# terms

id: PATO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally posterior structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterioralized","termid":"PATO:0000630"}


id: PBO:0039781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 8","termid":"PBO:0039781"}


id: FYPO:0009107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which the microtubule-driven movement of daughter nuclei away from the cell tips after mitotic spindle dissambly occurs at a faster speed than normal during telophase.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased nuclear movement velocity during mitotic telophase","synonyms":[{"name":"increased nuclear displacement speed during telophase","type":"exact"},{"name":"increased nuclear displacement velocity during telophase","type":"exact"},{"name":"increased nuclear movement speed during telophase","type":"exact"}],"termid":"FYPO:0009107"}


id: GO:0060882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the breakdown of the basement membrane that contributes to the process of semicircular canal fusion.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane disassembly","termid":"GO:0034769"},{"relation_name":"part_of","term_name":"semicircular canal fusion","termid":"GO:0060879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane disassembly involved in semicircular canal fusion","synonyms":[{"name":"basal lamina disassembly involved in semicircular canal fusion","type":"related"}],"termid":"GO:0060882"}


id: GO:0005838
data:
  {"annotated_genes":["SJAG_04211","SJAG_02900","SJAG_01203","SJAG_03638","SJAG_04572","SJAG_04477","SJAG_01652","SJAG_04484","SJAG_02992","SJAG_00738","SJAG_01544","SJAG_03321","SJAG_04088","SJAG_03408","SJAG_00766","SJAG_00762","SJAG_01489","SJAG_04144","SJAG_01131","SJAG_00712"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106439,109235],"is_not":false,"summary":null,"term":"GO:0005838"},{"annotations":[100258,111365,95133,101515,103260,106440,109236,113577,92946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[94993,111335,97836,95134,107419,105508,98288,85092,90355,100532,111443,92595,93296],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes and unfolds ubiquitinated proteins, and translocates them to the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome regulatory particle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"19S regulatory particle","type":"narrow"},{"name":"PA700 proteasome activator","type":"narrow"},{"name":"PA700-dependent proteasome activator","type":"exact"},{"name":"modulator complex","type":"related"}],"termid":"GO:0005838","terms_by_termid":{"GO:0005838":null,"GO:0008540":null,"GO:0008541":null}}


id: PR:O14100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zds1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein zds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31F12.01","synonyms":[{"name":"Spom972h-zds1","type":"exact"},{"name":"meiotically up-regulated gene 88 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14100"}


id: GO:0016650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or similar compound, disulfide, NAD, NADP, oxygen or a flavin.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH group of donors, other acceptors (obsolete GO:0016650)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016650"}


id: GO:0050515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.148","RHEA:18437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity","secondary_identifiers":["KEGG_REACTION:R05634","MetaCyc:2.7.1.148-RXN","GO:0008698"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol kinase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol kinase activity","type":"exact"},{"name":"ATP:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol 2-phosphotransferase activity","type":"related"},{"name":"CDP-ME kinase activity","type":"related"},{"name":"CMK activity","type":"related"}],"termid":"GO:0050515"}


id: PBO:0029615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029615"}


id: PBO:0011514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0011514"}


id: GO:0043712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxyisocaproate + isocaproyl-CoA = (R)-2-hydroxyisocaproyl-CoA + isocaproate.","definition_xrefs":["PMID:16957230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"2-hydroxyisocaproate CoA-transferase activity","synonyms":[{"name":"(R)-2-hydroxyisocaproate CoA transferase activity","type":"exact"},{"name":"(R)-2-hydroxyisocaproate CoA-transferase activity","type":"exact"}],"termid":"GO:0043712"}


id: PBO:0056005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4","termid":"PBO:0056005"}


id: GO:0097175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,6-anhydro-N-acetylmuramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.","definition_xrefs":["GOC:yaf","PMID:15901686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolic process","termid":"GO:0097174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"1,6-anhydro-N-acetyl-beta-muramic acid catabolic process","synonyms":[{"name":"1,6-anhydro-N-acetyl-beta-muramate breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate catabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate degradation","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid degradation","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate catabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate degradation","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid catabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097175"}


id: GO:1901507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"negatively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of acylglycerol transport","synonyms":[{"name":"down regulation of acylglycerol transport","type":"exact"},{"name":"down regulation of glyceride transport","type":"exact"},{"name":"down-regulation of acylglycerol transport","type":"exact"},{"name":"down-regulation of glyceride transport","type":"exact"},{"name":"downregulation of acylglycerol transport","type":"exact"},{"name":"downregulation of glyceride transport","type":"exact"},{"name":"inhibition of acylglycerol transport","type":"narrow"},{"name":"inhibition of glyceride transport","type":"narrow"},{"name":"negative regulation of glyceride transport","type":"exact"}],"termid":"GO:1901507"}


id: PBO:0053433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 378","termid":"PBO:0053433"}


id: PBO:0082150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase; enzyme mainly responsible for the introduction of saturated very long chain fatty acids into neo-synthesized molecules of phosphatidylinositol; required for incorporation of stearic acid into phosphatidylinositol; affects chromosome stability when overexpressed; CST26 has a paralog, YDR018C, that arose from the whole genome duplication","termid":"PBO:0082150"}


id: FYPO:0001170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of methionine into the cell occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased methionine import","termid":"FYPO:0001558"},{"relation_name":"is_a","term_name":"abnormal amino acid import during nitrogen starvation","termid":"FYPO:0001648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased methionine import during nitrogen starvation","synonyms":[{"name":"decreased L-methionine import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"decreased L-methionine import during nitrogen starvation","type":"exact"},{"name":"decreased methionine import during nitrogen depletion","type":"exact"},{"name":"decreased methionine import during nitrogen deprivation","type":"exact"},{"name":"decreased methionine import into cell during nitrogen starvation","type":"exact"},{"name":"decreased methionine transport into cell during nitrogen starvation","type":"exact"},{"name":"decreased methionine uptake during nitrogen starvation","type":"exact"},{"name":"reduced methionine import during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001170"}


id: GO:0061203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the paramyosin-based thick filaments of myofibrils in striated muscle.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paramyosin filament assembly or disassembly","termid":"GO:0061204"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"striated muscle paramyosin thick filament assembly","termid":"GO:0061203"}


id: GO:0015903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fluconazole into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fluconazole is an antifungal drug used for oral candidiasis and cryptococcal meningitis; it is still under study for treatment of vaginal candidiasis and other fungal infections.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fluconazole transport","termid":"GO:0015903"}


id: PBO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A1","termid":"PBO:0047769"}


id: GO:1905562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","PMID:23201774","GOC:TermGenie","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"vascular endothelial cell proliferation","termid":"GO:0101023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial cell proliferation","termid":"GO:1905562"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: GO:0031337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur amino acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of sulfur amino acid metabolic process","synonyms":[{"name":"activation of sulfur amino acid metabolic process","type":"narrow"},{"name":"positive regulation of sulfur amino acid metabolism","type":"exact"},{"name":"stimulation of sulfur amino acid metabolic process","type":"narrow"},{"name":"up regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"up-regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"upregulation of sulfur amino acid metabolic process","type":"exact"}],"termid":"GO:0031337"}


id: PBO:0040910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 14","termid":"PBO:0040910"}


id: SO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene that arose via gene duplication. Generally duplicated pseudogenes have the same structure as the original gene, including intron-exon structure and some regulatory sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated_pseudogene","synonyms":[{"name":"duplicated pseudogene","type":"related"}],"termid":"SO:0001758"}


id: PBO:0041945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 5 pseudogene 1","termid":"PBO:0041945"}


id: GO:0031860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the single stranded telomeric 3' overhang, a conserved feature that ranges in length from 12 nt in budding yeast to approximately 500 nt in humans.","definition_xrefs":["PMID:16096639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"telomeric 3' overhang formation","synonyms":[{"name":"telomere 3'-end processing","type":"exact"},{"name":"telomere end processing","type":"related"}],"termid":"GO:0031860"}


id: PBO:0087626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; capable of binding Q/N rich proteins and mediating their folding","termid":"PBO:0087626"}


id: PBO:0075297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 2","termid":"PBO:0075297"}


id: GO:0045108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly or disassembly of intermediate filaments by the addition or removal of monomers from a filament; this usually occurs through the opposing action of kinases and phosphatases.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"}


id: PBO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 23","termid":"PBO:0072248"}


id: PBO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 60, pseudogene","termid":"PBO:0044399"}


id: PBO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 8","termid":"PBO:0042982"}


id: GO:0102516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-feruloyl-beta-D-glucose = delphinidin 3,7-di O-beta-D-glucoside + ferulate + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14448"],"termid":"GO:0102516"}


id: PBO:0060212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12B","termid":"PBO:0060212"}


id: PBO:0027843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_double-strand_break_site","termid":"PBO:0027843"}


id: GO:0051789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete response to protein (obsolete GO:0051789)","synonyms":[{"name":"response to protein","type":"exact"},{"name":"response to protein stimulus","type":"exact"}],"termid":"GO:0051789"}


id: FYPO:0001234
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115223,115305,115306,115330,115411,115632,115687,115688,115735,115736],"is_not":false,"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"viable vegetative cell population","termid":"FYPO:0002060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"slow vegetative cell population growth","references_by_uniquename":{"PMID:23090706":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00514","SJAG_03449","SJAG_03892","SJAG_00364","SJAG_05207","SJAG_02763","SJAG_01355","SJAG_00429","SJAG_01242"],"single_locus_genotype_uniquenames":["cmp7delta","scd1delta","vps32delta","vps4delta","man1delta","cox6delta","ned1delta","rad26delta","rad3delta"],"synonyms":[{"name":"decreased cell population proliferation","type":"related"},{"name":"decreased cell proliferation","type":"related"},{"name":"decreased vegetative cell population growth rate","type":"exact"},{"name":"growth defect, slow growth","type":"broad"},{"name":"increased doubling time","type":"related"},{"name":"reduced cell proliferation","type":"related"},{"name":"reduced vegetative cell population growth rate","type":"exact"}],"termid":"FYPO:0001234","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000103":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001234":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: FYPO:0001794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to purvalanol A","synonyms":[{"name":"normal RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"normal RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"normal transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001794"}


id: PBO:0036508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP II adaptor Erv29 (predicted)","termid":"PBO:0036508"}


id: GO:1905642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA methylation.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:PARL","GOC:TermGenie","PMID:27336847"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA methylation (obsolete GO:1905642)","synonyms":[{"name":"down regulation of DNA methylation","type":"exact"},{"name":"down-regulation of DNA methylation","type":"exact"},{"name":"downregulation of DNA methylation","type":"exact"},{"name":"inhibition of DNA methylation","type":"narrow"}],"termid":"GO:1905642"}


id: PBO:0075701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREK1IP1 pseudogene 1","termid":"PBO:0075701"}


id: PBO:0050783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2A","termid":"PBO:0050783"}


id: PBO:0052284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase insert domain receptor","termid":"PBO:0052284"}


id: PBO:0057666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1257","termid":"PBO:0057666"}


id: GO:1901995
data:
  {"annotated_genes":["SJAG_04332","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[91359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic cell cycle phase transition.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","PMID:22841721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle phase transition","termid":"GO:1901993"},{"relation_name":"positively_regulates","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle transition","type":"broad"},{"name":"activation of meiotic cell cycle phase transition","type":"narrow"},{"name":"positive regulation of cell cycle transition","type":"broad"},{"name":"up regulation of cell cycle transition","type":"broad"},{"name":"up regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"up-regulation of cell cycle transition","type":"broad"},{"name":"up-regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"upregulation of cell cycle transition","type":"broad"},{"name":"upregulation of meiotic cell cycle phase transition","type":"exact"}],"termid":"GO:1901995","terms_by_termid":{"GO:0110032":null,"GO:1905191":null}}


id: SO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase III.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_III_TATA_box","synonyms":[{"name":"RNA polymerase III TATA box","type":"exact"}],"termid":"SO:0001662"}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: PBO:0045279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 30","termid":"PBO:0045279"}


id: PBO:0045596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 7 (pseudogene)","termid":"PBO:0045596"}


id: GO:0021729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:curators","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior reticular formation development","termid":"GO:0021729"}


id: GO:0043628
data:
  {"annotated_genes":["SJAG_02621","SJAG_04942","SJAG_01867","SJAG_02622","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88065,89032,114254],"is_not":false,"summary":null,"term":"GO:0043628"},{"annotations":[114231,103975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[103977,114233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a regulatory non-coding RNA molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"},{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulatory ncRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ncRNA 3' end processing","type":"broad"},{"name":"ncRNA 3'-end processing","type":"broad"},{"name":"small regulatory ncRNA 3'-end processing","type":"narrow"}],"termid":"GO:0043628","terms_by_termid":{"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: GO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-lysine = L-glutamate + allysine.","definition_xrefs":["EC:2.6.1.36","RHEA:21200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-lysine 6-transaminase activity","secondary_identifiers":["MetaCyc:L-LYSINE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R00457"],"synonyms":[{"name":"L-lysine aminotransferase activity","type":"related"},{"name":"L-lysine transaminase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate 6-aminotransferase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"L-lysine:2-oxoglutarate 6-aminotransferase activity","type":"related"},{"name":"lysine 6-aminotransferase activity","type":"exact"},{"name":"lysine epsilon-aminotransferase activity","type":"related"},{"name":"lysine epsilon-transaminase activity","type":"related"},{"name":"lysine:2-ketoglutarate 6-aminotransferase activity","type":"related"}],"termid":"GO:0045484"}


id: PBO:0040650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 binding component 3","termid":"PBO:0040650"}


id: GO:0032532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the length of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus organization","termid":"GO:0032530"},{"relation_name":"is_a","term_name":"regulation of cell projection size","termid":"GO:0032536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microvillus length","termid":"GO:0032532"}


id: PR:Q9USL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup61 gene.","definition_xrefs":["UniProtKB:Q9USL4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.07c","synonyms":[{"name":"Spom972h-nup61","type":"exact"},{"name":"nuclear pore protein nup61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL4"}


id: GO:0046815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the viral genome is retained within the capsid during genome cleavage and packaging.","definition_xrefs":["PMID:9696839"],"gene_count":0,"genotype_count":0,"name":"obsolete genome retention in viral capsid (obsolete GO:0046815)","termid":"GO:0046815"}


id: PBO:0055627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3066","termid":"PBO:0055627"}


id: PBO:0075610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein like","termid":"PBO:0075610"}


id: PBO:0075401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17","termid":"PBO:0075401"}


id: PBO:0067574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 731, pseudogene","termid":"PBO:0067574"}


id: PBO:0070386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1","termid":"PBO:0070386"}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: PBO:0089406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S7","termid":"PBO:0089406"}


id: PBO:0109433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair protein","termid":"PBO:0109433"}


id: MOD:00872
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01970. Remap to MOD:01970.","definition_xrefs":["RESID:AA0202#var","Unimod:450","PubMed:15525938","PubMed:10747868","PubMed:1680872"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00872 L-isoglutamyl monoglutamic acid (obsolete MOD:00872)","synonyms":[{"name":"Glu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu","type":"exact"},{"name":"monoglutamyl","type":"related"}],"termid":"MOD:00872"}


id: GO:0010286
data:
  {"annotated_genes":["SJAG_04187","SJAG_03527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100502,100394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of an organism in response to high temperatures.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thermotolerance","type":"related"}],"termid":"GO:0010286","terms_by_termid":{"GO:0070370":null}}


id: GO:0140690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heteromultimeric complex capable of dihydropyrimidine dehydrogenase (NAD+); in E. coli, composed of PreA and PreT.","definition_xrefs":["PMID:21169495","PMID:34097066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NAD+) complex","secondary_identifiers":["MetaCyc:CPLX0-7788"],"termid":"GO:0140690"}


id: GO:0021710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar stellate cell. Differentiation includes the processes involved in commitment of a neuroblast to a cerebellar stellate cell fate. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","GOC:cls","GO_REF:0000021","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar molecular layer formation","termid":"GO:0021688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar stellate cell differentiation","termid":"GO:0021710"}


id: FYPO:0006341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis does not occur in the equatorial region of the cell during mitosis as in wild-type cells.","definition_xrefs":["PomBase:mah","PMID:16141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished equatorial endocytosis during mitosis","synonyms":[{"name":"abolished endocytosis to cell division site","type":"related"},{"name":"abolished equatorial endocytosis during M phase of mitotic cell cycle","type":"related"},{"name":"abolished equatorial endocytosis during cell division","type":"related"},{"name":"abolished equatorial endocytosis during mitosis during vegetative growth","type":"exact"},{"name":"abolished equatorial endocytosis during mitotic M phase","type":"related"},{"name":"endocytosis restricted to cell end during mitosis","type":"related"},{"name":"equatorial endocytosis abolished during mitosis","type":"exact"}],"termid":"FYPO:0006341"}


id: GO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-9 activity (obsolete GO:0004211)","synonyms":[{"name":"caspase-9 activity","type":"exact"}],"termid":"GO:0004211"}


id: GO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D2, (3S,5Z,7E,22E)-9,10-secoergosta-5,7,10(19),22-tetraen-3-ol.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin D2 metabolic process","synonyms":[{"name":"calciferol metabolic process","type":"exact"},{"name":"ergocalciferol metabolic process","type":"exact"},{"name":"vitamin D2 metabolism","type":"exact"}],"termid":"GO:0070639"}


id: FYPO:0003620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal pre-mRNA level","synonyms":[{"name":"normal pre-mRNA accumulation","type":"related"},{"name":"normal pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"normal pre-mRNA level during vegetative growth","type":"exact"},{"name":"normal pre-mRNA transcript level","type":"exact"}],"termid":"FYPO:0003620"}


id: PBO:0025551
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined malonic and methylmalonic aciduria","termid":"PBO:0025551"}


id: PBO:0058771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6895","termid":"PBO:0058771"}


id: PBO:0077558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 265","termid":"PBO:0077558"}


id: PR:O14158
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4A8.06c gene.","definition_xrefs":["UniProtKB:O14158","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AB hydrolase superfamily protein C4A8.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.06c","synonyms":[{"name":"Spom972h-SPAC4A8.06c","type":"exact"}],"termid":"PR:O14158"}


id: PBO:0083750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress","termid":"PBO:0083750"}


id: GO:0045124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone tissue loss (resorption).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone resorption","termid":"GO:0045124"}


id: GO:0015548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of organomercurial compounds from one side of a membrane to the other. Organomercurial substances are any organic compound containing a mercury atom.","definition_xrefs":["PMID:18793329","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercurial transmembrane transporter activity (obsolete GO:0015548)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"narrow"},{"name":"organomercurial transporter activity","type":"related"}],"termid":"GO:0015548"}


id: GO:0160157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-enzyme complex that catalyzes the oxidative decarboxylation of branched-chain alpha-ketoacids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. The complex comprises multiple copies of three enzymes referred to as E1, E2 and E3: branched-chain alpha-ketoacid dehydrogenase (E1, a heterotetramer of two alpha and two beta subunits), dihydrolipoyl transacylase (E2), and dihydrolipoamide dehydrogenase (E3). Additional proteins may also be present.","definition_xrefs":["PMID:10745006","PMID:3593587","PMID:10464218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoacid dehydrogenase complex","termid":"GO:0045240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"branched-chain alpha-ketoacid dehydrogenase complex","secondary_identifiers":["Wikipedia:Branched-chain_alpha-keto_acid_dehydrogenase_complex"],"synonyms":[{"name":"BCKD complex","type":"exact"},{"name":"BKDH complex","type":"exact"}],"termid":"GO:0160157"}


id: GO:0043424
data:
  {"annotated_genes":["SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67906],"is_not":false,"summary":null,"term":"GO:0043424"}]},"cv_name":"molecular_function","definition":"Binding to a protein histidine kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein histidine kinase binding","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"histidine kinase binding","type":"exact"},{"name":"histidine-protein kinase binding","type":"exact"},{"name":"protein-histidine kinase binding","type":"exact"}],"termid":"GO:0043424","terms_by_termid":{"GO:0043424":null}}


id: PBO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_asparagine","termid":"PBO:0031393"}


id: PBO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk3","termid":"PBO:0000665"}


id: PBO:0057109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199a-1","termid":"PBO:0057109"}


id: GO:1990364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldehyde.","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete response to aldehyde (obsolete GO:1990364)","synonyms":[{"name":"response to aldehyde","type":"exact"}],"termid":"GO:1990364"}


id: GO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete Rieske iron-sulfur protein (obsolete GO:0000047)","synonyms":[{"name":"Rieske iron-sulfur protein","type":"exact"},{"name":"Rieske iron-sulphur protein","type":"exact"}],"termid":"GO:0000047"}


id: PBO:0042384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD276 molecule","termid":"PBO:0042384"}


id: PBO:0062629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 6","termid":"PBO:0062629"}


id: GO:1900337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from carbon monoxide.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from carbon monoxide","termid":"GO:1900336"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from carbon monoxide","termid":"GO:2001134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from carbon monoxide","synonyms":[{"name":"down regulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"down-regulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"downregulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"inhibition of methane biosynthetic process from carbon monoxide","type":"narrow"}],"termid":"GO:1900337"}


id: PBO:0052840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-5, pseudogene","termid":"PBO:0052840"}


id: PBO:0089994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex peripheral subunit Cog6","termid":"PBO:0089994"}


id: PBO:0110190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein involved in heme biosynthesis, TMEM14 superfamily Aim19","termid":"PBO:0110190"}


id: PBO:0043541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin","termid":"PBO:0043541"}


id: PBO:0068157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 464","termid":"PBO:0068157"}


id: GO:0009231
data:
  {"annotated_genes":["SJAG_00376","SJAG_02491","SJAG_01054","SJAG_04711","SJAG_04845","SJAG_00491","SJAG_02360","SJAG_00480"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83723,97327,102967,103163,106574,110957,111902,113328],"is_not":false,"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"riboflavin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOSYN2-PWY","Wikipedia:Riboflavin"],"synonyms":[{"name":"riboflavin anabolism","type":"exact"},{"name":"riboflavin biosynthesis","type":"exact"},{"name":"riboflavin formation","type":"exact"},{"name":"riboflavin synthesis","type":"exact"},{"name":"vitamin B2 biosynthesis","type":"exact"},{"name":"vitamin B2 biosynthetic process","type":"exact"},{"name":"vitamin G biosynthesis","type":"exact"},{"name":"vitamin G biosynthetic process","type":"exact"}],"termid":"GO:0009231","terms_by_termid":{"GO:0009231":null}}


id: PBO:0057026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR124-2 host gene","termid":"PBO:0057026"}


id: PATO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000897 germ line dependent fertility value (obsolete PATO:0000897)","termid":"PATO:0000897"}


id: PBO:0063656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 13","termid":"PBO:0063656"}


id: GO:1902027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cartilage condensation.","definition_xrefs":["GOC:TermGenie","PMID:17202865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cartilage condensation","termid":"GO:1902026"},{"relation_name":"positively_regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cartilage condensation","synonyms":[{"name":"activation of cartilage condensation","type":"narrow"},{"name":"up regulation of cartilage condensation","type":"exact"},{"name":"up-regulation of cartilage condensation","type":"exact"},{"name":"upregulation of cartilage condensation","type":"exact"}],"termid":"GO:1902027"}


id: PBO:0045087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase","termid":"PBO:0045087"}


id: GO:0035078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by the steroid hormone 20-hydroxyecdysone (ecdysone) that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death by hormones","termid":"GO:0035081"},{"relation_name":"part_of","term_name":"response to ecdysone","termid":"GO:0035075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by ecdysone","termid":"GO:0035078"}


id: PBO:0027525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation","termid":"PBO:0027525"}


id: PBO:0071363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 22","termid":"PBO:0071363"}


id: PBO:0076675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1","termid":"PBO:0076675"}


id: PBO:0044613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 15","termid":"PBO:0044613"}


id: PBO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin-associated protein Pds5","termid":"PBO:0001234"}


id: GO:0097744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of urate salt or uric acid from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["PMID:25287933","Wikipedia:Renal_physiology#Secretion","PMID:3906799","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal urate salt excretion","synonyms":[{"name":"urate excretion","type":"broad"},{"name":"urate salt excretion","type":"broad"}],"termid":"GO:0097744"}


id: GO:0061397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to copper ion (obsolete GO:0061397)","termid":"GO:0061397"}


id: GO:0030516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, direction or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of extent of cell growth","termid":"GO:0061387"},{"relation_name":"regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension","termid":"GO:0030516"}


id: GO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete casein kinase I activity (obsolete GO:0004681)","synonyms":[{"name":"casein kinase I activity","type":"exact"}],"termid":"GO:0004681"}


id: GO:0032071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of deoxyribonuclease activity","termid":"GO:0032070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of endodeoxyribonuclease activity","synonyms":[{"name":"endodeoxyribonuclease regulator","type":"related"}],"termid":"GO:0032071"}


id: GO:2001006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellulose biosynthetic process","synonyms":[{"name":"regulation of cellulose anabolism","type":"exact"},{"name":"regulation of cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose formation","type":"exact"},{"name":"regulation of cellulose synthesis","type":"exact"}],"termid":"GO:2001006"}


id: PBO:0075529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E9","termid":"PBO:0075529"}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: GO:0008725
data:
  {"annotated_genes":["SJAG_01971","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73611,97762],"is_not":false,"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methyladenine + H2O = DNA with abasic site + 3-methyladenine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methyladenine and the deoxyribose sugar to remove the 3-methyladenine, leaving an abasic site.","definition_xrefs":["PMID:9224623","GOC:elh","PMID:10872450","EC:3.2.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798","GO:0140097"],"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.2.21-RXN","MetaCyc:RXN0-5189","EC:3.2.2.21"],"synonyms":[{"name":"3-methyladenine DNA glycosylase I","type":"related"},{"name":"DNA glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosylase I activity","type":"exact"},{"name":"alkylated-DNA glycohydrolase (releasing methyladenine and methylguanine)","type":"broad"},{"name":"deoxyribonucleate 3-methyladenine glycosidase I","type":"related"}],"termid":"GO:0008725","terms_by_termid":{"GO:0008725":null}}


id: PBO:0045229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C17","termid":"PBO:0045229"}


id: GO:0031313
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of an endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"extrinsic component of endosome membrane","synonyms":[{"name":"extrinsic to endosome membrane","type":"narrow"}],"termid":"GO:0031313"}


id: GO:0035239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.","definition_xrefs":["GOC:bf","PMID:14624839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube morphogenesis","termid":"GO:0035239"}


id: GO:0015765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of methylgalactoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Methylgalactoside is a compound in which the H of the OH group on carbon-1 of galactose is replaced by a methyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"methylgalactoside transport","termid":"GO:0015765"}


id: GO:0106088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell adhesion involved in sprouting angiogenesis.","definition_xrefs":["PMID:24177325","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell adhesion involved in sprouting angiogenesis","termid":"GO:0120078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106088"}


id: PBO:0063356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOTH pseudogene 1","termid":"PBO:0063356"}


id: GO:0003138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area which will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle.","definition_xrefs":["GOC:mtg_heart","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart field specification","termid":"GO:0003128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary heart field specification","synonyms":[{"name":"FHS specification","type":"exact"},{"name":"first heart field specification","type":"exact"}],"termid":"GO:0003138"}


id: PBO:0065079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase subunit 2","termid":"PBO:0065079"}


id: GO:0019896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in nerve cell axons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion transport along microtubule","termid":"GO:0047497"},{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"axonal transport of mitochondrion","synonyms":[{"name":"axon transport of mitochondria","type":"exact"}],"termid":"GO:0019896"}


id: PBO:0074900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box U73B","termid":"PBO:0074900"}


id: SO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the five prime region overlaps with another gene's 3' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_three_prime_overlap","synonyms":[{"name":"five prime-three prime overlap","type":"exact"}],"termid":"SO:0000073"}


id: GO:0102675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-ethylidenelophenol + a demethylated methyl acceptor = avenasterol + a methylated methyl acceptor.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete C4-methyltransferase activity (obsolete GO:0102675)","secondary_identifiers":["MetaCyc:RXN-4208"],"termid":"GO:0102675"}


id: PR:Q9Y7U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfk1 gene.","definition_xrefs":["UniProtKB:Q9Y7U1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.01","synonyms":[{"name":"Spom972h-sfk1","type":"exact"}],"termid":"PR:Q9Y7U1"}


id: GO:0009332
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of glutamate and tRNA(Glu) to form glutamyl-tRNA(Glu).","definition_xrefs":["PMID:29679766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"glutamate-tRNA ligase complex","termid":"GO:0009332"}


id: GO:0070026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric oxide (NO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nitric oxide binding","synonyms":[{"name":"NO binding","type":"exact"},{"name":"nitrogen monoxide binding","type":"exact"},{"name":"nitrosyl binding","type":"exact"}],"termid":"GO:0070026"}


id: GO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + FMNH(2) + O2 = acetaldehyde + FMN + H2O + H+ + nitrite.","definition_xrefs":["RHEA:26458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitronate monooxygenase (FMN-linked) activity","secondary_identifiers":["KEGG_REACTION:R00025"],"termid":"GO:0036434"}


id: PBO:0009180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sir antagonist","termid":"PBO:0009180"}


id: GO:1900640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of austinol biosynthetic process","synonyms":[{"name":"regulation of austinol anabolism","type":"exact"},{"name":"regulation of austinol biosynthesis","type":"exact"},{"name":"regulation of austinol formation","type":"exact"},{"name":"regulation of austinol synthesis","type":"exact"}],"termid":"GO:1900640"}


id: GO:2000186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"regulation of phosphate transmembrane transport","termid":"GO:2000185"},{"relation_name":"negatively_regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphate transmembrane transport","synonyms":[{"name":"negative regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000186"}


id: PATO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000679 temporal value (obsolete PATO:0000679)","termid":"PATO:0000679"}


id: PBO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript_level","termid":"PBO:0031214"}


id: GO:0008191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0030234","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"metalloendopeptidase inhibitor activity","synonyms":[{"name":"metalloprotease inhibitor","type":"narrow"},{"name":"metalloproteinase inhibitor","type":"narrow"}],"termid":"GO:0008191"}


id: GO:0044045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance in the symbiont cell outer membrane - a lipid bilayer that forms the outermost layer of the symbiont cell envelope. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance in symbiont cell outer membrane (obsolete GO:0044045)","termid":"GO:0044045"}


id: FYPO:0004620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spindle disassembly is abnormal. Spindle disassembly is the controlled breakdown of the spindle.","definition_xrefs":["PomBase:mah","GO:0051230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle disassembly","termid":"FYPO:0004620"}


id: PBO:0077411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 147","termid":"PBO:0077411"}


id: PATO:0000551
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000551 u v light sensitivity value (obsolete PATO:0000551)","termid":"PATO:0000551"}


id: GO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid whose main function is to synthesize and store starch.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast","secondary_identifiers":["Wikipedia:Amyloplast"],"termid":"GO:0009501"}


id: GO:0000814
data:
  {"annotated_genes":["SJAG_04936","SJAG_04912","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105989,106834,107651],"is_not":false,"summary":null,"term":"GO:0000814"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport and functions downstream of ESCRT I complex. It consists of the class E vacuolar protein sorting (Vps) proteins and is required for the membrane recruitment of ESCRT III complex and binds to ubiquitinated cargoes.","definition_xrefs":["PMID:12900393","GOC:rb","PMID:12892785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04024":null,"SJAG_04912":null,"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ESCRT II complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000814","terms_by_termid":{"GO:0000814":null}}


id: PBO:0088050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin ligase that modifies and regulates RNA Pol II; involved in a putative alcohol-responsive signaling pathway; accumulates in the nucleus under alcohol stress; has a role in organization of septins and the actin cytoskeleton; contains a Ring/PHD finger domain similar to the mammalian rA9 protein","termid":"PBO:0088050"}


id: FYPO:0007467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which trimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"},{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during G0","synonyms":[{"name":"increased histone H3 K9 methylation during G0","type":"exact"},{"name":"increased histone H3-K9 methylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 methylation during quiescence","type":"exact"},{"name":"increased histone H3K9me during G0","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during G0","type":"exact"}],"termid":"FYPO:0007467"}


id: PR:Q10353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein RLP24 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein rlp24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.13c","secondary_identifiers":["UniProtKB:Q10353"],"synonyms":[{"name":"Spom972h-RSL24D1","type":"exact"}],"termid":"PR:Q10353"}


id: GO:0120048
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91392],"is_not":false,"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine in U6 snRNA + S-adenosyl-L-methionine = H+ + N(6)-methyladenosine in U6 snRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:32266935","RHEA:52808","PMID:28525753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"U6 snRNA (adenine-(43)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.346","MetaCyc:RXN-18779"],"termid":"GO:0120048","terms_by_termid":{"GO:0120048":null}}


id: GO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"negative regulation of axonogenesis","termid":"GO:0050771"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting","synonyms":[{"name":"down regulation of collateral sprouting","type":"exact"},{"name":"down-regulation of collateral sprouting","type":"exact"},{"name":"downregulation of collateral sprouting","type":"exact"},{"name":"inhibition of collateral sprouting","type":"narrow"}],"termid":"GO:0048671"}


id: PBO:0051967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imatinib upregulated ABL suppressing lncRNA 1","termid":"PBO:0051967"}


id: GO:0033100
data:
  {"annotated_genes":["SJAG_00545","SJAG_02629","SJAG_01009","SJAG_00411","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90158,101487,102692,104112],"is_not":false,"summary":null,"term":"GO:0033100"},{"annotations":[86974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A Gcn5-independent multisubunit complex that catalyzes the acetylation of histone H3. The budding yeast complex includes Sas3p, Taf30p, and Yng1p.","definition_xrefs":["PMID:17157260","PMID:10817755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_02165":null,"SJAG_02629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"NuA3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033100","terms_by_termid":{"GO:0033100":null,"GO:1990467":null}}


id: PBO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.-.-","termid":"PBO:0005079"}


id: PBO:0059552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ser (AGU/C) 2","termid":"PBO:0059552"}


id: PBO:0086621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086621"}


id: PBO:0027250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dimethyl_sulfoxide","termid":"PBO:0027250"}


id: GO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the B-cell mediated immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont B-cell mediated immune response (obsolete GO:0052429)","synonyms":[{"name":"modulation by organism of symbiont B-cell mediated immune response","type":"exact"},{"name":"regulation by organism of symbiont B-cell mediated immune response","type":"exact"}],"termid":"GO:0052429"}


id: PBO:0089327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap95","termid":"PBO:0089327"}


id: PBO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein (predicted)","termid":"PBO:0004787"}


id: PBO:0090497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp6","termid":"PBO:0090497"}


id: PBO:0045320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain gamma, pseudogene","termid":"PBO:0045320"}


id: PATO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001037 absolute life span (obsolete PATO:0001037)","termid":"PATO:0001037"}


id: PBO:0111683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate kinase Hom3","termid":"PBO:0111683"}


id: FYPO:0001141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abolished transcriptional response to pheromone","synonyms":[{"name":"abolished regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"transcriptional response to pheromone abolished","type":"exact"}],"termid":"FYPO:0001141"}


id: PR:Q9Y7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-hydroxyacyl-CoA lyase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR18968:SF6","OMA:SCHPO02766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.04","secondary_identifiers":["UniProtKB:Q9Y7M1"],"synonyms":[{"name":"Spom972h-HACL1","type":"exact"}],"termid":"PR:Q9Y7M1"}


id: PBO:0050372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 75","termid":"PBO:0050372"}


id: PBO:0040360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit j","termid":"PBO:0040360"}


id: GO:0031641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a myelin sheath around nerve axons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"regulates","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myelination","termid":"GO:0031641"}


id: PBO:0054823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2236","termid":"PBO:0054823"}


id: PBO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member I, pseudogene","termid":"PBO:0047992"}


id: GO:0015574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of trehalose from one side of a membrane to the other. Trehalose is the disaccharide alpha-D-glucopyranosyl-alpha-D-glucopyranoside that acts of a reserve carbohydrate in certain fungi, algae and lichens.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"trehalose transmembrane transporter activity","secondary_identifiers":["RHEA:17629","GO:0015584"],"synonyms":[{"name":"trehalose permease activity","type":"exact"}],"termid":"GO:0015574"}


id: PBO:0045853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 43","termid":"PBO:0045853"}


id: GO:0141054
data:
  {"annotated_genes":["SJAG_03006","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114979,112396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2B substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0019787","GO:0003824","GO:0016746","GO:0004842"],"is_obsolete":false,"name":"histone H2B ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141054","terms_by_termid":{"GO:0140850":null}}


id: GO:1905744
data:
  {"annotated_genes":["SJAG_01040","SJAG_01511"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94766],"is_not":false,"summary":null,"term":"GO:1905744"},{"annotations":[114553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["GOC:TermGenie","PMID:2880558","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01040":null,"SJAG_01511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"regulation of nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"regulation of splicing","type":"broad"}],"termid":"GO:1905744","terms_by_termid":{"GO:1905744":null,"GO:1905746":null}}


id: PBO:0028591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_heat","termid":"PBO:0028591"}


id: PBO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by glucose","termid":"PBO:0005011"}


id: GO:0103088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-8-methylthiooctanoate + acetyl-CoA + H2O = H+ + 2-(6'-methylthio)hexylmalate + coenzyme A.","definition_xrefs":["EC:2.3.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"2-(6'-methylthio)hexylmalate synthase activity","secondary_identifiers":["MetaCyc:RXNQT-4172"],"termid":"GO:0103088"}


id: PBO:0046363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 1","termid":"PBO:0046363"}


id: GO:0033065
data:
  {"annotated_genes":["SJAG_02708","SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88874,93112],"is_not":false,"summary":null,"term":"GO:0033065"}]},"cv_name":"cellular_component","definition":"A DNA recombinase mediator complex that contains the Rad51 paralogs RAD51C and XRCC3, or orthologs thereof.","definition_xrefs":["PMID:17114795","GOC:mah","PMID:12427746","GOC:vw","PMID:16093548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_02708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Rad51C-XRCC3 complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033062"],"synonyms":[{"name":"CX3 complex","type":"exact"},{"name":"Rad55-Rad57 complex","type":"exact"},{"name":"Rhp55-Rhp57 complex","type":"related"}],"termid":"GO:0033065","terms_by_termid":{"GO:0033065":null}}


id: PBO:0073260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 4","termid":"PBO:0073260"}


id: GO:0033866
data:
  {"annotated_genes":["SJAG_04288","SJAG_01139","SJAG_03313","SJAG_00982","SJAG_00427","SJAG_04627","SJAG_03731","SJAG_05277","SJAG_01402","SJAG_02158","SJAG_03290","SJAG_02741","SJAG_03064","SJAG_00866","SJAG_02006","SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94575,89452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[114598,83676,91202,95217,104788,110423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[113219,85607,111019,88424,106800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[103662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_00866":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03731":null,"SJAG_04007":null,"SJAG_04288":null,"SJAG_04627":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside bisphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside bisphosphate anabolism","type":"exact"},{"name":"nucleoside bisphosphate biosynthesis","type":"exact"},{"name":"nucleoside bisphosphate formation","type":"exact"},{"name":"nucleoside bisphosphatehate synthesis","type":"exact"}],"termid":"GO:0033866","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0015937":null,"GO:0019427":null,"GO:0035338":null,"GO:1990181":null,"GO:2001295":null}}


id: PR:P0CT76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.13","synonyms":[{"name":"Spom972h-rps2302","type":"exact"}],"termid":"PR:P0CT76"}


id: GO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein polyubiquitination","synonyms":[{"name":"polyubiquitin","type":"related"},{"name":"protein polyubiquitinylation","type":"exact"},{"name":"protein polyubiquitylation","type":"exact"}],"termid":"GO:0000209"}


id: PBO:0027485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_decreased_numbers_during_G0","termid":"PBO:0027485"}


id: PR:O13898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ogm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.07c","synonyms":[{"name":"Spom972h-ogm1","type":"exact"}],"termid":"PR:O13898"}


id: GO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast proliferation","termid":"GO:0048145"}


id: PBO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 pseudogene 1","termid":"PBO:0043579"}


id: PBO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBA57 divergent transcript","termid":"PBO:0050841"}


id: PBO:0090882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Cbf5","termid":"PBO:0090882"}


id: GO:0070100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"negatively_regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"negative regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070100"}


id: GO:1901165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophoblast cell migration","synonyms":[{"name":"activation of trophoblast cell migration","type":"narrow"},{"name":"up regulation of trophoblast cell migration","type":"exact"},{"name":"up-regulation of trophoblast cell migration","type":"exact"},{"name":"upregulation of trophoblast cell migration","type":"exact"}],"termid":"GO:1901165"}


id: PBO:0063323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1","termid":"PBO:0063323"}


id: PR:O74335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga5 gene.","definition_xrefs":["UniProtKB:O74335","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.01c","synonyms":[{"name":"Spom972h-rga5","type":"exact"}],"termid":"PR:O74335"}


id: GO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824","GO:0009975"],"is_obsolete":false,"name":"guanylate cyclase activity","secondary_identifiers":["MetaCyc:GUANYLCYC-RXN","Reactome:R-HSA-74885","RHEA:13665","Reactome:R-HSA-392152"],"synonyms":[{"name":"GTP diphosphate-lyase (cyclizing) activity","type":"related"},{"name":"GTP diphosphate-lyase (cyclizing; 3',5'-cyclic-GMP-forming) activity","type":"related"},{"name":"guanyl cyclase activity","type":"related"},{"name":"guanylyl cyclase activity","type":"exact"},{"name":"receptor guanylate cyclase activity","type":"narrow"}],"termid":"GO:0004383"}


id: GO:0010621
data:
  {"annotated_genes":["SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97177],"is_not":false,"summary":null,"term":"GO:0010621"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467","GO:0051179"],"is_obsolete":false,"name":"negative regulation of transcription by transcription factor localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of transcription by transcription factor localisation","type":"exact"}],"termid":"GO:0010621","terms_by_termid":{"GO:0010621":null}}


id: GO:0003397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite of a neuron in the amphid sensory organ.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration involved in dendrite retrograde extension","termid":"GO:0003395"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003397"}


id: PBO:0056905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4GD divergent transcript","termid":"PBO:0056905"}


id: SO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000245 mRNA_by_polyadenylation_status (obsolete SO:0000245)","termid":"SO:0000245"}


id: GO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase kinase kinase (JNKKK) activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JNKKK activity (obsolete GO:0042655)","synonyms":[{"name":"activation of JUN kinase kinase kinase activity","type":"exact"},{"name":"positive regulation of JUNKKK activity","type":"broad"}],"termid":"GO:0042655"}


id: PBO:0084248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in GTP biosynthesis, expression is induced by mycophenolic acid resulting in resistance to the drug, expression is repressed by nutrient limitation; IMD2 has a paralog, YAR073W/YAR075W, that arose from a segmental duplication","termid":"PBO:0084248"}


id: PBO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_substance_in_growth_medium","termid":"PBO:0031044"}


id: PR:O13889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hri1 gene.","definition_xrefs":["UniProtKB:O13889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2-alpha kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.03c","synonyms":[{"name":"Spom972h-hri1","type":"exact"},{"name":"heme-regulated eukaryotic initiation factor eIF-2-alpha kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heme-regulated inhibitor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13889"}


id: PBO:0017905
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ask2 is the name which was given to the spurious orf on the opposite strand","termid":"PBO:0017905"}


id: PBO:0030357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stubby_cell_during_cellular_hyperosmotic_response","termid":"PBO:0030357"}


id: GO:0034015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ribulose 5-phosphate = L-xylulose 5-phosphate.","definition_xrefs":["RHEA:18497","EC:5.1.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-ribulose-5-phosphate 3-epimerase activity","secondary_identifiers":["MetaCyc:LXULRU5P-RXN"],"synonyms":[{"name":"L-xylulose 5-phosphate 3-epimerase activity","type":"related"},{"name":"SgaU","type":"related"},{"name":"UlaE","type":"related"}],"termid":"GO:0034015"}


id: GO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylene metabolic process","synonyms":[{"name":"xylene metabolism","type":"exact"}],"termid":"GO:0018948"}


id: GO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-K12 acetylation (obsolete GO:0043980)","synonyms":[{"name":"histone H2B acetylation at K12","type":"exact"}],"termid":"GO:0043980"}


id: PBO:0067149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 199, pseudogene","termid":"PBO:0067149"}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: PR:O74906
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC613.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box C/D snoRNA protein SPCC613.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.07","synonyms":[{"name":"Spom972h-SPCC613.07","type":"exact"}],"termid":"PR:O74906"}


id: PBO:0080330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 94 pseudogene","termid":"PBO:0080330"}


id: PBO:0027249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity","termid":"PBO:0027249"}


id: FYPO:0004387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:14766746","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"decreased activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"decreased positive regulation of DNA polymerase activity","type":"broad"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of DNA-directed DNA polymerase activity","type":"exact"}],"termid":"FYPO:0004387"}


id: PBO:0050280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMMR antisense RNA 1","termid":"PBO:0050280"}


id: PBO:0005789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide kinase Grc3 (predicted)","termid":"PBO:0005789"}


id: PBO:0086263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p; similar to human Ten1 which is critical for the telomeric function of the CST (Cdc13p-Stn1p-Ten1p) complex","termid":"PBO:0086263"}


id: PBO:0041489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 4","termid":"PBO:0041489"}


id: FYPO:0001982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"},{"relation_name":"is_a","term_name":"decreased rate of DNA replication","termid":"FYPO:0001981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased rate of DNA replication during vegetative growth","synonyms":[{"name":"decreased rate of DNA replication during mitotic cell cycle","type":"related"},{"name":"reduced rate of DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001982"}


id: PBO:0038502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 11","termid":"PBO:0038502"}


id: GO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface.","definition_xrefs":["ISBN:0879694971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated virion attachment to host cell","synonyms":[{"name":"virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:0046813"}


id: PBO:0084043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI lipid remodelase; responsible for introducing ceramides into GPI anchors having a C26:0 fatty acid in sn-2 of the glycerol moiety; can also use lyso-GPI protein anchors and various base resistant lipids as substrates; contains 14-16 transmembrane segments and several putative glycosylation and phosphorylation sites; null mutation is synthetically lethal with pkc1 deletion","termid":"PBO:0084043"}


id: PBO:0029087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029087"}


id: PBO:0051234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-33-1 (pseudogene)","termid":"PBO:0051234"}


id: PBO:0028460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_galactose-specific_flocculation","termid":"PBO:0028460"}


id: GO:1902649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:di","PMID:22199252"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A-H2B dimer displacement (obsolete GO:1902649)","termid":"GO:1902649"}


id: PBO:0004867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.16.6","termid":"PBO:0004867"}


id: GO:0102497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scyllo-inositol + NADP = 2,4,6/3,5-pentahydroxycyclohexanone + NADPH + H+.","definition_xrefs":["EC:1.1.1.371","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"scyllo-inositol dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:39063","MetaCyc:RXN-14347"],"termid":"GO:0102497"}


id: GO:0045494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.","definition_xrefs":["GOC:bf","GOC:rl","CL:0000210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell maintenance","termid":"GO:0045494"}


id: PBO:0056528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 5 receptor","termid":"PBO:0056528"}


id: PBO:0089544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WD repeat protein Swd3","termid":"PBO:0089544"}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:2719476","PMID:8423010","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: GO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage to separate a pre-LSU-rRNA from a pre-5S rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000458"}


id: GO:0102052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-proline + ATP(4-) = H+ + indole-3-acetyl-proline + AMP(2-) + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetyl-proline synthetase activity","secondary_identifiers":["MetaCyc:RXN-10434"],"termid":"GO:0102052"}


id: GO:0034650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cortisol, the steroid hormone 11-beta-17,21-trihydroxypregn-4-ene-3,20-dione. Cortisol is synthesized from cholesterol in the adrenal gland and controls carbohydrate, fat and protein metabolism and has anti-inflammatory properties.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cortisol metabolic process","synonyms":[{"name":"cortisol metabolism","type":"exact"}],"termid":"GO:0034650"}


id: PBO:0028342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array_morphology","termid":"PBO:0028342"}


id: PBO:0057477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 596","termid":"PBO:0057477"}


id: PR:P78860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.15c","secondary_identifiers":["UniProtKB:P78860"],"synonyms":[{"name":"21S rRNA (uridine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ2","type":"exact"}],"termid":"PR:P78860"}


id: PR:Q09676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase SPAC5H10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.03","synonyms":[{"name":"Spom972h-SPAC5H10.03","type":"exact"}],"termid":"PR:Q09676"}


id: _global:causal_relation_between_processes
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_processes","secondary_identifiers":["RO:0002501"],"termid":"_global:causal_relation_between_processes"}


id: PBO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 5","termid":"PBO:0061044"}


id: PBO:0051886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin alpha FG-GAP repeat containing 1","termid":"PBO:0051886"}


id: PBO:0085432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; localizes to the plasma membrane","termid":"PBO:0085432"}


id: GO:0031259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a uropod.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"cell trailing edge membrane","termid":"GO:0031257"},{"relation_name":"part_of","term_name":"uropod","termid":"GO:0001931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"uropod membrane","synonyms":[{"name":"uropodium membrane","type":"exact"}],"termid":"GO:0031259"}


id: PBO:0049803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 2","termid":"PBO:0049803"}


id: PBO:0056836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A","termid":"PBO:0056836"}


id: PBO:0080428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 12","termid":"PBO:0080428"}


id: PBO:0027697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_assembly_during_meiosis_II","termid":"PBO:0027697"}


id: PBO:0091492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog, kelch repeat, expressed during meiotic cell cycle, implicated in cytoskeletal processes","termid":"PBO:0091492"}


id: PBO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG15 ubiquitin like modifier","termid":"PBO:0051865"}


id: PBO:0079883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B","termid":"PBO:0079883"}


id: PBO:0064594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 1 homeobox 1","termid":"PBO:0064594"}


id: PR:O74973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4B4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.12c","synonyms":[{"name":"Spom972h-SPBC4B4.12c","type":"exact"}],"termid":"PR:O74973"}


id: PBO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Tos4 (predicted)","termid":"PBO:0001238"}


id: GO:0032939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to oxidative stress","synonyms":[{"name":"activation of translation in response to oxidative stress","type":"narrow"},{"name":"stimulation of translation in response to oxidative stress","type":"narrow"},{"name":"up regulation of translation in response to oxidative stress","type":"exact"},{"name":"up-regulation of translation in response to oxidative stress","type":"exact"},{"name":"upregulation of translation in response to oxidative stress","type":"exact"}],"termid":"GO:0032939"}


id: PR:O14255
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mannosyl-oligosaccharide glucosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01350","PANTHER:PTHR10412:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl-oligosaccharide glucosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.09","secondary_identifiers":["UniProtKB:O14255"],"synonyms":[{"name":"Spom972h-MOGS","type":"exact"},{"name":"processing A-glucosidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14255"}


id: SO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a lysine anticodon, and a 3' lysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"lysine_tRNA_primary_transcript","termid":"SO:0000222"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl_tRNA","synonyms":[{"name":"lysyl tRNA","type":"exact"},{"name":"lysyl-transfer RNA","type":"exact"},{"name":"lysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000265"}


id: GO:0045986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"negatively_regulates","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle contraction","synonyms":[{"name":"down regulation of smooth muscle contraction","type":"exact"},{"name":"down-regulation of smooth muscle contraction","type":"exact"},{"name":"downregulation of smooth muscle contraction","type":"exact"},{"name":"inhibition of smooth muscle contraction","type":"narrow"},{"name":"smooth muscle relaxation","type":"related"}],"termid":"GO:0045986"}


id: PBO:0063114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1 pseudogene 1","termid":"PBO:0063114"}


id: PBO:0067850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 152","termid":"PBO:0067850"}


id: PBO:0073564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing transforming protein D","termid":"PBO:0073564"}


id: GO:1905359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:26696398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to meiotic spindle","synonyms":[{"name":"protein localisation to meiotic spindle","type":"exact"}],"termid":"GO:1905359"}


id: PBO:0028346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028346"}


id: GO:0016109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetraterpenoid biosynthetic process","synonyms":[{"name":"tetraterpene biosynthesis","type":"narrow"},{"name":"tetraterpene biosynthetic process","type":"narrow"},{"name":"tetraterpenoid anabolism","type":"exact"},{"name":"tetraterpenoid biosynthesis","type":"exact"},{"name":"tetraterpenoid formation","type":"exact"},{"name":"tetraterpenoid synthesis","type":"exact"}],"termid":"GO:0016109"}


id: PATO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality of a process","termid":"PATO:0002062"}


id: PBO:0028685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_spindle_pole_body_separation","termid":"PBO:0028685"}


id: FYPO:0002722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"phytochelatin absent from cell","synonyms":[{"name":"cadystin absent from cell","type":"exact"},{"name":"phytochelatin absent from cell during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002722"}


id: GO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.","definition_xrefs":["PMID:19427217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"HAUS complex","synonyms":[{"name":"HAUS augmin complex","type":"exact"}],"termid":"GO:0070652"}


id: GO:0010674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","PMID:8618927"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010674)","synonyms":[{"name":"activation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"},{"name":"positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of meiosis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0010674"}


id: SO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified guanine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanine","termid":"SO:0001964"}


id: GO:1905893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["GOC:bc","GOC:TermGenie","PMID:21803450","GO_REF:0000058","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular response to thapsigargin (obsolete GO:1905893)","synonyms":[{"name":"activation of cellular response to thapsigargin","type":"narrow"},{"name":"up regulation of cellular response to thapsigargin","type":"exact"},{"name":"up-regulation of cellular response to thapsigargin","type":"exact"},{"name":"upregulation of cellular response to thapsigargin","type":"exact"}],"termid":"GO:1905893"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["UniProtKB:G2TRP1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: PBO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 8","termid":"PBO:0048239"}


id: GO:0018500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-9R,10R-dihydrodiolphenanthrene + NAD+ = NADH + H+ + 9,10-dihydroxyphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"trans-9R,10R-dihydrodiolphenanthrene dehydrogenase activity","termid":"GO:0018500"}


id: PBO:0056846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-6-methylguanine-DNA methyltransferase","termid":"PBO:0056846"}


id: PBO:0038767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 5","termid":"PBO:0038767"}


id: PBO:0034158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_ending_of","termid":"PBO:0034158"}


id: PBO:0063369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 9","termid":"PBO:0063369"}


id: FYPO:0007325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a transfer RNA (tRNA) is increased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-RNA interaction","termid":"FYPO:0002135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased tRNA binding","synonyms":[{"name":"increased protein-tRNA interaction","type":"exact"},{"name":"increased protein-transfer RNA interaction","type":"exact"},{"name":"increased transfer RNA binding","type":"exact"}],"termid":"FYPO:0007325"}


id: GO:0004251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.","definition_xrefs":["EC:3.4.13.9"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidase activity (obsolete GO:0004251)","secondary_identifiers":["MetaCyc:3.4.13.9-RXN"],"synonyms":[{"name":"X-Pro dipeptidase activity","type":"exact"},{"name":"Xaa-Pro dipeptidase activity","type":"exact"},{"name":"gamma-peptidase activity","type":"related"},{"name":"imidodipeptidase activity","type":"related"},{"name":"peptidase D","type":"related"},{"name":"prolidase activity","type":"related"},{"name":"proline dipeptidase activity","type":"related"}],"termid":"GO:0004251"}


id: GO:0140415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host defenses","termid":"GO:0052200"},{"relation_name":"is_a","term_name":"effector-mediated modulation of host process by symbiont","termid":"GO:0140418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated modulation of host defenses by symbiont","termid":"GO:0140415"}


id: GO:2000568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of memory T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of memory T cell activation","termid":"GO:2000567"},{"relation_name":"positively_regulates","term_name":"memory T cell activation","termid":"GO:0035709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of memory T cell activation","termid":"GO:2000568"}


id: PBO:0085673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in phospholipid flippase function; null allele suppresses growth and membrane trafficking defects associated with all flippase null alleles; proposed function as a phospholipid scramblase that reduces membrane asymmetry; PQ loop family member; localizes to the endosome and trans-Golgi network; non-essential gene","termid":"PBO:0085673"}


id: GO:0097347
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterooligomeric protein complex that spans the bacterial periplasm and enables the secretion of adhesin proteins in Gram-negative bacteria. In Citrobacter rodentium, Salmonella enterica and Escherichia coli, the TAM complex consists of an Omp85-family protein, TamA, in the outer membrane and TamB in the inner membrane.","definition_xrefs":["PMID:22466966","GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TAM protein secretion complex","synonyms":[{"name":"translocation and assembly module protein complex","type":"exact"}],"termid":"GO:0097347"}


id: PR:Q9Y818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 G1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03741","PANTHER:PTHR24067:SF36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.09","secondary_identifiers":["UniProtKB:Q9Y818"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2G1","type":"exact"},{"name":"ubiquitin carrier protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y818"}


id: GO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"salicylic acid catabolic process","synonyms":[{"name":"salicylic acid breakdown","type":"exact"},{"name":"salicylic acid catabolism","type":"exact"},{"name":"salicylic acid degradation","type":"exact"}],"termid":"GO:0046244"}


id: PBO:0005149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3 phosphoglycerate dehydrogenase (predicted)","termid":"PBO:0005149"}


id: PBO:0088861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, protein kinase inhibitor Nif1","termid":"PBO:0088861"}


id: PR:Q9UTB2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dia4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.06c","synonyms":[{"name":"SerRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dia4","type":"exact"},{"name":"seryl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"seryl-tRNA(Ser/Sec) synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTB2"}


id: GO:0010866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of triglyceride biosynthetic process","synonyms":[{"name":"regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010866"}


id: PR:Q9UUI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glioma tumor suppressor candidate region gene 2 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01992","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.09","secondary_identifiers":["UniProtKB:Q9UUI4"],"synonyms":[{"name":"Spom972h-GLTSCR2","type":"exact"}],"termid":"PR:Q9UUI4"}


id: SO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_methyladenosine","secondary_identifiers":["RNAMOD:005"],"synonyms":[{"name":"2-methylthio-N6-methyladenosine","type":"exact"},{"name":"ms2m6A","type":"exact"},{"name":"two methylthio N6 methyladenosine","type":"exact"}],"termid":"SO:0001299"}


id: PBO:0064283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing N1","termid":"PBO:0064283"}


id: GO:0009290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of DNA into a cell that contributes to the process of transformation, the uptake of foreign genetic material into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transport","termid":"GO:0051027"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"part_of","term_name":"DNA-mediated transformation","termid":"GO:0009294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"DNA import into cell involved in transformation","synonyms":[{"name":"DNA import into cell","type":"broad"},{"name":"DNA transport into cell during transformation","type":"related"},{"name":"cellular DNA import during transformation","type":"related"},{"name":"cellular DNA uptake","type":"broad"}],"termid":"GO:0009290"}


id: PBO:0066248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 1","termid":"PBO:0066248"}


id: GO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C2 complex (obsolete GO:0005603)","synonyms":[{"name":"complement component C2 complex","type":"exact"}],"termid":"GO:0005603"}


id: GO:0032746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-22 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-22 production","termid":"GO:0032666"},{"relation_name":"positively_regulates","term_name":"interleukin-22 production","termid":"GO:0032626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-22 production","secondary_identifiers":["GO:0045395"],"synonyms":[{"name":"activation of interleukin-22 production","type":"narrow"},{"name":"positive regulation of IL-22 production","type":"exact"},{"name":"positive regulation of interleukin-22 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-22 production","type":"narrow"},{"name":"up regulation of interleukin-22 production","type":"exact"},{"name":"up-regulation of interleukin-22 production","type":"exact"},{"name":"upregulation of interleukin-22 production","type":"exact"}],"termid":"GO:0032746"}


id: GO:0048442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sepal over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"flower calyx development","termid":"GO:0048464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal development","secondary_identifiers":["GO:0048421"],"termid":"GO:0048442"}


id: GO:0140338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a sphingomyelin from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"},{"relation_name":"is_a","term_name":"sphingolipid transfer activity","termid":"GO:0120016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"sphingomyelin transfer activity","secondary_identifiers":["GO:0010175"],"synonyms":[{"name":"sphingomyelin carrier activity","type":"exact"},{"name":"sphingosine transmembrane transporter activity","type":"broad"}],"termid":"GO:0140338"}


id: PBO:0089106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1","termid":"PBO:0089106"}


id: GO:0052338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The perturbation by an organism of the symbiont cell wall, leading to damage or temporary subversion of the cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by host of symbiont cell wall (obsolete GO:0052338)","synonyms":[{"name":"catabolism of symbiont cell wall by organism","type":"exact"},{"name":"degradation of symbiont cell wall by organism","type":"exact"},{"name":"disassembly by host of symbiont cell wall","type":"exact"},{"name":"disruption by host of symbiont cell wall","type":"related"}],"termid":"GO:0052338"}


id: PBO:0065076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 3","termid":"PBO:0065076"}


id: GO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of B cell anergy","termid":"GO:0002672"},{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell anergy","termid":"GO:0002917"},{"relation_name":"positively_regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral B cell anergy","synonyms":[{"name":"activation of peripheral B cell anergy","type":"narrow"},{"name":"stimulation of peripheral B cell anergy","type":"narrow"},{"name":"up regulation of peripheral B cell anergy","type":"exact"},{"name":"up-regulation of peripheral B cell anergy","type":"exact"},{"name":"upregulation of peripheral B cell anergy","type":"exact"}],"termid":"GO:0002919"}


id: PBO:0073557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 1 pseudogene 1","termid":"PBO:0073557"}


id: PBO:0061398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide B","termid":"PBO:0061398"}


id: GO:1990973
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A linear array of nuclear envelope membrane proteins composed of nesprin-2G and SUN2, which couple the nucleus to moving actin cables, resulting in rearward nuclear transport (away from the leading edge).","definition_xrefs":["PMID:21173262","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"transmembrane actin-associated (TAN) line","synonyms":[{"name":"TAN line","type":"related"}],"termid":"GO:1990973"}


id: PR:P40901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asc-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative amino-acid permease isp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.09","secondary_identifiers":["UniProtKB:P40901"],"synonyms":[{"name":"Spom972h-SLC7A10","type":"exact"}],"termid":"PR:P40901"}


id: GO:0120077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The connection of an angiogenic sprout to another vessel or sprout during the formation of vascular networks by sprouting angiogenesis.","definition_xrefs":["PMID:28264837","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenic sprout fusion","synonyms":[{"name":"blood vessel anastomosis","type":"exact"}],"termid":"GO:0120077"}


id: PBO:0068217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 524","termid":"PBO:0068217"}


id: FYPO:0007919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which alternative polyadenylation of RNA is abnormal. RNA alternative polyadenylation generates RNA molecules with variable 3'-end lengths from a given RNA by differential use of cleavage and polyadenylation signals. Includes differences in the relative usage levels of alternative polyadenylation sites.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"abnormal RNA alternative polyadenylation","termid":"FYPO:0007919"}


id: GO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled purinergic nucleotide receptor activity","termid":"GO:0045028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cAMP receptor activity","secondary_identifiers":["GO:0001644"],"synonyms":[{"name":"3',5' cAMP receptor activity","type":"exact"},{"name":"3',5'-cAMP receptor activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate receptor activity","type":"exact"},{"name":"class E G protein coupled receptor","type":"broad"},{"name":"class E G-protein coupled receptor","type":"broad"},{"name":"class E GPCR","type":"broad"},{"name":"cyclic AMP receptor activity","type":"exact"}],"termid":"GO:0001646"}


id: GO:0075030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"modulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"modulation of symbiont germ tube hook structure formation on or near host","type":"related"},{"name":"regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"}],"termid":"GO:0075030"}


id: PBO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas ligand","termid":"PBO:0047309"}


id: PBO:0043190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN1A interacting zinc finger protein 1","termid":"PBO:0043190"}


id: GO:0016231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-beta-D-glucosaminides.","definition_xrefs":["EC:3.2.1.52","MetaCyc:3.2.1.52-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"beta-N-acetylglucosaminidase activity","termid":"GO:0016231"}


id: GO:0031415
data:
  {"annotated_genes":["SJAG_02920","SJAG_02726","SJAG_04631","SJAG_04179"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85625,106615,112970,114131],"is_not":false,"summary":null,"term":"GO:0031415"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to an N-terminal Ser, Ala, Gly, or Thr residue of a protein acceptor molecule. In Saccharomyces the complex includes Nat1p and Ard1p, and may contain additional proteins.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02726":null,"SJAG_02920":null,"SJAG_04179":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"NatA complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-terminal acetyltransferase A complex","type":"exact"}],"termid":"GO:0031415","terms_by_termid":{"GO:0031415":null}}


id: GO:0004831
data:
  {"annotated_genes":["SJAG_04473","SJAG_00243"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111219,113555],"is_not":false,"summary":null,"term":"GO:0004831"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:6.1.1.1","RHEA:10220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00243":null,"SJAG_04473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140098","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"tyrosine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02918","Reactome:R-HSA-379980","MetaCyc:TYROSINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380170"],"synonyms":[{"name":"L-tyrosine-tRNA(Tyr) ligase (AMP-forming) activity","type":"related"},{"name":"L-tyrosine-tRNATyr ligase (AMP-forming)","type":"related"},{"name":"L-tyrosine:tRNATyr ligase (AMP-forming)","type":"related"},{"name":"tyrosine tRNA synthetase activity","type":"related"},{"name":"tyrosine translase activity","type":"related"},{"name":"tyrosine-transfer RNA ligase activity","type":"related"},{"name":"tyrosine-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-tRNA ligase activity","type":"related"},{"name":"tyrosyl-tRNA synthetase activity","type":"exact"},{"name":"tyrosyl-transfer RNA synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004831","terms_by_termid":{"GO:0004831":null}}


id: PATO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorsal structures.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsalized","termid":"PATO:0000620"}


id: GO:0060720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of spongiotrophoblast cells, resulting in the expansion of the population in the spongiotrophoblast layer.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer developmental growth","termid":"GO:0090214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast cell proliferation","termid":"GO:0060720"}


id: GO:0010691
data:
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id: GO:0098687
data:
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id: PBO:0016922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug165","termid":"PBO:0016922"}


id: GO:0035373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chondroitin sulfate proteoglycan, any proteoglycan containing chondroitin sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan binding","termid":"GO:0035373"}


id: GO:1900867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sarcinapterin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"methanopterin-containing compound metabolic process","termid":"GO:2001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sarcinapterin metabolic process","synonyms":[{"name":"sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900867"}


id: PR:O60063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nam9 gene.","definition_xrefs":["UniProtKB:O60063","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S4-like, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.01c","synonyms":[{"name":"Spom972h-nam9","type":"exact"}],"termid":"PR:O60063"}


id: FYPO:0000875
data:
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id: SO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant present in the embryo that is carried by every cell in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germline_variant","synonyms":[{"name":"germline variant","type":"exact"}],"termid":"SO:0001778"}


id: PBO:0027691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_during_vegetative_growth","termid":"PBO:0027691"}


id: PBO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_zinc_level","termid":"PBO:0030116"}


id: FYPO:0001540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of manganese ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular manganese level","synonyms":[{"name":"normal cellular manganese accumulation","type":"related"},{"name":"normal cellular manganese ion level","type":"exact"},{"name":"normal cellular manganese level during mitotic cell cycle","type":"related"},{"name":"normal cellular manganese level during vegetative growth","type":"exact"}],"termid":"FYPO:0001540"}


id: PBO:0056732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 1","termid":"PBO:0056732"}


id: GO:0061624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructose that results in the formation of dihydroxyacetone phosphate and glyceraldehyde-3-phosphate.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate","termid":"GO:0061624"}


id: GO:0005278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + acetylcholine(in) = H+(in) + acetylcholine(out).","definition_xrefs":["TC:2.A.1.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transmembrane transporter activity","termid":"GO:0005277"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"acetylcholine:proton antiporter activity","synonyms":[{"name":"acetylcholine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0005278"}


id: PBO:0076572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 1","termid":"PBO:0076572"}


id: FYECO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature (below 25 degrees Celsius) followed by growth at standard temperature (in the range around 25-32 degrees Celsius).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, low to standard","synonyms":[{"name":"growth at low temperature followed by growth at standard temperature","type":"related"}],"termid":"FYECO:0000232"}


id: PBO:0073321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 4","termid":"PBO:0073321"}


id: PBO:0076108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 16","termid":"PBO:0076108"}


id: PATO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001085 absolute acceleration value (obsolete PATO:0001085)","termid":"PATO:0001085"}


id: PBO:0090712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase SIN pathway Cdc7","termid":"PBO:0090712"}


id: PBO:0056500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 4","termid":"PBO:0056500"}


id: GO:0043793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + 5-phospho-alpha-D-ribose 1-diphosphate = 4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + CO2 + diphosphate.","definition_xrefs":["GOC:jl","PMID:12142414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"beta-ribofuranosylaminobenzene 5'-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-8124"],"synonyms":[{"name":"beta-RFAP synthase activity","type":"exact"}],"termid":"GO:0043793"}


id: PBO:0045291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 43","termid":"PBO:0045291"}


id: GO:0098714
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97839],"is_not":false,"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"The directed movement of malate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transport","termid":"GO:0071423"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"malate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097405"],"synonyms":[{"name":"malate import into cell","type":"exact"}],"termid":"GO:0098714","terms_by_termid":{"GO:0098714":null}}


id: PBO:0082056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease","termid":"PBO:0082056"}


id: GO:2000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"regulates","term_name":"endothelial microparticle formation","termid":"GO:0072565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial microparticle formation","synonyms":[{"name":"regulation of endothelial microparticle generation","type":"exact"},{"name":"regulation of endothelial microparticle release","type":"exact"}],"termid":"GO:2000335"}


id: PBO:0078680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 13-1","termid":"PBO:0078680"}


id: PBO:0083928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Functional ortholog of human PIG-V; PIG-V is a mannosyltransferase that transfers the second mannose in glycosylphosphatidylinositol biosynthesis; the authentic, non-tagged protein was localized to mitochondria","termid":"PBO:0083928"}


id: GO:0039613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of phosphorylation of viral or host proteins in a host.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein phosphorylation (obsolete GO:0039613)","synonyms":[{"name":"viral inhibition of host protein phosphorylation","type":"exact"}],"termid":"GO:0039613"}


id: PBO:0076252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2A","termid":"PBO:0076252"}


id: PBO:0083298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of essential PRP21 gene encoding a subunit of the SF3a splicing factor complex","termid":"PBO:0083298"}


id: GO:1904325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GO_REF:0000058","PMID:15937517","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"positively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"activation of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"positive regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"upregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904325"}


id: PBO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic nuclear protein implicated in meiotic chromosome segregation","termid":"PBO:0004924"}


id: GO:0034440
data:
  {"annotated_genes":["SJAG_02788","SJAG_00706","SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[88404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"}]},"cv_name":"biological_process","definition":"The removal of one or more electrons from a lipid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00706":null,"SJAG_02788":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid oxidation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034440","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0019395":null}}


id: PBO:0045453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAQ-box RNA dependent ATPase 1","termid":"PBO:0045453"}


id: GO:0099167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099167)","termid":"GO:0099167"}


id: PR:Q8TFG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB15E9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.02c","synonyms":[{"name":"Spom972h-SPAPB15E9.02c","type":"exact"}],"termid":"PR:Q8TFG8"}


id: GO:0034245
data:
  {"annotated_genes":["SJAG_03014","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83662,91333],"is_not":false,"summary":null,"term":"GO:0034245"}]},"cv_name":"cellular_component","definition":"A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form.","definition_xrefs":["GOC:krc","PMID:7929382","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03014":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"mitochondrial DNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial RNA polymerase complex","type":"broad"},{"name":"mitochondrial RNA polymerase holoenzyme complex","type":"exact"}],"termid":"GO:0034245","terms_by_termid":{"GO:0034245":null}}


id: PBO:0042241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 4","termid":"PBO:0042241"}


id: GO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricoumaroyl spermidine + NADPH + O2 = dicoumaroyl monocaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tricoumaroylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11260"],"synonyms":[{"name":"tricoumaroyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072547"}


id: PBO:0048684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 3","termid":"PBO:0048684"}


id: PBO:0055589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3025","termid":"PBO:0055589"}


id: FYPO:0002733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated tapered cell","type":"exact"}],"termid":"FYPO:0002733"}


id: GO:0044166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum lumen","synonyms":[{"name":"host endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0044166"}


id: PR:Q9Y7Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop16 gene.","definition_xrefs":["UniProtKB:Q9Y7Z1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.10","synonyms":[{"name":"Spom972h-nop16","type":"exact"}],"termid":"PR:Q9Y7Z1"}


id: PBO:0062472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 163 pseudogene","termid":"PBO:0062472"}


id: GO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone, a peptide hormone that is secreted by the anterior pituitary or the placenta into the circulation, and binds to membrane receptors in target tissues to stimulate body growth.","definition_xrefs":["PMID:11445442","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005488","GO:0098772","GO:0140677","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"growth hormone activity","synonyms":[{"name":"GH activity","type":"exact"},{"name":"pituitary growth hormone activity","type":"narrow"},{"name":"placental growth hormone activity","type":"narrow"}],"termid":"GO:0070186"}


id: GO:0110016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that positively regulates histone H3 acetylation, in particular H3K9, by recruiting histone acetyltransferases to rDNA gene regions. Located in the nucleolus where it assembles on RNA Polymerase I (Pol I) and possibly on RNA Polymerase III (Pol III) promoter and coding regions during early G1 phase and activates the post-initiation phases of Pol I transcription. May also activate RNA Polymerase II (Pol II) gene transcription. In mammals, B-WICH contains the WICH complex core of BAZ1B and SMARCA5, additional protein subunits and possibly rRNAs. Although it contains several catalytic subunits it is not clear which functions are carried out by the complex itself.","definition_xrefs":["PMID:26044184","GOC:bhm","PMID:23555303","PMID:16603771","PMID:21559432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"B-WICH complex","termid":"GO:0110016"}


id: PATO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's underlying structure being capable of change.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient","synonyms":[{"name":"transient structure","type":"exact"}],"termid":"PATO:0002292"}


id: GO:1905830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12432938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of prostaglandin catabolic process","termid":"GO:1905828"},{"relation_name":"positively_regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin catabolic process","synonyms":[{"name":"activation of prostaglandin breakdown","type":"narrow"},{"name":"activation of prostaglandin catabolic process","type":"narrow"},{"name":"activation of prostaglandin catabolism","type":"narrow"},{"name":"activation of prostaglandin degradation","type":"narrow"},{"name":"positive regulation of prostaglandin breakdown","type":"exact"},{"name":"positive regulation of prostaglandin catabolism","type":"exact"},{"name":"positive regulation of prostaglandin degradation","type":"exact"},{"name":"up regulation of prostaglandin breakdown","type":"exact"},{"name":"up regulation of prostaglandin catabolic process","type":"exact"},{"name":"up regulation of prostaglandin catabolism","type":"exact"},{"name":"up regulation of prostaglandin degradation","type":"exact"},{"name":"up-regulation of prostaglandin breakdown","type":"exact"},{"name":"up-regulation of prostaglandin catabolic process","type":"exact"},{"name":"up-regulation of prostaglandin catabolism","type":"exact"},{"name":"up-regulation of prostaglandin degradation","type":"exact"},{"name":"upregulation of prostaglandin breakdown","type":"exact"},{"name":"upregulation of prostaglandin catabolic process","type":"exact"},{"name":"upregulation of prostaglandin catabolism","type":"exact"},{"name":"upregulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905830"}


id: PBO:0017415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derived_into","termid":"PBO:0017415"}


id: PBO:0026686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_proline_level","termid":"PBO:0026686"}


id: PBO:0085334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine decarboxylase of the mitochondrial inner membrane; converts phosphatidylserine to phosphatidylethanolamine; regulates mitochondrial fusion and morphology; partly exposed to the mitochondrial intermembrane space; ER-localized fraction is involved in formation of lipid droplets; autocatalytically processed","termid":"PBO:0085334"}


id: PBO:0004820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C","termid":"PBO:0004820"}


id: PBO:0077735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS2 antisense RNA 1","termid":"PBO:0077735"}


id: PBO:0040789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional apoptosis regulator","termid":"PBO:0040789"}


id: GO:0043536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell migration","termid":"GO:0010595"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell migration","synonyms":[{"name":"activation of blood vessel endothelial cell migration","type":"narrow"},{"name":"stimulation of blood vessel endothelial cell migration","type":"narrow"},{"name":"up regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"up-regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"upregulation of blood vessel endothelial cell migration","type":"exact"}],"termid":"GO:0043536"}


id: GO:0061251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"}


id: PBO:0085252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; mediates Sey1p-independent homotypic ER fusion; forms Dsl1 tethering complex with Sec39p and Tip20p that forms a stable complex with ER SNAREs Sec20p, Ufe1p and Use1p and is functionally conserved from yeast to mammalian cells; component of the ER target site that interacts with coatomer; interacts with different subunits of COPI vesicle coat; interacts with Cin5p; homolog of fly and human ZW10 gene","termid":"PBO:0085252"}


id: PBO:0086018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086018"}


id: GO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone mediated signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone mediated signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid hormone mediated signaling pathway","synonyms":[{"name":"negative regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002156"}


id: PBO:0082208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; adds the fourth and fifth alpha-1,3-linked mannose residues to O-linked glycans during protein O-glycosylation","termid":"PBO:0082208"}


id: PBO:0017979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin/Birt-Hogg-Dube syndrome ortholog Bhd1","termid":"PBO:0017979"}


id: PBO:0042754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein W","termid":"PBO:0042754"}


id: PBO:0059130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH6 pseudogene 1","termid":"PBO:0059130"}


id: PBO:0066520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repulsive guidance molecule BMP co-receptor a","termid":"PBO:0066520"}


id: PBO:0056565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance domain containing 2","termid":"PBO:0056565"}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: GO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a plastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid nucleoid","termid":"GO:0042646"}


id: PBO:0082750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec13p-Sec31p complex of the COPII vesicle coat; COPII coat is required for vesicle formation in ER to Golgi transport; mutant has increased aneuploidy tolerance","termid":"PBO:0082750"}


id: PBO:0080932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAZ pseudogene 10","termid":"PBO:0080932"}


id: PATO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased virulence","termid":"PATO:0002148"}


id: GO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in a fully developed and mature organism, as described in insects.","definition_xrefs":["GOC:jid","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adult feeding behavior (sensu Insecta) (obsolete GO:0030535)","synonyms":[{"name":"adult feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0030535"}


id: GO:0140830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-glutamine(out) + Na+(out) = H+(out) + L-glutamine(in) + Na+(in).","definition_xrefs":["PMID:11850497","PMID:10619430","PMID:11742981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-glutamine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71127"],"termid":"GO:0140830"}


id: PBO:0109649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 2 (pseudogene)","termid":"PBO:0109649"}


id: MOD:01636
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-glutamic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid removal","termid":"MOD:01636"}


id: PBO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse transcriptional regulator, HCNGP-like (predicted)","termid":"PBO:0001245"}


id: PBO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S14 (predicted)","termid":"PBO:0001580"}


id: PBO:0063116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 2","termid":"PBO:0063116"}


id: GO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that regulates fever generation.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}


id: PBO:0071731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 29","termid":"PBO:0071731"}


id: MOD:01098
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a naphthylalanine.","definition_xrefs":["DeltaMass:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naphthylalanine residue","termid":"MOD:01098"}


id: GO:0035240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dopamine, a catecholamine neurotransmitter formed by aromatic-L-amino-acid decarboxylase from 3,4-dihydroxy-L-phenylalanine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dopamine binding","termid":"GO:0035240"}


id: PBO:0047213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM222A antisense RNA 1","termid":"PBO:0047213"}


id: FYPO:0006250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is abnormal. All tRNAs aminoacylation may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["GO:0006418","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal tRNA aminoacylation","synonyms":[{"name":"abnormal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"abnormal tRNA aminoacylation for protein translation","type":"exact"},{"name":"abnormal tRNA charging","type":"narrow"}],"termid":"FYPO:0006250"}


id: PBO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 42, pseudogene","termid":"PBO:0052802"}


id: GO:0016313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The removal of one of the phosphate groups from an inositol triphosphate to produce an inositol bisphosphate.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,5-trisphosphate phosphatase (obsolete GO:0016313)","synonyms":[{"name":"inositol-1,4,5-trisphosphate phosphatase","type":"exact"}],"termid":"GO:0016313"}


id: PBO:0073621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 7","termid":"PBO:0073621"}


id: PBO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B","termid":"PBO:0051940"}


id: FYPO:0002042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to iron ion starvation","termid":"FYPO:0003196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to iron ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to iron ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to iron starvation","type":"exact"},{"name":"decreased RNA level during iron ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to iron ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0002042"}


id: PATO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001004 absolute alternation value (obsolete PATO:0001004)","termid":"PATO:0001004"}


id: PBO:0071162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 1","termid":"PBO:0071162"}


id: GO:0071243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to arsenic-containing substance","synonyms":[{"name":"cellular response to arsenic","type":"exact"}],"termid":"GO:0071243"}


id: PBO:0003762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA turnover and ribosome assembly protein Mrt4 (predicted)","termid":"PBO:0003762"}


id: PBO:0088718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein Ppp1","termid":"PBO:0088718"}


id: GO:0090531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate GDP-alpha-D-mannose.","definition_xrefs":["GOC:yaf","PMID:11153268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-ascorbic acid biosynthetic process via GDP-alpha-D-mannose","secondary_identifiers":["BioCyc:PWY-882"],"synonyms":[{"name":"L-ascorbic acid biosynthesis via GDP-alpha-D-mannose","type":"related"},{"name":"Smirnoff-Wheeler's pathway","type":"related"}],"termid":"GO:0090531"}


id: PBO:0047522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free fatty acid receptor 2","termid":"PBO:0047522"}


id: GO:0101025
data:
  {"annotated_genes":["SJAG_03313","SJAG_04883","SJAG_04319","SJAG_04509","SJAG_03219","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89252,93882,84146,106519,94555,106113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101026"}]},"cv_name":"biological_process","definition":"The process in which a nuclear membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":6,"genes_by_uniquename":{"SJAG_03219":null,"SJAG_03313":null,"SJAG_04319":null,"SJAG_04509":null,"SJAG_04883":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0101025","terms_by_termid":{"GO:0101026":null}}


id: GO:0070221
data:
  {"annotated_genes":["SJAG_02599","SJAG_01239"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94456,104627],"is_not":false,"summary":null,"term":"GO:0070221"}]},"cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfide:quinone oxidoreductase.","definition_xrefs":["MetaCyc:P222-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01239":null,"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfide oxidation, using sulfide:quinone oxidoreductase","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfide oxidation, using sulfide-quinone reductase","type":"exact"},{"name":"sulphide oxidation, using sulfide:quinone oxidoreductase","type":"exact"}],"termid":"GO:0070221","terms_by_termid":{"GO:0070221":null}}


id: PR:Q8TFH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium transporter protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.11","secondary_identifiers":["UniProtKB:Q8TFH3"],"synonyms":[{"name":"Spom972h-MAGT1","type":"exact"},{"name":"oligosaccharyl transferase 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit OST3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH3"}


id: PBO:0076806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 3","termid":"PBO:0076806"}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: PBO:0087912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in iron utilization and homeostasis; binds consensus site PyPuCACCCPu and activates transcription in response to changes in iron availability; in iron-replete conditions localization is regulated by Grx3p, Grx4p, and Fra2p, and promoter binding is negatively regulated via Grx3p-Grx4p binding; AFT1 has a paralog, AFT2, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087912"}


id: MOD:00737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylneuraminic acid (sialic acid) group through a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylneuraminylated","synonyms":[{"name":"N-acetylneuraminic acid (Sialic acid, NeuAc, NANA, SA)","type":"exact"},{"name":"NeuNAc","type":"exact"}],"termid":"MOD:00737"}


id: GO:0032794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GTPase activating protein.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"GTPase activating protein binding","synonyms":[{"name":"GAP binding","type":"exact"}],"termid":"GO:0032794"}


id: PBO:0053922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1219","termid":"PBO:0053922"}


id: PBO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAP divergent transcript","termid":"PBO:0044545"}


id: PBO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_fasciculating_neuron_projection","termid":"PBO:0034172"}


id: GO:0042492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemopoietic cell acquires specialized features of a gamma-delta T cell. A gamma-delta T cell is a T cell that expresses a gamma-delta T cell receptor complex.","definition_xrefs":["GOC:jl","CL:0000798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell differentiation","synonyms":[{"name":"gamma-delta T cell development","type":"related"},{"name":"gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"gamma-delta T-cell differentiation","type":"exact"},{"name":"gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0042492"}


id: GO:1901144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of insulin.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin biosynthetic process (obsolete GO:1901144)","synonyms":[{"name":"insulin anabolism","type":"exact"},{"name":"insulin biosynthesis","type":"exact"},{"name":"insulin biosynthetic process","type":"exact"},{"name":"insulin formation","type":"exact"},{"name":"insulin synthesis","type":"exact"}],"termid":"GO:1901144"}


id: PBO:0029454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_N-glycan_processing","termid":"PBO:0029454"}


id: SO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mitochondrial gene located in a maxicircle.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast_gene","termid":"SO:0000089"},{"relation_name":"part_of","term_name":"maxicircle","termid":"SO:0000742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle_gene","synonyms":[{"name":"maxi-circle gene","type":"exact"},{"name":"maxicircle gene","type":"exact"}],"termid":"SO:0000654"}


id: PBO:0069869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1156, pseudogene","termid":"PBO:0069869"}


id: PBO:0018214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor, glutathione S-transferase (predicted)","termid":"PBO:0018214"}


id: PBO:0087190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC27; common to RNA polymerases I, II, and III; contacts DNA and affects transactivation","termid":"PBO:0087190"}


id: PBO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2","termid":"PBO:0051861"}


id: MOD:00770
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115520,115522,115521,115333,115523,115332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.01 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.01 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"termid":"MOD:00770","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0059482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage scavenger receptor 1","termid":"PBO:0059482"}


id: GO:2001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin A4 metabolic process","termid":"GO:2001302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipoxin A4 biosynthetic process","synonyms":[{"name":"LXA4 anabolism","type":"exact"},{"name":"LXA4 biosynthesis","type":"exact"},{"name":"LXA4 biosynthetic process","type":"exact"},{"name":"LXA4 formation","type":"exact"},{"name":"LXA4 synthesis","type":"exact"},{"name":"lipoxin A4 anabolism","type":"exact"},{"name":"lipoxin A4 biosynthesis","type":"exact"},{"name":"lipoxin A4 formation","type":"exact"},{"name":"lipoxin A4 synthesis","type":"exact"}],"termid":"GO:2001303"}


id: GO:0033894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing 3'-extranucleotides from tRNA precursor.","definition_xrefs":["EC:3.1.26.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"ribonuclease P4 activity","secondary_identifiers":["MetaCyc:3.1.26.7-RXN"],"termid":"GO:0033894"}


id: MOD:01943
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two adjacent residues by formation of a pyrrolidione ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolidione ring crosslinked residues","termid":"MOD:01943"}


id: SO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type II (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, +80 degrees < psi +120 degrees < +180 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_two","secondary_identifiers":["BS:00204"],"synonyms":[{"name":"asx turn left handed type two","type":"exact"},{"name":"asx_turn_iil","type":"exact"}],"termid":"SO:0001130"}


id: PBO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor Spt5","termid":"PBO:0000754"}


id: PBO:0067827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 129","termid":"PBO:0067827"}


id: PBO:0045833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 23","termid":"PBO:0045833"}


id: PBO:0088432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex associated ATPase Bud32","termid":"PBO:0088432"}


id: GO:1902567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"negatively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil activation","synonyms":[{"name":"down regulation of eosinophil activation","type":"exact"},{"name":"down-regulation of eosinophil activation","type":"exact"},{"name":"downregulation of eosinophil activation","type":"exact"},{"name":"inhibition of eosinophil activation","type":"narrow"}],"termid":"GO:1902567"}


id: FYPO:0008186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at the centromere central core is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 trimethylation at centromere central core during vegetative growth","termid":"FYPO:0008186"}


id: PBO:0073414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 20","termid":"PBO:0073414"}


id: PATO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mobility","termid":"PATO:0002283"}


id: PBO:0086403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ferric reductase with similarity to Fre2p; expression induced by low copper levels","termid":"PBO:0086403"}


id: PBO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Batten's disease","termid":"PBO:0001312"}


id: SO:0000672
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence that is conserved, although rearranged relative to the micronucleus, in the macronucleus of a ciliate genome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronucleus_destined_segment","synonyms":[{"name":"macronucleus destined segment","type":"exact"}],"termid":"SO:0000672"}


id: PR:O74371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.07c gene.","definition_xrefs":["UniProtKB:O74371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C32F12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.07c","synonyms":[{"name":"Spom972h-SPBC32F12.07c","type":"exact"}],"termid":"PR:O74371"}


id: PR:Q01475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein SAR1b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small COPII coat GTPase sar1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.06c","secondary_identifiers":["UniProtKB:Q01475"],"synonyms":[{"name":"SPBC31F10.06c","type":"related"},{"name":"Spom972h-SAR1B","type":"exact"}],"termid":"PR:Q01475"}


id: PBO:0076993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 8","termid":"PBO:0076993"}


id: PBO:0054058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1400","termid":"PBO:0054058"}


id: GO:0052631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of a double bond between C8 and C9 of the long chain base of a sphingolipid. For example, sphinganine (d18:0) = 8-sphingenine (d18:1delta8); phytosphinganine (t18:0) = 8-phytosphingenine (t18:1delta8); and 4-sphingenine (18:1delta4) = 4,8-sphingadienine (d18:2delta4,8).","definition_xrefs":["PMID:9786850","PMID:17600137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sphingolipid delta-8 desaturase activity","secondary_identifiers":["MetaCyc:RXN-7798","RHEA:46268"],"termid":"GO:0052631"}


id: PBO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, mitochondrial","termid":"PBO:0061565"}


id: PBO:0038934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1B (class I), beta polypeptide","termid":"PBO:0038934"}


id: PATO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000104 osmotic response sensitivity (obsolete PATO:0000104)","termid":"PATO:0000104"}


id: FYPO:0003285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to nutrient.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to nutrient","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to nutrient","type":"exact"},{"name":"decreased trehalase activity during cellular response to nutrient","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to nutrient","type":"exact"}],"termid":"FYPO:0003285"}


id: GO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oxaloacetate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate transmembrane transporter activity","termid":"GO:0015131"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"oxaloacetate secondary active transmembrane transporter activity","synonyms":[{"name":"oxaloacetate carrier activity","type":"related"}],"termid":"GO:0000227"}


id: PBO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.14.-","termid":"PBO:0001791"}


id: PBO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 14","termid":"PBO:0062171"}


id: GO:1904941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["PMID:23575307","GOC:BHF","GOC:bc","GO_REF:0000059","GOC:BHF_miRNA","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904941)","synonyms":[{"name":"activation of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"activation of TdT","type":"related"},{"name":"activation of addase activity","type":"narrow"},{"name":"activation of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of terminal addition enzyme activity","type":"related"},{"name":"activation of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"activation of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal transferase activity","type":"narrow"},{"name":"positive regulation of TdT","type":"related"},{"name":"positive regulation of addase activity","type":"exact"},{"name":"positive regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of terminal addition enzyme activity","type":"related"},{"name":"positive regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"positive regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal transferase activity","type":"exact"},{"name":"up regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of TdT","type":"related"},{"name":"up regulation of addase activity","type":"exact"},{"name":"up regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of terminal addition enzyme activity","type":"related"},{"name":"up regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal transferase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of TdT","type":"related"},{"name":"up-regulation of addase activity","type":"exact"},{"name":"up-regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of terminal addition enzyme activity","type":"related"},{"name":"up-regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up-regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal transferase activity","type":"exact"},{"name":"upregulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of TdT","type":"related"},{"name":"upregulation of addase activity","type":"exact"},{"name":"upregulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of terminal addition enzyme activity","type":"related"},{"name":"upregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"upregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904941"}


id: GO:0018940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen, and synthesized, probably as a fungicide, by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:orc","MetaCyc:P342-PWY"],"synonyms":[{"name":"orcin metabolic process","type":"exact"},{"name":"orcin metabolism","type":"exact"},{"name":"orcinol metabolism","type":"exact"}],"termid":"GO:0018940"}


id: GO:0018307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of part of an enzyme to form the active site.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation (obsolete GO:0018307)","termid":"GO:0018307"}


id: PR:P47979
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zfs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P47979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zfs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.07c","synonyms":[{"name":"Spom972h-zfs1","type":"exact"},{"name":"multicopy suppressor of overexpressed cyr1 protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P47979"}


id: PBO:0018223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3128, human c22orf39 ortholog","termid":"PBO:0018223"}


id: FYPO:0006144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gluconate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular gluconate level","synonyms":[{"name":"decreased cellular gluconate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular gluconate level during vegetative growth","type":"exact"},{"name":"decreased gluconate accumulation","type":"related"},{"name":"reduced cellular gluconate level","type":"exact"}],"termid":"FYPO:0006144"}


id: PBO:0041340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 putative open reading frame 36","termid":"PBO:0041340"}


id: PBO:0051392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant/OR22-2 (pseudogene)","termid":"PBO:0051392"}


id: PBO:0064149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 2","termid":"PBO:0064149"}


id: PBO:0053897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1182","termid":"PBO:0053897"}


id: GO:0097699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","PMID:21768538","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to fluid shear stress","type":"exact"}],"termid":"GO:0097699"}


id: PBO:0042201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G1 pseudogene 1","termid":"PBO:0042201"}


id: PBO:0075732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 divergent transcript","termid":"PBO:0075732"}


id: MOD:01225
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue into an L-fluorotyrosine.","definition_xrefs":["Unimod:127#Y","OMSSA:46","PubMed:8069568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated tyrosine","termid":"MOD:00985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-tyrosine","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"},{"name":"phef","type":"exact"}],"termid":"MOD:01225"}


id: PR:Q9C102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate synthase [NADPH] large chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase [NADPH] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.07","secondary_identifiers":["UniProtKB:Q9C102"],"synonyms":[{"name":"NADPH-GOGAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gltB","type":"exact"}],"termid":"PR:Q9C102"}


id: PBO:0026975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_in_mitochondrion","termid":"PBO:0026975"}


id: GO:1904998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","GO_REF:0000058","PMID:22267480","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904995"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"},{"relation_name":"negatively_regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte adhesion to arterial endothelial cell","synonyms":[{"name":"down regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"down-regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"downregulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"inhibition of leukocyte adhesion to arterial endothelial cell","type":"narrow"}],"termid":"GO:1904998"}


id: GO:0008802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: betaine aldehyde + NAD+ + H2O = betaine + NADH + H+.","definition_xrefs":["EC:1.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"betaine-aldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:BADH-RXN","Reactome:R-HSA-6797955","RHEA:15305"],"synonyms":[{"name":"BADH activity","type":"related"},{"name":"BetB","type":"related"},{"name":"betaine aldehyde dehydrogenase activity","type":"related"},{"name":"betaine aldehyde oxidase activity","type":"related"},{"name":"betaine-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008802"}


id: GO:0120026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host cell membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively.","definition_xrefs":["PMID:24965475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell projection","termid":"GO:0044157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell uropod","synonyms":[{"name":"host cell uropodium","type":"exact"}],"termid":"GO:0120026"}


id: PBO:0038763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3C","termid":"PBO:0038763"}


id: PBO:0000683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear HMG-like acidic protein Mak16 (predicted)","termid":"PBO:0000683"}


id: PBO:0089381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate transmembrane transporter","termid":"PBO:0089381"}


id: GO:2000870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of progesterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"progesterone secretion","termid":"GO:0042701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of progesterone secretion","termid":"GO:2000870"}


id: PBO:0048813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 2","termid":"PBO:0048813"}


id: GO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the metanephros progresses from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in metanephros development (obsolete GO:0072212)","termid":"GO:0072212"}


id: PBO:0028625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization","termid":"PBO:0028625"}


id: GO:0075035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which specialized features of the symbiont appressorium are acquired post initiation, to aid in infection of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium maturation","synonyms":[{"name":"appressorium maturation on or near host","type":"exact"},{"name":"maturation of appressorium on or near host","type":"related"},{"name":"maturation of symbiont appressorium on or near host","type":"exact"}],"termid":"GO:0075035"}


id: PBO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group A","termid":"PBO:0047274"}


id: PBO:0080837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 1","termid":"PBO:0080837"}


id: PBO:0059190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member F","termid":"PBO:0059190"}


id: FYPO:0000848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of one or more chromosomes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal chromosome morphology","termid":"FYPO:0005600"},{"relation_name":"output_of","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0000641","FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome morphology during vegetative growth","synonyms":[{"name":"abnormal chromosome morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000848"}


id: GO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pectate = a pectate + 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate. This reaction is the eliminative cleavage of 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate from the reducing end of pectate, i.e. de-esterified pectin.","definition_xrefs":["EC:4.2.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"pectate disaccharide-lyase activity","secondary_identifiers":["RHEA:57104","MetaCyc:4.2.2.9-RXN"],"synonyms":[{"name":"(1->4)-alpha-D-galacturonan reducing-end-disaccharide-lyase activity","type":"related"},{"name":"Exo-PATE activity","type":"related"},{"name":"Exo-PGL activity","type":"related"},{"name":"PATE activity","type":"related"},{"name":"exo-PATE","type":"related"},{"name":"exo-PGL","type":"related"},{"name":"exopectate lyase activity","type":"related"},{"name":"exopectic acid transeliminase activity","type":"related"},{"name":"exopolygalacturonate lyase activity","type":"related"},{"name":"exopolygalacturonic acid-trans-eliminase activity","type":"related"},{"name":"pectate exo-lyase activity","type":"related"}],"termid":"GO:0047489"}


id: PBO:0072023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 10","termid":"PBO:0072023"}


id: PBO:0050969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 4","termid":"PBO:0050969"}


id: PBO:0036196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_export_from_nucleus_during_vegetative_growth","termid":"PBO:0036196"}


id: GO:0033551
data:
  {"annotated_genes":["SJAG_00646","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84251,107872],"is_not":false,"summary":null,"term":"GO:0033551"}]},"cv_name":"cellular_component","definition":"A protein complex required for clamping microtubule binding sites, ensuring orientation of sister kinetochores to the same pole (mono-orientation) during meiosis I. In the yeast S. cerevisiae this complex consists of Csm1p, Lrs4p, Hrr25p and Mam1p; in S. pombe Psc1 and Mde4 have been identified as subunits.","definition_xrefs":["PMID:17627824","GOC:mah","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0032991","GO:0000776","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"monopolin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Pcs1/Mde4 complex","type":"narrow"},{"name":"monopolin subcomplex Csm1/Lrs4","type":"narrow"}],"termid":"GO:0033551","terms_by_termid":{"GO:0033551":null}}


id: PBO:0045559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8 pseudogene 5","termid":"PBO:0045559"}


id: PR:000037084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 homodimer (Schizosaccharomyces pombe) that is composed of two subunits of the acetylated form of tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","termid":"PR:000037083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer, acetylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8/AcRes+)*2","type":"exact"}],"termid":"PR:000037084"}


id: PBO:0082145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA-binding protein; transports newly synthesized acyl-CoA esters from fatty acid synthetase (Fas1p-Fas2p) to acyl-CoA-consuming processes; subject to starvation-induced, Grh1p-mediated unconventional secretion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082145"}


id: GO:0036100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"leukotriene catabolic process","synonyms":[{"name":"leukotriene breakdown","type":"exact"},{"name":"leukotriene catabolism","type":"exact"},{"name":"leukotriene degradation","type":"exact"}],"termid":"GO:0036100"}


id: GO:2000917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucuronoxylan catabolic process","synonyms":[{"name":"positive regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000917"}


id: PBO:0073547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and multiple ankyrin repeat domains 1","termid":"PBO:0073547"}


id: PATO:0000895
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000895 f1 fertility value (obsolete PATO:0000895)","termid":"PATO:0000895"}


id: PATO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000663 occurrent (obsolete PATO:0000663)","termid":"PATO:0000663"}


id: GO:1904434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferrous iron binding.","definition_xrefs":["PMID:18353247","GOC:TermGenie","GOC:kom","GO_REF:0000059","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"},{"relation_name":"is_a","term_name":"regulation of ferrous iron binding","termid":"GO:1904432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferrous iron binding","synonyms":[{"name":"activation of ferrous iron binding","type":"narrow"},{"name":"up regulation of ferrous iron binding","type":"exact"},{"name":"up-regulation of ferrous iron binding","type":"exact"},{"name":"upregulation of ferrous iron binding","type":"exact"}],"termid":"GO:1904434"}


id: GO:2000488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of brassinosteroid biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"},{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"positively_regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of brassinosteroid biosynthetic process","synonyms":[{"name":"positive regulation of brassinosteroid anabolism","type":"exact"},{"name":"positive regulation of brassinosteroid biosynthesis","type":"exact"},{"name":"positive regulation of brassinosteroid formation","type":"exact"},{"name":"positive regulation of brassinosteroid synthesis","type":"exact"}],"termid":"GO:2000488"}


id: PBO:0073098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 2","termid":"PBO:0073098"}


id: GO:0080126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ovary septum over time, from its formation to the mature structure. The ovary septum is the thin partition that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s).","definition_xrefs":["PMID:17855426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant septum development","termid":"GO:1905328"},{"relation_name":"part_of","term_name":"plant-type ovary development","termid":"GO:0035670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovary septum development","termid":"GO:0080126"}


id: GO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-beta-D-glucosaminylamine + L-aspartate + H+.","definition_xrefs":["EC:3.5.1.26","RHEA:11544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity","secondary_identifiers":["KEGG_REACTION:R03421","MetaCyc:3.5.1.26-RXN"],"synonyms":[{"name":"4-N-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"N-aspartyl-beta-glucosaminidase activity","type":"related"},{"name":"N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"aspartylglucosaminidase activity","type":"related"},{"name":"aspartylglucosylaminase activity","type":"related"},{"name":"aspartylglucosylamine deaspartylase activity","type":"related"},{"name":"aspartylglucosylaminidase activity","type":"related"},{"name":"aspartylglycosylamine amidohydrolase activity","type":"related"},{"name":"beta-aspartylglucosylamine amidohydrolase activity","type":"related"},{"name":"glucosylamidase activity","type":"related"},{"name":"glycosylasparaginase activity","type":"related"}],"termid":"GO:0003948"}


id: GO:0075188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hyphopodium formation","synonyms":[{"name":"regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075188"}


id: PBO:0044407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily E member 1","termid":"PBO:0044407"}


id: PBO:0059668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 34","termid":"PBO:0059668"}


id: PBO:0054686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2094","termid":"PBO:0054686"}


id: FYPO:0008040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in a cell is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4,5-bisphosphate level","synonyms":[{"name":"increased phosphatidylinositol-4,5-bisphosphate level in cell","type":"exact"}],"termid":"FYPO:0008040"}


id: PBO:0057118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203a","termid":"PBO:0057118"}


id: PBO:0038655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 5, tartrate resistant","termid":"PBO:0038655"}


id: GO:1905276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["PMID:25745997","GOC:TermGenie","GO_REF:0000058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial tube formation","termid":"GO:1905276"}


id: GO:0004569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal alpha-glucosyl-(1,3)-mannosyl unit from Glc-Man(9)-(GlcNAc)(2) oligosaccharide component of the glycoprotein produced in the Golgi membrane.","definition_xrefs":["EC:3.2.1.130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glycoprotein endo-alpha-1,2-mannosidase activity","secondary_identifiers":["Reactome:R-HSA-964759","RHEA:54824","MetaCyc:3.2.1.130-RXN"],"synonyms":[{"name":"endo-alpha-mannosidase activity","type":"related"},{"name":"endomannosidase activity","type":"related"},{"name":"glucosyl mannosidase activity","type":"related"},{"name":"glucosylmannosidase activity","type":"related"},{"name":"glycoprotein glucosylmannohydrolase activity","type":"related"}],"termid":"GO:0004569"}


id: PBO:0058316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4689","termid":"PBO:0058316"}


id: GO:0032110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein histidine kinase activity","termid":"GO:0032110"}


id: GO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction","termid":"GO:0002507"}


id: GO:0140540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanotic encapsulation of foreign target.","definition_xrefs":["PMID:15749104","PMID:18457993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of melanization defense response","termid":"GO:0035009"},{"relation_name":"is_a","term_name":"regulation of melanotic encapsulation of foreign target","termid":"GO:0140539"},{"relation_name":"negatively_regulates","term_name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation melanotic encapsulation of foreign target","termid":"GO:0140540"}


id: PBO:0055681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member J","termid":"PBO:0055681"}


id: GO:0038146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the chemokine CXCL12 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn","Wikipedia:Stromal_cell-derived_factor-1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 12 signaling pathway","synonyms":[{"name":"CXCL12 signaling pathway","type":"exact"},{"name":"CXCL12-activated CXCR7 signaling pathway","type":"narrow"},{"name":"SDF1 signaling pathway","type":"exact"},{"name":"stromal cell-derived factor-1 signaling pathway","type":"exact"}],"termid":"GO:0038146"}


id: GO:0048624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a new plantlet develops from a meristem on the plant body. As part of this process, when the plantlet is large enough to live independently, the physical connection between the new plantlet and the main plant is severed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"asexual reproduction","termid":"GO:0019954"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plantlet formation on parent plant","synonyms":[{"name":"vegetative vivipary","type":"broad"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048624"}


id: PBO:0045614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 25 (pseudogene)","termid":"PBO:0045614"}


id: PBO:0064119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 6","termid":"PBO:0064119"}


id: PBO:0044479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 2","termid":"PBO:0044479"}


id: PBO:0084511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family; this family has seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane; regulated by sterol binding","termid":"PBO:0084511"}


id: SO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 57 to 71 nucleotide RNA that is a component of the U7 small nuclear ribonucleoprotein complex (U7 snRNP). The U7 snRNP is required for histone pre-mRNA processing.","definition_xrefs":["PMID:15526162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U7_snRNA","synonyms":[{"name":"U7 small nuclear RNA","type":"exact"},{"name":"U7 snRNA","type":"exact"},{"name":"small nuclear RNA U7","type":"exact"},{"name":"snRNA U7","type":"exact"}],"termid":"SO:0002338"}


id: PBO:0012528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_specification_of","termid":"PBO:0012528"}


id: PBO:0067062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 87, pseudogene","termid":"PBO:0067062"}


id: PBO:0056470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase like","termid":"PBO:0056470"}


id: GO:0045884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of survival gene product expression (obsolete GO:0045884)","synonyms":[{"name":"regulation of survival gene product activity","type":"broad"},{"name":"regulation of survival gene product expression","type":"exact"},{"name":"regulation of survival gene products","type":"broad"}],"termid":"GO:0045884"}


id: SO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where there has been exchange of genetic material in the event of mitosis or meiosis","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"recombination feature","type":"exact"}],"termid":"SO:0000298"}


id: PBO:0043338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 transmembrane ER and ERGIC protein","termid":"PBO:0043338"}


id: FYPO:0005497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from RNA polymerase II promoter","termid":"FYPO:0003796"},{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abolished transcription from CRE promoter","synonyms":[{"name":"abolished transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished","type":"related"},{"name":"transcription from CRE promoter abolished","type":"exact"}],"termid":"FYPO:0005497"}


id: PBO:0074503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 2","termid":"PBO:0074503"}


id: PBO:0049731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis A virus cellular receptor 1 pseudogene 2","termid":"PBO:0049731"}


id: PBO:0050899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma inducible protein 16","termid":"PBO:0050899"}


id: PBO:0057028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 125a","termid":"PBO:0057028"}


id: PBO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ transcription initiation factor Taf9","termid":"PBO:0000296"}


id: PBO:0047404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 42","termid":"PBO:0047404"}


id: GO:0099627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during which neurotransmitter receptors, anchored in some region of the synaptic membrane, are recycled via the endosome. This cycle includes release from anchoring, diffusion in the synaptic membrane to an endocytic region, endocytosis, transport to the endosome, recycling in the endosome, transport back the synaptic membrane and subsequent anchoring (trapping).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter receptor cycle","termid":"GO:0099627"}


id: GO:0032228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"}


id: PBO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp6","termid":"PBO:0003229"}


id: FYPO:0003970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PomBase:mah","PMID:12455694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with chromatin bridge","type":"related"},{"name":"incomplete sister chromatid segregation, with chromatin bridge during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003970"}


id: FYPO:0001126
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115590,115514,115526],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115482],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"},{"annotations":[115613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[115435,115441,115467,115430],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115407,115414,115408],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"},{"annotations":[115412,115413],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":14,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D 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shape","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00028","SJAG_04280","SJAG_00514","SJAG_00266","SJAG_02592","SJAG_04332","SJAG_04312","SJAG_02819","SJAG_04703","SJAG_03453","SJAG_01794","SJAG_03581","SJAG_03048","SJAG_04522"],"single_locus_genotype_uniquenames":["sty1delta","rga6delta","for3delta","ras1delta","pka1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","gef1delta","atf1delta","rga4delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","efc25delta"],"synonyms":[{"name":"misshapen cell","type":"related"}],"termid":"FYPO:0001126","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PATO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being upright in position or posture.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erect","synonyms":[{"name":"upright","type":"exact"}],"termid":"PATO:0000622"}


id: GO:0090347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"cellular organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular organohalogen metabolic process","termid":"GO:0090347"}


id: MOD:00531
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid with one (18)O as the result of having been deglycosylated in (18)O water.","definition_xrefs":["PubMed:14435542","Unimod:170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated L-asparagine","termid":"MOD:01293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deglycosylated asparagine","synonyms":[{"name":"Delta:H(1)O(-1)18O(1)","type":"related"},{"name":"glycosylated asparagine 18O labeling","type":"related"}],"termid":"MOD:00531"}


id: SO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that, at least in part, encodes one or more proteins that has not been edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_primary_transcript","termid":"SO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_edited_mRNA","synonyms":[{"name":"pre-edited mRNA","type":"exact"}],"termid":"SO:0000932"}


id: GO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of an antibacterial peptide during an immune response, resulting in an increase in intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11807545","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide production","termid":"GO:0002775"},{"relation_name":"part_of","term_name":"antibacterial humoral response","termid":"GO:0019731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antibacterial peptide production","termid":"GO:0002778"}


id: GO:1905051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of base-excision repair.","definition_xrefs":["GOC:ah","PMID:18973764","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"regulation of base-excision repair","synonyms":[{"name":"regulation of BER","type":"exact"}],"termid":"GO:1905051"}


id: PBO:0052654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 22","termid":"PBO:0052654"}


id: FYPO:0005516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in regions of euchromatin. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:22990236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in euchromatin","termid":"FYPO:0000854"},{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy in euchromatin","synonyms":[{"name":"decreased nucleosome occupancy in euchromatin during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy in euchromatin during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy in euchromatin","type":"exact"}],"termid":"FYPO:0005516"}


id: PBO:0084456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER); essential for viability; human homolog ALG1 complements yeast null mutant","termid":"PBO:0084456"}


id: PBO:0040262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 16 like 1","termid":"PBO:0040262"}


id: PBO:0085930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial protein that physically interacts with Tim23p; null mutant displays reduced respiratory growth","termid":"PBO:0085930"}


id: SO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is transcribed from the outer repeat region of a regional centromere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_outer_repeat_transcript","synonyms":[{"name":"centromere outer repeat transcript","type":"exact"},{"name":"regional centromere outer repeat region transcript","type":"exact"},{"name":"regional_centromere_outer_repeat_region_transcript","type":"exact"}],"termid":"SO:0001905"}


id: GO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:29150447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"chloramphenicol transmembrane transport","synonyms":[{"name":"chloramphenicol transport","type":"broad"}],"termid":"GO:0042892"}


id: PBO:0040716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7B","termid":"PBO:0040716"}


id: PBO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID domain","termid":"PBO:0001189"}


id: PBO:0031118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_processing","termid":"PBO:0031118"}


id: GO:0140084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of haploid amoebae cells with matching mating types to form a larger cell, which ingests additional amoebae and forms a cellulose wall. The resulting macrocyst undergoes recombination and meiosis followed by release of haploid amoebae. An example of this process can be found in Dictyostelium discoideum.","definition_xrefs":["PMID:20089169","PMID:16592095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sexual macrocyst formation","synonyms":[{"name":"macrocyst formation","type":"related"},{"name":"sexual fusion","type":"related"}],"termid":"GO:0140084"}


id: FYECO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cysteine","synonyms":[{"name":"C added","type":"exact"},{"name":"Cys added","type":"exact"}],"termid":"FYECO:0000179"}


id: PBO:0054582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1985","termid":"PBO:0054582"}


id: PATO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a lesser than normal extent, or less than fully.","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/hypophosphorylated"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"phosphorylated","termid":"PATO:0002220"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased phosphorylation","synonyms":[{"name":"hypophosporylated ","type":"exact"}],"termid":"PATO:0002222"}


id: SO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000971 DNA_replication_mode (obsolete SO:0000971)","synonyms":[{"name":"DNA replication mode","type":"exact"}],"termid":"SO:0000971"}


id: GO:0032981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex assembly","termid":"GO:0010257"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I assembly","synonyms":[{"name":"mitochondrial NADH dehydrogenase complex (ubiquinone) assembly","type":"exact"},{"name":"mitochondrial complex I assembly","type":"exact"}],"termid":"GO:0032981"}


id: PBO:0088412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4","termid":"PBO:0088412"}


id: GO:1904996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:bc","PMID:23897866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to vascular endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to vascular endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to vascular endothelial cell","type":"exact"}],"termid":"GO:1904996"}


id: PR:P48008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.01","synonyms":[{"name":"Spom972h-spn3","type":"exact"}],"termid":"PR:P48008"}


id: GO:0070234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"positively_regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell apoptotic process","synonyms":[{"name":"activation of T cell apoptosis","type":"narrow"},{"name":"positive regulation of T cell apoptosis","type":"narrow"},{"name":"positive regulation of T lymphocyte apoptosis","type":"exact"},{"name":"positive regulation of T-cell apoptosis","type":"exact"},{"name":"positive regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death of T cells by apoptosis","type":"exact"},{"name":"stimulation of T cell apoptosis","type":"narrow"},{"name":"up regulation of T cell apoptosis","type":"exact"},{"name":"up-regulation of T cell apoptosis","type":"exact"},{"name":"upregulation of T cell apoptosis","type":"exact"}],"termid":"GO:0070234"}


id: GO:0022884
data:
  {"annotated_genes":["SJAG_02077","SJAG_02208","SJAG_04218","SJAG_03358","SJAG_00175","SJAG_01640","SJAG_00373","SJAG_03415","SJAG_01879","SJAG_03515","SJAG_01597","SJAG_02330","SJAG_00959","SJAG_03560","SJAG_05259","SJAG_04996","SJAG_03502"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105834,103485,102357,94253,102352,95615,111410,105540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[87116,95722,99473,101365,107996,103764,93085,96500,103786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a macromolecule from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00959":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"macromolecule transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022884","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: PBO:0080812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 2","termid":"PBO:0080812"}


id: GO:0140790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone serine phosphate + H2O = histone serine + phosphate, and histone threonine phosphate + H2O = histone threonine + phosphate.","definition_xrefs":["PMID:18614045"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine/threonine phosphatase activity (obsolete GO:0140790)","termid":"GO:0140790"}


id: PBO:0062734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 1 (gene/pseudogene)","termid":"PBO:0062734"}


id: PBO:0044772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 54","termid":"PBO:0044772"}


id: PBO:0070282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 23","termid":"PBO:0070282"}


id: PBO:0050613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 6","termid":"PBO:0050613"}


id: GO:1904789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring maintenance.","definition_xrefs":["GOC:TermGenie","PMID:24115772","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring maintenance (obsolete GO:1904789)","synonyms":[{"name":"regulation of contractile ring maintenance involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of cytokinesis, contractile ring maintenance, involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1904789"}


id: PATO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000098 insecticide sensitivity (obsolete PATO:0000098)","termid":"PATO:0000098"}


id: SO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron (mitochondrial, chloroplast, nuclear or prokaryotic) that encodes a double strand sequence specific endonuclease allowing for mobility.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"mobile","termid":"SO:0001234"},{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"},{"relation_name":"is_a","term_name":"mobile_genetic_element","termid":"SO:0001037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_intron","synonyms":[{"name":"mobile intron","type":"exact"}],"termid":"SO:0000666"}


id: FYPO:0000737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic spindle assembly","synonyms":[{"name":"abnormal spindle assembly involved in meiosis","type":"exact"}],"termid":"FYPO:0000737"}


id: PBO:0012274
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP2","termid":"PBO:0012274"}


id: _global:exemplar_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is exemplar of Y if X is the best evidence for Y.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_of","termid":"_global:exemplar_of"}


id: PBO:0057129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 212","termid":"PBO:0057129"}


id: PBO:0083647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin A; F-box protein that forms a heterodimer with Elc1p and is required for ubiquitin-dependent degradation of the RNA Polymerase II subunit Rpo21p; subunit of the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0083647"}


id: PBO:0077916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 7","termid":"PBO:0077916"}


id: GO:1903082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of C-C chemokine receptor CCR7 signaling pathway.","definition_xrefs":["GO_REF:0000058","PMID:11602640","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine-mediated signaling pathway","termid":"GO:0070101"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine receptor CCR7 signaling pathway","termid":"GO:1903080"},{"relation_name":"positively_regulates","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"activation of C-C chemokine receptor CCR7 signaling pathway","type":"narrow"},{"name":"activation of C-C chemokine receptor CCR7 signalling pathway","type":"narrow"},{"name":"activation of CCR7 signaling pathway","type":"related"},{"name":"positive regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"positive regulation of CCR7 signaling pathway","type":"related"},{"name":"up regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up regulation of CCR7 signaling pathway","type":"related"},{"name":"up-regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up-regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up-regulation of CCR7 signaling pathway","type":"related"},{"name":"upregulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"upregulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"upregulation of CCR7 signaling pathway","type":"related"}],"termid":"GO:1903082"}


id: GO:0008625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with a ligand binding to a death domain receptor on the cell surface, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"induction of apoptosis via death domain receptors","type":"related"},{"name":"induction of apoptosis via death receptors","type":"exact"}],"termid":"GO:0008625"}


id: SO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Endogenous DNA sequence that are likely to have arisen from retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"proviral_location","termid":"SO:0000751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous_retroviral_sequence","synonyms":[{"name":"endogenous retroviral sequence","type":"exact"}],"termid":"SO:0000903"}


id: GO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a mineralocorticoid and transmitting the signal to the transcriptional machinery by binding to a specific DNA sequence in order to modulate transcription by RNA polymerase II.","definition_xrefs":["PMID:20932876","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete mineralocorticoid receptor activity (obsolete GO:0017082)","synonyms":[{"name":"aldosterone receptor","type":"narrow"}],"termid":"GO:0017082"}


id: GO:0048875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the tissue.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within a tissue (obsolete GO:0048875)","termid":"GO:0048875"}


id: GO:0102376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lupeol + 3 NADPH + 3 O2 + 3 H+ = betulinic acid + 3 NADP + 4 H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"lupeol 28-oxidase activity","secondary_identifiers":["MetaCyc:RXN-13507"],"termid":"GO:0102376"}


id: GO:1902814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10499580","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902814)","synonyms":[{"name":"activation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"activation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"positive regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"positive regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"upregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902814"}


id: GO:0050096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: threo-3-methyl-L-aspartate = mesaconate + NH4.","definition_xrefs":["RHEA:12829","EC:4.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"methylaspartate ammonia-lyase activity","secondary_identifiers":["MetaCyc:METHYLASPARTATE-AMMONIA-LYASE-RXN","KEGG_REACTION:R03696"],"synonyms":[{"name":"3-methylaspartase activity","type":"related"},{"name":"L-threo-3-methylaspartate ammonia-lyase (mesaconate-forming)","type":"related"},{"name":"L-threo-3-methylaspartate ammonia-lyase activity","type":"related"},{"name":"beta-methylaspartase activity","type":"related"}],"termid":"GO:0050096"}


id: FYPO:0006620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal when the cell is returned to glucose-rich medium following glucose starvation.","definition_xrefs":["GO:0006325","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromatin organization during recovery from glucose starvation","synonyms":[{"name":"abnormal chromatin organisation during recovery from glucose starvation","type":"exact"},{"name":"abnormal chromatin organization during recovery from glucose depletion","type":"exact"},{"name":"abnormal chromatin organization during recovery from glucose deprivation","type":"exact"},{"name":"abnormal chromatin organization during recovery from glucose limitation","type":"related"},{"name":"abnormal chromatin organization following glucose starvation","type":"exact"}],"termid":"FYPO:0006620"}


id: PBO:0076619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor B","termid":"PBO:0076619"}


id: PBO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 5","termid":"PBO:0042270"}


id: PBO:0082513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex; uses the cofactor acetyl coenzyme A to acetylate free nuclear and cytoplasmic histone H4; involved in telomeric silencing and DNA double-strand break repair","termid":"PBO:0082513"}


id: GO:0071364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to epidermal growth factor","termid":"GO:0070849"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to epidermal growth factor stimulus","synonyms":[{"name":"cellular response to EGF stimulus","type":"exact"}],"termid":"GO:0071364"}


id: PBO:0068287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit C pseudogene 1","termid":"PBO:0068287"}


id: PBO:0069660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 937, pseudogene","termid":"PBO:0069660"}


id: GO:1900204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric collecting duct development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:TermGenie","GOC:yaf","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric collecting duct development","termid":"GO:0072205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900204"}


id: PBO:0059780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 6","termid":"PBO:0059780"}


id: PBO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 2","termid":"PBO:0075329"}


id: PBO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase Srm1 (predicted)","termid":"PBO:0017989"}


id: GO:0046797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The refolding and structural rearrangements of individual capsid subunits to transition from the intermediate procapsid, to the more stable capsid structure.","definition_xrefs":["GOC:bf","PMID:10627558","PMID:19204733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"viral capsid assembly","termid":"GO:0019069"},{"relation_name":"part_of","term_name":"virus maturation","termid":"GO:0019075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"viral procapsid maturation","secondary_identifiers":["UniProtKB-KW:KW-1273"],"synonyms":[{"name":"capsid maturation","type":"exact"},{"name":"viral capsid maturation","type":"exact"},{"name":"virion maturation","type":"broad"}],"termid":"GO:0046797"}


