# terms

id: PBO:0087347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingoid long-chain base (LCB) efflux transporter; integral membrane transporter that localizes to the plasma membrane and may transport long chain bases (LCBs) from the cytoplasmic side toward the extracytoplasmic side of the membrane; role in glycerophospholipid translocation; suppressor of the sphingoid LCB sensitivity of an LCB-lyase mutation","termid":"PBO:0087347"}


id: PBO:0074715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75B","termid":"PBO:0074715"}


id: GO:0061982
data:
  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process that contributes to the first meiotic division. 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id: GO:0006473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein acetylation","synonyms":[{"name":"protein amino acid acetylation","type":"exact"}],"termid":"GO:0006473"}


id: GO:0047424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + methylenediurea = CO2 + 2 NH3 + N-hydroxymethylurea.","definition_xrefs":["RHEA:15929","EC:3.5.3.21","MetaCyc:3.5.3.21-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"methylenediurea deaminase activity","synonyms":[{"name":"methylenediurea aminohydrolase activity","type":"related"},{"name":"methylenediurease activity","type":"related"}],"termid":"GO:0047424"}


id: GO:1901342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vasculature development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasculature development","synonyms":[{"name":"regulation of vascular system development","type":"related"}],"termid":"GO:1901342"}


id: PBO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.30.-","termid":"PBO:0002544"}


id: PBO:0059123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-P-dolichol utilization defect 1","termid":"PBO:0059123"}


id: PR:Q92371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- btf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.14c","synonyms":[{"name":"NAC-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-btf3","type":"exact"},{"name":"beta-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92371"}


id: GO:0034764
data:
  {"annotated_genes":["SJAG_05346","SJAG_02605","SJAG_04551","SJAG_04920","SJAG_03591","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[86155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[89527,87940,95066,106737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[87941,95067,89528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04551":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transmembrane transport","type":"narrow"},{"name":"positive regulation of membrane transport","type":"exact"},{"name":"stimulation of transmembrane transport","type":"narrow"},{"name":"up regulation of transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane transport","type":"exact"}],"termid":"GO:0034764","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null}}


id: PBO:0065583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 7 (inactive)","termid":"PBO:0065583"}


id: PBO:0060315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase family member 4","termid":"PBO:0060315"}


id: PBO:0034278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_sequence","termid":"PBO:0034278"}


id: PBO:0004595
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.1","termid":"PBO:0004595"}


id: GO:1990125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotetrameric protein complex consisting of a symmetrical pair of DiaA homodimers. Facilitates DnaA binding to the origin of replication during replication initiation.","definition_xrefs":["GOC:bhm","PMID:17699754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DiaA complex","synonyms":[{"name":"DiaA homotetramer","type":"exact"}],"termid":"GO:1990125"}


id: PBO:0053625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 668","termid":"PBO:0053625"}


id: PBO:0029136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cordycepin","termid":"PBO:0029136"}


id: GO:1903855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["PMID:23437011","GOC:kmv","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"positively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress response to copper ion","synonyms":[{"name":"activation of response to copper ion stress","type":"narrow"},{"name":"activation of response to copper toxicity","type":"related"},{"name":"activation of stress response to copper ion","type":"narrow"},{"name":"positive regulation of response to copper ion stress","type":"exact"},{"name":"positive regulation of response to copper toxicity","type":"related"},{"name":"up regulation of response to copper ion stress","type":"exact"},{"name":"up regulation of response to copper toxicity","type":"related"},{"name":"up regulation of stress response to copper ion","type":"exact"},{"name":"up-regulation of response to copper ion stress","type":"exact"},{"name":"up-regulation of response to copper toxicity","type":"related"},{"name":"up-regulation of stress response to copper ion","type":"exact"},{"name":"upregulation of response to copper ion stress","type":"exact"},{"name":"upregulation of response to copper toxicity","type":"related"},{"name":"upregulation of stress response to copper ion","type":"exact"}],"termid":"GO:1903855"}


id: PBO:0052651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 19","termid":"PBO:0052651"}


id: GO:0019417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting the addition of oxygen to elemental sulfur.","definition_xrefs":["MetaCyc:FESULFOX-PWY","MetaCyc:SULFUROX-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfur oxidation","synonyms":[{"name":"sulphur oxidation","type":"exact"}],"termid":"GO:0019417"}


id: PBO:0011487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011487"}


id: CHEBI:31823
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A mercury coordination entity made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury dichloride","termid":"CHEBI:31823"}


id: PR:Q96WV2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCPB16A4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WV2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PH domain-containing protein PB16A4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.02c","synonyms":[{"name":"Spom972h-SPCPB16A4.02c","type":"exact"}],"termid":"PR:Q96WV2"}


id: PBO:0027079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane","termid":"PBO:0027079"}


id: PBO:0075676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spexin hormone","termid":"PBO:0075676"}


id: PBO:0004800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease (predicted)","termid":"PBO:0004800"}


id: PBO:0045155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 10 opposite strand","termid":"PBO:0045155"}


id: GO:0050455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 columbamine + O2 = 2 berberine + 2 H2O.","definition_xrefs":["RHEA:23564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"columbamine oxidase activity","secondary_identifiers":["EC:1.21.3.2","KEGG_REACTION:R00044","MetaCyc:COLUMBAMINE-OXIDASE-RXN"],"synonyms":[{"name":"berberine synthase activity","type":"related"},{"name":"columbamine:oxygen oxidoreductase (cyclizing)","type":"related"}],"termid":"GO:0050455"}


id: PBO:0073278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 12","termid":"PBO:0073278"}


id: GO:0009480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIb cytochrome c (obsolete GO:0009480)","synonyms":[{"name":"class IIb cytochrome c","type":"exact"}],"termid":"GO:0009480"}


id: PBO:0040480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN2 antisense RNA","termid":"PBO:0040480"}


id: GO:0032711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-27 production","termid":"GO:0032671"},{"relation_name":"negatively_regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-27 production","secondary_identifiers":["GO:0045535"],"synonyms":[{"name":"down regulation of interleukin-27 production","type":"exact"},{"name":"down-regulation of interleukin-27 production","type":"exact"},{"name":"downregulation of interleukin-27 production","type":"exact"},{"name":"inhibition of interleukin-27 production","type":"narrow"},{"name":"negative regulation of IL-27 production","type":"exact"},{"name":"negative regulation of interleukin-27 biosynthetic process","type":"narrow"}],"termid":"GO:0032711"}


id: PBO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; mRNA identified as translated by ribosome profiling data; overlaps the verified gene DIA1/YMR316W","termid":"PBO:0086012"}


id: GO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.","definition_xrefs":["ISBN:0124020607","GOC:mtg_kidney_jan10","GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney development","secondary_identifiers":["Wikipedia:Kidney_development"],"synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0001822"}


id: GO:0070155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling methionine to methionyl-tRNA in a mitochondrion, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionyl-tRNA aminoacylation","termid":"GO:0006431"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0010467","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial methionyl-tRNA aminoacylation","termid":"GO:0070155"}


id: GO:2000853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"is_a","term_name":"regulation of corticosterone secretion","termid":"GO:2000852"},{"relation_name":"negatively_regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of corticosterone secretion","termid":"GO:2000853"}


id: GO:0098598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vocalisation behavior that is the result of learning, or the process by which new vocalizations are learned.","definition_xrefs":["GOC:dos","PMID:16418265","GOC:BHF","PMID:17035521","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}


id: GO:0004579
data:
  {"annotated_genes":["SJAG_05348","SJAG_03333","SJAG_04127","SJAG_04090"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96204,97534,98753,113473],"is_not":false,"summary":null,"term":"GO:0004579"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine.","definition_xrefs":["RHEA:22980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyl transferase activity","termid":"GO:0004576"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03333":null,"SJAG_04090":null,"SJAG_04127":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide-protein glycotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446209","MetaCyc:RXN-16761","EC:2.4.99.18","Reactome:R-HSA-9694793"],"synonyms":[{"name":"asparagine N-glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide:protein-L-asparagine oligopolysaccharidotransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichylpyrophosphodiacetylchitobiose-protein glycosyltransferase activity","type":"exact"},{"name":"oligomannosyltransferase activity","type":"related"}],"termid":"GO:0004579","terms_by_termid":{"GO:0004579":null}}


id: GO:1902937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of inward rectifier potassium channel activity.","definition_xrefs":["GOC:bhm","PMID:16834334","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"inward rectifier potassium channel complex","termid":"GO:1902937"}


id: GO:0097417
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic, ball-like inclusion resembling a nucleolus and consisting of a convoluted network of electron-opaque strands embedded in a less dense matrix. It measures approximately 0.9 microns and lacks a limiting membrane. Its strands (diameter = 400-600 A) appear to be made of an entanglement of tightly packed filaments and particles approximately 25-50 A thick. Cytochemical studies suggest the presence of nonhistone proteins and some RNA. Usually only one such structure is present in a cell, and it appears to occur in most ganglion cells. Although they can be seen anywhere in the cell body, nematosomes are typically located in the perinuclear cytoplasm, where they are often associated with smooth-surfaced and coated vesicles.","definition_xrefs":["PMID:5458990","NIF_Subcellular:sao138430598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nematosome","termid":"GO:0097417"}


id: PBO:0089656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37a","termid":"PBO:0089656"}


id: FYPO:0006706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000138","FYPO:0001985","FYPO:0002114","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: PBO:0052343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF1C antisense RNA 1","termid":"PBO:0052343"}


id: PR:Q9UUD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An sre1-type sterol regulatory element-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:Q9UUD1","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sre1-type sterol regulatory element-binding protein 1","termid":"PR:000028989"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.09","synonyms":[{"name":"Spom972h-sre1","type":"exact"}],"termid":"PR:Q9UUD1"}


id: GO:0061678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular carbohydrate catabolic process that converts a carbohydrate to pyruvate and either glyceraldehyde or glyceraldehyde-3 phosphate by dehydration and aldol cleavage via a gluconate or 6-phosphogluconate intermediate.","definition_xrefs":["PMID:12921536","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"Entner-Doudoroff pathway","secondary_identifiers":["MetaCyc:Entner-Doudoroff-Pathways"],"termid":"GO:0061678"}


id: GO:1901441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate).","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) metabolic process","termid":"GO:1901440"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"poly(hydroxyalkanoate) formation","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:1901441"}


id: GO:0034051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hypersensitive response in a plant.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type hypersensitive response","termid":"GO:0010363"},{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"negatively_regulates","term_name":"plant-type hypersensitive response","termid":"GO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant-type hypersensitive response","synonyms":[{"name":"down regulation of plant-type hypersensitive response","type":"exact"},{"name":"down-regulation of plant-type hypersensitive response","type":"exact"},{"name":"downregulation of plant-type hypersensitive response","type":"exact"},{"name":"inhibition of plant-type hypersensitive response","type":"narrow"},{"name":"negative regulation of HR","type":"exact"},{"name":"negative regulation of HR-PCD","type":"exact"},{"name":"negative regulation of plant hypersensitive response","type":"exact"}],"termid":"GO:0034051"}


id: PBO:0040327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 2","termid":"PBO:0040327"}


id: PBO:0082920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c, isoform 1; also known as iso-1-cytochrome c; electron carrier of mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration; CYC1 has a paralog, CYC7, that arose from the whole genome duplication; human homolog CYC1 can complement yeast null mutant; mutations in human CYC1 cause insulin-responsive hyperglycemia","termid":"PBO:0082920"}


id: PBO:0089967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein","termid":"PBO:0089967"}


id: PBO:0084909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitogen-activated protein kinase involved in osmoregulation; controls global reallocation of RNAPII during osmotic shock; mediates recruitment/activation of RNAPII at Hot1p-dependent promoters; binds calmodulin; stimulates antisense transcription to activate CDC28; defines novel S-phase checkpoint with Mrc1p that prevent replication/transcription conflicts; nuclear form represses pseudohyphal growth; autophosphorylates; protein abundance increases under DNA replication stress","termid":"PBO:0084909"}


id: PBO:0076579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 7","termid":"PBO:0076579"}


id: MOD:01658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form an alpha-amino-Dabsyl-derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dabsyl derivatized residue","synonyms":[{"name":"N2DabsylRes","type":"exact"}],"termid":"MOD:01658"}


id: PBO:0053475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 445","termid":"PBO:0053475"}


id: GO:1900523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to amylopectin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to amylopectin","termid":"GO:1900521"},{"relation_name":"positively_regulates","term_name":"response to amylopectin","termid":"GO:0044591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to amylopectin","synonyms":[{"name":"activation of response to amylopectin","type":"narrow"},{"name":"up regulation of response to amylopectin","type":"exact"},{"name":"up-regulation of response to amylopectin","type":"exact"},{"name":"upregulation of response to amylopectin","type":"exact"}],"termid":"GO:1900523"}


id: FYPO:0004878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mitotically up-regulated RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells).","definition_xrefs":["PMID:18203864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of mitotically up-regulated gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of mitotically up-regulated gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of mitotically up-regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of mitotically up-regulated gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of mitotically upregulated gene mRNA during vegetative growth","type":"exact"},{"name":"decreased mitotically up-regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of mitotically up-regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004878"}


id: PBO:0069896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1187, pseudogene","termid":"PBO:0069896"}


id: PBO:0040764
data:
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id: RO:0002481
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id: GO:0016753
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id: PBO:0059508
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id: SO:0000287
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id: GO:1904629
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id: GO:0070674
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id: PBO:0071930
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id: PBO:0028926
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id: PBO:0056465
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id: GO:0031324
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id: PBO:0027984
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id: MOD:00400
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id: GO:1903180
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id: GO:0003405
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id: GO:0039502
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id: GO:0047434
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id: PBO:0057528
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id: PBO:0056929
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id: PBO:0047172
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id: GO:0006370
data:
  {"annotated_genes":["SJAG_01724","SJAG_04488","SJAG_04034","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95168,103888,104414,112929],"is_not":false,"summary":null,"term":"GO:0006370"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the mRNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["GOC:mah","PMID:9266685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"7-methylguanosine RNA capping","termid":"GO:0009452"},{"relation_name":"is_a","term_name":"nucleic acid biosynthetic process","termid":"GO:0141187"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"7-methylguanosine mRNA capping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5' end capping","type":"broad"},{"name":"5' mRNA capping","type":"exact"},{"name":"5'-end mRNA processing","type":"exact"},{"name":"5'-end processing","type":"broad"},{"name":"mRNA capping","type":"exact"}],"termid":"GO:0006370","terms_by_termid":{"GO:0006370":null}}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: GO:0004989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine octopamine to initiate a change in cell activity. Octopamine is found in both vertebrates and invertebrates and can have properties both of a hormone and a neurotransmitter and acts as an adrenergic agonist.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"octopamine receptor activity","termid":"GO:0004989"}


id: GO:1901559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ribavirin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ribavirin","termid":"GO:1901559"}


id: PBO:0077010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 1","termid":"PBO:0077010"}


id: GO:0048065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect extends his wings. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing extension","synonyms":[{"name":"male courtship behavior, wing extension","type":"broad"},{"name":"male courtship behaviour, veined wing extension","type":"exact"},{"name":"male courtship behaviour, wing extension","type":"broad"}],"termid":"GO:0048065"}


id: GO:2001278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"positively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of L-leucine biosynthetic process","synonyms":[{"name":"positive regulation of L-leucine anabolism","type":"exact"},{"name":"positive regulation of L-leucine biosynthesis","type":"exact"},{"name":"positive regulation of L-leucine formation","type":"exact"},{"name":"positive regulation of L-leucine synthesis","type":"exact"},{"name":"positive regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001278"}


id: PBO:0031387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_sulfite","termid":"PBO:0031387"}


id: PBO:0054488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1888","termid":"PBO:0054488"}


id: PBO:0080535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASHC5 antisense RNA 1","termid":"PBO:0080535"}


id: PBO:0076389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 2","termid":"PBO:0076389"}


id: PBO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YOR212W is not functional ortholog","termid":"PBO:0003635"}


id: PBO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 30, pseudogene","termid":"PBO:0070073"}


id: PBO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Jac1 (predicted)","termid":"PBO:0002624"}


id: GO:0022881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylgalactosamine(out) = protein histidine + N-acetylgalactosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0015571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003824","GO:0003674","GO:0016740","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylgalactosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylgalactosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022881"}


id: GO:0047747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) ATP + cholate + CoA = AMP + diphosphate + choloyl-CoA and (2) ATP + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + CoA = AMP + diphosphate + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA.","definition_xrefs":["EC:6.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"cholate-CoA ligase activity","secondary_identifiers":["GO:0047477","MetaCyc:CHOLATE--COA-LIGASE-RXN"],"synonyms":[{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate--CoA ligase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate-CoA ligase activity","type":"exact"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate:CoA ligase (AMP-forming) activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA ligase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA synthetase activity","type":"related"},{"name":"3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl coenzyme A synthetase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate-CoA ligase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate:CoA ligase (AMP-forming)","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA ligase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA synthetase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl coenzyme A synthetase activity","type":"related"},{"name":"BAL activity","type":"related"},{"name":"THCA-CoA ligase activity","type":"related"},{"name":"bile acid CoA ligase activity","type":"related"},{"name":"bile acid coenzyme A ligase activity","type":"related"},{"name":"cholate thiokinase activity","type":"related"},{"name":"cholate:CoA ligase (AMP-forming)","type":"related"},{"name":"cholic acid:CoA ligase activity","type":"related"},{"name":"cholic thiokinase activity","type":"related"},{"name":"choloyl coenzyme A synthetase activity","type":"related"},{"name":"choloyl-CoA synthetase activity","type":"related"},{"name":"cholyl-CoA synthetase activity","type":"related"},{"name":"trihydroxycoprostanoyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047747"}


id: FYPO:0003174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["PomBase:mah","GO:0006289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"normal NER during cellular response to UV","type":"exact"},{"name":"normal excision repair during cellular response to UV","type":"broad"},{"name":"normal nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal nucleotide-excision repair during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003174"}


id: PBO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.11.-","termid":"PBO:0001176"}


id: PBO:0071634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 53","termid":"PBO:0071634"}


id: PBO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh2 (predicted)","termid":"PBO:0000171"}


id: PBO:0042030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC86 antisense RNA 1","termid":"PBO:0042030"}


id: PBO:0056303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 2","termid":"PBO:0056303"}


id: PATO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000194 spontaneous_activity (obsolete PATO:0000194)","termid":"PATO:0000194"}


id: PBO:0070001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1297, pseudogene","termid":"PBO:0070001"}


id: PBO:0079362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 4a","termid":"PBO:0079362"}


id: GO:0010298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrocamalexic acid = camalexin + CO2 + H+.","definition_xrefs":["PMID:16766671","MetaCyc:RXN-8275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydrocamalexic acid decarboxylase activity","secondary_identifiers":["RHEA:34807"],"termid":"GO:0010298"}


id: PBO:0034685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_intergenic_meiotic_recombination","termid":"PBO:0034685"}


id: PBO:0082818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAD+ dependent histone deacetylase of the Sirtuin family; deacetylation targets are primarily nuclear proteins; required for telomere hypercluster formation in quiescent yeast cells; involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and rDNA; negatively regulates initiation of DNA replication; functions as regulator of autophagy like mammalian homolog SIRT1, and also of mitophagy","termid":"PBO:0082818"}


id: PBO:0073584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2","termid":"PBO:0073584"}


id: PBO:0066910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 211","termid":"PBO:0066910"}


id: PBO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ER retention signal","termid":"PBO:0000824"}


id: PBO:0000649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc19","termid":"PBO:0000649"}


id: PBO:0088191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcriptional activator of the Zn2Cys6 family; activates transcription of aromatic amino acid catabolic genes in the presence of aromatic amino acids","termid":"PBO:0088191"}


id: GO:0102981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxy-5-methyl-2-propyl-3(2H)-furanone + NADP = (2E)-4-hydroxy-5-methyl-2-propylidene-3(2H)-furanone + NADPH + H+.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxy-5-methyl-2-propyl-3(2H)-furanone oxidoreductase activity (obsolete GO:0102981)","secondary_identifiers":["MetaCyc:RXN-9567"],"termid":"GO:0102981"}


id: GO:0141026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to cholesterol on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23239883","PMID:17557817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane cholesterol","termid":"GO:0141026"}


id: FYPO:0000650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index","synonyms":[{"name":"increased number of septated cells","type":"exact"},{"name":"increased septation","type":"related"},{"name":"septated","type":"related"}],"termid":"FYPO:0000650"}


id: PBO:0082695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore-associated Ndc80 complex; conserved coiled-coil protein involved in chromosome segregation, spindle checkpoint activity, and kinetochore assembly and clustering; evolutionarily conserved; complex members include Ndc80p, Nuf2p, Scp24p, and Spc25p; modified by sumoylation","termid":"PBO:0082695"}


id: PBO:0041045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 2","termid":"PBO:0041045"}


id: PBO:0039557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 4","termid":"PBO:0039557"}


id: PBO:0066286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member K, pseudogene","termid":"PBO:0066286"}


id: PBO:0058482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5589","termid":"PBO:0058482"}


id: GO:0046501
data:
  {"annotated_genes":["SJAG_02896","SJAG_04109","SJAG_05283","SJAG_03961","SJAG_00097","SJAG_04944","SJAG_01372","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92570,91978,87186,90634,66654,113154,88548,89049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006782"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving protoporphyrinogen IX, the specific substrate for the enzyme ferrochelatase, which catalyzes the insertion of iron to form protoheme. It is probably also the substrate for chlorophyll formation.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01372":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"protoporphyrinogen IX metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"protoporphyrinogen IX metabolism","type":"exact"}],"termid":"GO:0046501","terms_by_termid":{"GO:0006782":null}}


id: MOD:01011
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-hydroxysuccinimide (ONSu, OSu)","termid":"MOD:01011"}


id: GO:1902955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of early endosome to recycling endosome transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:sjp","PMID:22621900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of early endosome to recycling endosome transport","termid":"GO:1902954"},{"relation_name":"positively_regulates","term_name":"early endosome to recycling endosome transport","termid":"GO:0061502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of early endosome to recycling endosome transport","synonyms":[{"name":"activation of early endosome to recycling endosome transport","type":"narrow"},{"name":"up regulation of early endosome to recycling endosome transport","type":"exact"},{"name":"up-regulation of early endosome to recycling endosome transport","type":"exact"},{"name":"upregulation of early endosome to recycling endosome transport","type":"exact"}],"termid":"GO:1902955"}


id: PR:Q9URX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URX0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C922.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.06","synonyms":[{"name":"Spom972h-SPAC922.06","type":"exact"}],"termid":"PR:Q9URX0"}


id: PBO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_mitosis","termid":"PBO:0036076"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: GO:0102118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A4 + S-adenosyl-L-methionine = gibberellin A4 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.276","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"gibberellin A4 carboxyl methyltransferase activity","secondary_identifiers":["RHEA:36107","MetaCyc:RXN-11359"],"termid":"GO:0102118"}


id: GO:0060216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood.","definition_xrefs":["PMID:15617691","GOC:bf","GOC:dph","PMID:15378083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"definitive hemopoiesis","synonyms":[{"name":"definitive haematopoiesis","type":"related"},{"name":"definitive haemopoiesis","type":"exact"},{"name":"definitive hematopoiesis","type":"exact"}],"termid":"GO:0060216"}


id: PBO:0044985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 36","termid":"PBO:0044985"}


id: GO:0043979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-K5 acetylation (obsolete GO:0043979)","synonyms":[{"name":"histone H2B acetylation at K5","type":"exact"}],"termid":"GO:0043979"}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["GOC:nc","GOC:BHF","PMID:19809492","GOC:BHF_telomere","PMID:19858100","PMID:19214183","PMID:19581589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200","GO:0044085"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: PBO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 3","termid":"PBO:0040015"}


id: GO:0070492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oligosaccharide, a molecule with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide binding","termid":"GO:0070492"}


id: GO:0061116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis process in which the ductus venosus changes to no longer permit blood flow after birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ductus venosus closure","termid":"GO:0061116"}


id: PBO:0051377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 4-1","termid":"PBO:0051377"}


id: PBO:0038929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L3","termid":"PBO:0038929"}


id: PBO:0109455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1341, pseudogene","termid":"PBO:0109455"}


id: PBO:0004000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin Trx2","termid":"PBO:0004000"}


id: GO:0060597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of the mammary line, placode or bud.","definition_xrefs":["GOC:dph","PMID:16168142"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in mammary gland formation (obsolete GO:0060597)","termid":"GO:0060597"}


id: SO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i, i+1, i+2 if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees: phi(i+1)=-79.0 - psi(i+1)=69.0.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma_turn","termid":"SO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn_inverse","secondary_identifiers":["BS:00221"],"synonyms":[{"name":"gamma turn inverse","type":"exact"}],"termid":"SO:0001140"}


id: PBO:0091858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1","termid":"PBO:0091858"}


id: PATO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"wet","termid":"PATO:0001823"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased wetness","termid":"PATO:0001825"}


id: PBO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH complex cyclin Mcs2","termid":"PBO:0003809"}


id: PBO:0065593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 9","termid":"PBO:0065593"}


id: GO:0015145
data:
  {"annotated_genes":["SJAG_03608","SJAG_00057","SJAG_03820"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[99172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[110364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[113369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a monosaccharide from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar transmembrane transporter activity","termid":"GO:0051119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"monosaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015145","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0140108":null}}


id: GO:0021694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar Purkinje cell layer. This process pertains to the initial formation of a structure from unspecified parts. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}


id: PBO:0057492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 610","termid":"PBO:0057492"}


id: PBO:0036121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_actomyosin_contractile_ring_assembly","termid":"PBO:0036121"}


id: PBO:0041584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 42","termid":"PBO:0041584"}


id: PBO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 15","termid":"PBO:0046357"}


id: GO:0019661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, via canonical glycolysis, yielding energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucose catabolic process to lactate via pyruvate","secondary_identifiers":["MetaCyc:ANAEROFRUCAT-PWY"],"synonyms":[{"name":"glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"homofermentation","type":"exact"},{"name":"homofermentative lactate fermentation","type":"exact"},{"name":"homofermentative pathway","type":"exact"},{"name":"homolactate fermentation","type":"exact"},{"name":"homolactic fermentation","type":"exact"}],"termid":"GO:0019661"}


id: GO:1902386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycyrrhetinate.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid biosynthetic process","termid":"GO:0019745"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"glycyrrhetinate metabolic process","termid":"GO:1902384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycyrrhetinate biosynthetic process","synonyms":[{"name":"glycyrrhetinate formation","type":"exact"},{"name":"glycyrrhetinate synthesis","type":"exact"},{"name":"glycyrrhetinate anabolism","type":"exact"},{"name":"glycyrrhetinate biosynthesis","type":"exact"}],"termid":"GO:1902386"}


id: PBO:0047755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOCAD antisense RNA 1","termid":"PBO:0047755"}


id: MOD:01772
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The palmityl cation protein modification reporter fragment produced by fragmentation of some palmitoyl modified residues.","definition_xrefs":["PubMed:8413602","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmityl reporter fragment","synonyms":[{"name":"Pam+","type":"exact"},{"name":"palmityl cation","type":"related"}],"termid":"MOD:01772"}


id: GO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signaling process that monitors and signals errors in the placement or orientation of the spindle in the cell. This delays the completion of anaphase until errors are corrected.","definition_xrefs":["PMID:14616062","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exit from mitosis","termid":"GO:0001100"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772","GO:0023052"],"is_obsolete":false,"name":"mitotic spindle orientation checkpoint signaling","secondary_identifiers":["GO:0072483"],"synonyms":[{"name":"SOC","type":"exact"},{"name":"SPOC","type":"exact"},{"name":"mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"mitotic spindle orientation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"spindle position checkpoint","type":"exact"}],"termid":"GO:0031578"}


id: PBO:0064277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H3","termid":"PBO:0064277"}


id: GO:1990959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of eosinophils such that the total number of eosinophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil homeostasis","synonyms":[{"name":"eosinocyte homeostasis","type":"exact"},{"name":"eosinophilic granulocyte homeostasis","type":"exact"},{"name":"eosinophilic leucocyte homeostasis","type":"exact"},{"name":"eosinophilic leukocyte homeostasis","type":"exact"}],"termid":"GO:1990959"}


id: PBO:0049245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE like 2, mitochondrial","termid":"PBO:0049245"}


id: PBO:0082711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mitochondrial TIM22 complex; involved in insertion of polytopic proteins into the inner membrane","termid":"PBO:0082711"}


id: PR:P0C5Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ten1 gene.","definition_xrefs":["UniProtKB:P0C5Y7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ten1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.14","synonyms":[{"name":"Spom972h-ten1","type":"exact"}],"termid":"PR:P0C5Y7"}


id: PBO:0004152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1-UNC-like protein involved protein folding in the ER (predicted)","termid":"PBO:0004152"}


id: GO:1901434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toluene catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of toluene metabolic process","termid":"GO:1901437"},{"relation_name":"regulates","term_name":"toluene catabolic process","termid":"GO:0042203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of toluene catabolic process","synonyms":[{"name":"regulation of toluene breakdown","type":"exact"},{"name":"regulation of toluene catabolism","type":"exact"},{"name":"regulation of toluene degradation","type":"exact"}],"termid":"GO:1901434"}


id: GO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5,6,7,8-tetrahydrofolate + trimethylsulfonium = (6S)-5-methyl-5,6,7,8-tetrahydrofolate + dimethyl sulfide + H+.","definition_xrefs":["RHEA:13693","EC:2.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"trimethylsulfonium-tetrahydrofolate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02573","MetaCyc:2.1.1.19-RXN"],"synonyms":[{"name":"trimethylsulfonium-tetrahydrofolate methyltransferase activity","type":"related"},{"name":"trimethylsulfonium:tetrahydrofolate N-methyltransferase activity","type":"related"},{"name":"trimethylsulphonium-tetrahydrofolate N-methyltransferase activity","type":"exact"}],"termid":"GO:0047147"}


id: MOD:01390
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-valine residue to form L-valine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0467","PubMed:7328054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-methylpropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-methylpropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Val-Cys)","type":"exact"},{"name":"L-valine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01390"}


id: PBO:0047827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P1","termid":"PBO:0047827"}


id: FYECO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arginine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arginine","termid":"FYECO:0000082"}


id: GO:0034823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellate + CoASH + ATP = citronellyl-CoA + AMP + PPi.","definition_xrefs":["UM-BBD_reactionID:r1157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"citronellyl-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R08088"],"termid":"GO:0034823"}


id: GO:0047323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) = ADP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) phosphate.","definition_xrefs":["EC:2.7.11.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004672","GO:0016301","GO:0003674","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"[3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity","secondary_identifiers":["MetaCyc:2.7.11.4-RXN","Reactome:R-HSA-5693148","RHEA:17301"],"synonyms":[{"name":"3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) kinase activity","type":"related"},{"name":"ATP:3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) phosphotransferase activity","type":"related"},{"name":"BCK","type":"related"},{"name":"BCKD kinase activity","type":"related"},{"name":"BCODH kinase activity","type":"related"},{"name":"STK2","type":"related"},{"name":"[3-methyl-2-oxobutanoate dehydrogenase (lipoamide)] kinase activity","type":"exact"},{"name":"branched-chain 2-oxo acid dehydrogenase kinase activity","type":"related"},{"name":"branched-chain alpha-ketoacid dehydrogenase kinase activity","type":"related"},{"name":"branched-chain keto acid dehydrogenase kinase activity","type":"related"},{"name":"branched-chain oxo acid dehydrogenase kinase (phosphorylating) activity","type":"related"}],"termid":"GO:0047323"}


id: PBO:0077894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taperin","termid":"PBO:0077894"}


id: GO:0045257
data:
  {"annotated_genes":["SJAG_01671","SJAG_03920","SJAG_02398","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85050,85415,112933,109389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005749"}]},"cv_name":"cellular_component","definition":"The enzyme that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["GOC:kd","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"succinate dehydrogenase complex","termid":"GO:0045281"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"succinate dehydrogenase complex (ubiquinone)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045257","terms_by_termid":{"GO:0005749":null}}


id: GO:0016507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that includes the long-chain 3-hydroxyacyl-CoA dehydrogenase and long-chain enoyl-CoA hydratase activities in two subunits (alpha and beta), catalyzing two steps of the fatty acid beta-oxidation cycle within the mitochondrial matrix.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation multienzyme complex","termid":"GO:0036125"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial fatty acid beta-oxidation multienzyme complex","synonyms":[{"name":"fatty acid beta-oxidation multienzyme complex","type":"broad"},{"name":"trifunctional enzyme","type":"related"}],"termid":"GO:0016507"}


id: _global:regulates_o_results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that applies between a process that regulates the specification of some cell type or structure and the specified cell type or structure.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_specification_of","secondary_identifiers":["GOREL:0001027"],"synonyms":[{"name":"regulates_o_results_in_specification_of","type":"exact"}],"termid":"_global:regulates_o_results_in_specification_of"}


id: GO:1900427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cellular response to oxidative stress.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:10348908"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900427)","synonyms":[{"name":"regulation of adaptive response to oxidative stress by regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900427"}


id: GO:0000275
data:
  {"annotated_genes":["SJAG_00438","SJAG_02564","SJAG_03114","SJAG_02598","SJAG_00915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85361,89051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005754"},{"annotations":[101182,104981,99220],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005756"}]},"cv_name":"cellular_component","definition":"The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex","termid":"GO:0005753"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00438":null,"SJAG_00915":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0000275","terms_by_termid":{"GO:0005754":null,"GO:0005756":null}}


id: PBO:0073459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A2","termid":"PBO:0073459"}


id: PBO:0040661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 7","termid":"PBO:0040661"}


id: PBO:0004478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp3 (predicted)","termid":"PBO:0004478"}


id: PBO:0082692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the histone deacetylase Rpd3L complex; possibly involved in cell fusion and invasive growth; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082692"}


id: GO:0044564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant blocking of a voltage-gated potassium channel, inhibiting the pore's activity, in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism","termid":"GO:0044562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in occlusion of the pore of voltage-gated potassium channel in another organism","synonyms":[{"name":"envenomation resulting in occlusion of the pore of voltage-gated potassium channel in other organism","type":"exact"}],"termid":"GO:0044564"}


id: PBO:0091173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps55","termid":"PBO:0091173"}


id: GO:0015383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + bicarbonate(in) = sulfate(in) + bicarbonate(out).","definition_xrefs":["TC:2.A.53.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sulfate:bicarbonate antiporter activity","synonyms":[{"name":"sulfate:hydrogencarbonate antiporter activity","type":"exact"},{"name":"sulphate:bicarbonate antiporter activity","type":"exact"}],"termid":"GO:0015383"}


id: GO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-keto-5-aminohexanoate + acetyl-CoA = L-3-aminobutyryl-CoA + acetoacetate.","definition_xrefs":["PMID:13064","MetaCyc:R125-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"3-keto-5-aminohexanoate cleavage activity","secondary_identifiers":["RHEA:31555"],"synonyms":[{"name":"3-keto-5-aminohexanoate cleavage enzyme","type":"exact"}],"termid":"GO:0043720"}


id: PBO:0066808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 107","termid":"PBO:0066808"}


id: GO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium dodecyl sulfate (SDS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sodium dodecyl sulfate","synonyms":[{"name":"response to SDS","type":"exact"}],"termid":"GO:0072706"}


id: GO:0120101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hetero-hexameric complex of 2 membrane proteins, A and B, with stoichiometry A4B2. The A and B proteins form a channel through which flow the ions that power the bacterial-type flagellum. They form the stator, or nonrotating portion, of the flagellum motor with the B protein apparently attached to the peptidoglycan cell wall. Examples include the H+ driven MotA-MotB stator complex of Escherichia coli and Salmonella enterica, and the Na+ driven PomA-PomB stator complex of Vibrio and Shewanella species.","definition_xrefs":["PMID:24697492","PMID:25251856","PMID:10572114","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"bacterial-type flagellum motor","termid":"GO:0120100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"bacterial-type flagellum stator complex","synonyms":[{"name":"bacterial-type flagellum motor force generator complex","type":"exact"},{"name":"bacterial-type flagellum torque generator complex","type":"exact"}],"termid":"GO:0120101"}


id: PBO:0044039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 11","termid":"PBO:0044039"}


id: SO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby an arm exists as an individual chromosome element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_chromosome_arm","synonyms":[{"name":"free chromosome arm","type":"exact"}],"termid":"SO:0000065"}


id: PR:Q9P7D6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0303 protein P4H10.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.12","synonyms":[{"name":"Spom972h-SPBP4H10.12","type":"exact"}],"termid":"PR:Q9P7D6"}


id: PBO:0069087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 334, pseudogene","termid":"PBO:0069087"}


id: PBO:0086781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and seamless GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0086781"}


id: GO:0070101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"positively_regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"positive regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070101"}


id: GO:0071912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Release of neurotransmitter at the synapse that persists for tens to hundreds of milliseconds after action potential invasion.","definition_xrefs":["GOC:dsf","PMID:19477156","PMID:20643933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"asynchronous neurotransmitter secretion","termid":"GO:0071912"}


id: GO:0160086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a polar microtubule.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to polar microtubule","termid":"GO:0160086"}


id: PBO:0091237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase-like and DUF1989 family protein, implicated in urea metabolism","termid":"PBO:0091237"}


id: PBO:0000828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0000828"}


id: PBO:0085693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of sterol biosynthesis; specifically stabilizes Hmg2p, one of two HMG-CoA isoenzymes that catalyze the rate-limiting step in sterol biosynthesis; homolog of mammalian INSIG proteins; NSG2 has a paralog, NSG1, that arose from the whole genome duplication","termid":"PBO:0085693"}


id: GO:0004624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete secreted phospholipase A2 activity (obsolete GO:0004624)","synonyms":[{"name":"secreted phospholipase A2 activity","type":"exact"}],"termid":"GO:0004624"}


id: MOD:01620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two cysteine residues by formation of a chain of three or more bonded sulfur atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"multisulfide crosslinked residues","termid":"MOD:01619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysulfide crosslinked residues","termid":"MOD:01620"}


id: PBO:0017522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4, Gim3 (predicted)","termid":"PBO:0017522"}


id: GO:0031732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR7 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR7 chemokine receptor binding","synonyms":[{"name":"CCR7 chemokine receptor ligand","type":"narrow"},{"name":"MIP-3 beta receptor binding","type":"exact"},{"name":"type 1 EBV-induced G-protein coupled receptor binding","type":"exact"}],"termid":"GO:0031732"}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: PBO:0016535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic glycine-tRNA ligase Grs1","termid":"PBO:0016535"}


id: PBO:0111895
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atf-CREB subfamily","termid":"PBO:0111895"}


id: PBO:0039671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP4B1 antisense RNA 1","termid":"PBO:0039671"}


id: PBO:0081376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 214","termid":"PBO:0081376"}


id: PBO:0047318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 2","termid":"PBO:0047318"}


id: PBO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030965"}


id: GO:0098628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphate residues from peptidyl-N-phospho-arginine to form peptidyl-arginine.","definition_xrefs":["PMID:23770242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-N-phospho-arginine dephosphorylation","termid":"GO:0098628"}


id: PBO:0067403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 510, pseudogene","termid":"PBO:0067403"}


id: GO:0150048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a granule cell fiber onto the dendrites of a Purkinje cell in cerebellum.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:12427822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar granule cell to Purkinje cell synapse","synonyms":[{"name":"cerebellar parallel fiber to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150048"}


id: PBO:0091235
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.101871_101872insG","termid":"PBO:0091235"}


id: GO:0060785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptosis that results in the maintenance of the steady-state number of cells within a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"part_of","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptosis involved in tissue homeostasis","termid":"GO:0060785"}


id: PBO:0065128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 1","termid":"PBO:0065128"}


id: PBO:0043746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7B2","termid":"PBO:0043746"}


id: PBO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Bulleromyces albus DPS1","termid":"PBO:0036385"}


id: PATO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's homogeneity of a biomaterial.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomaterial purity","termid":"PATO:0001339"}


id: PBO:0082501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase delta; responsible for most of lagging strand DNA synthesis; required for chromosomal DNA replication during mitosis and meiosis, intragenic recombination, repair of double strand DNA breaks, and DNA replication during nucleotide excision repair (NER)","termid":"PBO:0082501"}


id: PBO:0089424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane Haemolysin-III family protein involved in zinc homeostasis Izh3","termid":"PBO:0089424"}


id: PBO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_thiabendazole","termid":"PBO:0031361"}


id: GO:0032506
data:
  {"annotated_genes":["SJAG_00256","SJAG_04943","SJAG_03592","SJAG_04597","SJAG_03048","SJAG_01114","SJAG_02645","SJAG_01386","SJAG_01894","SJAG_04690","SJAG_00845","SJAG_04703","SJAG_03681","SJAG_04666","SJAG_01805","SJAG_01889","SJAG_03025","SJAG_02380","SJAG_00268","SJAG_03631","SJAG_00082","SJAG_00807","SJAG_01787","SJAG_05179","SJAG_01453","SJAG_03123","SJAG_03379","SJAG_05290","SJAG_04982","SJAG_02592","SJAG_04455","SJAG_01188","SJAG_02864","SJAG_03508","SJAG_04358","SJAG_04930","SJAG_02215","SJAG_02169","SJAG_00229","SJAG_03704","SJAG_02838","SJAG_02392","SJAG_02514","SJAG_04621","SJAG_04776","SJAG_03596","SJAG_00883","SJAG_03342","SJAG_00228","SJAG_02700","SJAG_02222","SJAG_00442","SJAG_00526","SJAG_06270","SJAG_02916","SJAG_03309","SJAG_01774","SJAG_00279","SJAG_04887","SJAG_03045","SJAG_01215","SJAG_01943","SJAG_03936","SJAG_00938","SJAG_05285","SJAG_01143","SJAG_04077","SJAG_03703","SJAG_00700","SJAG_02831","SJAG_01732","SJAG_01790","SJAG_03581","SJAG_03915","SJAG_00514","SJAG_04468","SJAG_02431","SJAG_01665","SJAG_04509","SJAG_03353","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[94485,94229,85559,104326],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000917"},{"annotations":[87497,95939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"},{"annotations":[84509,114602,98747,88744,91487,115246,113204,93921,97445,98607,88530,114781,93845,95087,108500,94230,88790,104328,73905,114025,108066,94119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94231],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[97113,93846,114026,108501,84510,91488,95088,96881,98608,94232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[92515,105048,84524,106961,115494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[109276,95473,103231,102286,102302,98825,100846,97114,104810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[95846],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010974"},{"annotations":[98552],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[99888],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98557],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[89125,87930,112082,95766,89664,101215,86948,89044,91846,95847,103733,103422,97456,106370],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[86227,90610],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[90611,109559,106720,90778,83785],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[92056,99891,115495,86990,106963],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[86096,88623,85473,109560,111642,101356,90010,103233,114038,102562],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[83786,88624,90614],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[90014,106721,83787,86231,98570],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[102287,110568],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031671"},{"annotations":[77119],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0031991"},{"annotations":[90779,77120,88628,84149,86098],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032955"},{"annotations":[115751,90576,90016],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[107567,84108,97568],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[114039],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111998],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cellular process that is involved in cytokinesis (the division of the cytoplasm of a cell and its separation into two daughter cells).","definition_xrefs":["GOC:mah","GOC:isa_complete","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle 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process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:0032506","terms_by_termid":{"GO:0000915":null,"GO:0000917":null,"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031671":null,"GO:0031991":null,"GO:0032955":null,"GO:0061796":null,"GO:0071520":null,"GO:0120306":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: GO:0106363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-[protein] + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + S-methyl-L-cysteinyl-[protein].","definition_xrefs":["GOC:sp","PMID:24235145","PMID:25412445","RHEA:66544","PMID:21481189","PMID:22158122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0008276","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine methyltransferase activity","synonyms":[{"name":"protein cysteine methylase activity","type":"exact"},{"name":"protein cysteine methyltransferase activity","type":"exact"}],"termid":"GO:0106363"}


id: MOD:00524
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:156","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2dHex2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)dHex(2)","type":"related"},{"name":"Hex1HexNAc2dHex2","type":"related"}],"termid":"MOD:00524"}


id: GO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylacetanilide + OH- = N-isopropylaniline + acetate.","definition_xrefs":["UM-BBD_reactionID:r0913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-isopropylacetanilide amidohydrolase activity","termid":"GO:0034576"}


id: GO:0018922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prodione, a colorless, odorless crystal. It is used as a dicarboximide contact fungicide to control a wide variety of crop diseases by inhibiting the germination of spores and the growth of the fungal mat (mycelium).","definition_xrefs":["UM-BBD_pathwayID:ipd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iprodione metabolic process","synonyms":[{"name":"iprodione metabolism","type":"exact"}],"termid":"GO:0018922"}


id: FYECO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which FITC-conjugated lectin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000163 FITC-conjugated lectin added (obsolete FYECO:0000163)","termid":"FYECO:0000163"}


id: GO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-mitochondrial processing peptidase (obsolete GO:0004241)","synonyms":[{"name":"alpha-MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"exact"}],"termid":"GO:0004241"}


id: GO:0090329
data:
  {"annotated_genes":["SJAG_03720","SJAG_04855","SJAG_00247","SJAG_03997","SJAG_02074","SJAG_01210","SJAG_03160","SJAG_02162","SJAG_03438","SJAG_01068","SJAG_03695","SJAG_03048","SJAG_00364","SJAG_03097","SJAG_02724","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113026,105087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[105088,98554,93969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[113434,99510,108231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[98559,85293,112418,102805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[95544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"},{"annotations":[99417],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[104709,98459,102818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043111"},{"annotations":[95545,99418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[98460,95546,111201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[95547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[98461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of DNA-templated DNA replication, the process in which new strands of DNA are synthesized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication","termid":"GO:0006275"},{"relation_name":"regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00364":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:0090329","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0043111":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0013449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain and HEAT repeat protein Ppk3","termid":"PBO:0013449"}


id: RO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between protein a (a transcription factor) and DNA element b if and only if a diminishes the process of transcription of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_negatively_regulates_activity_of","termid":"RO:0002449"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"represses_expression_of","termid":"RO:0003002"}


id: PBO:0016975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug95","termid":"PBO:0016975"}


id: GO:0043333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-octaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:kd","PMID:9045837"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity (obsolete GO:0043333)","synonyms":[{"name":"2-octaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity","type":"exact"}],"termid":"GO:0043333"}


id: GO:1904305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastro-intestinal system smooth muscle contraction.","definition_xrefs":["PMID:10821044","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"negatively_regulates","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastro-intestinal system smooth muscle contraction","synonyms":[{"name":"down regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"down-regulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"downregulation of gastro-intestinal system smooth muscle contraction","type":"exact"},{"name":"inhibition of gastro-intestinal system smooth muscle contraction","type":"narrow"}],"termid":"GO:1904305"}


id: GO:0005360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + H(out)+ = glucose(in) + H(in)+, in response to a stimulus by insulin. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"insulin-responsive glucose:proton symporter activity","synonyms":[{"name":"insulin-responsive hydrogen:glucose symporter activity","type":"exact"},{"name":"insulin-responsive hydrogen:glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen/glucose transporter activity","type":"related"}],"termid":"GO:0005360"}


id: PBO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein (predicted)","termid":"PBO:0000478"}


id: PBO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas cell surface death receptor","termid":"PBO:0047307"}


id: PBO:0048081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 2","termid":"PBO:0048081"}


id: PBO:0060136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 37","termid":"PBO:0060136"}


id: PBO:0091992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel, beta subunit, aldo-keto reductase","termid":"PBO:0091992"}


id: GO:2000163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in outflow tract morphogenesis (obsolete GO:2000163)","termid":"GO:2000163"}


id: PBO:0047212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 222 member A","termid":"PBO:0047212"}


id: PBO:0086377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase of the AAA family; interacts with the Sin1p transcriptional repressor in the two-hybrid system","termid":"PBO:0086377"}


id: FYPO:0005763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal, including at sites where forks do not normally pause.","definition_xrefs":["PomBase:mah","PMID:27611590","PMID:25471935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic DNA replication elongation","termid":"FYPO:0003923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased replication fork pausing","synonyms":[{"name":"increased replication fork pausing during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing during vegetative growth","type":"exact"}],"termid":"FYPO:0005763"}


id: PBO:0050446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U","termid":"PBO:0050446"}


id: PATO:0000994
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000994 absolute viscosity (obsolete PATO:0000994)","termid":"PATO:0000994"}


id: GO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland cord are generated and organized. Mammary gland cords form when the mammary gland bud invades the mammary fat.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord morphogenesis","synonyms":[{"name":"mammary gland sprout morphogenesis","type":"exact"}],"termid":"GO:0060652"}


id: PBO:0038523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (Junior blood group)","termid":"PBO:0038523"}


id: PBO:0069827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1113, pseudogene","termid":"PBO:0069827"}


id: PBO:0052879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-1","termid":"PBO:0052879"}


id: MOD:01417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a monomethylated proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated proline","synonyms":[{"name":"Me1Pro","type":"exact"}],"termid":"MOD:01417"}


id: FYPO:0001890
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115582,115584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115583,115585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"},{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: increased","type":"related"},{"name":"increased RNA accumulation","type":"related"},{"name":"increased cellular RNA level","type":"exact"},{"name":"increased cellular mRNA level","type":"narrow"},{"name":"increased transcript level","type":"exact"}],"termid":"FYPO:0001890","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null}}


id: PBO:0053737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 960","termid":"PBO:0053737"}


id: PBO:0042809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 3 for miR-645","termid":"PBO:0042809"}


id: PBO:0086078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to globins; has a functional heme-binding domain; mutant has aneuploidy tolerance; transcription induced by stress conditions; may be involved in glucose signaling or metabolism; regulated by Rgt1","termid":"PBO:0086078"}


id: GO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron are generated and organized. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron morphogenesis","termid":"GO:0072028"}


id: GO:0019724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells.","definition_xrefs":["ISBN:0781735149","GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell mediated immunity","synonyms":[{"name":"B lymphocyte mediated immune effector process","type":"exact"},{"name":"B lymphocyte mediated immunity","type":"exact"},{"name":"B-cell mediated immune effector process","type":"exact"},{"name":"B-cell mediated immunity","type":"exact"},{"name":"B-lymphocyte mediated immune effector process","type":"exact"},{"name":"B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0019724"}


id: GO:0051323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase or prometaphase in higher eukaryotes, during which chromosomes become aligned on the equatorial plate of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metaphase","secondary_identifiers":["Wikipedia:Metaphase"],"termid":"GO:0051323"}


id: PR:Q96TL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96TL7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein rap1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.02","synonyms":[{"name":"Spom972h-rap1","type":"exact"}],"termid":"PR:Q96TL7"}


id: GO:0005128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an erythropoietin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"erythropoietin receptor binding","synonyms":[{"name":"erythropoietin","type":"narrow"},{"name":"erythropoietin receptor ligand","type":"narrow"}],"termid":"GO:0005128"}


id: GO:1905903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:23939491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesoderm formation","termid":"GO:1905902"},{"relation_name":"is_a","term_name":"negative regulation of mesoderm development","termid":"GO:2000381"},{"relation_name":"negatively_regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesoderm formation","synonyms":[{"name":"down regulation of mesoderm formation","type":"exact"},{"name":"down-regulation of mesoderm formation","type":"exact"},{"name":"downregulation of mesoderm formation","type":"exact"},{"name":"inhibition of mesoderm formation","type":"narrow"}],"termid":"GO:1905903"}


id: FYPO:0000301
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115227,115230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000760"},{"annotations":[115438,115442,115445,115515,115447,115437,115431,115461,115463,115448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000280"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype that affects conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process 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phenotype","references_by_uniquename":{"PMID:29566183":null,"PMID:31150379":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_04009","SJAG_00514","SJAG_01794","SJAG_02379","SJAG_00993","SJAG_03453","SJAG_02486","SJAG_02592","SJAG_02923","SJAG_01718","SJAG_00601"],"single_locus_genotype_uniquenames":["byr1delta","spk1delta","byr2delta","scd1delta","rip1delta","gap1delta","ste11delta","ras1delta","scd2delta","sty1delta","cox6delta","ste6delta"],"synonyms":[{"name":"conjugation phenotype","type":"exact"},{"name":"fission yeast mating phenotype","type":"exact"}],"termid":"FYPO:0000301","terms_by_termid":{"FYECO:0000015":null,"FYECO:0000272":null,"FYPO:0000280":null,"FYPO:0000760":null,"FYPO_EXT:0000001":null}}


id: PBO:0026697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026697"}


id: PBO:0053966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1276","termid":"PBO:0053966"}


id: PBO:0086356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 1,3-beta-glucanosyltransferase; has similarity go other GAS family members; low abundance, possibly inactive member of the GAS family of GPI-containing proteins; localizes to the cell wall; mRNA induced during sporulation","termid":"PBO:0086356"}


id: SO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes out of frame elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_N_terminal","termid":"SO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_out_of_frame_polypeptide_N_terminal","synonyms":[{"name":"elongated out of frame N terminal","type":"exact"}],"termid":"SO:0001615"}


id: FYPO:0006584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to shmoo tip membrane","synonyms":[{"name":"abnormal protein localisation to shmoo tip membrane","type":"exact"},{"name":"abnormal protein localization to mating projection tip membrane","type":"exact"},{"name":"abnormal protein localization to plasma membrane at shmoo tip","type":"exact"},{"name":"abnormal protein localization to shmoo membrane fusion domain","type":"exact"},{"name":"abnormal protein localization to shmoo projection membrane","type":"related"}],"termid":"FYPO:0006584"}


id: GO:1902180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of verruculogen.","definition_xrefs":["PMID:23649274","GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete verruculogen catabolic process (obsolete GO:1902180)","synonyms":[{"name":"verruculogen breakdown","type":"exact"},{"name":"verruculogen catabolism","type":"exact"},{"name":"verruculogen degradation","type":"exact"}],"termid":"GO:1902180"}


id: GO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitroimidazoles, imidazole derivatives with a nitro group attached to one ring.","definition_xrefs":["PMID:16387854","PMID:19039139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroimidazole metabolic process","synonyms":[{"name":"nitroimidazole metabolism","type":"exact"}],"termid":"GO:0052802"}


id: GO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the inhibition or termination of the activity of protein kinase C.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"protein kinase C deactivation","synonyms":[{"name":"PKC deactivation","type":"exact"}],"termid":"GO:0042313"}


id: FYECO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and 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were performed in medium containing glucose (typically <2% w/v), salts, and water, and may be supplemented with additional amino acids.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined 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MM","references_by_uniquename":{"PMID:23873862":null,"PMID:30664646":null,"PMID:31956022":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYECO:0000014"],"single_locus_annotated_genes":["SJAG_02796","SJAG_02860","SJAG_04522","SJAG_02527","SJAG_05242","SJAG_01355","SJAG_00601","SJAG_01753","SJAG_03920","SJAG_04697","SJAG_00409","SJAG_01458","SJAG_04843"],"single_locus_genotype_uniquenames":["gms1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","mdh1delta","sdh3delta","rip1delta","fum1delta","gpd1delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","wcs1delta","wcs2delta","rga4delta","cox6delta","acb1delta"],"synonyms":[{"name":"EMM","type":"narrow"},{"name":"EMMC","type":"narrow"},{"name":"SD medium","type":"exact"},{"name":"glucose minimal medium","type":"exact"},{"name":"normal glucose MM","type":"exact"},{"name":"normal glucose minimal medium","type":"exact"},{"name":"standard glucose minimal medium","type":"exact"}],"termid":"FYECO:0000126","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1900171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucocorticoid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid mediated signaling pathway","termid":"GO:1900169"},{"relation_name":"positively_regulates","term_name":"glucocorticoid mediated signaling pathway","termid":"GO:0043402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucocorticoid mediated signaling pathway","synonyms":[{"name":"activation of glucocorticoid mediated signaling pathway","type":"narrow"},{"name":"activation of glucocorticoid mediated signalling","type":"narrow"},{"name":"positive regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"upregulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"upregulation of glucocorticoid mediated signalling","type":"exact"}],"termid":"GO:1900171"}


id: PR:Q9C0Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.07c gene.","definition_xrefs":["UniProtKB:Q9C0Y7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB24D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.07c","synonyms":[{"name":"Spom972h-SPAPB24D3.07c","type":"exact"}],"termid":"PR:Q9C0Y7"}


id: PBO:0062918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y2","termid":"PBO:0062918"}


id: PBO:0005859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Puf family RNA-binding protein Puf6 (predicted)","termid":"PBO:0005859"}


id: GO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the stamen are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen morphogenesis","secondary_identifiers":["GO:0048426"],"termid":"GO:0048448"}


id: PBO:0038650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACOXL antisense RNA 1","termid":"PBO:0038650"}


id: GO:0009265
data:
  {"annotated_genes":["SJAG_04627","SJAG_04487","SJAG_03771","SJAG_02874","SJAG_02948","SJAG_04657","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70994],"is_not":false,"summary":null,"term":"GO:0009265"},{"annotations":[88642,91691,103449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[85608,104571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[88643,114168,85609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[114169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[95175,104572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a 2'-deoxyribonucleotide, a compound consisting of 2'-deoxyribonucleoside (a base linked to a 2'-deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleotide biosynthetic process","termid":"GO:0009263"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"},{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"2'-deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"2'-deoxyribonucleotide anabolism","type":"exact"},{"name":"2'-deoxyribonucleotide biosynthesis","type":"exact"},{"name":"2'-deoxyribonucleotide formation","type":"exact"},{"name":"2'-deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009265","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: PBO:0071869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 7","termid":"PBO:0071869"}


id: GO:2000575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microtubule motor activity (obsolete GO:2000575)","synonyms":[{"name":"negative regulation of axonemal motor activity","type":"related"},{"name":"negative regulation of dynein","type":"related"},{"name":"negative regulation of dynein ATPase activity","type":"related"},{"name":"negative regulation of kinesin","type":"related"},{"name":"negative regulation of kinesin motor activity","type":"related"},{"name":"negative regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000575"}


id: PBO:0085829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion localizes to the ER; YEL001C is non-essential; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0085829"}


id: PBO:0058030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4251","termid":"PBO:0058030"}


id: PBO:0040508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin","termid":"PBO:0040508"}


id: FYPO:0007366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2,3-bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular bisphosphoglyceric acid level","termid":"FYPO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular 2,3-bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular 2,3-bisphosphoglycerate level","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular 2-/3-bisphosphoglyceric acid level","type":"exact"},{"name":"decreased level of 2,3-bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular 2,3-bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0007366"}


id: PBO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (predicted)","termid":"PBO:0000418"}


id: PBO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035735"}


id: GO:0042667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an auditory hair cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"auditory receptor cell fate commitment","termid":"GO:0009912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate specification","synonyms":[{"name":"auditory hair cell fate specification","type":"exact"}],"termid":"GO:0042667"}


id: FYPO:0006627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"normal 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"normal plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"normal plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"}],"termid":"FYPO:0006627"}


id: PR:Q10275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mba1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.11","synonyms":[{"name":"Spom972h-mba1","type":"exact"}],"termid":"PR:Q10275"}


id: PBO:0063622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, platelet","termid":"PBO:0063622"}


id: PBO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 4","termid":"PBO:0070774"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: PR:O42991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.13c","synonyms":[{"name":"Spom972h-rpl1601","type":"exact"}],"termid":"PR:O42991"}


id: PBO:0029602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transporter_activity","termid":"PBO:0029602"}


id: GO:0052918
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87338],"is_not":false,"summary":null,"term":"GO:0052918"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->6))-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl D-mannosyl phosphate = H+ + alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->6))-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate.","definition_xrefs":["EC:2.4.1.261","RHEA:29539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R06261","MetaCyc:RXN-5469"],"termid":"GO:0052918","terms_by_termid":{"GO:0052918":null}}


id: GO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to laminin 5.","definition_xrefs":["GOC:mah","PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta4 integrin-laminin 5 complex","synonyms":[{"name":"ITGA6-ITGB4-LAMA5 complex","type":"narrow"},{"name":"alpha6-beta4 integrin-laminin-332 complex","type":"exact"}],"termid":"GO:0070334"}


id: SO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001432 sequence_variant_affecting_polyadenylation (obsolete SO:0001432)","synonyms":[{"name":"mutation affecting polyadenylation","type":"related"},{"name":"sequence variant affecting polyadenylation","type":"exact"}],"termid":"SO:0001432"}


id: PBO:0061473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding protein 2","termid":"PBO:0061473"}


id: FYPO:0006554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nucleus during nitrogen starvation","synonyms":[{"name":"normal protein localisation to nucleus during nitrogen starvation","type":"exact"},{"name":"normal protein localization to nucleus during nitrogen depletion","type":"exact"},{"name":"normal protein localization to nucleus during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006554"}


id: GO:0031538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin metabolic process","synonyms":[{"name":"down regulation of anthocyanin metabolic process","type":"exact"},{"name":"down-regulation of anthocyanin metabolic process","type":"exact"},{"name":"downregulation of anthocyanin metabolic process","type":"exact"},{"name":"inhibition of anthocyanin metabolic process","type":"narrow"},{"name":"negative regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031538"}


id: PBO:0075772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 3","termid":"PBO:0075772"}


id: GO:1904053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GOC:pad","GO_REF:0000058","GOC:PARL","PMID:22020285","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"positively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"activation of protein targeting to vacuole involved in autophagy","type":"narrow"},{"name":"up regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"up-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"upregulation of protein targeting to vacuole involved in autophagy","type":"exact"}],"termid":"GO:1904053"}


id: PBO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt4","termid":"PBO:0002770"}


id: GO:0090503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis, exonucleolytic (obsolete GO:0090503)","termid":"GO:0090503"}


id: PBO:0047463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 4","termid":"PBO:0047463"}


id: PR:O43046
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03956","PANTHER:PTHR13861:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.18c","secondary_identifiers":["UniProtKB:O43046"],"synonyms":[{"name":"Spom972h-ATP6V1F","type":"exact"},{"name":"V-ATPase subunit F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit F (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43046"}


id: GO:0140794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone 3 L-arginyl = histone 3 L-citrullyl + NH4+, resulting in histone citrullination.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine deiminase activity","termid":"GO:0004668"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"histone arginine deiminase activity","synonyms":[{"name":"histone citrullination","type":"related"},{"name":"histone-arginine deiminase activity","type":"exact"}],"termid":"GO:0140794"}


id: PBO:0075848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssu-2 homolog","termid":"PBO:0075848"}


id: PATO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001123 relative power value (obsolete PATO:0001123)","termid":"PATO:0001123"}


id: GO:0010101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the post-embryonic root are generated and organized. The post-embryonic root is the root formed after the embryonic phase has been completed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"},{"relation_name":"part_of","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic root morphogenesis","termid":"GO:0010101"}


id: PBO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine accumulation causes a defect in purine biosynthesis","termid":"PBO:0001000"}


id: PBO:0036244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ubiquitin-protein ligase E3 subunit Mot2","termid":"PBO:0036244"}


id: GO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"synaptic cleft","secondary_identifiers":["NIF_Subcellular:sao243541954"],"termid":"GO:0043083"}


id: PBO:0068608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 59, pseudogene","termid":"PBO:0068608"}


id: PR:O13719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf1 gene.","definition_xrefs":["UniProtKB:O13719","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.12c","synonyms":[{"name":"Spom972h-laf1","type":"exact"},{"name":"clr6 L-associated factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13719"}


id: FYPO:0006909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle occurs at a smaller cell size than normal after the cell has been arrested in G1 phase due to nitrogen starvation. The cell remains arrested in G1.","definition_xrefs":["PomBase:mah","PMID:872890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mitotic G1/S phase transition at small cell size","synonyms":[{"name":"G1/S phase transition at small cell size during mitotic cell cycle","type":"exact"},{"name":"mitotic G1/S phase transition at abnormally small cell size","type":"exact"},{"name":"mitotic G1/S phase transition at small cell size during vegetative growth","type":"exact"},{"name":"small cell size at G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006909"}


id: GO:1990441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","PMID:21113145","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990441)","synonyms":[{"name":"ER stress-induced negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"reduction of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"repression of transcription from RNA polymerase II promoter under ER stress","type":"exact"},{"name":"suppression of transcription from RNA polymerase II promoter under ER stress","type":"exact"}],"termid":"GO:1990441"}


id: GO:0051672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the cell wall peptidoglycans of another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall peptidoglycan in other organism (obsolete GO:0051672)","synonyms":[{"name":"catabolic process of cell wall peptidoglycans of other organism","type":"exact"},{"name":"catabolism of cell wall peptidoglycans of other organism","type":"exact"},{"name":"cell wall catabolic process in other organism","type":"narrow"},{"name":"cell wall catabolism in other organism","type":"narrow"},{"name":"cell wall peptidoglycan catabolic process in another organism","type":"exact"}],"termid":"GO:0051672"}


id: FYPO:0001530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal GTPase activity","termid":"FYPO:0001530"}


id: GO:0015794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycerol-3-phosphate is transported across a membrane. Glycerol-3-phosphate is a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate transmembrane transport","synonyms":[{"name":"glycerol-3-phosphate transport","type":"related"}],"termid":"GO:0015794"}


id: SO:1001260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Shine-Dalgarno sequence that stimulates recoding through interactions with the anti-Shine-Dalgarno in the RNA of small ribosomal subunits of translating ribosomes. The signal is only operative in Bacteria.","definition_xrefs":["PMID:12519954","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal_ribosome_entry_site","termid":"SO:0000243"},{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_Shine_Dalgarno_sequence","synonyms":[{"name":"internal Shine Dalgarno sequence","type":"exact"},{"name":"internal Shine-Dalgarno sequence","type":"exact"}],"termid":"SO:1001260"}


id: GO:0072251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}


id: PBO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-9","termid":"PBO:0051429"}


id: GO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of transition metal ions within a cell. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular transition metal ion homeostasis (obsolete GO:0046916)","synonyms":[{"name":"cellular transition metal ion homeostasis","type":"exact"}],"termid":"GO:0046916"}


id: PBO:0108984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 8","termid":"PBO:0108984"}


id: GO:1990680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a melanocyte-stimulating hormone stimulus. The binding of any one of three melanocyte-stimulating hormones causes dispersal of melanosomes in melanophores of poikilothermic vertebrates.","definition_xrefs":["PMID:17036007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to melanocyte-stimulating hormone","synonyms":[{"name":"response to MSH","type":"exact"}],"termid":"GO:1990680"}


id: PR:Q9C0Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPBPB10D8.04c/SPBPB10D8.05c/SPBPB10D8.06c/SPBPB10D8.07c.","definition_xrefs":["UniProtKB:Q9C0Q1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter PB10D8.04c/PB10D8.05c/PB10D8.06c/PB10D8.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB10D8.07c","synonyms":[{"name":"Spom972h-SPBPB10D8.07c","type":"exact"}],"termid":"PR:Q9C0Q1"}


id: PBO:0054436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1832","termid":"PBO:0054436"}


id: PBO:0074593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 7A","termid":"PBO:0074593"}


id: GO:0000448
data:
  {"annotated_genes":["SJAG_03789","SJAG_02374","SJAG_02275","SJAG_01581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87893,91154,100301,114699],"is_not":false,"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000490"],"synonyms":[{"name":"cleavage at C2","type":"related"},{"name":"cleavage in ITS2 of tricistronic rRNA transcript to separate 5.8S and LSU rRNAs (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"GO:0000448","terms_by_termid":{"GO:0000448":null}}


id: PBO:0042530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 pseudogene 1","termid":"PBO:0042530"}


id: PBO:0063429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 3","termid":"PBO:0063429"}


id: PBO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 1","termid":"PBO:0044220"}


id: GO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesol = 2-cis,6-trans-farnesol.","definition_xrefs":["RHEA:13401","EC:5.2.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"farnesol 2-isomerase activity","secondary_identifiers":["KEGG_REACTION:R03265","MetaCyc:FARNESOL-2-ISOMERASE-RXN"],"synonyms":[{"name":"2-trans,6-trans-farnesol 2-cis-trans-isomerase activity","type":"related"},{"name":"farnesol isomerase activity","type":"related"}],"termid":"GO:0047885"}


id: GO:0018968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofuran, a cyclic 4 carbon ether. It is one of the most polar ethers and is a widely used solvent for polar reagents. Since THF is very soluble in water and has a relatively low boiling point, significant amounts are often released into the environment, causing contamination problems.","definition_xrefs":["UM-BBD_pathwayID:thf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrahydrofuran metabolic process","synonyms":[{"name":"THF metabolic process","type":"exact"},{"name":"THF metabolism","type":"exact"},{"name":"tetrahydrofuran metabolism","type":"exact"}],"termid":"GO:0018968"}


id: MOD:01480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 5'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-fluoro-L-tryptophan","synonyms":[{"name":"5-fluorotryptophan","type":"exact"}],"termid":"MOD:01480"}


id: PBO:0070603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 71","termid":"PBO:0070603"}


id: FYPO:0000392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the metaphase/anaphase transition under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest at mitotic metaphase/anaphase transition (obsolete FYPO:0000392)","synonyms":[{"name":"abnormal cell cycle arrest at metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase arrest","type":"exact"},{"name":"cell cycle passage through the metaphase-anaphase transition: arrested","type":"related"}],"termid":"FYPO:0000392"}


id: PBO:0060408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 25, NatB auxiliary subunit","termid":"PBO:0060408"}


id: GO:0002953
data:
  {"annotated_genes":["SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113336],"is_not":false,"summary":null,"term":"GO:0002953"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction:a 2'-deoxyribonucleoside 5'-monophosphate + H20=a 2'-deoxyribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5'-deoxynucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002953","terms_by_termid":{"GO:0002953":null}}


id: PBO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 25","termid":"PBO:0072094"}


id: GO:1905581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein particle clearance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:nc","PMID:22848640","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle clearance","termid":"GO:0010988"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle clearance","termid":"GO:0034383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle clearance","synonyms":[{"name":"activation of LDL clearance","type":"narrow"},{"name":"activation of low-density lipoprotein particle clearance","type":"narrow"},{"name":"positive regulation of LDL clearance","type":"exact"},{"name":"up regulation of LDL clearance","type":"exact"},{"name":"up regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"up-regulation of LDL clearance","type":"exact"},{"name":"up-regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"upregulation of LDL clearance","type":"exact"},{"name":"upregulation of low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:1905581"}


id: PBO:0055726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMNTD2 antisense RNA 1","termid":"PBO:0055726"}


id: PBO:0075884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 2","termid":"PBO:0075884"}


id: PBO:0068468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 45, pseudogene","termid":"PBO:0068468"}


id: GO:2000129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of octopamine or tyramine signaling pathway","termid":"GO:2000126"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"negatively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of octopamine signaling pathway","synonyms":[{"name":"negative regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000129"}


id: PBO:0070257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 2, pseudogene","termid":"PBO:0070257"}


id: GO:0051380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to norepinephrine, (3,4-dihydroxyphenyl-2-aminoethanol), a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"norepinephrine binding","synonyms":[{"name":"noradrenaline binding","type":"exact"}],"termid":"GO:0051380"}


id: PBO:0059405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 2","termid":"PBO:0059405"}


id: PBO:0060656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor corepressor 2","termid":"PBO:0060656"}


id: GO:0051784
data:
  {"annotated_genes":["SJAG_01837","SJAG_04126","SJAG_04999","SJAG_02451","SJAG_03681","SJAG_00364","SJAG_03327","SJAG_01330","SJAG_03529","SJAG_03126","SJAG_04699","SJAG_01679","SJAG_04884","SJAG_03353","SJAG_00883","SJAG_01082","SJAG_00266","SJAG_01680","SJAG_03438","SJAG_02169","SJAG_04259","SJAG_02336","SJAG_04287","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95765,100082,110453,86944,103420,104447,108153,112079,109978],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102496,110681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[110443,102800,112242,76996,85292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[95618,106108,110685,86946,111727,112853,97981,109982,102498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111728,102499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90398],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[109983],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112857],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97515],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90399],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"negatively_regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nuclear division","type":"exact"},{"name":"down-regulation of nuclear division","type":"exact"},{"name":"downregulation of nuclear division","type":"exact"},{"name":"inhibition of nuclear division","type":"narrow"}],"termid":"GO:0051784","terms_by_termid":{"GO:0007094":null,"GO:0045128":null,"GO:0045841":null,"GO:0051598":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of chaperonin-containing T-complex","termid":"PBO:0004307"}


id: GO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-tRNA(Sec) = ADP + O-phospho-L-seryl-tRNA(Sec).","definition_xrefs":["GOC:jl","PMID:16201757","RHEA:25037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016301","GO:0140101","GO:0140098","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"L-seryl-tRNA(Sec) kinase activity","secondary_identifiers":["EC:2.7.1.164","MetaCyc:RXN-10038"],"synonyms":[{"name":"O-phosphoseryl-tRNA(Sec) kinase activity","type":"exact"}],"termid":"GO:0043915"}


id: GO:0090106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic E cell fate and its capacity to differentiate into a pancreatic E cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pancreatic epsilon cell differentiation","termid":"GO:0090104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic E cell fate commitment","termid":"GO:0090106"}


id: PBO:0065182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein S (beta) pseudogene","termid":"PBO:0065182"}


id: PBO:0062534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 3 pseudogene","termid":"PBO:0062534"}


id: GO:1903554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that is involved in the defense response to Gram-negative bacterium.","definition_xrefs":["GO_REF:0000060","GOC:kmv","GOC:TermGenie","PMID:25303524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in defense response to Gram-negative bacterium","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1903554"}


id: PBO:0090181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK catalytic (alpha) subunit Ssp2","termid":"PBO:0090181"}


id: SO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which, when transcribed, can be translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding","synonyms":[{"name":"protein-coding","type":"exact"}],"termid":"SO:0000010"}


id: PBO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7 (predicted)","termid":"PBO:0002093"}


id: PBO:0074524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA B2","termid":"PBO:0074524"}


id: PBO:0011162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP-glucose-1-phosphate uridylyltransferase-like","termid":"PBO:0011162"}


id: PBO:0066487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFPL3 antisense","termid":"PBO:0066487"}


id: GO:1904062
data:
  {"annotated_genes":["SJAG_00296","SJAG_04551","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87424,109558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15304482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"regulates","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of monoatomic cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cation transmembrane transport","type":"broad"}],"termid":"GO:1904062","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PATO:0001406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binucleate","termid":"PATO:0001406"}


id: FYPO:0002395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin at centromere outer repeat","termid":"FYPO:0002386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"abnormal maintenance of protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentric region","type":"related"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"decreased maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced maintenance of protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002395"}


id: GO:0070646
data:
  {"annotated_genes":["SJAG_02341","SJAG_00720","SJAG_04011","SJAG_00776","SJAG_00795","SJAG_03733","SJAG_03325","SJAG_04948","SJAG_02764","SJAG_05977"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89202,106530,85865,102671,87657,91496,105191,101470,97494,89087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more covalently attached groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are removed from a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein modification by small protein removal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070646","terms_by_termid":{"GO:0000338":null}}


id: GO:0015439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + heme(in) = ADP + phosphate + heme(out).","definition_xrefs":["RHEA:19261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transmembrane transporter activity","termid":"GO:0015232"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type heme transporter activity","secondary_identifiers":["Reactome:R-HSA-917979","Reactome:R-HSA-382560","MetaCyc:3.6.3.41-RXN","GO:0103115","Reactome:R-HSA-1369065","EC:7.6.2.5","Reactome:R-HSA-5683355"],"synonyms":[{"name":"ATP-dependent heme transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled heme transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled heme transporter activity","type":"related"},{"name":"haem-transporting ATPase activity","type":"exact"},{"name":"heme ABC transporter","type":"narrow"},{"name":"heme-transporting ATPase activity","type":"exact"},{"name":"protoheme IX ABC transporter activity","type":"related"}],"termid":"GO:0015439"}


id: PBO:0041926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 1","termid":"PBO:0041926"}


id: GO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-lactate from methylglyoxal, via the intermediate (R)-lactaldehyde.","definition_xrefs":["MetaCyc:MGLDLCTANA-PWY","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"D-lactate biosynthetic process from methylglyoxal via (R)-lactaldehyde","synonyms":[{"name":"D-lactate anabolism from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate formation from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate synthesis from methylglyoxal via (R)-lactaldehyde","type":"exact"}],"termid":"GO:0019248"}


id: PBO:0061962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 41 pseudogene","termid":"PBO:0061962"}


id: FYPO:0004617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["GO:0036078","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased rate of microtubule depolymerization at minus end (obsolete FYPO:0004617)","synonyms":[{"name":"decreased microtubule stability","type":"related"},{"name":"increased microtubule depolymerization rate at minus end","type":"exact"},{"name":"increased microtubule minus end shrinkage","type":"related"},{"name":"increased rate of microtubule catastrophe at minus end","type":"related"},{"name":"increased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"increased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"increased rate of minus-end specific microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004617"}


id: PBO:0038928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L2","termid":"PBO:0038928"}


id: PBO:0065798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing like","termid":"PBO:0065798"}


id: PBO:0040379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit OSCP","termid":"PBO:0040379"}


id: GO:0180025
data:
  {"annotated_genes":["SJAG_04524","SJAG_01169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109269,103814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cytosolic small ribosomal subunit.","definition_xrefs":["PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal small subunit assembly","termid":"GO:0000028"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"cytosolic small ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180025","terms_by_termid":{"GO:0034462":null}}


id: GO:0047708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biotin amide + H2O = biotin + NH3.","definition_xrefs":["MetaCyc:BIOTINIDASE-RXN","EC:3.5.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"biotinidase activity","secondary_identifiers":["RHEA:13081","Reactome:R-HSA-4167509","Reactome:R-HSA-3325540","Reactome:R-HSA-3076905","Reactome:R-HSA-4225086"],"synonyms":[{"name":"amidohydrolase biotinidase activity","type":"related"},{"name":"biotin-amide amidohydrolase activity","type":"related"}],"termid":"GO:0047708"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: PBO:0030063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphoglycerate_mutase_activity","termid":"PBO:0030063"}


id: GO:0071624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of granulocyte chemotaxis. Granulocyte chemotaxis is the movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"positively_regulates","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"}


id: RO:HOM0000025
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and one of its ortholog in species B, when duplications more recent than the species split have occurred in species B but not in species A.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pro-orthology_relationship_with","synonyms":[{"name":"pro-orthologous to","type":"exact"}],"termid":"RO:HOM0000025"}


id: PR:Q9UUJ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.02c","synonyms":[{"name":"PvGal synthesis protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg5","type":"exact"},{"name":"meiotically up-regulated gene 50 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ0"}


id: GO:0033550
data:
  {"annotated_genes":["SJAG_03263","SJAG_02000","SJAG_02013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87862,91237,99995],"is_not":false,"summary":null,"term":"GO:0033550"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase tyrosine phosphate + H2O = MAP kinase tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016788","GO:0004721","GO:0016787"],"is_obsolete":false,"name":"MAP kinase tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tyrosine-specific MAP kinase phosphatase activity","type":"exact"}],"termid":"GO:0033550","terms_by_termid":{"GO:0033550":null}}


id: PBO:0073369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 2","termid":"PBO:0073369"}


id: PR:O74542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.03c gene.","definition_xrefs":["UniProtKB:O74542","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C777.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.03c","synonyms":[{"name":"Spom972h-SPCC777.03c","type":"exact"}],"termid":"PR:O74542"}


id: GO:0106012
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to the medial cortex.","definition_xrefs":["GOC:hjd","PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell cortex","termid":"GO:1904778"},{"relation_name":"positively_regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106012","terms_by_termid":{"GO:0120047":null}}


id: GO:0006983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB.","definition_xrefs":["PMID:10390516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ER overload response","secondary_identifiers":["GO:0006985"],"synonyms":[{"name":"EOR","type":"exact"},{"name":"EOR-mediated NF-kappaB activation","type":"narrow"},{"name":"EOR-mediated activation of NF-kappaB","type":"narrow"},{"name":"ER-overload response","type":"exact"},{"name":"endoplasmic reticulum overload response","type":"exact"},{"name":"positive regulation of NF-kappaB transcription factor activity by EOR","type":"narrow"},{"name":"positive regulation of NF-kappaB transcription factor activity by ER overload response","type":"narrow"}],"termid":"GO:0006983"}


id: SO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby new or enhanced function is conferred on the gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gain_of_function_variant","synonyms":[{"name":"gain of function variant","type":"exact"}],"termid":"SO:0002053"}


id: GO:0035312
data:
  {"annotated_genes":["SJAG_01648","SJAG_01832","SJAG_03734","SJAG_01173","SJAG_04410","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84643,89196,93326],"is_not":false,"summary":null,"term":"GO:0035312"},{"annotations":[111856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[103954,93329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[93331,107781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a DNA molecule.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' exonuclease activity","termid":"GO:0008409"},{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03734":null,"SJAG_04410":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0004527","GO:0016788","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-3' exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0035312","terms_by_termid":{"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: PBO:0050364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 67","termid":"PBO:0050364"}


id: GO:0032333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of activin, a nonsteroidal regulator composed of two covalently linked beta subunits, which is synthesized in the pituitary gland and gonads and stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"activin secretion","termid":"GO:0032333"}


id: PBO:0052243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 13","termid":"PBO:0052243"}


id: GO:0043098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a purine deoxyribonucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}


id: PBO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 2","termid":"PBO:0044591"}


id: PBO:0058769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6893","termid":"PBO:0058769"}


id: GO:0010184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cytokinin transport","termid":"GO:0010184"}


id: FYPO:0007330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to formaldehyde. Cells stop growing (and may die) at a concentration of formaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to formaldehyde","synonyms":[{"name":"hypersensitive to formaldehyde","type":"exact"},{"name":"sensitive to formaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to formaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0007330"}


id: PBO:0087350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body (SPB) component; required for the insertion of the duplication plaque into the nuclear membrane during SPB duplication; essential for bipolar spindle formation; component of the Mps2p-Bbp1p complex; NBP1 has a paralog, YPR174C, that arose from the whole genome duplication","termid":"PBO:0087350"}


id: PBO:0091203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp","termid":"PBO:0091203"}


id: PBO:0052392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin associated protein 3","termid":"PBO:0052392"}


id: PBO:0091387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glomulin, ubiquitin-protein transferase inhibitor Glm1","termid":"PBO:0091387"}


id: PBO:0080580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5 divergent transcript","termid":"PBO:0080580"}


id: PBO:0039165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 8","termid":"PBO:0039165"}


id: PBO:0026820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_endosome","termid":"PBO:0026820"}


id: PBO:0111650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller SMARCAD1 family Fft2","termid":"PBO:0111650"}


id: GO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of S-methylmethionine from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"S-methylmethionine transmembrane transporter activity","secondary_identifiers":["GO:0015178"],"synonyms":[{"name":"S-methylmethionine permease activity","type":"exact"},{"name":"S-methylmethionine transporter activity","type":"broad"}],"termid":"GO:0000100"}


id: SO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL11 RNA leader sequence to the 5' end of an mRNA. SL11 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL11_acceptor_site","synonyms":[{"name":"SL11 acceptor site","type":"exact"}],"termid":"SO:0001756"}


id: GO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling involved in heart development","synonyms":[{"name":"Notch signalling involved in heart development","type":"exact"}],"termid":"GO:0061314"}


id: GO:0089700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase D, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase D signaling (obsolete GO:0089700)","synonyms":[{"name":"PKD signal transduction","type":"exact"},{"name":"PKD signaling cascade","type":"related"},{"name":"protein kinase D signal transduction","type":"exact"},{"name":"protein kinase D signaling cascade","type":"related"},{"name":"protein kinase D signalling cascade","type":"related"}],"termid":"GO:0089700"}


id: GO:0048440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the carpel over time, from its formation to the mature structure. A carpel is an organ (generally believed to be a modified foliar unit) at the centre of a flower, bearing one or more ovules and having its margins fused together or with other carpels to enclose the ovule in an ovary, and consisting also of a stigma and usually a style.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"gynoecium development","termid":"GO:0048467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel development","secondary_identifiers":["GO:0048429"],"termid":"GO:0048440"}


id: GO:0009413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating flooding, short-term immersion in water.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flooding","termid":"GO:0009413"}


id: PBO:0091475
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3450131delT","termid":"PBO:0091475"}


id: PBO:0057516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 634","termid":"PBO:0057516"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: GO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar ribonucleoprotein (obsolete GO:0030355)","synonyms":[{"name":"small nucleolar ribonucleoprotein","type":"exact"},{"name":"snoRNP","type":"exact"}],"termid":"GO:0030355"}


id: GO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"kidney rudiment formation","termid":"GO:0072003"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros formation","synonyms":[{"name":"pronephric kidney formation","type":"exact"}],"termid":"GO:0072116"}


id: PBO:0056307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 3","termid":"PBO:0056307"}


id: GO:0014857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation.","definition_xrefs":["GOC:mtg_muscle","CL:0000188","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"}


id: PBO:0088981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L43","termid":"PBO:0088981"}


id: GO:0097274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete urea homeostasis (obsolete GO:0097274)","termid":"GO:0097274"}


id: PBO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035711"}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: PBO:0082709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic60p is also involved in import of intermembrane space (IMS) proteins, probably by positioning Mia40p relative to the TOM complex to receive incoming proteins; ortholog of mammalian mitofilin","termid":"PBO:0082709"}


id: PBO:0090921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane mannan endo-1,6-alpha-mannosidase Dfg501","termid":"PBO:0090921"}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["RHEA:19977","EC:2.8.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["GO:0008128","MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN","KEGG_REACTION:R04213"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: GO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of sucrose.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar mediated signaling pathway","termid":"GO:0010182"},{"relation_name":"part_of","term_name":"cellular response to sucrose stimulus","termid":"GO:0071329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sucrose mediated signaling","synonyms":[{"name":"sucrose mediated signalling","type":"exact"}],"termid":"GO:0009745"}


id: GO:0090029
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89520],"is_not":false,"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0010969"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060240"},{"relation_name":"negatively_regulates","term_name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0000750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0023052"],"is_obsolete":false,"name":"negative regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090029","terms_by_termid":{"GO:0090029":null}}


id: GO:0009811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of stilbenes, a class of polyketide compounds formed from cinnamic acid and three molecules of malonyl CoA.","definition_xrefs":["GOC:tair_curators","ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stilbene metabolic process","termid":"GO:0009810"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene biosynthetic process","synonyms":[{"name":"stilbene anabolism","type":"exact"},{"name":"stilbene biosynthesis","type":"exact"},{"name":"stilbene formation","type":"exact"},{"name":"stilbene synthesis","type":"exact"}],"termid":"GO:0009811"}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"activated complement C1r","type":"related"},{"name":"C1r esterase activity","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


id: PBO:0080085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP46 divergent transcript","termid":"PBO:0080085"}


id: PBO:0079430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon 1","termid":"PBO:0079430"}


id: GO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process that results in the formation of one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells during the various stages of oogenesis.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum","synonyms":[{"name":"ovarian follicle antrum/follicular fluid biosynthesis","type":"exact"},{"name":"ovarian follicle antrum/follicular fluid formation","type":"exact"}],"termid":"GO:0001548"}


id: GO:0050134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-methyl-L-lysine + H2O + O2 = L-lysine + formaldehyde + H2O2.","definition_xrefs":["RHEA:23200","EC:1.5.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N6-methyl-lysine oxidase activity","secondary_identifiers":["KEGG_REACTION:R00612","MetaCyc:N6-METHYL-LYSINE-OXIDASE-RXN"],"synonyms":[{"name":"6-N-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N(6)-methyllysine oxidase activity","type":"related"},{"name":"N6-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N6-methyllysine oxidase activity","type":"related"},{"name":"epsilon-N-methyllysine demethylase activity","type":"related"},{"name":"epsilon-alkyl-L-lysine:oxygen oxidoreductase activity","type":"related"},{"name":"epsilon-alkyllysinase activity","type":"related"}],"termid":"GO:0050134"}


id: GO:1902476
data:
  {"annotated_genes":["SJAG_03401","SJAG_01168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101878,107854],"is_not":false,"summary":null,"term":"GO:1902476"}]},"cv_name":"biological_process","definition":"The process in which chloride is transported across a membrane.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transport","termid":"GO:0006821"},{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01168":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"chloride transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902476","terms_by_termid":{"GO:1902476":null}}


id: PBO:0057450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 570","termid":"PBO:0057450"}


id: GO:1905799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["PMID:27930654","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intraciliary retrograde transport","synonyms":[{"name":"regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905799"}


id: FYPO:0000294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any RNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"RNA metabolism phenotype","synonyms":[{"name":"RNA metabolism phenotype during mitotic cell cycle","type":"related"},{"name":"RNA metabolism phenotype during vegetative growth","type":"exact"},{"name":"fission yeast RNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000294"}


id: GO:0042952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.","definition_xrefs":["PMID:8905091","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"beta-ketoadipate pathway","synonyms":[{"name":"ortho-cleavage pathway","type":"broad"}],"termid":"GO:0042952"}


id: GO:0045747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Notch signaling pathway","synonyms":[{"name":"activation of Notch signaling pathway","type":"narrow"},{"name":"positive regulation of N signaling pathway","type":"exact"},{"name":"positive regulation of N signalling pathway","type":"exact"},{"name":"positive regulation of Notch signalling pathway","type":"exact"},{"name":"stimulation of Notch signaling pathway","type":"narrow"},{"name":"up regulation of Notch signaling pathway","type":"exact"},{"name":"up-regulation of Notch signaling pathway","type":"exact"},{"name":"upregulation of Notch signaling pathway","type":"exact"}],"termid":"GO:0045747"}


id: FYPO:0007087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation does not occur when cells are subject to sulfur starvation.","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished sporulation","termid":"FYPO:0000583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished sporulation during sulfur starvation","synonyms":[{"name":"abolished sporulation during cellular response to sulfur starvation","type":"exact"},{"name":"absent sporulation during sulfur starvation","type":"exact"},{"name":"ascospore formation abolished during sulfur starvation","type":"exact"},{"name":"sporulation abolished during sulfur starvation","type":"exact"}],"termid":"FYPO:0007087"}


id: FYPO:0002891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:mah","GO:0006325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin organization during vegetative growth","synonyms":[{"name":"normal chromatin organisation during vegetative growth","type":"exact"},{"name":"normal chromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002891"}


id: SO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding locus that originates from within the promoter region of a protein-coding gene, with transcription proceeding in the opposite direction on the other strand.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter_lncRNA_gene","synonyms":[{"name":"bidirectional promoter lncRNA","type":"exact"},{"name":"bidirectional promoter lncRNA gene","type":"exact"},{"name":"bidirectional_promoter_lncRNA_gene","type":"exact"}],"termid":"SO:0002185"}


id: GO:0050708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of protein secretion","termid":"GO:0050708"}


id: GO:1990138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["PMID:22790009","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection extension","synonyms":[{"name":"neurite extension","type":"narrow"},{"name":"neuron process extension","type":"exact"},{"name":"neuron protrusion extension","type":"exact"},{"name":"neuronal cell projection extension","type":"exact"}],"termid":"GO:1990138"}


id: PBO:0016548
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SLT2","termid":"PBO:0016548"}


id: SO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified asparagine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_asparagine","secondary_identifiers":["MOD:00903"],"synonyms":[{"name":"ModAsn","type":"exact"},{"name":"modified L asparagine","type":"exact"},{"name":"modified L-asparagine","type":"exact"}],"termid":"SO:0001388"}


id: FYPO:0000979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on miconazole","synonyms":[{"name":"normal cell population growth on miconazole","type":"exact"},{"name":"normal vegetative cell population growth on miconazole","type":"exact"}],"termid":"FYPO:0000979"}


id: FYPO:0005294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to hydroxyurea. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein binding during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein-protein interaction during cellular response to HU","type":"exact"},{"name":"decreased protein-protein interaction in response to hydroxyurea","type":"related"},{"name":"reduced protein-protein interaction during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005294"}


id: GO:0141190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that starts with an opsin molecule being activated by a photon. Opsins include rhodopsin and others visual receptors bind heterotrimeric transducin G proteins upon activation. Activated transducin alpha-subunit activates cGMP phosphodiesterase, which breaks down cGMP. The decrease in cGMP concentration leads to closure of cGMP-gated (CNG) channels, blockage of Na+ influx, and hyperpolarization of photoreceptor plasma membrane, leading to transmission of signal through synapses. The signal is terminated by phosphorylation of the C-terminal tail of rhodopsin by rhodopsin kinase to allow arrestin to bind and block G protein binding. Typical examples are rhabdomeric photoreceptors in the eyes of deuterostomes.","definition_xrefs":["PMID:19720651","PMID:36272560","PMID:36499010","PMID:37159291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-mediated opsin signaling pathway","termid":"GO:0141189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transducin-mediated opsin signaling pathway","synonyms":[{"name":"Gt-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated rhodopsin signaling pathway","type":"narrow"},{"name":"ciliary opsin-mediated signaling pathway","type":"exact"},{"name":"cyclic-GMP-mediated opsin signaling pathway","type":"exact"},{"name":"cyclic-nucleotide-mediated opsin signaling pathway","type":"exact"}],"termid":"GO:0141190"}


id: PBO:0028179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_splicing","termid":"PBO:0028179"}


id: PBO:0074187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 8","termid":"PBO:0074187"}


id: PR:Q09764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.11c","synonyms":[{"name":"Spom972h-SPAC24H6.11c","type":"exact"}],"termid":"PR:Q09764"}


id: GO:0034189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a very-low-density lipoprotein particle, a triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"very-low-density lipoprotein particle binding","synonyms":[{"name":"VLDL binding","type":"exact"},{"name":"very-low-density lipoprotein binding","type":"exact"}],"termid":"GO:0034189"}


id: GO:0031785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1A melatonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1A melatonin receptor binding","synonyms":[{"name":"type 1A melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031785"}


id: PBO:0089641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual-specifity cAMP/cGMP phosphodiesterase Cgs2","termid":"PBO:0089641"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: PBO:0068564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 15, pseudogene","termid":"PBO:0068564"}


id: PATO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mass density","synonyms":[{"name":"density","type":"related"}],"termid":"PATO:0001019"}


id: PBO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD binding oxidoreductase (predicted)","termid":"PBO:0000160"}


id: PBO:0052940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 24-1","termid":"PBO:0052940"}


id: PBO:0051161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-42 (pseudogene)","termid":"PBO:0051161"}


id: PBO:0057712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1298","termid":"PBO:0057712"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: PBO:0038789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 1","termid":"PBO:0038789"}


id: GO:1903894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22013210","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"regulation of IRE1 branch of UPR","type":"exact"},{"name":"regulation of IRE1 signal transduction pathway","type":"broad"},{"name":"regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903894"}


id: GO:0032937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP), SREBP-cleavage-activating protein (SCAP), and an Insig protein (Insig-1 or Insig-2) in the ER membrane.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0005783","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SREBP-SCAP-Insig complex","termid":"GO:0032937"}


id: GO:0071456
data:
  {"annotated_genes":["SJAG_00221","SJAG_04018","SJAG_00642","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97401,106050,107904,113158],"is_not":false,"summary":null,"term":"GO:0071456"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hypoxia","termid":"GO:0001666"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to hypoxic stress","type":"exact"},{"name":"cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:0071456","terms_by_termid":{"GO:0071456":null}}


id: PBO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_methyl_methanesulfonate","termid":"PBO:0031496"}


id: GO:0046029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-mannose + H+ + NADH.","definition_xrefs":["EC:1.1.1.255","RHEA:15029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mannitol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07135","MetaCyc:1.1.1.255-RXN"],"synonyms":[{"name":"MTD activity","type":"related"},{"name":"NAD-dependent mannitol dehydrogenase activity","type":"broad"},{"name":"mannitol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0046029"}


id: PATO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001166 urine enzyme composition (obsolete PATO:0001166)","termid":"PATO:0001166"}


id: GO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.","definition_xrefs":["GOC:add","PMID:12925704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane repair","termid":"GO:0001778"}


id: GO:0035610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutamate residue from the side chain of a protein. Glutamate side chains are added to glutamic acid residues within the primary protein sequence during polyglutamylation.","definition_xrefs":["GOC:sp","PMID:21074048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglutamylation","termid":"GO:0035608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein side chain deglutamylation","synonyms":[{"name":"removal of posttranslational polyglutamylation","type":"exact"},{"name":"shortening of glutamate side chain","type":"related"}],"termid":"GO:0035610"}


id: FYPO:0000919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal citrate (Si)-synthase activity","termid":"FYPO:0000917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased citrate (Si)-synthase activity","synonyms":[{"name":"increased citrate synthase activity","type":"broad"}],"termid":"FYPO:0000919"}


id: PBO:0110484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 pseudogene 2","termid":"PBO:0110484"}


id: PBO:0073355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family C member 1","termid":"PBO:0073355"}


id: FYPO:0000386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biofilm formation","termid":"FYPO:0000630"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished biofilm formation","synonyms":[{"name":"absent biofilm formation","type":"exact"},{"name":"biofilm formation abolished","type":"exact"},{"name":"biofilm formation: absent","type":"related"}],"termid":"FYPO:0000386"}


id: PBO:0076260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supervillin family member 2, pseudogene","termid":"PBO:0076260"}


id: PBO:0055208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2633","termid":"PBO:0055208"}


id: PBO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 3","termid":"PBO:0048803"}


id: GO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delta2-isopentenyl diphosphate + ADP = diphosphate + N6-(delta(2)-isopentenyl)adenosine 5'-diphosphate.","definition_xrefs":["MetaCyc:RXN-4305","EC:2.5.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP dimethylallyltransferase activity","secondary_identifiers":["EC:2.5.1.-","KEGG_REACTION:R08051"],"synonyms":[{"name":"2-isopentenyl-diphosphate:ADP 2-isopentenyltransferase activity","type":"exact"},{"name":"2-isopentenyl-diphosphate:ADP delta2-isopentenyltransferase activity","type":"exact"},{"name":"ADP isopentenyltransferase activity","type":"exact"},{"name":"dimethylallyl-diphosphate:ADP dimethylallyltransferase activity","type":"related"}],"termid":"GO:0052623"}


id: PBO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 1","termid":"PBO:0045089"}


id: PATO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000734 abdominal tone value (obsolete PATO:0000734)","termid":"PATO:0000734"}


id: PBO:0047531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 5","termid":"PBO:0047531"}


id: GO:0060097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly, arrangement, or disassembly of cytoskeletal structures that is involved in the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"cytoskeletal rearrangement involved in phagocytosis, engulfment","termid":"GO:0060097"}


id: GO:0017086
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that catalyzes the reaction 3-methyl-2-oxobutanoate + lipoamide = S-(2-methylpropanoyl)-dihydrolipoamide + carbon dioxide (CO2). This requires thiamine diphosphate; the enzyme also acts on (S)-3-methyl-2-oxopentanoate and 4-methyl-2-oxo-pentanoate.","definition_xrefs":["PMID:15612914"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) complex (obsolete GO:0017086)","synonyms":[{"name":"BCADH","type":"exact"},{"name":"branched-chain alpha-ketoacid dehydrogenase complex","type":"exact"}],"termid":"GO:0017086"}


id: PATO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the repetitiveness of bearer's rhythm.","definition_xrefs":["reference.com:reference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistence","termid":"PATO:0000082"}


id: PBO:0059973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 18","termid":"PBO:0059973"}


id: PBO:0052178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 9","termid":"PBO:0052178"}


id: GO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of pancreatic juice secretion","termid":"GO:0090186"},{"relation_name":"negatively_regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic juice secretion","termid":"GO:0090188"}


id: GO:0051631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of acetylcholine uptake","synonyms":[{"name":"regulation of acetylcholine import","type":"exact"}],"termid":"GO:0051631"}


id: PATO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electrical conductivity","termid":"PATO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve conductivity","termid":"PATO:0001758"}


id: PBO:0034485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_I","termid":"PBO:0034485"}


id: GO:0106246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.","definition_xrefs":["PMID:29932902","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exoribonuclease activity","termid":"GO:1901917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106246"}


id: PBO:0064393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase","termid":"PBO:0064393"}


id: PBO:0082033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18kDa catalytic subunit of the Signal Peptidase Complex (SPC); the Signal Peptidase Complex cleaves the signal sequence of proteins targeted to the endoplasmic reticulum; other members are Spc1p, Spc2p, Spc3p, and Sec11p","termid":"PBO:0082033"}


id: SO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A major type of spliceosomal intron spliced by the U2 spliceosome, that includes U1, U2, U4/U6 and U5 snRNAs.","definition_xrefs":["PMID:9428511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2_intron","synonyms":[{"name":"U2 intron","type":"exact"}],"termid":"SO:0000184"}


id: GO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. Outer dynein arms contain 2-3 heavy chains, two or more intermediate chains and a cluster of 4-8 light chains. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:6218174","PMID:2557057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"outer dynein arm","synonyms":[{"name":"outer dynein arm complex","type":"exact"}],"termid":"GO:0036157"}


id: PBO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 163 member A","termid":"PBO:0047116"}


id: GO:0140306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of recognizing mature outer membrane lipoproteins in the inner membrane and releasing from the inner membrane so that they can be transported across the periplasmic space to their target location, the outer membrane. This function exists in diderm bacteria, mediated by the LolCDE complex.","definition_xrefs":["PMID:10783239","PMID:21670534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140318","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lipoprotein releasing activity","termid":"GO:0140306"}


id: GO:0052557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont immune response (obsolete GO:0052557)","synonyms":[{"name":"positive regulation by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052557"}


id: PBO:0088779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery NADPH-dependent diflavin oxidoreductase Tah18","termid":"PBO:0088779"}


id: GO:0045513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-27.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 binding","termid":"GO:0019975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-27 binding","synonyms":[{"name":"IL-27 binding","type":"exact"}],"termid":"GO:0045513"}


id: GO:0043420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving anthranilate (2-aminobenzoate).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"anthranilate metabolic process","secondary_identifiers":["GO:0018869","UM-BBD_pathwayID:abz2"],"synonyms":[{"name":"2-aminobenzoate metabolic process","type":"exact"},{"name":"2-aminobenzoate metabolism","type":"exact"},{"name":"anthranilate metabolism","type":"exact"},{"name":"anthranilic acid metabolic process","type":"narrow"},{"name":"anthranilic acid metabolism","type":"narrow"},{"name":"ortho-aminobenzoic acid metabolic process","type":"narrow"},{"name":"ortho-aminobenzoic acid metabolism","type":"narrow"}],"termid":"GO:0043420"}


id: PBO:0051205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-31","termid":"PBO:0051205"}


id: PBO:0048268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 6","termid":"PBO:0048268"}


id: PBO:0035987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0035987"}


id: GO:0035692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds macrophage migration inhibitory factor. Comprises CD74 and CD44 cell surface proteins.","definition_xrefs":["GOC:BHF","PMID:17045821","PMID:12782713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"macrophage migration inhibitory factor receptor complex","termid":"GO:0035692"}


id: GO:0030628
data:
  {"annotated_genes":["SJAG_03995","SJAG_00225","SJAG_01200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97432,99404,105752],"is_not":false,"summary":null,"term":"GO:0030628"}]},"cv_name":"molecular_function","definition":"Binding to a pre-mRNA 3' splice site sequence.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA binding","termid":"GO:0036002"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00225":null,"SJAG_01200":null,"SJAG_03995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pre-mRNA 3'-splice site binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-mRNA 3' splice site binding","type":"exact"}],"termid":"GO:0030628","terms_by_termid":{"GO:0030628":null}}


id: PBO:0084223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP70 family ATP-binding protein; involved in protein folding, vacuolar import of proteins; required for ubiquitin-dependent degradation of short-lived proteins; associated with chaperonin-containing T-complex; 98% identical to paralog Ssa1p with distinct functional specificity in propagation of yeast [URE3] prions and vacuolar-mediated degradation of gluconeogenesis enzymes; binds tRNA, has role in tRNA nuclear import during starvation","termid":"PBO:0084223"}


id: PBO:0067816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 118","termid":"PBO:0067816"}


id: PBO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 27","termid":"PBO:0039507"}


id: PBHQ:001
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_qualifier_range","termid":"PBHQ:001"}


id: GO:2000122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of stomatal complex development","termid":"GO:2000038"},{"relation_name":"negatively_regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomatal complex development","termid":"GO:2000122"}


id: GO:0097721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Golgi-derived vesicle to which the ciliary basal body docks via its transitional fibers. Its membrane is compositionally distinct from Golgi membranes, and will become the ciliary membrane once the ciliary vesicle is fused to the plasma membrane. The ciliary vesicle is thought to be formed by multiple smaller vesicles that attach to the transitional fibers and then fuse to form a larger vesicle.","definition_xrefs":["PMID:25686250","GOC:cilia","PMID:13978319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"ciliary vesicle","synonyms":[{"name":"CV","type":"related"},{"name":"primary ciliary vesicle","type":"exact"}],"termid":"GO:0097721"}


id: FYPO:0000665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal peptidase activity","synonyms":[{"name":"normal protease activity","type":"exact"}],"termid":"FYPO:0000665"}


id: PBO:0087237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sequence-specific DNA binding protein; binds to a sequence motif associated with distinct genomic hotspots of non-H2B protein ubiquitylation (ub-hotspots); interacts with Slx5p to recruit the Slx5-Slx8  SUMO-targeted Ub ligase (STUbL) complex to ub-hotspots; deletion prevents ub-hotspot formation and exacerbates heat sensitivity of cells deficient in Rpd3L histone deacetylase complex members; forms nuclear foci upon DNA replication stress","termid":"PBO:0087237"}


id: PBO:0082148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-coenzymeA:ethanol O-acyltransferase; responsible for the major part of medium-chain fatty acid ethyl ester biosynthesis during fermentation; possesses short-chain esterase activity; may be involved in lipid metabolism and detoxification; EEB1 has a paralog, EHT1, that arose from the whole genome duplication","termid":"PBO:0082148"}


id: PBO:0110506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 4","termid":"PBO:0110506"}


id: PBO:0029887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_stress_granule_assembly","termid":"PBO:0029887"}


id: PBO:0089558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanosine 34-2'-O)-methyltransferase regulator Trm734","termid":"PBO:0089558"}


id: PBO:0047621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin, microtubule severing factor","termid":"PBO:0047621"}


id: PBO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly homolog COX15","termid":"PBO:0043765"}


id: MOD:00647
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to either N-acetyl-L-serine, O-acetyl-L-serine, or N,O-diacetyl-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"acetylated L-serine","synonyms":[{"name":"AcSer","type":"exact"}],"termid":"MOD:00647"}


id: PBO:0065245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 16","termid":"PBO:0065245"}


id: GO:0042957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of dextrin, any one, or the mixture, of the intermediate polysaccharides formed during the hydrolysis of starch, which are dextrorotatory, soluble in water, and precipitable in alcohol, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"dextrin transmembrane transporter activity","termid":"GO:0042957"}


id: PBO:0059234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L4","termid":"PBO:0059234"}


id: PBO:0026706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_proline_level","termid":"PBO:0026706"}


id: PATO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000776 memory value (obsolete PATO:0000776)","termid":"PATO:0000776"}


id: PBO:0082738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; DNA-binding protein involved in the synthesis of rRNA and in transcriptional repression and activation of genes regulated by the Target of Rapamycin (TOR) pathway","termid":"PBO:0082738"}


id: FYPO:0001969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on papulacandin B","termid":"FYPO:0001969"}


id: PR:Q10262
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug115 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 115 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.14c","synonyms":[{"name":"Spom972h-mug115","type":"exact"}],"termid":"PR:Q10262"}


id: GO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other organism by a type IV secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance secreted by type IV secretion system (obsolete GO:0052050)","termid":"GO:0052050"}


id: SO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in an insulator region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator_binding_site","synonyms":[{"name":"insulator binding site","type":"related"}],"termid":"SO:0001460"}


id: GO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell adhesion molecule ICAM-4.","definition_xrefs":["PMID:12477717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-ICAM-4 complex","synonyms":[{"name":"ITGAIIb-ITGB3-ICAM4 complex","type":"narrow"}],"termid":"GO:0071113"}


id: PBO:0058105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4320","termid":"PBO:0058105"}


id: GO:0044529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of mitochondrial rRNA molecules to degradation. Includes processes that both stabilize and destabilize mitochondrial rRNAs.","definition_xrefs":["GOC:jl","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of rRNA stability","termid":"GO:0044357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0010467","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial rRNA stability","termid":"GO:0044529"}


id: PBO:0004141
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nijmegen breakage syndrome","termid":"PBO:0004141"}


id: GO:0045578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of B cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"negatively_regulates","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell differentiation","synonyms":[{"name":"down regulation of B cell differentiation","type":"exact"},{"name":"down-regulation of B cell differentiation","type":"exact"},{"name":"downregulation of B cell differentiation","type":"exact"},{"name":"inhibition of B cell differentiation","type":"narrow"},{"name":"negative regulation of B cell development","type":"related"},{"name":"negative regulation of B lymphocyte differentiation","type":"exact"},{"name":"negative regulation of B-cell differentiation","type":"exact"},{"name":"negative regulation of B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045578"}


id: GO:0010270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the oxygen evolving complex (OEC) of photosystem II on a thylakoid membrane. The OEC protects the calcium-4 manganese-5 oxide cluster which is bound to the D1 and CP43 proteins. The exact protein composition of the OEC varies between cyanobacteria and plants, and in plants consists of three extrinsic nuclear-encoded polypeptides: PsbO, PsbP and PsbQ.","definition_xrefs":["PMID:16282331","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II assembly","termid":"GO:0010207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"photosystem II oxygen evolving complex assembly","synonyms":[{"name":"OEC (PSII) ASSEMBLY","type":"exact"}],"termid":"GO:0010270"}


