322,90336,90352,90381,90409,90506,90840,91652,91677,92088,92093,92646,92852,93287,94020,94435,94699,94862,95330,95576,97155,97742,98967,99306,99555,100747,101199,101207,101808,101949,102933,103086,103518,103631,103877,104072,104657,105266,105547,105669,105782,106673,106808,107947,108746,109173,109330,109347,109513,110409,110419,110493,110583,110896,111189,111435,111560,111574,111876,112469,112531,112719,113080,113427,113608,113693,113715,113763,114110],"is_not":false,"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"An epigenetic mechanism of regulation of gene expression that involves chromatin remodeling to capacitate gene expression by either modifying the chromatin fiber, the nucleosomal histones, or the DNA.","definition_xrefs":["PMID:34414474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression, epigenetic","termid":"GO:0141137"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II 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initiation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048096"],"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin-mediated maintenance of transcription","type":"exact"},{"name":"epigenetic maintenance of chromatin in transcription-competent conformation","type":"exact"},{"name":"euchromatin assembly","type":"related"},{"name":"euchromatin organisation","type":"related"},{"name":"euchromatin organization","type":"related"},{"name":"long-term maintenance of gene activation","type":"related"},{"name":"maintenance of chromatin in transcription-competent conformation","type":"exact"},{"name":"transciptional initiation-coupled chromatin remodeling","type":"exact"},{"name":"transciptional initiation-coupled chromatin remodelling","type":"exact"},{"name":"transcription initiation coupled chromatin remodeling","type":"exact"},{"name":"transcription initiation coupled chromatin remodelling","type":"exact"},{"name":"transcriptional initiation-coupled chromatin remodeling","type":"exact"},{"name":"transcriptional initiation-coupled chromatin remodelling","type":"exact"}],"termid":"GO:0045815","terms_by_termid":{"GO:0045815":null}}


id: PBO:0068153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 460","termid":"PBO:0068153"}


id: FYPO:0001729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-cysteine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular cysteine level","termid":"FYPO:0001726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar cysteine level","synonyms":[{"name":"normal level of cysteine in vacuole","type":"exact"},{"name":"normal vacuolar L-cysteine level","type":"exact"},{"name":"normal vacuolar cysteine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar cysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001729"}


id: GO:0035923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to flurbiprofen.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"flurbiprofen binding","synonyms":[{"name":"2-(2-fluoro-[1,1'-biphenyl-4-yl])propanoic acid binding","type":"exact"}],"termid":"GO:0035923"}


id: PBO:0038831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 4","termid":"PBO:0038831"}


id: PBO:0040895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMPR1B divergent transcript","termid":"PBO:0040895"}


id: GO:1990898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis. Proteins involved in this process include the MRX/MRN complex and Sae2/Ctp1/RBBP8(CtIP).","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break clipping (obsolete GO:1990898)","termid":"GO:1990898"}


id: PBO:0038284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_display_name","termid":"PBO:0038284"}


id: PBO:0063983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 17","termid":"PBO:0063983"}


id: PBO:0055487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2920","termid":"PBO:0055487"}


id: PBO:0018190
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axonal neuropathy","termid":"PBO:0018190"}


id: PR:P62506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl44 gene.","definition_xrefs":["UniProtKB:P62506","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L44, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.14","synonyms":[{"name":"Spom972h-mrpl44","type":"exact"}],"termid":"PR:P62506"}


id: PR:O74815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk27 gene.","definition_xrefs":["UniProtKB:O74815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.04","synonyms":[{"name":"Spom972h-ppk27","type":"exact"}],"termid":"PR:O74815"}


id: GO:0102193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a [protein]-N6-D-ribulosyl-L-lysine = ADP + a [protein]-N6-(3-O-phospho-D-ribulosyl)-L-lysine.","definition_xrefs":["EC:2.7.1.172","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-ribulosamine 3-kinase activity","secondary_identifiers":["MetaCyc:RXN-12003","RHEA:48432"],"termid":"GO:0102193"}


id: GO:0106129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["PMID:23447642","GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"positively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of store-operated calcium entry","termid":"GO:0106129"}


id: PBO:0028382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_G0","termid":"PBO:0028382"}


id: GO:0047583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methoxy-2,4-dioxobutanoate + H2O = H+ + methanol + oxaloacetate.","definition_xrefs":["RHEA:10564","EC:3.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"4-methyloxaloacetate esterase activity","secondary_identifiers":["KEGG_REACTION:R01144","MetaCyc:4-METHYLOXALOACETATE-ESTERASE-RXN"],"synonyms":[{"name":"oxaloacetate-4-methyl-ester oxaloacetohydrolase activity","type":"related"}],"termid":"GO:0047583"}


id: GO:0018559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1-dichloro-2-(dihydroxy-4'-chorophenyl)-2-(4-chlorophenyl)ethene + O2 = 6-oxo-2-hydroxy-7-(4-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate.","definition_xrefs":["UM-BBD_reactionID:r0442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethene 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"synonyms":[{"name":"1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethylene 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018559"}


id: GO:2000012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of auxin polar transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of auxin polar transport","termid":"GO:2000012"}


id: PBO:0064714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 50","termid":"PBO:0064714"}


id: MOD:00351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-1-(phosphatidyl)ethanolamine.","definition_xrefs":["RESID:AA0346","PubMed:11100732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycyl-1-(phosphatidyl)ethanolamine","synonyms":[{"name":"(R)-1-hexadecanoyloxy-2-((Z)-9-octadecenoyloxy)-3-[2-(aminoacetylamino)ethyloxyphospho]propane","type":"exact"},{"name":"LIPID Phosphatidylethanolamine amidated glycine","type":"exact"},{"name":"N-glycyl-1-(phosphatidyl)ethanolamine","type":"exact"},{"name":"N-glycyl-1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine","type":"exact"}],"termid":"MOD:00351"}


id: GO:0004001
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113019],"is_not":false,"summary":null,"term":"GO:0004001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + adenosine = ADP + AMP.","definition_xrefs":["PMID:11223943","EC:2.7.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"adenosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ADENOSINE-KINASE-RXN","RHEA:20824","Reactome:R-HSA-109624","Reactome:R-HSA-9754974"],"synonyms":[{"name":"ATP:adenosine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine 5-phosphotransferase activity","type":"exact"},{"name":"adenosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004001","terms_by_termid":{"GO:0004001":null}}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of signal transduction in another organism","termid":"GO:0044509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of signal transduction in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: GO:0005896
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric protein complex consisting of two molecules each of interleukin-6, interleukin-6 receptor alpha chain, and gp-130.","definition_xrefs":["PMID:8083235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-6 receptor complex","synonyms":[{"name":"IL-6 receptor complex","type":"exact"}],"termid":"GO:0005896"}


id: PBO:0068601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 52, pseudogene","termid":"PBO:0068601"}


id: PBO:0052602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 divergent transcript","termid":"PBO:0052602"}


id: GO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of membrane attack complex","termid":"GO:0001969"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of membrane attack complex","synonyms":[{"name":"activation of activation of membrane attack complex","type":"narrow"},{"name":"positive regulation of MAC assembly","type":"exact"},{"name":"positive regulation of MAC formation","type":"exact"},{"name":"positive regulation of activation of MAC","type":"exact"},{"name":"positive regulation of activation of TCC","type":"narrow"},{"name":"positive regulation of activation of terminal complement complex","type":"narrow"},{"name":"positive regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"positive regulation of membrane attack complex assembly","type":"exact"},{"name":"positive regulation of membrane attack complex formation","type":"exact"},{"name":"stimulation of activation of membrane attack complex","type":"narrow"},{"name":"up regulation of activation of membrane attack complex","type":"exact"},{"name":"up-regulation of activation of membrane attack complex","type":"exact"},{"name":"upregulation of activation of membrane attack complex","type":"exact"}],"termid":"GO:0001970"}


id: PBO:0002295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transporter Sut1","termid":"PBO:0002295"}


id: GO:1903484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic actomyosin contractile ring localization.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of mitotic actomyosin contractile ring localization (obsolete GO:1903484)","synonyms":[{"name":"down regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"down regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"down regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"down-regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"downregulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"downregulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"downregulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"inhibition of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"inhibition of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"inhibition of maintenance of mitotic actomyosin contractile ring localization","type":"narrow"},{"name":"negative regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"negative regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903484"}


id: FYPO:0002696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylenetetrahydrofolate reductase (NADPH) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished methylenetetrahydrofolate reductase (NADPH) activity","synonyms":[{"name":"methylenetetrahydrofolate reductase (NADPH) activity abolished","type":"exact"}],"termid":"FYPO:0002696"}


id: PBO:0077238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 3","termid":"PBO:0077238"}


id: GO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an arterial endothelial cell fate and its capacity to differentiate into an arterial endothelial cell.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"},{"relation_name":"part_of","term_name":"arterial endothelial cell differentiation","termid":"GO:0060842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arterial endothelial cell fate commitment","termid":"GO:0060844"}


id: PBO:0051512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 2","termid":"PBO:0051512"}


id: PBO:0086273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a likely role in ribosomal maturation; required for accumulation of wild-type levels of large (60S) ribosomal subunits; binds to the helicase Dbp6p in pre-60S ribosomal particles in the nucleolus","termid":"PBO:0086273"}


id: PBO:0072458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: PR:O74885
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- xan1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxygenase C576.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.01c","synonyms":[{"name":"Spom972h-xan1","type":"exact"}],"termid":"PR:O74885"}


id: GO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-(2-hydroxyisopropyl)phenylurea + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + carbamic acid.","definition_xrefs":["UM-BBD_reactionID:r0895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"4'-(2-hydroxyisopropyl)phenylurea amidohydrolase activity","termid":"GO:0034571"}


id: PBO:0077394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132B","termid":"PBO:0077394"}


id: PBO:0048994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 5","termid":"PBO:0048994"}


id: PBO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_for","termid":"PBO:0034322"}


id: PBO:0053733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 954","termid":"PBO:0053733"}


id: PBO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit","termid":"PBO:0002046"}


id: GO:0097149
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex playing a key role in the formation of the central spindle in mitosis. Made up of two molecules each of a mitotic kinesin (ZEN-4 in Caenorhabditis elegans or MKLP1 in mammals) and of two molecules each of a GTPase activating protein (GAP) factor (CYK-4 in Caenorhabditis elegans or MgcRacGAP in mammals).","definition_xrefs":["PMID:16236794","GOC:ans","PMID:11782313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0072686","GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"centralspindlin complex","termid":"GO:0097149"}


id: GO:0008977
data:
  {"annotated_genes":["SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110989],"is_not":false,"summary":null,"term":"GO:0008977"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + prephenate = (4-hydroxyphenyl)pyruvate + CO2 + NADH.","definition_xrefs":["RHEA:13869","EC:1.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"prephenate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01728","MetaCyc:PREPHENATEDEHYDROG-RXN"],"synonyms":[{"name":"chorismate mutase--prephenate dehydrogenase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"},{"name":"prephenate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0008977","terms_by_termid":{"GO:0008977":null}}


id: GO:0006508
data:
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id: GO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a protein is incorporated into a mitochondrial membrane as the initial phase of the mitochondrial membrane permeabilization that takes place in the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","PMID:12952892","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete protein insertion into mitochondrial membrane involved in apoptotic signaling pathway (obsolete GO:0001844)","synonyms":[{"name":"insertion of proteins into mitochondrial membranes during the induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrial membrane during induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrial membrane involved in induction of apoptosis","type":"narrow"},{"name":"protein insertion into mitochondrion membrane during induction of apoptosis","type":"narrow"}],"termid":"GO:0001844"}


id: PBO:0074299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted LY6/PLAUR domain containing 2","termid":"PBO:0074299"}


id: GO:1904886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a beta-catenin destruction complex into its constituent components.","definition_xrefs":["GOC:bf","PMID:23169527","GOC:PARL","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"beta-catenin destruction complex disassembly","synonyms":[{"name":"23S APC complex disassembly","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex disassembly","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex disassembly","type":"exact"},{"name":"BDC disassembly","type":"exact"},{"name":"beta-catenin degradation complex disassembly","type":"exact"},{"name":"dissociation of beta-catenin degradation complex","type":"exact"}],"termid":"GO:1904886"}


id: PBO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transporter (predicted)","termid":"PBO:0001286"}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: GO:0008740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnose = L-rhamnulose.","definition_xrefs":["RHEA:23160","EC:5.3.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-rhamnose isomerase activity","secondary_identifiers":["KEGG_REACTION:R02437","MetaCyc:RHAMNISOM-RXN"],"synonyms":[{"name":"L-rhamnose aldose-ketose-isomerase activity","type":"related"},{"name":"L-rhamnose ketol-isomerase activity","type":"related"},{"name":"rhamnose isomerase activity","type":"related"}],"termid":"GO:0008740"}


id: PBO:0042387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300e molecule","termid":"PBO:0042387"}


id: PBO:0071089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 91","termid":"PBO:0071089"}


id: PBO:0039110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor","termid":"PBO:0039110"}


id: PATO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking physically interaction with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociated from","synonyms":[{"name":"dissociated","type":"exact"}],"termid":"PATO:0001738"}


id: PBO:0085438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; HRB1 has a paralog, GBP2, that arose from the whole genome duplication","termid":"PBO:0085438"}


id: GO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"positively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070109"}


id: PBO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 5","termid":"PBO:0048743"}


id: GO:0033223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 2-aminoethylphosphonate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate transport","synonyms":[{"name":"2-phosphonoethylamine transport","type":"exact"},{"name":"ciliatine transport","type":"exact"}],"termid":"GO:0033223"}


id: PBO:0031574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vegetative_cell","termid":"PBO:0031574"}


id: PBO:0043249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 8","termid":"PBO:0043249"}


id: GO:0016167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glial cell line-derived neurotrophic factor and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor activity","synonyms":[{"name":"GDNF receptor activity","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0016167"}


id: PBO:0038765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 2","termid":"PBO:0038765"}


id: PATO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000819 quantity (obsolete PATO:0000819)","termid":"PATO:0000819"}


id: PBO:0083151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF RAV2/YDR202C","termid":"PBO:0083151"}


id: GO:0034445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein particle oxidation, occurring in the blood plasma.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma lipoprotein oxidation","termid":"GO:0034444"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"plasma lipoprotein particle oxidation","termid":"GO:0034441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma lipoprotein oxidation","synonyms":[{"name":"inhibition of plasma lipoprotein oxidation","type":"narrow"},{"name":"negative regulation of plasma lipoprotein particle oxidation","type":"related"}],"termid":"GO:0034445"}


