# terms

id: PBO:0039128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen induced 1 pseudogene 1","termid":"PBO:0039128"}


id: PBO:0065143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin releasing hormone receptor","termid":"PBO:0065143"}


id: PBO:0083950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the translation initiation factor eIF2; involved in the identification of the start codon; binds GTP when forming the ternary complex with GTP and tRNAi-Met; mutations in human ortholog cause X-linked intellectual disability (XLID) syndrome","termid":"PBO:0083950"}


id: FYPO:0003656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to vanadate ions (VO4(3-)). Cells stop growing (and may die) at a concentration of vanadate ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to vanadate","secondary_identifiers":["FYPO:0000718"],"synonyms":[{"name":"hypersensitive to trisodium vanadate","type":"narrow"},{"name":"hypersensitive to vanadate","type":"exact"},{"name":"sensitive to sodium orthovanadate","type":"narrow"},{"name":"sensitive to trisodium vanadate","type":"narrow"},{"name":"sensitive to trisodium vanadate during mitotic cell cycle","type":"related"},{"name":"sensitive to trisodium vanadate during vegetative growth","type":"narrow"},{"name":"sensitive to vanadate during mitotic cell cycle","type":"related"},{"name":"sensitive to vanadate during vegetative growth","type":"exact"},{"name":"sensitive to vanadate ions","type":"exact"},{"name":"sensitive to vanadate(3-)","type":"exact"},{"name":"sensitive to vanadium oxoanion","type":"broad"}],"termid":"FYPO:0003656"}


id: PBO:0069894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1184, pseudogene","termid":"PBO:0069894"}


id: SO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000503 alternately_spliced_gene_encodeing_one_transcript (obsolete SO:0000503)","termid":"SO:0000503"}


id: PBO:0036381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CXorf56 and C15orf40 ortholog","termid":"PBO:0036381"}


id: PR:Q9P7C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erj5 gene.","definition_xrefs":["UniProtKB:Q9P7C1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C2E1P5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.03","synonyms":[{"name":"Spom972h-erj5","type":"exact"}],"termid":"PR:Q9P7C1"}


id: GO:0004309
data:
  {"annotated_genes":["SJAG_00570","SJAG_03964","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91994,101371,107984],"is_not":false,"summary":null,"term":"GO:0004309"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: polyphosphate(n) + H2O = polyphosphate(n-1) + phosphate.","definition_xrefs":["EC:3.6.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01154":null,"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"exopolyphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:EXOPOLYPHOSPHATASE-RXN","RHEA:21528"],"synonyms":[{"name":"Gra-Pase activity","type":"related"},{"name":"acid phosphoanhydride phosphohydrolase activity","type":"related"},{"name":"exopolypase activity","type":"related"},{"name":"metaphosphatase activity","type":"broad"},{"name":"polyphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004309","terms_by_termid":{"GO:0004309":null}}


id: GO:0008806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate.","definition_xrefs":["EC:3.1.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"carboxymethylenebutenolidase activity","secondary_identifiers":["MetaCyc:CARBOXYMETHYLENEBUTENOLIDASE-RXN","RHEA:12372","UM-BBD_enzymeID:e0066","GO:0018735"],"synonyms":[{"name":"4-carboxymethylenebut-2-en-4-olide lactonohydrolase activity","type":"related"},{"name":"carboxymethylene butenolide hydrolase activity","type":"related"},{"name":"dienelactone hydrolase activity","type":"related"},{"name":"maleylacetate enol-lactonase activity","type":"related"}],"termid":"GO:0008806"}


id: PBO:0074735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 93","termid":"PBO:0074735"}


id: PATO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to varying or changing.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability","synonyms":[{"name":"variability of a physical quality","type":"related"}],"termid":"PATO:0001303"}


id: GO:1905558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"negatively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"down regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"downregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"downregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"downregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"downregulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"inhibition of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope degradation","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"negative regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope degradation","type":"exact"}],"termid":"GO:1905558"}


id: GO:0050351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + trimetaphosphate = 2 H+ + triphosphate.","definition_xrefs":["RHEA:11088","EC:3.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trimetaphosphatase activity","secondary_identifiers":["KEGG_REACTION:R02504","MetaCyc:TRIMETAPHOSPHATASE-RXN"],"synonyms":[{"name":"inorganic trimetaphosphatase activity","type":"related"},{"name":"trimetaphosphate hydrolase activity","type":"related"}],"termid":"GO:0050351"}


id: FYPO:0007749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle is decreased during the first meiotic nuclear division.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle during meiosis I","type":"exact"},{"name":"decreased protein localization to meiosis I spindle","type":"exact"},{"name":"decreased protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle during meiosis I","type":"exact"}],"termid":"FYPO:0007749"}


id: PR:O59739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag102 gene.","definition_xrefs":["UniProtKB:O59739","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.03c","synonyms":[{"name":"BAG-1B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag102","type":"exact"}],"termid":"PR:O59739"}


id: GO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus","synonyms":[{"name":"regulation of antiviral response","type":"exact"}],"termid":"GO:0050688"}


id: PBO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 1","termid":"PBO:0061061"}


id: PBO:0065561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 1","termid":"PBO:0065561"}


id: PBO:0075002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-13","termid":"PBO:0075002"}


id: PBO:0045789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3D, pseudogene","termid":"PBO:0045789"}


id: PBO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 associated protein Utp25 (predicted)","termid":"PBO:0005844"}


id: GO:0061071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the urethra epithelium over time from its initial formation to the mature structure. The urethra is a renal system organ that carries urine from the bladder to outside the body. The epithelium is the tubular, planar layer of cells through which the urine passes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urethra epithelium development","termid":"GO:0061071"}


id: PBO:0087476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both the ERMES and the SAM complex; component of ERMES complex which acts as a molecular tether between the mitochondria and the ER, necessary for efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex component that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex is often co-localized with peroxisomes and concentrated areas of pyruvate dehydrogenase","termid":"PBO:0087476"}


id: PBO:0025494
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile Refsum disease","termid":"PBO:0025494"}


id: GO:0004864
data:
  {"annotated_genes":["SJAG_04999","SJAG_04627","SJAG_03272","SJAG_03309","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85612,86508],"is_not":false,"summary":null,"term":"GO:0004864"},{"annotations":[95619,84109,107569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase inhibitor activity","termid":"GO:0019212"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0004857","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990681"],"synonyms":[{"name":"phosphoprotein phosphatase inhibitor activity","type":"exact"},{"name":"protein phosphatase 2 inhibitor activity","type":"narrow"},{"name":"protein phosphatase type 2A inhibitor activity","type":"narrow"}],"termid":"GO:0004864","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: PBO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein subunit of SEA and Iml1 complexes Iml1 (predicted)","termid":"PBO:0036477"}


id: PBO:0062151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 1 pseudogene","termid":"PBO:0062151"}


id: PBO:0044463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 62, pseudogene","termid":"PBO:0044463"}


id: PATO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000283 f2 fertility (obsolete PATO:0000283)","termid":"PATO:0000283"}


id: GO:0008801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate.","definition_xrefs":["RHEA:20113","EC:5.4.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"beta-phosphoglucomutase activity","secondary_identifiers":["KEGG_REACTION:R02728","MetaCyc:BETA-PHOSPHOGLUCOMUTASE-RXN"],"synonyms":[{"name":"beta-D-glucose 1,6-phosphomutase activity","type":"related"}],"termid":"GO:0008801"}


id: PR:000027598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.3 (Schizosaccharomyces pombe)","termid":"PR:000027596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-","type":"exact"}],"termid":"PR:000027598"}


id: FYPO:0006455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis I","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006455"}


id: PBO:0085190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosins; localizes to actin cortical patches; deletion of MYO3 has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO3 has a paralog, MYO5, that arose from the whole genome duplication","termid":"PBO:0085190"}


id: PBO:0081088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 18","termid":"PBO:0081088"}


id: PBO:0079654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 2","termid":"PBO:0079654"}


id: PBO:0049521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 3","termid":"PBO:0049521"}


id: MOD:01388
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanol.","definition_xrefs":["RESID:AA0465","ChEBI:15675","PubMed:7328054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanol","synonyms":[{"name":"(2R)-1-aminopropan-2-ol","type":"exact"},{"name":"1-amino-2-hydroxypropane","type":"exact"},{"name":"1-amino-2-propanol","type":"exact"},{"name":"1-methyl-2-aminoethanol","type":"exact"},{"name":"2-amino-1-methylethanol","type":"exact"},{"name":"2-hydroxy-1-propylamine","type":"exact"},{"name":"2-hydroxypropanamine","type":"exact"},{"name":"2-hydroxypropylamine","type":"exact"},{"name":"MOD_RES Decarboxylated threonine","type":"exact"},{"name":"alpha-aminoisopropyl alcohol","type":"exact"},{"name":"dCbxThr","type":"exact"},{"name":"decarboxylated threonine","type":"exact"},{"name":"isopropanolamine","type":"exact"},{"name":"threamine","type":"exact"}],"termid":"MOD:01388"}


id: PBO:0046965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member C","termid":"PBO:0046965"}


id: GO:0098556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of rough endoplasmic reticulum membrane","termid":"GO:0098556"}


id: PBO:0079674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 4","termid":"PBO:0079674"}


id: PBO:0074347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6","termid":"PBO:0074347"}


id: PBO:0071147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 11","termid":"PBO:0071147"}


id: GO:0030093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Photosystem located in the chloroplast that functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem I","termid":"GO:0009522"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast photosystem I","termid":"GO:0030093"}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: PBO:0066018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN, member RAS oncogene family","termid":"PBO:0066018"}


id: PATO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxy","termid":"PATO:0002384"}


id: PR:000027556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated form in which the phosphorylation occurs at the Ser or Thr residue within the LLPKx[ST] motif by the mitotic checkpoint serine/threonine-protein kinase BUB1. Example: UniProtKB:P04910, Ser-122, MOD:00046.","definition_xrefs":["PRO:CNA","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2 phosphorylated form","termid":"PR:000027552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated 2","synonyms":[{"name":"HTA2/Phos:2","type":"exact"}],"termid":"PR:000027556"}


id: GO:0018601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrophenol + H+ + NADH + O2 = 4-nitrocatechol + H2O + NAD+.","definition_xrefs":["RHEA:12568","EC:1.14.13.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-nitrophenol 2-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0230","KEGG_REACTION:R03023","MetaCyc:4-NITROPHENOL-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-nitrophenol hydroxylase activity","type":"related"},{"name":"4-nitrophenol,NADH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"4-nitrophenol-2-hydroxylase activity","type":"related"}],"termid":"GO:0018601"}


id: FYPO:0006925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates at or near replication fork barriers is lower than normal.","definition_xrefs":["PomBase:mah","PMID:31149897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers during vegetative growth","type":"related"},{"name":"reduced number of Rad51 foci at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006925"}


id: PBO:0063972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 6","termid":"PBO:0063972"}


id: PBO:0014235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated NEDD8-dissociated protein Knd1 (predicted)","termid":"PBO:0014235"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: PBO:0069756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1039, pseudogene","termid":"PBO:0069756"}


id: PBO:0040325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1","termid":"PBO:0040325"}


id: GO:0030595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte in response to an external stimulus.","definition_xrefs":["GOC:add","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis","synonyms":[{"name":"immune cell chemotaxis","type":"exact"},{"name":"leucocyte chemotaxis","type":"exact"}],"termid":"GO:0030595"}


id: GO:0019414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An aerobic respiration process in which a sulfur-containing molecule (hydrogen sulfide, sulfur, sulfite, thiosulfate, and various polythionates) is oxidized.","definition_xrefs":["PMID:11425697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using sulfur or sulfate as electron donor","synonyms":[{"name":"aerobic respiration, using sulphur or sulphate as electron donor","type":"exact"}],"termid":"GO:0019414"}


id: GO:0070159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling threonine to threonyl-tRNA in a mitochondrion, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonyl-tRNA aminoacylation","termid":"GO:0006435"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0140053","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"mitochondrial threonyl-tRNA aminoacylation","termid":"GO:0070159"}


id: GO:1902138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"(-)-secoisolariciresinol metabolic process","termid":"GO:1902136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(-)-secoisolariciresinol biosynthetic process","synonyms":[{"name":"(-)-secoisolariciresinol anabolism","type":"exact"},{"name":"(-)-secoisolariciresinol biosynthesis","type":"exact"},{"name":"(-)-secoisolariciresinol formation","type":"exact"},{"name":"(-)-secoisolariciresinol synthesis","type":"exact"}],"termid":"GO:1902138"}


id: GO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, within the host cell.","definition_xrefs":["GOC:ai","PMID:11733033","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport of virus","termid":"GO:0046794"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular transport of virus","secondary_identifiers":["GO:0046788","GO:0046795","GO:0046796"],"synonyms":[{"name":"egress of virus within host cell","type":"exact"},{"name":"intracellular transport of viral material","type":"exact"},{"name":"intracellular virion transport","type":"related"},{"name":"movement of virus within host cell","type":"exact"},{"name":"viral egress","type":"related"},{"name":"viral genome transport in host cell","type":"exact"}],"termid":"GO:0075733"}


id: PBO:0066492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 3","termid":"PBO:0066492"}


id: GO:1990883
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88817],"is_not":false,"summary":null,"term":"GO:1990883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + cytidine = CoA + N4-acetylcytidine. The cytidine is within the polynucleotide chain of an rRNA.","definition_xrefs":["PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"rRNA cytidine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990883","terms_by_termid":{"GO:1990883":null}}


id: GO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by biochemical signaling: hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure mediated by a chemical signal","synonyms":[{"name":"blood pressure regulation mediated by a chemical signal","type":"exact"}],"termid":"GO:0003044"}


id: GO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification, in which the cell wall is reinforced and made thicker, that occurs as part of the defense response of an organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"defense response by cell wall thickening","synonyms":[{"name":"cell wall thickening during defense response","type":"related"}],"termid":"GO:0052482"}


id: PR:Q9C0Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter pdr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.09c","synonyms":[{"name":"ABC transporter pdr1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pdr1","type":"exact"}],"termid":"PR:Q9C0Y5"}


id: PBO:0073488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 1 pseudogene 1","termid":"PBO:0073488"}


id: PBO:0052952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KTI12 chromatin associated homolog","termid":"PBO:0052952"}


id: PBO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochindrial dynamin family GTPase Dnm1","termid":"PBO:0017988"}


id: FYPO:0006080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type). Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah","PMID:21317872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during vegetative growth","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006080"}


id: SO:1000008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single nucleotide change which has occurred at the same position of a corresponding nucleotide in a reference sequence.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"point_mutation","secondary_identifiers":["http://en.wikipedia.org/wiki/Point_mutation"],"synonyms":[{"name":"point mutation","type":"exact"}],"termid":"SO:1000008"}


id: PBO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5 (predicted)","termid":"PBO:0002040"}


id: GO:0051468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a glucocorticoid hormone stimulus is received by a cell and converted into a molecular signal. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"detection of steroid hormone stimulus","termid":"GO:0051467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of glucocorticoid hormone stimulus","termid":"GO:0051468"}


id: GO:0106372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + primary fluorescent dioxobilin-type chlorophyll catabolite = H+ + methanol + O13(4)-desmethyl pFCC.","definition_xrefs":["PMID:23723324","RHEA:67176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"primary fluorescent dioxobilin-type chlorophyll catabolite methylesterase activity","termid":"GO:0106372"}


id: GO:0141059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont interferes with a host antimicrobial peptide, for example by cleavage or degredation.","definition_xrefs":["PMID:16242332","PMID:21335044","PMID:19015361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host antimicrobial peptide activity","synonyms":[{"name":"disruption of host antimicrobial peptide activity","type":"exact"}],"termid":"GO:0141059"}


id: PBO:0077116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM23B-AGAP6 readthrough (NMD candidate)","termid":"PBO:0077116"}


id: PBO:0059875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 12","termid":"PBO:0059875"}


id: FYPO:0007115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished, and the protein is present in the cytoplasm instead, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm","termid":"FYPO:0004735"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node during mitotic interphase","termid":"FYPO:0007139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm during mitotic interphase","synonyms":[{"name":"abolished protein localisation to medial cortical node, with protein mislocalised to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cortical medial dot, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes, with protein mislocalized to cytoplasm during mitotic interphase","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to medial cortical nodes, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein recruitment to medial cortical node, with protein mislocalized to cytoplasm during mitotic interphase","type":"related"},{"name":"protein localization to medial cortical node abolished, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"}],"termid":"FYPO:0007115"}


id: GO:0034350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell apoptotic process","synonyms":[{"name":"regulation of glial cell apoptosis","type":"related"}],"termid":"GO:0034350"}


id: GO:2000172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branching morphogenesis of a nerve.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"regulates","term_name":"branching morphogenesis of a nerve","termid":"GO:0048755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching morphogenesis of a nerve","termid":"GO:2000172"}


id: PBO:0056013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM8 homolog, U6 small nuclear RNA associated","termid":"PBO:0056013"}


id: GO:1990349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via gap junctions. A gap junction is a fine cytoplasmic channel, found in animal cells, that connects the cytoplasm of one cell to that of an adjacent cell, allowing ions and other molecules to pass freely between the two cells.","definition_xrefs":["Wikipedia:Gap_junction","PMID:23261543","GOC:hjd","PMID:14506308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gap junction-mediated intercellular transport","termid":"GO:1990349"}


id: PBO:0110342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4B (Chido/Rodgers blood group), copy 2","termid":"PBO:0110342"}


id: PBO:0073677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRPG antisense RNA 1","termid":"PBO:0073677"}


id: PBO:0058196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4489","termid":"PBO:0058196"}


id: GO:1905630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11377826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glyceraldehyde","termid":"GO:1905630"}


id: PBO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member M, pseudogene","termid":"PBO:0046988"}


id: PBO:0064082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase","termid":"PBO:0064082"}


id: PBO:0076895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 49","termid":"PBO:0076895"}


id: PBO:0056753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 4","termid":"PBO:0056753"}


id: PBO:0055034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2449","termid":"PBO:0055034"}


id: PATO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark purple","termid":"PATO:0001259"}


id: PBO:0082023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyxin","termid":"PBO:0082023"}


id: PBO:0045132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 2","termid":"PBO:0045132"}


id: FYECO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing raffinose as the carbon source, yeast extract and other components. The concentration of sucrose is typically around 2%.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose YE","synonyms":[{"name":"sucrose rich medium","type":"broad"}],"termid":"FYECO:0000144"}


id: PR:Q9P7C3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11742:SF7","PRO:DNx","OMA:SCHPO01384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.01c","secondary_identifiers":["UniProtKB:Q9P7C3"],"synonyms":[{"name":"ER alpha-1,2-mannosidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Man(9)-alpha-mannosidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MAN1B1","type":"exact"}],"termid":"PR:Q9P7C3"}


id: PBO:0112266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assigned_by","termid":"PBO:0112266"}


id: PBO:0075598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPNS lysolipid transporter 2, sphingosine-1-phosphate","termid":"PBO:0075598"}


id: GO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to guanine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase binding","termid":"GO:0002060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanine binding","termid":"GO:0002057"}


id: PBO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic centromere-SPB clustering protein Csi1","termid":"PBO:0034788"}


id: GO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the directed movement of substances within the cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host intracellular transport","synonyms":[{"name":"modulation by symbiont of host intracellular transport","type":"broad"},{"name":"modulation of host intracellular trafficking","type":"exact"}],"termid":"GO:0052038"}


id: PBO:0054103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1465","termid":"PBO:0054103"}


id: GO:1990963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-retinal barrier","synonyms":[{"name":"establishment of BRB","type":"related"},{"name":"establishment of blood-retina barrier","type":"exact"}],"termid":"GO:1990963"}


id: PBO:0054315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1707","termid":"PBO:0054315"}


id: GO:0097219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sieve plate that contains several specialized sieve areas in either a scalariform or reticulate arrangement.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve plate","termid":"GO:0097218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"compound sieve plate","termid":"GO:0097219"}


id: PBO:0091922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo Sfi1 Interactor","termid":"PBO:0091922"}


id: GO:0036133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thromboxane B2 + NAD+ = 11-dehydro-thromboxane B2 + NADH + H+.","definition_xrefs":["GOC:mw","PMID:8200461","PMID:3823488","KEGG_REACTION:R05060","PMID:3461463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"11-hydroxythromboxane B2 dehydrogenase activity","secondary_identifiers":["RHEA:52312","Reactome:R-HSA-2161732"],"synonyms":[{"name":"NAD dependent 11-hydroxythromboxane B2 dehydrogenase activity","type":"exact"}],"termid":"GO:0036133"}


id: PBO:0070962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 17","termid":"PBO:0070962"}


id: GO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium development","termid":"GO:0060429"}


id: GO:1903786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of glutathione biosynthetic process","synonyms":[{"name":"regulation of glutathione anabolism","type":"exact"},{"name":"regulation of glutathione biosynthesis","type":"exact"},{"name":"regulation of glutathione formation","type":"exact"},{"name":"regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903786"}


id: PBO:0040932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 3","termid":"PBO:0040932"}


id: PBO:0057354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-2","termid":"PBO:0057354"}


id: PBO:0064490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I and III subunit C","termid":"PBO:0064490"}


id: PBO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Val (TAC) 1-1","termid":"PBO:0061189"}


id: PBO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-6 (pseudogene)","termid":"PBO:0051121"}


id: GO:0014075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amine","synonyms":[{"name":"response to amine stimulus","type":"exact"}],"termid":"GO:0014075"}


id: GO:0016514
data:
  {"annotated_genes":["SJAG_01016","SJAG_00743","SJAG_00739","SJAG_02589","SJAG_02447","SJAG_01111","SJAG_02869","SJAG_02254","SJAG_03576","SJAG_05313","SJAG_04005","SJAG_00735"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83910,86810,89711,90216,90334,90350,90407,92091,103629,104655,109328,111187],"is_not":false,"summary":null,"term":"GO:0016514"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.","definition_xrefs":["GOC:bhm","PMID:12672490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_02254":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_02869":null,"SJAG_03576":null,"SJAG_04005":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"SWI/SNF complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SWI-SNF complex","type":"exact"}],"termid":"GO:0016514","terms_by_termid":{"GO:0016514":null}}


id: PBO:0091694
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdr1-Related Transcription factor","termid":"PBO:0091694"}


id: PBO:0060854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 2","termid":"PBO:0060854"}


id: PBO:0053360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-3, pseudogene","termid":"PBO:0053360"}


id: PBO:0082404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the oligosaccharyl transferase glycoprotein complex; required for N-linked glycosylation of proteins in the endoplasmic reticulum; human homolog DDOST can complement yeast growth defect during down-regulation of yeast gene","termid":"PBO:0082404"}


id: GO:0051420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to nebulette, a 107 kDa protein associated with the I-Z-I complex of cardiac myofibrils. It shows a high degree of homology with skeletal muscle nebulin.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete nebulette binding (obsolete GO:0051420)","synonyms":[{"name":"nebulette binding","type":"exact"}],"termid":"GO:0051420"}


id: PBO:0057128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 211","termid":"PBO:0057128"}


id: PBO:0054756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2167","termid":"PBO:0054756"}


id: GO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate = H2O + mesaconate.","definition_xrefs":["RHEA:13529","EC:4.2.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-2-methylmalate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03693","MetaCyc:S-2-METHYLMALATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"(+)-citramalate hydro-lyase activity","type":"related"},{"name":"(+)-citramalic hydro-lyase activity","type":"related"},{"name":"(S)-2-methylmalate hydro-lyase (2-methylfumarate-forming)","type":"related"},{"name":"(S)-2-methylmalate hydro-lyase activity","type":"related"},{"name":"L-citramalate hydrolase activity","type":"related"},{"name":"citramalate dehydratase activity","type":"related"},{"name":"mesaconase activity","type":"related"},{"name":"mesaconate hydratase activity","type":"related"},{"name":"mesaconate mesaconase activity","type":"related"}],"termid":"GO:0047510"}


id: PBO:0087443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit H of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087443"}


id: FYPO:0005239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular tyrosine level","synonyms":[{"name":"increased cellular L-tyrosine level","type":"exact"},{"name":"increased cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular tyrosine level during vegetative growth","type":"exact"},{"name":"increased tyrosine accumulation","type":"related"}],"termid":"FYPO:0005239"}


id: GO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of bilateral symmetry","synonyms":[{"name":"determination of bilateral asymmetry","type":"exact"}],"termid":"GO:0009855"}


id: PBO:0091918
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FrataXiN","termid":"PBO:0091918"}


id: PBO:0053201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0053201"}


id: PBO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricothiodystrophy disorder","termid":"PBO:0004218"}


id: PBO:0052381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 23","termid":"PBO:0052381"}


id: GO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"negatively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron differentiation","synonyms":[{"name":"down regulation of neuron differentiation","type":"exact"},{"name":"down-regulation of neuron differentiation","type":"exact"},{"name":"downregulation of neuron differentiation","type":"exact"},{"name":"inhibition of neuron differentiation","type":"narrow"}],"termid":"GO:0045665"}


id: MOD:01881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-valine residue by a free radical process effectively releasing a hydrogen molecule and forming 3-(L-phenylalan-2'-yl)-L-valine.","definition_xrefs":["PubMed:21596985","RESID:AA0565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(L-phenylalan-2'-yl)-L-valine","synonyms":[{"name":"(2S)-2-amino-4-(2-[(2S)-2-amino-2-carboxyethyl]phenyl)-3-methylbutanoic acid","type":"exact"},{"name":"3-(L-phenylalan-2'-yl)-L-valine","type":"exact"},{"name":"symerythrin valine-phenylalanine cross-link","type":"exact"}],"termid":"MOD:01881"}


id: PBO:0059307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L50 pseudogene 3","termid":"PBO:0059307"}


id: FYPO:0004445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane does not occur, and the protein is instead present in the plasma membrane, during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21832151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to prospore membrane","termid":"FYPO:0000677"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","synonyms":[{"name":"abolished protein localisation to prospore membrane during meiosis II with protein mislocalised to plasma membrane","type":"exact"},{"name":"abolished protein localization to forespore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"abolished protein localization to prospore membrane during second meiotic nuclear division with protein mislocalized to plasma membrane","type":"exact"},{"name":"abolished protein localization to prospore membrane with protein mislocalized to plasma membrane during meiosis II","type":"related"},{"name":"protein localization to prospore membrane abolished during meiosis II with protein mislocalized to plasma membrane","type":"exact"}],"termid":"FYPO:0004445"}


id: PBO:0072852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 2","termid":"PBO:0072852"}


id: PBO:0088621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase Hac1","termid":"PBO:0088621"}


id: GO:0046046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TTP, ribosylthymine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TTP metabolic process","synonyms":[{"name":"TTP metabolism","type":"exact"}],"termid":"GO:0046046"}


id: PR:O94348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIPF5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04686","PANTHER:PTHR21236:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.04c","secondary_identifiers":["UniProtKB:O94348"],"synonyms":[{"name":"Spom972h-YIPF5","type":"exact"}],"termid":"PR:O94348"}


id: GO:1904441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17646383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"regulation of Hurthle cell proliferation","type":"narrow"},{"name":"regulation of thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1904441"}


id: PBO:0044004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 3","termid":"PBO:0044004"}


id: GO:0061959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an (R)-carnitine stimulus.","definition_xrefs":["PMID:28102299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to (R)-carnitine","synonyms":[{"name":"response to L-carnitine","type":"exact"}],"termid":"GO:0061959"}


id: PBO:0004862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13 (predicted)","termid":"PBO:0004862"}


id: FYPO:0002381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal in centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002381"}


id: GO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxyamino)quinoline N-oxide + 2 NAD(P)+ + H2O = 4-nitroquinoline N-oxide + 2 NAD(P)H + 2 H+.","definition_xrefs":["EC:1.7.1.9","MetaCyc:1.7.1.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitroquinoline-N-oxide reductase activity","synonyms":[{"name":"4-(hydroxyamino)quinoline N-oxide:NADP+ oxidoreductase activity","type":"related"},{"name":"4-nitroquinoline 1-oxide reductase activity","type":"related"},{"name":"4NQO reductase activity","type":"related"},{"name":"NAD(P)H2:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"},{"name":"NAD(P)H:4-nitroquinoline-N-oxide oxidoreductase activity","type":"related"}],"termid":"GO:0050465"}


id: PATO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001012 relative intensity value (obsolete PATO:0001012)","termid":"PATO:0001012"}


id: GO:0046095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyinosine, hypoxanthine deoxyriboside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyinosine metabolic process","termid":"GO:0046094"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyinosine biosynthetic process","synonyms":[{"name":"deoxyinosine anabolism","type":"exact"},{"name":"deoxyinosine biosynthesis","type":"exact"},{"name":"deoxyinosine formation","type":"exact"},{"name":"deoxyinosine synthesis","type":"exact"}],"termid":"GO:0046095"}


id: GO:0120032
data:
  {"annotated_genes":["SJAG_00514","SJAG_04509","SJAG_02379","SJAG_03453","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87065,86095,107556,89683,84147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120032","terms_by_termid":{"GO:1902917":null}}


id: PBO:0030377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_diamide","termid":"PBO:0030377"}


id: PBO:0065640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 18","termid":"PBO:0065640"}


id: PBO:0040786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 3","termid":"PBO:0040786"}


id: GO:0106264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: GTP + L-seryl-[protein] = GDP + H+ + O-phospho-L-seryl-[protein].","definition_xrefs":["RHEA:64020","GOC:sp","PMID:32322062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0004672","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein serine kinase activity (using GTP as donor)","termid":"GO:0106264"}


id: PBO:0067576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 733, pseudogene","termid":"PBO:0067576"}


id: GO:0035730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to S-nitrosoglutathione, a nitrosothiol considered to be a natural nitric oxide (NO) donor involved in S-nitrosylation, and in the storage and transport of nitric oxide in biological systems.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"S-nitrosoglutathione binding","synonyms":[{"name":"GSNO binding","type":"exact"}],"termid":"GO:0035730"}


id: PBO:0085993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for survival upon exposure to K1 killer toxin; proposed to regulate double-strand break repair via non-homologous end-joining","termid":"PBO:0085993"}


id: FYPO:0001050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis at the same size as wild type.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe, normal size cell (obsolete FYPO:0001050)","synonyms":[{"name":"mitotic catastrophe, normal size cell during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe, normal size cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001050"}


id: MOD:00982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-selenocysteine (not known as a natural post-translational modification process).","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-selenocysteine residue","termid":"MOD:00031"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteine (Ser)","synonyms":[{"name":"Sec(Ser)","type":"exact"},{"name":"Selenocysteine (from Serine)","type":"exact"}],"termid":"MOD:00982"}


id: PBO:0058128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4430","termid":"PBO:0058128"}


id: PR:Q09786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.08 gene.","definition_xrefs":["UniProtKB:Q09786","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C13G6.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.08","synonyms":[{"name":"Spom972h-SPAC13G6.08","type":"exact"}],"termid":"PR:Q09786"}


id: GO:0008614
data:
  {"annotated_genes":["SJAG_00691","SJAG_01881","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89026],"is_not":false,"summary":null,"term":"GO:0008614"},{"annotations":[83978,91699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00691":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006773"],"synonyms":[{"name":"pyridoxine metabolism","type":"exact"}],"termid":"GO:0008614","terms_by_termid":{"GO:0008614":null,"GO:0008615":null}}


id: MOD:00374
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 3,4-dihydroxy-L-arginine.","definition_xrefs":["PubMed:10978343","ChEBI:141829","Unimod:425#R","PubMed:12686488","RESID:AA0369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-L-arginine","synonyms":[{"name":"(2S,3Xi,4Xi)-2-amino-5-carbamimidamido-3,4-dihydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-guanidino-3,4-dihydroxypentanoic acid","type":"exact"},{"name":"3,4-dihydroxy-L-arginine","type":"exact"},{"name":"3,4-dihydroxylated L-arginine","type":"exact"},{"name":"34Hy2Arg","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 3,4-dihydroxyarginine","type":"exact"},{"name":"beta,gamma-dihydroxyarginine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00374"}


id: PBO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase superfamily member 1","termid":"PBO:0046329"}


id: PBO:0067676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 861, pseudogene","termid":"PBO:0067676"}


id: PBO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confirmed intron","termid":"PBO:0006379"}


id: GO:1901341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of store-operated calcium channel activity","synonyms":[{"name":"activation of store-operated calcium channel activity","type":"narrow"},{"name":"up regulation of store-operated calcium channel activity","type":"exact"},{"name":"up-regulation of store-operated calcium channel activity","type":"exact"},{"name":"upregulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:1901341"}


id: PBO:0053404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 334","termid":"PBO:0053404"}


id: PATO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, invasive","termid":"PATO:0002129"}


id: GO:0097003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an adipokinetic hormone to initiate a change in cell activity. Adipokinetic hormones (AKHs) are protein or peptide hormones that are important for sugar and fat homeostasis in metazoa. In insects, they mobilize sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["PMID:11904407","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adipokinetic hormone receptor activity","synonyms":[{"name":"AKH receptor activity","type":"exact"}],"termid":"GO:0097003"}


id: GO:0100052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates G1/S transition of mitotic cell cycle.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by transcription from RNA polymerase II promoter (obsolete GO:0100052)","termid":"GO:0100052"}


id: PR:O13947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial tRNA-specific 2-thiouridylase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11933:SF0","OMA:SCHPO00647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.04","secondary_identifiers":["UniProtKB:O13947"],"synonyms":[{"name":"Spom972h-TRMU","type":"exact"}],"termid":"PR:O13947"}


id: PR:O74481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi5 gene.","definition_xrefs":["UniProtKB:O74481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.08c","synonyms":[{"name":"Spom972h-pdi5","type":"exact"}],"termid":"PR:O74481"}


id: GO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an substrate by the conjugation of glucuronic acid to form an acyl-glucuronide (also called an acyl-glucuronoside).","definition_xrefs":["GOC:vk","PMID:22294686","GOC:BHF","PMID:12485951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acyl glucuronidation","termid":"GO:0036236"}


id: GO:0015791
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94245,88775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of polyols, any polyhydric alcohol, across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"polyol transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015791","terms_by_termid":{"GO:1904679":null}}


id: PR:Q65ZA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctf8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q65ZA6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.11c","synonyms":[{"name":"Spom972h-ctf8","type":"exact"}],"termid":"PR:Q65ZA6"}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["GOC:cab1","WB_REF:cgc467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: PBO:0038825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 32","termid":"PBO:0038825"}


id: PBO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type (zinc knuckle)","termid":"PBO:0000623"}


id: PBO:0089295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mannosidase Mnl1","termid":"PBO:0089295"}


id: GO:0030598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the N-glycosylic bond at A-4324 in 28S rRNA from rat ribosomes or corresponding sites in 28S RNA from other species.","definition_xrefs":["GOC:mah","EC:3.2.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA glycosylase activity","termid":"GO:0030597"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a rRNA","termid":"GO:0140102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"rRNA N-glycosylase activity","secondary_identifiers":["MetaCyc:3.2.2.22-RXN"],"synonyms":[{"name":"RNA N-glycosidase activity","type":"related"},{"name":"gelonin","type":"related"},{"name":"mirabilis antiviral protein","type":"related"},{"name":"momorcochin-S","type":"related"},{"name":"nigrin b","type":"related"},{"name":"rRNA N-glycohydrolase activity","type":"related"},{"name":"rRNA N-glycosidase activity","type":"exact"},{"name":"ribosomal ribonucleate N-glycosidase activity","type":"related"},{"name":"ricin","type":"related"},{"name":"saporins","type":"related"}],"termid":"GO:0030598"}


id: GO:0140225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has DNA topoisomerase type I and RNA topoisomerase activities.","definition_xrefs":["PMID:23912945","GOC:lnp","PMID:28176834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA topoisomerase III-beta-TDRD3 complex","synonyms":[{"name":"Top3-beta-TDRD3 complex","type":"exact"}],"termid":"GO:0140225"}


id: PBO:0079256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 28","termid":"PBO:0079256"}


id: PBO:0038838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 8","termid":"PBO:0038838"}


id: GO:0099605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency of action potentials in a spike train.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing rate","termid":"GO:0099605"}


id: PBO:0081494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF385D antisense RNA 2","termid":"PBO:0081494"}


id: GO:0102522
data:
  {"annotated_genes":["SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94270],"is_not":false,"summary":null,"term":"GO:0102522"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 4-demethylwyosine37 in tRNAPhe = 5'-S-methyl-5'-thioadenosine + H+ + 7-[(3S)-3-amino-3-carboxypropyl]-4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["EC:2.5.1.114","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140101","GO:0016765","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14518","RHEA:36355"],"termid":"GO:0102522","terms_by_termid":{"GO:0102522":null}}


id: FYPO:0007382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a transcription regulatory region by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-stranded DNA binding","termid":"FYPO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal transcription regulatory region sequence-specific DNA binding","synonyms":[{"name":"normal promoter binding","type":"related"},{"name":"normal sequence-specific DNA binding at transcription regulatory region","type":"exact"},{"name":"normal transcription regulatory region binding","type":"exact"}],"termid":"FYPO:0007382"}


id: GO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle.","definition_xrefs":["NIF_Subcellular:sao1299635018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell contact zone","synonyms":[{"name":"cell cell contact zone","type":"exact"}],"termid":"GO:0044291"}


id: PBO:0064830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R9A antisense RNA 1","termid":"PBO:0064830"}


id: FYPO:0002253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal septum location","synonyms":[{"name":"normal septum location during mitotic cell cycle","type":"related"},{"name":"normal septum location during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"},{"name":"normally localized septum","type":"exact"}],"termid":"FYPO:0002253"}


id: PBO:0058642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6771","termid":"PBO:0058642"}


id: PBO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid27 family protein","termid":"PBO:0003228"}


id: PBO:0059183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin pseudogene 1","termid":"PBO:0059183"}


id: PR:Q10153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDP-diacylglycerol--inositol 3-phosphatidyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15362:SF2","PRO:DNx","OMA:SCHPO00257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.08","secondary_identifiers":["UniProtKB:Q10153"],"synonyms":[{"name":"PI synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDIPT","type":"exact"},{"name":"phosphatidylinositol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10153"}


id: PBO:0091402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12","termid":"PBO:0091402"}


id: GO:0052890
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a flavin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.8.-"],"termid":"GO:0052890","terms_by_termid":{"GO:0003860":null}}


id: PBO:0089886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family protein, RNA polymerase I termination factor Eta2","termid":"PBO:0089886"}


id: PBO:0043705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 2","termid":"PBO:0043705"}


id: PBO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 15","termid":"PBO:0072138"}


id: PBO:0044491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1","termid":"PBO:0044491"}


id: GO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeletal joints over time, from formation to mature structure.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system development","termid":"GO:0048706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal joint development","termid":"GO:0072498"}


id: PBO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17 (predicted)","termid":"PBO:0002855"}


id: PBO:0055705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 1","termid":"PBO:0055705"}


id: GO:0036455
data:
  {"annotated_genes":["SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114006],"is_not":false,"summary":null,"term":"GO:0036455"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a iron-sulfur cluster from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03701":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"iron-sulfur transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2564828"],"synonyms":[{"name":"Fe-S transferase activity","type":"exact"}],"termid":"GO:0036455","terms_by_termid":{"GO:0036455":null}}


id: GO:0033554
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id: GO:0030767
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id: GO:0061318
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id: PBO:0034534
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id: PR:P78773
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id: GO:0106029
data:
  {"annotated_genes":["SJAG_02978","SJAG_03572","SJAG_04065","SJAG_00088","SJAG_00319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90859,108685,110485],"is_not":false,"summary":null,"term":"GO:0106029"},{"annotations":[102413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[98677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA uridine = tRNA pseudouridine. Conversion of uridine in a tRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["PMID:11095668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140101","GO:0016853","GO:0140098"],"is_obsolete":false,"name":"tRNA pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:54572"],"synonyms":[{"name":"tRNA-pseudouridine synthase activity","type":"exact"},{"name":"tRNA-uridine isomerase activity","type":"exact"},{"name":"tRNA-uridine uracilmutase activity","type":"exact"},{"name":"transfer RNA pseudouridine synthetase activity","type":"exact"},{"name":"transfer ribonucleate pseudouridine synthetase activity","type":"exact"}],"termid":"GO:0106029","terms_by_termid":{"GO:0106029":null,"GO:0160148":null,"GO:0160150":null}}


id: PBO:0045366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 2","termid":"PBO:0045366"}


id: GO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:ejs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal ganglion cell axon guidance","synonyms":[{"name":"retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:0031290"}


id: PR:O59727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein PBDC1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.07c","synonyms":[{"name":"Spom972h-SPBC3E7.07c","type":"exact"}],"termid":"PR:O59727"}


id: GO:1903706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemopoiesis.","definition_xrefs":["GO_REF:0000058","PMID:20080761","GOC:PARL","GOC:TermGenie","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemopoiesis","synonyms":[{"name":"regulation of blood cell biosynthesis","type":"exact"},{"name":"regulation of blood cell formation","type":"exact"},{"name":"regulation of haemopoiesis","type":"exact"},{"name":"regulation of hematopoiesis","type":"exact"}],"termid":"GO:1903706"}


id: PBO:0084962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myosin-like protein associated with the nuclear envelope; nuclear basket protein that connects the nuclear pore complex with the nuclear interior; involved in the Tel1p pathway that controls telomere length; MLP2 has a paralog, MLP1, that arose from the whole genome duplication","termid":"PBO:0084962"}


id: GO:0007338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The union of male and female gametes to form a zygote.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single fertilization","synonyms":[{"name":"zygote biosynthesis","type":"related"},{"name":"zygote formation","type":"related"}],"termid":"GO:0007338"}


id: PBO:0085666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleolar integrity and processing of pre-rRNA; has a role in processing rRNA for the 60S ribosome subunit; transcript is induced in response to cytotoxic stress but not genotoxic stress; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085666"}


id: PBO:0083508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CDC7/YDL153C, the catalytic subunit of a complex that regulates DNA replication","termid":"PBO:0083508"}


id: PBO:0038986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 2C","termid":"PBO:0038986"}


id: PBO:0066338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC2 antisense RNA 1","termid":"PBO:0066338"}


id: PBO:0084548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the quinone oxidoreductase family; up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine","termid":"PBO:0084548"}


id: PBO:0041002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORA aurora kinase A activator","termid":"PBO:0041002"}


id: GO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"negatively_regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephros development","termid":"GO:0061218"}


id: PBO:0067874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 176","termid":"PBO:0067874"}


id: PBO:0087814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetra-spanning membrane protein found mostly in the late Golgi; non-essential; can suppress some sed5 alleles; may be part of the transport machinery, but precise function is unknown; similar to mammalian syntaxin 5","termid":"PBO:0087814"}


id: SO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an mRNA sequence that has been reprogrammed at translation, causing localized alterations.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded","termid":"SO:0000881"}


id: PBO:0064837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12A","termid":"PBO:0064837"}


id: GO:2001168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2B ubiquitination (obsolete GO:2001168)","termid":"GO:2001168"}


id: GO:0090394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"negatively_regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of excitatory postsynaptic potential","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of excitatory post-synaptic membrane potential","type":"exact"},{"name":"reduction of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:0090394"}


id: PR:000027621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 ubiquitinated form in Schizosaccharomyces pombe. Ubiquitinated by SCF(Pof1). Example: UniProtKB:Q10424-1, MOD:01148.","definition_xrefs":["PomBase:MAH","PMID:15660136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 ubiquitinated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UbiqLys+","type":"exact"}],"termid":"PR:000027621"}


id: GO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stretch of less tightly packed chromatin along the polytene chromosome, found between bands.","definition_xrefs":["GOC:bf","PMID:11361342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome interband","termid":"GO:0005705"}


id: GO:0072370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an phosphate group to a serine residue at position 121 of the histone.","definition_xrefs":["PMID:19965387","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-S121 phosphorylation (obsolete GO:0072370)","synonyms":[{"name":"histone H2A phosphorylation at S121","type":"exact"},{"name":"histone H2AS121 phosphorylation","type":"exact"}],"termid":"GO:0072370"}


id: PBO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 168","termid":"PBO:0075119"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: PR:Q09749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adiponectin receptor protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03283","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIPOR-like receptor SPBC12C2.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.09c","secondary_identifiers":["UniProtKB:Q09749"],"synonyms":[{"name":"Spom972h-ADIPOR2","type":"exact"}],"termid":"PR:Q09749"}


id: GO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein light chain (obsolete GO:0001690)","synonyms":[{"name":"cytoplasmic dynein light chain","type":"exact"}],"termid":"GO:0001690"}


id: PBO:0069172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 425, pseudogene","termid":"PBO:0069172"}


id: FYPO:0007071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during anaphase a.","definition_xrefs":["PomBase:mah","PMID:31427431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during anaphase A","synonyms":[{"name":"increased rate of mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"increased rate of mitotic spindle elongation during mitotic anaphase A","type":"exact"},{"name":"increased rate of mitotic spindle extension during anaphase A","type":"exact"},{"name":"increased rate of spindle elongation during anaphase A of mitosis","type":"exact"}],"termid":"FYPO:0007071"}


id: PBO:0045793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation enhancing alpha-mannosidase like protein 3","termid":"PBO:0045793"}


id: GO:0070335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to aspartate, the alpha-amino-acid anion of 2-aminobutanedioic acid that has formula C4H5NO4.","definition_xrefs":["CHEBI:29995","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"aspartate binding","synonyms":[{"name":"aspartic acid binding","type":"exact"}],"termid":"GO:0070335"}


id: PBO:0079775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UGDH antisense RNA 1","termid":"PBO:0079775"}


id: GO:1900207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:9758706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"},{"relation_name":"negatively_regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pronephric nephron tubule development","synonyms":[{"name":"down regulation of pronephric nephron tubule development","type":"exact"},{"name":"down-regulation of pronephric nephron tubule development","type":"exact"},{"name":"downregulation of pronephric nephron tubule development","type":"exact"},{"name":"inhibition of pronephric nephron tubule development","type":"narrow"}],"termid":"GO:1900207"}


id: GO:1904059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of locomotor rhythm.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16310969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"locomotor rhythm","termid":"GO:0045475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of locomotor rhythm","synonyms":[{"name":"regulation of circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:1904059"}


id: PATO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000532 micronutrient sensitivity value (obsolete PATO:0000532)","termid":"PATO:0000532"}


id: PBO:0036529
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript","termid":"PBO:0036529"}


id: PBO:0084169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved SUMO E3 ligase subunit of SMC5-SMC6 complex; required for anchoring dsDNA breaks to the nuclear periphery; SMC5-SMC6 plays a key role in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; required for efficient sister chromatid cohesion; mutants are sensitive to MMS, show increased spontaneous mutation and mitotic recombination; SUMOylates and inhibits Snf1p function; supports nucleolar function","termid":"PBO:0084169"}


id: GO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of norepinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal noradrenaline","type":"exact"}],"termid":"GO:0003118"}


id: PR:Q10178-3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-3.","definition_xrefs":["UniProtKB:Q10178","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.03c","secondary_identifiers":["UniProtKB:Q10178-3"],"synonyms":[{"name":"Spom972h-SF3B1/iso:E","type":"exact"}],"termid":"PR:Q10178-3"}


id: PBO:0016889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug121","termid":"PBO:0016889"}


id: PBO:0065987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Raf-1 proto-oncogene, serine/threonine kinase","termid":"PBO:0065987"}


id: PBO:0031352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_respiration","termid":"PBO:0031352"}


id: PBO:0010271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin Hnt3","termid":"PBO:0010271"}


id: PBO:0110100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tbasic amino acid ransmembrane transporter","termid":"PBO:0110100"}


id: PBO:0044837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 125","termid":"PBO:0044837"}


id: GO:0005701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region at which the centric regions of polytene chromosomes are joined together.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromocenter","termid":"GO:0010369"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome chromocenter","synonyms":[{"name":"polytene chromosome chromocentre","type":"exact"}],"termid":"GO:0005701"}


id: PBO:0081276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 43","termid":"PBO:0081276"}


id: PBO:0091999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1 Rpp103","termid":"PBO:0091999"}


id: GO:0072173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric tubule are generated and organized from an epithelium. A metanephric tubule is an epithelial tube that is part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"metanephric tubule development","termid":"GO:0072170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule morphogenesis","termid":"GO:0072173"}


id: PBO:0063047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALM2 and AKAP2 fusion","termid":"PBO:0063047"}


id: FYPO:0003602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is abolished.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abolished mRNA splicing, via spliceosome","synonyms":[{"name":"abolished mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abolished mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abolished nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"abolished splicing","type":"broad"},{"name":"mRNA splicing via spliceosome abolished","type":"exact"}],"termid":"FYPO:0003602"}


id: PATO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing excess lipid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty","termid":"PATO:0002114"}


id: PR:O14044
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein PNO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein pno1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.11c","secondary_identifiers":["UniProtKB:O14044"],"synonyms":[{"name":"Spom972h-PNO1","type":"exact"},{"name":"ribosomal RNA-processing protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14044"}


id: PBO:0039027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3","termid":"PBO:0039027"}


id: GO:0042454
data:
  {"annotated_genes":["SJAG_03771","SJAG_01673","SJAG_02580","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83834,83835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[104570,85429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any ribonucleoside, a nucleoside in which purine or pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside catabolism","type":"exact"},{"name":"ribonucleoside degradation","type":"exact"},{"name":"ribonucleoside breakdown","type":"exact"}],"termid":"GO:0042454","terms_by_termid":{"GO:0006154":null,"GO:0009972":null}}


id: PBO:0052174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK4-CATSPERZ readthrough (NMD candidate)","termid":"PBO:0052174"}


id: PR:O42971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03073","PANTHER:PTHR12936:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.01","secondary_identifiers":["UniProtKB:O42971"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC10","type":"exact"}],"termid":"PR:O42971"}


id: PBO:0079076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-4","termid":"PBO:0079076"}


id: PBO:0077891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein","termid":"PBO:0077891"}


id: PBO:0056649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 16","termid":"PBO:0056649"}


id: PBO:0091100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8","termid":"PBO:0091100"}


id: GO:0039682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of unidirectional viral DNA replication that takes place on a circular DNA to rapidly produce numerous copies of the viral genome. Involves creating a nick in one strand of the circular DNA molecule at the origin of replication. DNA is then synthesized by DNA polymerase. Using the non-nicked strand as a template, replication proceeds around the circular DNA molecule, displacing the nicked strand as single-stranded DNA.","definition_xrefs":["GOC:bf","GOC:jl","VZ:915","Wikipedia:Rolling_circle_replication"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA strand displacement replication","termid":"GO:0039687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"rolling circle viral DNA replication","termid":"GO:0039682"}


id: PBO:0029832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_vegetative_cell","termid":"PBO:0029832"}


id: PBO:0087139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that binds specific mRNAs and interacts with She3p; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud; binds to ER-derived membranes and targets mRNAs to cortical ER","termid":"PBO:0087139"}


id: PR:Q9P6Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enolase-phosphatase E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01125","PANTHER:PTHR20371:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase-phosphatase E1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.08","secondary_identifiers":["UniProtKB:Q9P6Q2"],"synonyms":[{"name":"2,3-diketo-5-methylthio-1-phosphopentane phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ENOPH1","type":"exact"}],"termid":"PR:Q9P6Q2"}


id: GO:0061702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic protein complex that is capable of activating caspase-1.","definition_xrefs":["GOC:dph","PMID:17599095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"canonical inflammasome complex","termid":"GO:0061702"}


id: PBO:0087209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which dimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 613 and methylates EF3 (Yef3p) at lysine 187; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; involved in regulation of translational termination; predicted involvement in ribosome biogenesis","termid":"PBO:0087209"}


id: GO:0110055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament annealing, i.e. the end-to-end joining of existing actin filaments.","definition_xrefs":["GOC:mah","PMID:15743909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament annealing","termid":"GO:0110054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of actin filament annealing","termid":"GO:0110055"}


id: PR:Q9C0X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18E5.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.14c","synonyms":[{"name":"Spom972h-SPBC18E5.14c","type":"exact"}],"termid":"PR:Q9C0X1"}


id: PBO:0053486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 461","termid":"PBO:0053486"}


id: PBO:0077042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis associated oncogenic lncRNA","termid":"PBO:0077042"}


id: GO:0005871
data:
  {"annotated_genes":["SJAG_01546","SJAG_01613","SJAG_01297","SJAG_00930","SJAG_00332","SJAG_00773","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85188,87353,92957,99725],"is_not":false,"summary":null,"term":"GO:0005871"},{"annotations":[100072,104437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016938"},{"annotations":[95398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005872"},{"annotations":[104445,100080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00332":null,"SJAG_00773":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005871","terms_by_termid":{"GO:0005871":null,"GO:0005872":null,"GO:0005873":null,"GO:0016938":null}}


id: GO:0017120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of phosphatidylinositol-3-phosphate, phosphatidylinositol-4-phosphate, and phosphatidylinositol-3,5-bisphosphate, but not PI-4,5-bisphosphate, to phosphatidylinositol; PPIPase activity is a key regulator of membrane trafficking and actin cytoskeleton organization.","definition_xrefs":["PMID:10224048"],"gene_count":0,"genotype_count":0,"name":"obsolete polyphosphatidylinositol phosphatase activity (obsolete GO:0017120)","synonyms":[{"name":"polyphosphatidylinositol phosphatase activity","type":"exact"},{"name":"polyphosphoinositide phosphatase activity","type":"exact"}],"termid":"GO:0017120"}


id: PBO:0084565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane glycoprotein v-SNARE; involved in retrograde transport from the Golgi to the endoplasmic reticulum (ER); required for N- and O-glycosylation in the Golgi but not in the ER and for efficient nuclear fusion during mating; mediates Sey1p-independent homotypic ER fusion; interacts with the Dsl1p complex through Tip20p","termid":"PBO:0084565"}


id: SO:1000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby a transposition occurred within a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"has_part","term_name":"duplication","termid":"SO:1000035"},{"relation_name":"is_a","term_name":"chromosomal_transposition","termid":"SO:0000453"},{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)Tp","type":"related"},{"name":"intrachromosomal transposition","type":"exact"}],"termid":"SO:1000041"}


id: PBO:0088381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase (glutamine hydrolysing)","termid":"PBO:0088381"}


id: GO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the lectin pathway of complement activation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, lectin pathway","synonyms":[{"name":"regulation of complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001868"}


id: PBO:0027667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing","termid":"PBO:0027667"}


id: PATO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being short and wide and tapered distally.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullet-shaped","termid":"PATO:0002087"}


id: FYPO:0007223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment of chromatin silencing at centromere outer repeat regions is decreased.","definition_xrefs":["PMID:31822915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased establishment of chromatin silencing at centromere outer repeat region","synonyms":[{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"reduced establishment of chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007223"}


id: PATO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000987 relative consistency (obsolete PATO:0000987)","termid":"PATO:0000987"}


id: GO:0033787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cob(I)alamin + hydrogen cyanide + NADP+ = cyanocob(III)alamin + H+ + NADPH.","definition_xrefs":["RHEA:16113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cyanocobalamin reductase (cyanide-eliminating) activity","secondary_identifiers":["EC:1.16.1.6","MetaCyc:1.6.99.12-RXN","Reactome:R-HSA-3149519","KEGG_REACTION:R02999"],"synonyms":[{"name":"NADPH2:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"NADPH:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"cob(I)alamin, cyanide:NADP+ oxidoreductase activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH, cyanide-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH; CN-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase activity","type":"related"}],"termid":"GO:0033787"}


id: PBO:0016546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, potassium exporting Cta3","termid":"PBO:0016546"}


id: PBO:0038557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 18","termid":"PBO:0038557"}


id: GO:0102339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxyicosanoyl-CoA(4-) + NADP(3-) = 3-oxoicosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-arachidoyl-CoA reductase activity (obsolete GO:0102339)","termid":"GO:0102339"}


id: PBO:0084566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane peroxin of the peroxisomal importomer complex; complex facilitates the import of peroxisomal matrix proteins; required for peroxisome biogenesis","termid":"PBO:0084566"}


id: PBO:0045518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death domain containing 1","termid":"PBO:0045518"}


id: FYPO:0007556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diethylstilbestrol. Cells stop growing (and may die) at a concentration of diethylstilbestrol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:33223513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to diethylstilbestrol","synonyms":[{"name":"hypersensitive to diethylstilbestrol","type":"exact"},{"name":"sensitive to DES","type":"exact"},{"name":"sensitive to diethylstilbestrol during mitotic cell cycle","type":"related"},{"name":"sensitive to diethylstilbestrol during vegetative growth","type":"exact"}],"termid":"FYPO:0007556"}


id: PBO:0045801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin receptor type B","termid":"PBO:0045801"}


id: PBO:0072299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 17","termid":"PBO:0072299"}


id: PBO:0080350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 2 pseudogene","termid":"PBO:0080350"}


id: GO:0022859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of a solute by a channel that opens in response to dephosphorylation of one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete dephosphorylation-gated channel activity (obsolete GO:0022859)","termid":"GO:0022859"}


id: PBO:0057188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 346","termid":"PBO:0057188"}


id: PBO:0081699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 621","termid":"PBO:0081699"}


id: PBO:0030667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_27S_rRNA_precursor_level","termid":"PBO:0030667"}


id: PBO:0075938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain","termid":"PBO:0075938"}


id: GO:0047894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin = adenosine 3',5'-diphosphate + H+ + quercetin 3-sulfate.","definition_xrefs":["RHEA:13453","EC:2.8.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"flavonol 3-sulfotransferase activity","secondary_identifiers":["MetaCyc:FLAVONOL-3-SULFOTRANSFERASE-RXN","KEGG_REACTION:R02159"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin 3-sulfotransferase activity","type":"exact"},{"name":"flavonol 3-sulphotransferase activity","type":"exact"}],"termid":"GO:0047894"}


id: GO:0019653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0055086","GO:0006091"],"is_obsolete":false,"name":"anaerobic purine nucleobase catabolic process","secondary_identifiers":["MetaCyc:P164-PWY","MetaCyc:PWY-5497","MetaCyc:PWY-5044"],"synonyms":[{"name":"anaerobic purine base catabolic process","type":"exact"},{"name":"anaerobic purine base catabolism","type":"exact"},{"name":"anaerobic purine catabolic process","type":"related"},{"name":"purine base fermentation","type":"exact"},{"name":"purine fermentation","type":"related"}],"termid":"GO:0019653"}


id: PBO:0079971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 9","termid":"PBO:0079971"}


id: MOD:00301
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylglucosamine-1-phosphoryl)-L-serine.","definition_xrefs":["DeltaMass:0","Unimod:428","PubMed:6438439","PubMed:8631906","RESID:AA0296","PubMed:6993483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"glycosylphosphorylated residue","termid":"MOD:01804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[([(2-acetamido-2-deoxy-alpha-D-glucopyranosyl)oxy][hydroxy]phosphoryl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAcP) serine","type":"exact"},{"name":"N-acetylglucosamine-1-phosphoryl","type":"related"},{"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-GlcNAc-1-phosphorylation (of Serine)","type":"exact"},{"name":"O-beta(N-acetyl-glucosamine-alpha1-phosphate)serine","type":"exact"},{"name":"O3-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O3-L-serine 2-(acetylamino)-2-deoxy-D-glucopyranose 1-phosphodiester","type":"exact"},{"name":"PhosphoHexNAc","type":"related"}],"termid":"MOD:00301"}


id: PBO:0004340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dienelactone hydrolase family (predicted)","termid":"PBO:0004340"}


id: GO:0007021
data:
  {"annotated_genes":["SJAG_02270","SJAG_02040","SJAG_03463","SJAG_00983","SJAG_01526","SJAG_01545","SJAG_02672","SJAG_04074","SJAG_00505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84837,89458,89696,92753,92956,93705,96746,98633,102426],"is_not":false,"summary":null,"term":"GO:0007021"}]},"cv_name":"biological_process","definition":"The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00505":null,"SJAG_00983":null,"SJAG_01526":null,"SJAG_01545":null,"SJAG_02040":null,"SJAG_02270":null,"SJAG_02672":null,"SJAG_03463":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"tubulin complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tubulin assembly","type":"exact"},{"name":"tubulin folding","type":"related"},{"name":"tubulin-specific chaperone activity","type":"related"}],"termid":"GO:0007021","terms_by_termid":{"GO:0007021":null}}


id: GO:0033403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"UUA codon-amino acid adaptor activity","synonyms":[{"name":"TTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033403"}


id: PBO:0039278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 7, pseudogene","termid":"PBO:0039278"}


id: GO:0033119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"negatively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA splicing","termid":"GO:0033119"}


id: PBO:0077154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 4","termid":"PBO:0077154"}


id: PBO:0049031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 18","termid":"PBO:0049031"}


id: PBO:0087080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L41B; comprises only 25 amino acids; rpl41a rpl41b double null mutant is viable; homologous to mammalian ribosomal protein L41, no bacterial homolog; RPL41B has a paralog, RPL41A, that arose from the whole genome duplication","termid":"PBO:0087080"}


id: PBO:0081760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 691","termid":"PBO:0081760"}


id: PBO:0086186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine kinase; required for vesicle formation in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; structurally required for phagophore assembly site formation; forms a complex with Atg13p and Atg17p during autophagy; required for re-phosphorylation of Atg13p during termination of autophagy, following prolonged nitrogen starvation; essential for cell cycle progression from G2/M to G1 under nitrogen starvation","termid":"PBO:0086186"}


id: PBO:0080757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xg glycoprotein (Xg blood group)","termid":"PBO:0080757"}


id: PBO:0027901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spliced_cen-dg_RNA_level","termid":"PBO:0027901"}


id: PBO:0052250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 19","termid":"PBO:0052250"}


id: GO:1904847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell chemotaxis to fibroblast growth factor.","definition_xrefs":["PMID:23233752","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"}


id: FYPO:0000997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear when the cell is subject to nitrogen starvation. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped cell","termid":"FYPO:0000020"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"pear-shaped cell during nitrogen starvation","synonyms":[{"name":"cell morphology, pear shaped during nitrogen starvation","type":"exact"},{"name":"ice cream cone-shaped cell during nitrogen starvation","type":"exact"},{"name":"pear-shaped cell during nitrogen depletion","type":"exact"},{"name":"pear-shaped cell during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000997"}


id: PBO:0063381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 1 ligand 2","termid":"PBO:0063381"}


id: PBO:0031112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pleiotropic_effects_(obsolete_FYPO:0000261)","termid":"PBO:0031112"}


id: PBO:0056476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 2","termid":"PBO:0056476"}


id: GO:0007427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells during development of an open tracheal system. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration, open tracheal system","synonyms":[{"name":"tracheal cell migration","type":"broad"},{"name":"tracheal epithelial cell migration","type":"related"}],"termid":"GO:0007427"}


id: PBO:0041675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM2 antisense RNA 1","termid":"PBO:0041675"}


id: PBO:0082680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; ESCRT-I is involved in ubiquitin-dependent sorting of proteins into the endosome; suppressor of rna1-1 mutation; may be involved in RNA export from nucleus","termid":"PBO:0082680"}


id: GO:0000182
data:
  {"annotated_genes":["SJAG_03354","SJAG_03905","SJAG_04527","SJAG_00247","SJAG_04855","SJAG_04766","SJAG_00883","SJAG_05253"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91610,98362,99098,99540,103426],"is_not":false,"summary":null,"term":"GO:0000182"},{"annotations":[111205,98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[98465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[95760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a DNA sequence encoding a ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00883":null,"SJAG_03354":null,"SJAG_03905":null,"SJAG_04527":null,"SJAG_04766":null,"SJAG_04855":null,"SJAG_05253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"rDNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal DNA binding","type":"exact"}],"termid":"GO:0000182","terms_by_termid":{"GO:0000182":null,"GO:0001002":null,"GO:0043110":null,"GO:0110035":null}}


id: PBO:0060468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-protein coding RNA, associated with MAP kinase pathway and growth arrest","termid":"PBO:0060468"}


id: PBO:0049328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 2","termid":"PBO:0049328"}


id: GO:0072318
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86524],"is_not":false,"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"The disaggregation of a clathrin coat into its constituent components; results in stripping or removing the clathrin coat from clathrin-coated vesicles (CCV) before fusing with their targets. CVVs transport cargo from plasma membrane and trans-Golgi to the endosomal system.","definition_xrefs":["PMID:11146663","PMID:8524399","PMID:11084334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"clathrin coat disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin-coat disassembly","type":"exact"},{"name":"clathrin-coat uncoating","type":"exact"},{"name":"clathrin-coated vesicle uncoating","type":"exact"}],"termid":"GO:0072318","terms_by_termid":{"GO:0072318":null}}


id: PBO:0061578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM antisense RNA 1","termid":"PBO:0061578"}


id: PBO:0051172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-60 (pseudogene)","termid":"PBO:0051172"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: PR:P22194
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1 regulatory subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01073","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit SDS22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.12c","secondary_identifiers":["UniProtKB:P22194"],"synonyms":[{"name":"Spom972h-PPP1R7","type":"exact"}],"termid":"PR:P22194"}


id: PBO:0078486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 6-1","termid":"PBO:0078486"}


id: PBO:0045149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 7","termid":"PBO:0045149"}


id: PBO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPPDE peptidase family (predicted)","termid":"PBO:0002671"}


id: PBO:0083149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF PEA2/YER149C","termid":"PBO:0083149"}


id: FYPO:0004469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal phosphatase activity","termid":"FYPO:0004469"}


id: PBO:0073665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal induced proliferation associated 1 like 1","termid":"PBO:0073665"}


id: FYPO:0003164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclease activity is absent. All nuclease activities may be absent, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclease activity","synonyms":[{"name":"nuclease activity abolished","type":"exact"}],"termid":"FYPO:0003164"}


id: GO:0004812
data:
  {"annotated_genes":["SJAG_02263","SJAG_00420","SJAG_04473","SJAG_03277","SJAG_02015","SJAG_04482","SJAG_02977","SJAG_04840","SJAG_01197","SJAG_04094","SJAG_01797","SJAG_03071","SJAG_02236","SJAG_03626","SJAG_02428","SJAG_04285","SJAG_01235","SJAG_01522","SJAG_00443","SJAG_00653","SJAG_02517","SJAG_04762","SJAG_03585","SJAG_02615","SJAG_00488","SJAG_03545","SJAG_04856","SJAG_00103","SJAG_04738","SJAG_16456","SJAG_01159","SJAG_01352","SJAG_01259","SJAG_02206","SJAG_04409","SJAG_00243"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68385],"is_not":false,"summary":null,"term":"GO:0004812"},{"annotations":[89926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004813"},{"annotations":[103406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004814"},{"annotations":[98452,101252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004816"},{"annotations":[110238,114196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004815"},{"annotations":[91778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004817"},{"annotations":[86552,97641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004818"},{"annotations":[105497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004819"},{"annotations":[93209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004820"},{"annotations":[104566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004821"},{"annotations":[112230,108837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004822"},{"annotations":[94288,91248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004823"},{"annotations":[111850,101550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004824"},{"annotations":[91446,101386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004825"},{"annotations":[89834,93412,114184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004826"},{"annotations":[102101,103302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004827"},{"annotations":[91637,90864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004828"},{"annotations":[90673,103475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004829"},{"annotations":[93494,92106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004830"},{"annotations":[113555,111219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004831"},{"annotations":[93869,100854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004832"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-oxygen bonds","termid":"GO:0016875"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00243":null,"SJAG_00420":null,"SJAG_00443":null,"SJAG_00488":null,"SJAG_00653":null,"SJAG_01159":null,"SJAG_01197":null,"SJAG_01235":null,"SJAG_01259":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02206":null,"SJAG_02236":null,"SJAG_02263":null,"SJAG_02428":null,"SJAG_02517":null,"SJAG_02615":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03277":null,"SJAG_03545":null,"SJAG_03585":null,"SJAG_03626":null,"SJAG_04094":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04473":null,"SJAG_04482":null,"SJAG_04738":null,"SJAG_04762":null,"SJAG_04840":null,"SJAG_04856":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0003824","GO:0140098","GO:0016874"],"is_obsolete":false,"name":"aminoacyl-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0017100","EC:6.1.1.-","GO:0016876"],"synonyms":[{"name":"aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"},{"name":"ligase activity, forming aminoacyl-tRNA and related compounds","type":"broad"}],"termid":"GO:0004812","terms_by_termid":{"GO:0004812":null,"GO:0004813":null,"GO:0004814":null,"GO:0004815":null,"GO:0004816":null,"GO:0004817":null,"GO:0004818":null,"GO:0004819":null,"GO:0004820":null,"GO:0004821":null,"GO:0004822":null,"GO:0004823":null,"GO:0004824":null,"GO:0004825":null,"GO:0004826":null,"GO:0004827":null,"GO:0004828":null,"GO:0004829":null,"GO:0004830":null,"GO:0004831":null,"GO:0004832":null}}


id: GO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a mesenchymal cell, acquires specialized structural and/or functional features of a chondroblast. Differentiation includes the processes involved in commitment of a cell to a chondroblast fate. A chondroblast is a precursor cell to chondrocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroblast differentiation","synonyms":[{"name":"chondrocyte progenitor cell differentiation","type":"related"}],"termid":"GO:0060591"}


id: FYPO:0005486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased iron-sulfur cluster binding","synonyms":[{"name":"increased iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0005486"}


id: PBO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.19","termid":"PBO:0002470"}


id: GO:1902391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-terminal peptidyl-serine acetylation.","definition_xrefs":["GOC:TermGenie","PMID:23912279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein acetylation","termid":"GO:1901985"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-serine acetylation","termid":"GO:1902390"},{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"positively_regulates","term_name":"N-terminal peptidyl-serine acetylation","termid":"GO:0017198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of N-terminal peptidyl-serine acetylation","synonyms":[{"name":"activation of N-terminal peptidyl-serine acetylation","type":"narrow"},{"name":"up regulation of N-terminal peptidyl-serine acetylation","type":"exact"},{"name":"up-regulation of N-terminal peptidyl-serine acetylation","type":"exact"},{"name":"upregulation of N-terminal peptidyl-serine acetylation","type":"exact"}],"termid":"GO:1902391"}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: GO:0033726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + 2 oxidized ferredoxin = an acid + 2 H+ + 2 reduced ferredoxin.","definition_xrefs":["EC:1.2.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldehyde ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:16421","MetaCyc:1.2.7.5-RXN"],"synonyms":[{"name":"AOR","type":"related"},{"name":"aldehyde:ferredoxin oxidoreductase activity","type":"related"},{"name":"tungsten-containing aldehyde ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0033726"}


id: PBO:0056877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence G (pseudogene)","termid":"PBO:0056877"}


id: PBO:0074628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 24","termid":"PBO:0074628"}


id: FYPO:0001984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"protein absent from cell","termid":"FYPO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"protein absent from cell during vegetative growth","synonyms":[{"name":"protein absent from cell during mitotic cell cycle","type":"related"},{"name":"undetectable cellular protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0001984"}


id: PBO:0066569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid like 2","termid":"PBO:0066569"}


id: PBO:0084143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter of the major facilitator superfamily; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0084143"}


id: PBO:0057719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-4","termid":"PBO:0057719"}


id: GO:0072550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triferuloyl spermidine + NADPH + O2 = diferuloyl mono-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"triferuloylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11262"],"synonyms":[{"name":"triferuloyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072550"}


id: GO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. This begins with the newly hatched first-instar larva, through its maturation to the end of the last larval stage. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"},{"relation_name":"is_a","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval development","termid":"GO:0002168"}


id: PBO:0057410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548l","termid":"PBO:0057410"}


id: PBO:0085575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 20S proteasome assembly; forms a heterodimer with Add66p that binds to proteasome precursors; interaction with Pba1p-Add66p may affect function of the mature proteasome and its role in maintaining respiratory metabolism; similar to human PAC1 constituent of the PAC1-PAC2 complex involved in proteasome assembly","termid":"PBO:0085575"}


id: PATO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's penetrating or permeating another substance or area.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrative","synonyms":[{"name":"infiltrating","type":"exact"}],"termid":"PATO:0002103"}


id: PBO:0086083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt5p, can instead interact with Pmt1p in some conditions; antifungal drug target; PMT3 has a paralog, PMT2, that arose from the whole genome duplication","termid":"PBO:0086083"}


id: GO:1903530
data:
  {"annotated_genes":["SJAG_00661","SJAG_02366","SJAG_04509","SJAG_03763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[90053,84153,94600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secretion by cell.","definition_xrefs":["GOC:TermGenie","GOC:pm","GO_REF:0000058","PMID:12130530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02366":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of secretion by cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular secretion","type":"exact"}],"termid":"GO:1903530","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: PBO:0087734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the signal recognition particle (SRP); SRP functions in protein targeting to the endoplasmic reticulum membrane; not found in mammalian SRP; forms a pre-SRP structure in the nucleolus that is translocated to the cytoplasm","termid":"PBO:0087734"}


id: PBO:0082489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytically inactive alanine transaminase; expression is repressed in the presence of alanine and repression is mediated by Nrg1p; ALT2 has a paralog, ALT1, that arose from the whole genome duplication","termid":"PBO:0082489"}


id: PBO:0046136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2","termid":"PBO:0046136"}


id: PBO:0029393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029393"}


id: GO:0070546
data:
  {"annotated_genes":["SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080130"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-phenylalanine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"L-phenylalanine aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070546","terms_by_termid":{"GO:0080130":null}}


id: PBO:0005351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (predicted)","termid":"PBO:0005351"}


id: GO:1902057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (25S)-Delta(4)-dafachronate.","definition_xrefs":["GOC:TermGenie","PMID:20178781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate metabolic process","synonyms":[{"name":"(25S)-Delta(4)-dafachronate metabolism","type":"exact"}],"termid":"GO:1902057"}


id: PBO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit G (predicted)","termid":"PBO:0000536"}


id: PBO:0087652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; complex binds specifically to cytosolic chaperonin and transfers target proteins to it","termid":"PBO:0087652"}


id: GO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reversible switch of a cell from one phenotype to another that occurs upon infection of a host or host cell. For example, Candida albicans switches from a unicellular form to an invasive multicellular filamentous form upon infection of host tissue. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["PMID:16696644","GOC:di","Wikipedia:Phenotypic_switching"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic switching","termid":"GO:0036166"},{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenotypic switching in response to host","termid":"GO:0036167"}


id: GO:0098604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Se-Adenosyl-L-selenohomocysteine + H2O => Adenosine + Selenohomocysteine.","definition_xrefs":["GOC:dos","PMID:7305945","PMID:1711890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trialkylsulfonium hydrolase activity","termid":"GO:0016802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"adenosylselenohomocysteinase activity","secondary_identifiers":["Reactome:R-HSA-2408532"],"termid":"GO:0098604"}


id: PBO:0111891
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CHY","termid":"PBO:0111891"}


id: SO:1001194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001194 alternatively_spliced_gene_encoding_greater_than_1_polypeptide_coding_regions_overlapping (obsolete SO:1001194)","termid":"SO:1001194"}


id: PBO:0073040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 3","termid":"PBO:0073040"}


id: PBO:0069059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 306, pseudogene","termid":"PBO:0069059"}


id: GO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-threonine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine modification","termid":"GO:0018210"}


id: GO:1902866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:16872597","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retina development in camera-type eye","synonyms":[{"name":"regulation of retina development in camera-style eye","type":"exact"},{"name":"regulation of retinal development","type":"related"}],"termid":"GO:1902866"}


id: GO:0019931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["RESID:AA0312"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-N6-3-dehydroretinal-L-lysine (obsolete GO:0019931)","termid":"GO:0019931"}


id: GO:1904326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of circadian sleep/wake cycle, wakefulness.","definition_xrefs":["GO_REF:0000058","PMID:10923657","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"},{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, wakefulness","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, wakefulness","type":"narrow"}],"termid":"GO:1904326"}


id: GO:2000367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acrosomal vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"acrosomal vesicle exocytosis","termid":"GO:0060478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of acrosomal vesicle exocytosis","synonyms":[{"name":"regulation of acrosomal granule exocytosis","type":"related"},{"name":"regulation of acrosome exocytosis","type":"exact"}],"termid":"GO:2000367"}


id: PATO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000390 extreme (obsolete PATO:0000390)","termid":"PATO:0000390"}


id: FYECO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which doxorubicin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ doxorubicin","synonyms":[{"name":"+ 14-hydroxydaunomycin ","type":"related"},{"name":"+ 14-hydroxydaunorubicine ","type":"related"},{"name":"+ adriamycin","type":"related"}],"termid":"FYECO:0000308"}


id: PBO:0012593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Gsf1","termid":"PBO:0012593"}


id: PBO:0075691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 2","termid":"PBO:0075691"}


id: GO:0140813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: urate(out) + anion (in) = urate (in) + anion (out).","definition_xrefs":["PMID:12024214","PMID:18411268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"urate:monoatomic anion antiporter activity","synonyms":[{"name":"urate:anion antiporter activity","type":"broad"},{"name":"urate:organic anion antiporter activity","type":"narrow"}],"termid":"GO:0140813"}


id: PBO:0059955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 41","termid":"PBO:0059955"}


id: GO:0099643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any signal release from a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"signal release from synapse","termid":"GO:0099643"}


id: PBO:0049525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z variant histone 1","termid":"PBO:0049525"}


id: PBO:0081375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF213 antisense RNA 1 (head to head)","termid":"PBO:0081375"}


id: PBO:0060926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor","termid":"PBO:0060926"}


id: GO:0043584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose development","synonyms":[{"name":"nasus development","type":"exact"}],"termid":"GO:0043584"}


id: PBO:0051479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (V)-58 (pseudogene)","termid":"PBO:0051479"}


id: PBO:0072390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 16","termid":"PBO:0072390"}


id: GO:0035181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848927","PMID:12848939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: GO:0006139
data:
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