# terms

id: PBO:0068795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 32, pseudogene","termid":"PBO:0068795"}


id: PBO:0016043
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat PTBP3","termid":"PBO:0016043"}


id: GO:0052395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont nitric oxide production (obsolete GO:0052395)","synonyms":[{"name":"activation by organism of defense-related symbiont NO production","type":"exact"},{"name":"activation by organism of defense-related symbiont nitric acid production","type":"exact"},{"name":"induction by organism of defense-related symbiont NO production","type":"exact"},{"name":"induction by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052395"}


id: PBO:0075859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 7","termid":"PBO:0075859"}


id: PBO:0070695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 4","termid":"PBO:0070695"}


id: PBO:0034560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_mitotic_S_phase","termid":"PBO:0034560"}


id: MOD:01657
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form N6-Dabsyl-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Dabsyl derivatized lysine","synonyms":[{"name":"N6-[4-([4-(dimethylamino)phenyl]diazenyl)benzenesulfonyl]lysine","type":"exact"},{"name":"N6DabsylLys","type":"exact"}],"termid":"MOD:01657"}


id: GO:0030821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP catabolic process (obsolete GO:0030821)","synonyms":[{"name":"down regulation of cAMP catabolic process","type":"exact"},{"name":"down-regulation of cAMP catabolic process","type":"exact"},{"name":"downregulation of cAMP catabolic process","type":"exact"},{"name":"inhibition of cAMP catabolic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP catabolic process","type":"exact"},{"name":"negative regulation of 3',5' cAMP catabolism","type":"exact"},{"name":"negative regulation of 3',5'-cAMP catabolic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP catabolism","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate catabolic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate catabolism","type":"exact"},{"name":"negative regulation of cAMP breakdown","type":"exact"},{"name":"negative regulation of cAMP catabolism","type":"exact"},{"name":"negative regulation of cAMP degradation","type":"exact"},{"name":"negative regulation of cyclic AMP catabolic process","type":"exact"},{"name":"negative regulation of cyclic AMP catabolism","type":"exact"}],"termid":"GO:0030821"}


id: RO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a muscle and a motor neuron that synapses to it via a type III bouton.\\n","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_by","termid":"RO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_by_via_type_III_bouton","termid":"RO:0002115"}


id: GO:0097356
data:
  {"annotated_genes":["SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114697],"is_not":false,"summary":null,"term":"GO:0097356"}]},"cv_name":"cellular_component","definition":"The perinucleolar compartment (PNC) is a subnuclear structure associated with, but structurally distinct from, the nucleolus. The PNC contains large amounts of the heterogeneous nuclear ribonucleoprotein complex (hnRNP) called hnRNP 1 (PTB). Many RNA binding proteins as well as RNA polymerase III transcripts are highly enriched in this compartment. PTB and pol III transcripts are required for the integrity of the PNC.","definition_xrefs":["GOC:vw","Wikipedia:Perinucleolar_compartment","PMID:21385875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"perinucleolar compartment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perinucleolar region","type":"exact"}],"termid":"GO:0097356","terms_by_termid":{"GO:0097356":null}}


id: PBO:0058662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6790","termid":"PBO:0058662"}


id: GO:0102351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-aminobutyric acid + 2-oxo monocarboxylic acid anion = 4-oxobutanoate + glycine.","definition_xrefs":["EC:2.6.1.96","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"gamma-aminobutyrate transaminase (glyoxylate dependent) activity","secondary_identifiers":["MetaCyc:RXN-13328","RHEA:32267"],"termid":"GO:0102351"}


id: GO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriocin, any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"bacteriocin metabolic process","termid":"GO:0046224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"bacteriocin biosynthetic process","synonyms":[{"name":"bacteriocin anabolism","type":"exact"},{"name":"bacteriocin biosynthesis","type":"exact"},{"name":"bacteriocin formation","type":"exact"},{"name":"bacteriocin synthesis","type":"exact"}],"termid":"GO:0030152"}


id: FYPO:0001155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the changes that take place in growth medium, due to metabolism, secretion, etc. by a cell or population of cells, differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"altered effect on growth medium","synonyms":[{"name":"abnormal effect on growth medium","type":"exact"}],"termid":"FYPO:0001155"}


id: GO:0043468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of fucose.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fucose catabolic process","termid":"GO:0019317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of fucose catabolic process","termid":"GO:0043468"}


id: PBO:0067155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 205, pseudogene","termid":"PBO:0067155"}


id: PBO:0038543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD15 antisense RNA 1","termid":"PBO:0038543"}


id: GO:1904443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["PMID:17646383","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of thyroid gland epithelial cell proliferation","termid":"GO:1904441"},{"relation_name":"positively_regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"activation of Hurthle cell proliferation","type":"narrow"},{"name":"activation of thyroid follicular cell proliferation","type":"narrow"},{"name":"activation of thyroid gland epithelial cell proliferation","type":"narrow"},{"name":"positive regulation of Hurthle cell proliferation","type":"narrow"},{"name":"positive regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"up regulation of Hurthle cell proliferation","type":"narrow"},{"name":"up regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"up regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"up-regulation of Hurthle cell proliferation","type":"narrow"},{"name":"up-regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"up-regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"upregulation of Hurthle cell proliferation","type":"narrow"},{"name":"upregulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"upregulation of thyroid gland epithelial cell proliferation","type":"exact"}],"termid":"GO:1904443"}


id: GO:0032609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:add","GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"type II interferon production","secondary_identifiers":["GO:0042095","GO:0072643"],"synonyms":[{"name":"IFNG production","type":"exact"},{"name":"interferon-gamma biosynthetic process","type":"narrow"},{"name":"interferon-gamma production","type":"exact"},{"name":"interferon-gamma secretion","type":"narrow"},{"name":"type II IFN production","type":"exact"}],"termid":"GO:0032609"}


id: SO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of synthetic nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_oligo","synonyms":[{"name":"synthetic oligo","type":"exact"}],"termid":"SO:0001247"}


id: PBO:0088447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Cki1","termid":"PBO:0088447"}


id: PBO:0091825
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae KIN28","termid":"PBO:0091825"}


id: PBO:0072268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 6","termid":"PBO:0072268"}


id: GO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed cell death","secondary_identifiers":["GO:0043070"],"synonyms":[{"name":"regulation of non-apoptotic programmed cell death","type":"narrow"}],"termid":"GO:0043067"}


id: GO:1900083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Sertoli cell proliferation.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Sertoli cell proliferation (obsolete GO:1900083)","synonyms":[{"name":"regulation of Sertoli cell proliferation","type":"exact"}],"termid":"GO:1900083"}


id: GO:0051872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingosine metabolic process","termid":"GO:0006670"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"sphingoid catabolic process","termid":"GO:0046521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"sphingosine catabolic process","synonyms":[{"name":"(4E)-sphing-4-enine catabolic process","type":"exact"},{"name":"(4E)-sphing-4-enine catabolism","type":"exact"},{"name":"sphing-4-enine catabolic process","type":"exact"},{"name":"sphing-4-enine catabolism","type":"exact"}],"termid":"GO:0051872"}


id: PBO:0074488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMYD family member 5","termid":"PBO:0074488"}


id: GO:0033292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of the T-tubule. A T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"muscle cell development","termid":"GO:0055001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"T-tubule organization","synonyms":[{"name":"T-tubule organisation","type":"exact"},{"name":"T-tubule organization and biogenesis","type":"related"},{"name":"transverse tubule organization","type":"exact"}],"termid":"GO:0033292"}


id: GO:0070545
data:
  {"annotated_genes":["SJAG_00882","SJAG_02830","SJAG_02759"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96582,102180,107003],"is_not":false,"summary":null,"term":"GO:0070545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.","definition_xrefs":["PMID:16043514","GOC:ab","PMID:17353269","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00882":null,"SJAG_02759":null,"SJAG_02830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0030684","GO:0005730"],"is_obsolete":false,"name":"PeBoW complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070545","terms_by_termid":{"GO:0070545":null}}


id: SO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of discontinuous sequences.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_collection","synonyms":[{"name":"sequence collection","type":"exact"}],"termid":"SO:0001260"}


id: PBO:0091673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glycerophosphodiester transmembrane transporter","termid":"PBO:0091673"}


id: PBO:0011452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex subunit Vps11 (predicted)","termid":"PBO:0011452"}


id: PBO:0048337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 48","termid":"PBO:0048337"}


id: PBO:0080131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VANGL planar cell polarity protein 1","termid":"PBO:0080131"}


id: PBO:0050059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Z (pseudogene)","termid":"PBO:0050059"}


id: GO:0034308
data:
  {"annotated_genes":["SJAG_01970","SJAG_00240","SJAG_03786","SJAG_03743","SJAG_04282","SJAG_03538","SJAG_02420","SJAG_03822","SJAG_00827","SJAG_01742","SJAG_02047","SJAG_04067","SJAG_05006","SJAG_02421","SJAG_00381","SJAG_03362","SJAG_04866","SJAG_03370","SJAG_01414","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[110797,110798,84752,94915,94916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[92775],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[85270,109879],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[112200,90490,103567,95701,109792,109786,110197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[65415,58517,95703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[95704,106647,106648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_00381":null,"SJAG_00827":null,"SJAG_01414":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03370":null,"SJAG_03538":null,"SJAG_03743":null,"SJAG_03786":null,"SJAG_03822":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"primary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"monohydric alcohol metabolic process","type":"exact"},{"name":"primary alcohol metabolism","type":"exact"}],"termid":"GO:0034308","terms_by_termid":{"GO:0006068":null,"GO:0006772":null,"GO:0009228":null,"GO:0019655":null,"GO:0036172":null,"GO:0090180":null,"GO:2001172":null}}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["GOC:go_curators","Pfam:PF00017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: GO:0098505
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91293],"is_not":false,"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:11349150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"G-rich strand telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098505","terms_by_termid":{"GO:0098505":null}}


id: GO:0034640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion by attachment to a microtubule, followed by elongation of the microtubule by tubulin polymerization.","definition_xrefs":["PMID:12972644","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitochondrion localization, microtubule-mediated","termid":"GO:0034643"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of mitochondrion localization by microtubule attachment","synonyms":[{"name":"establishment of mitochondrion localisation by microtubule attachment","type":"exact"},{"name":"mitochondrial localization by microtubule attachment","type":"exact"},{"name":"mitochondrial migration by microtubule attachment","type":"exact"},{"name":"mitochondrion migration by microtubule attachment","type":"exact"}],"termid":"GO:0034640"}


id: PBO:0039631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyloxyacyl hydrolase","termid":"PBO:0039631"}


id: PBO:0055282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2709","termid":"PBO:0055282"}


id: GO:0016763
data:
  {"annotated_genes":["SJAG_04713","SJAG_04709","SJAG_01859","SJAG_00683","SJAG_03775","SJAG_01974","SJAG_06634","SJAG_03167","SJAG_05228","SJAG_01359","SJAG_01661","SJAG_04747","SJAG_00694","SJAG_04354","SJAG_03881","SJAG_06284","SJAG_03708","SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89745,89967,103570],"is_not":false,"summary":null,"term":"GO:0016763"},{"annotations":[89743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003999"},{"annotations":[94005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004044"},{"annotations":[100568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004048"},{"annotations":[90949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003879"},{"annotations":[89965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052657"},{"annotations":[89966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004422"},{"annotations":[106612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000107"},{"annotations":[112287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050144"},{"annotations":[108111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004588"},{"annotations":[87286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004731"},{"annotations":[86005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"},{"annotations":[93228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043399"},{"annotations":[91998,85908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008479"},{"annotations":[84701,88173,83717,111100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004845"},{"annotations":[89968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_00694":null,"SJAG_00827":null,"SJAG_01359":null,"SJAG_01661":null,"SJAG_01859":null,"SJAG_01974":null,"SJAG_03167":null,"SJAG_03708":null,"SJAG_03775":null,"SJAG_03881":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04747":null,"SJAG_05228":null,"SJAG_06284":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pentosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-112265","Reactome:R-HSA-112266","EC:2.4.2.-"],"synonyms":[{"name":"transferase activity, transferring pentosyl groups","type":"exact"}],"termid":"GO:0016763","terms_by_termid":{"GO:0000107":null,"GO:0000310":null,"GO:0003879":null,"GO:0003999":null,"GO:0004044":null,"GO:0004048":null,"GO:0004422":null,"GO:0004588":null,"GO:0004731":null,"GO:0004845":null,"GO:0008479":null,"GO:0016763":null,"GO:0017061":null,"GO:0043399":null,"GO:0050144":null,"GO:0052657":null}}


id: GO:2000543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"positive regulation of embryonic development","termid":"GO:0040019"},{"relation_name":"positively_regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastrulation","termid":"GO:2000543"}


id: PomGeneEx:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at a higher level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level increased","synonyms":[{"name":"increased protein level","type":"exact"},{"name":"protein expression increased","type":"exact"}],"termid":"PomGeneEx:0000018"}


id: GO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division as part of an immune response.","definition_xrefs":["PMID:15032583","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell proliferation","termid":"GO:0001787"},{"relation_name":"is_a","term_name":"natural killer cell activation involved in immune response","termid":"GO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation involved in immune response","synonyms":[{"name":"NK cell proliferation during immune response","type":"related"},{"name":"natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0002324"}


id: PBO:0053102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 1","termid":"PBO:0053102"}


id: PBO:0079406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8B","termid":"PBO:0079406"}


id: PBO:0070118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 32 pseudogene","termid":"PBO:0070118"}


id: PBO:0053729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 943","termid":"PBO:0053729"}


id: PBO:0028233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_homocysteine_level","termid":"PBO:0028233"}


id: GO:0014918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which pressure natriuresis increases rate of natriuresis.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of natriuresis by pressure natriuresis (obsolete GO:0014918)","synonyms":[{"name":"positive regulation of natriuresis by pressure natriuresis","type":"exact"}],"termid":"GO:0014918"}


id: FYPO:0007486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:27889481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0001985","FYPO:0000120","FYPO:0000054"],"is_obsolete":false,"name":"monopolar spindle during meiosis II","synonyms":[{"name":"V-shaped spindle during meiosis II","type":"related"},{"name":"fan-shaped spindle during meiosis II","type":"exact"},{"name":"monopolar spindle during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007486"}


id: GO:1900627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"negatively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of arugosin biosynthetic process","synonyms":[{"name":"down regulation of arugosin anabolism","type":"exact"},{"name":"down regulation of arugosin biosynthesis","type":"exact"},{"name":"down regulation of arugosin biosynthetic process","type":"exact"},{"name":"down regulation of arugosin formation","type":"exact"},{"name":"down regulation of arugosin synthesis","type":"exact"},{"name":"down-regulation of arugosin anabolism","type":"exact"},{"name":"down-regulation of arugosin biosynthesis","type":"exact"},{"name":"down-regulation of arugosin biosynthetic process","type":"exact"},{"name":"down-regulation of arugosin formation","type":"exact"},{"name":"down-regulation of arugosin synthesis","type":"exact"},{"name":"downregulation of arugosin anabolism","type":"exact"},{"name":"downregulation of arugosin biosynthesis","type":"exact"},{"name":"downregulation of arugosin biosynthetic process","type":"exact"},{"name":"downregulation of arugosin formation","type":"exact"},{"name":"downregulation of arugosin synthesis","type":"exact"},{"name":"inhibition of arugosin anabolism","type":"exact"},{"name":"inhibition of arugosin biosynthesis","type":"exact"},{"name":"inhibition of arugosin biosynthetic process","type":"narrow"},{"name":"inhibition of arugosin formation","type":"exact"},{"name":"inhibition of arugosin synthesis","type":"exact"},{"name":"negative regulation of arugosin anabolism","type":"exact"},{"name":"negative regulation of arugosin biosynthesis","type":"exact"},{"name":"negative regulation of arugosin formation","type":"exact"},{"name":"negative regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900627"}


id: PBO:0043376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 6","termid":"PBO:0043376"}


id: PR:O94319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SEC13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03972","PANTHER:PTHR11024:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.15","secondary_identifiers":["UniProtKB:O94319"],"synonyms":[{"name":"Spom972h-SEC13","type":"exact"}],"termid":"PR:O94319"}


id: PBO:0031146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_polysaccharide_level","termid":"PBO:0031146"}


id: FYECO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000164 anti-tubulin antibodies added (obsolete FYECO:0000164)","synonyms":[{"name":"anti-tubulin antibody added","type":"exact"}],"termid":"FYECO:0000164"}


id: PR:Q9UTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyridoxine-5'-phosphate oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10851:SF0","OMA:SCHPO01911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.02","secondary_identifiers":["UniProtKB:Q9UTQ1"],"synonyms":[{"name":"PNP/PMP oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PNPOx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNPO","type":"exact"}],"termid":"PR:Q9UTQ1"}


id: PBO:0075688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRC kinase signaling inhibitor 1","termid":"PBO:0075688"}


id: GO:0102753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + chlorophyllide b(1-) + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate = geranylgeranyl-chlorophyll b + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:2.5.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7673"],"termid":"GO:0102753"}


id: GO:1902271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to D3 vitamins.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:9127467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D binding","termid":"GO:0005499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"D3 vitamins binding","termid":"GO:1902271"}


id: PBO:0055828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 3","termid":"PBO:0055828"}


id: GO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of B cell deletion","termid":"GO:0002869"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"positively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral B cell deletion","synonyms":[{"name":"activation of peripheral B cell deletion","type":"narrow"},{"name":"stimulation of peripheral B cell deletion","type":"narrow"},{"name":"up regulation of peripheral B cell deletion","type":"exact"},{"name":"up-regulation of peripheral B cell deletion","type":"exact"},{"name":"upregulation of peripheral B cell deletion","type":"exact"}],"termid":"GO:0002910"}


id: PBO:0085321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in phosphatidylinositol 4,5-bisphosphate homeostasis and in endocytosis; null mutation confers cold-tolerant growth","termid":"PBO:0085321"}


id: GO:0032722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"positively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine production","secondary_identifiers":["GO:0090197","GO:0045080"],"synonyms":[{"name":"activation of chemokine production","type":"narrow"},{"name":"positive regulation of chemokine biosynthetic process","type":"narrow"},{"name":"positive regulation of chemokine secretion","type":"narrow"},{"name":"stimulation of chemokine production","type":"narrow"},{"name":"up regulation of chemokine production","type":"exact"},{"name":"up-regulation of chemokine production","type":"exact"},{"name":"upregulation of chemokine production","type":"exact"}],"termid":"GO:0032722"}


id: GO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle motor activity (obsolete GO:0003776)","synonyms":[{"name":"muscle motor activity","type":"exact"}],"termid":"GO:0003776"}


id: GO:0006545
data:
  {"annotated_genes":["SJAG_01766","SJAG_02450","SJAG_03914"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90402],"is_not":false,"summary":null,"term":"GO:0006545"},{"annotations":[87505,90683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"serine family amino acid biosynthetic process","termid":"GO:0009070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_02450":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glycine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYCINE-SYN2-PWY"],"synonyms":[{"name":"glycine anabolism","type":"exact"},{"name":"glycine biosynthesis","type":"exact"},{"name":"glycine formation","type":"exact"},{"name":"glycine synthesis","type":"exact"}],"termid":"GO:0006545","terms_by_termid":{"GO:0006545":null,"GO:0019264":null}}


id: GO:0008453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine.","definition_xrefs":["EC:2.6.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"alanine-glyoxylate transaminase activity","secondary_identifiers":["MetaCyc:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN","RHEA:24248","Reactome:R-HSA-904864","Reactome:R-HSA-389684"],"synonyms":[{"name":"AGT activity","type":"related"},{"name":"L-alanine-glycine transaminase activity","type":"related"},{"name":"L-alanine:glyoxylate aminotransferase activity","type":"related"},{"name":"alanine--glyoxylate aminotransferase activity","type":"related"},{"name":"alanine-glyoxylate aminotransferase activity","type":"exact"},{"name":"alanine-glyoxylic aminotransferase activity","type":"related"}],"termid":"GO:0008453"}


id: PBO:0071606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 24","termid":"PBO:0071606"}


id: PBO:0070498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 33","termid":"PBO:0070498"}


id: GO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lysophosphatidic acid (LPA), a phospholipid derivative that acts as a potent mitogen due to its activation of high-affinity G protein-coupled receptors.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"lysophosphatidic acid binding","synonyms":[{"name":"LPA binding","type":"exact"}],"termid":"GO:0035727"}


id: PBO:0016581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase gamma","termid":"PBO:0016581"}


id: SO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_3_amino_3_carboxypropyl_uridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_three_amino_three_carboxypropyl_uridine","secondary_identifiers":["RNAMOD:061"],"synonyms":[{"name":"3-(3-amino-3-carboxypropyl)uridine","type":"exact"},{"name":"acp3U","type":"exact"}],"termid":"SO:0001353"}


id: PBO:0060341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIA","termid":"PBO:0060341"}


id: PBO:0073616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SID1 transmembrane family member 2","termid":"PBO:0073616"}


id: GO:0071901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}


id: GO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-induced defense-related programmed cell death","synonyms":[{"name":"host programmed cell death induced by symbiont","type":"exact"},{"name":"programmed cell death induced by symbiont","type":"exact"}],"termid":"GO:0034050"}


id: PBO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member A","termid":"PBO:0047147"}


id: GO:0016212
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95570],"is_not":false,"summary":null,"term":"GO:0016212"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate.","definition_xrefs":["EC:2.6.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kynurenine aminotransferase activity","termid":"GO:0036137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"kynurenine-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-901097","Reactome:R-HSA-893596","RHEA:20964","MetaCyc:2.6.1.7-RXN","Reactome:R-HSA-893583"],"synonyms":[{"name":"L-kynurenine aminotransferase activity","type":"related"},{"name":"L-kynurenine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"kynurenine 2-oxoglutarate transaminase activity","type":"related"},{"name":"kynurenine aminotransferase activity","type":"broad"},{"name":"kynurenine transaminase (cyclizing)","type":"related"},{"name":"kynurenine--oxoglutarate aminotransferase activity","type":"related"},{"name":"kynurenine-oxoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0016212","terms_by_termid":{"GO:0016212":null}}


id: PBO:0066966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 268","termid":"PBO:0066966"}


id: PBO:0069815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1101, pseudogene","termid":"PBO:0069815"}


id: GO:1990663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + fumarate = orotate + succinate.","definition_xrefs":["PMID:1409592","RHEA:30059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (fumarate) activity","secondary_identifiers":["EC:1.3.98.1"],"termid":"GO:1990663"}


id: PBO:0082387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 7 subunit of the 20S proteasome","termid":"PBO:0082387"}


id: GO:0043282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pharyngeal muscle over time, from its formation to the mature structure. A pharyngeal muscle is any muscle that forms part of the pharynx.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"part_of","term_name":"chordate pharynx development","termid":"GO:0160093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate pharyngeal muscle development","termid":"GO:0043282"}


id: GO:0032009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle as initially formed upon the ingestion of particulate material by phagocytosis.","definition_xrefs":["GOC:mah","PMID:12388753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"early phagosome","synonyms":[{"name":"early phagocytic vesicle","type":"exact"}],"termid":"GO:0032009"}


id: FYPO:0006708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during glucose starvation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein phosphorylation during glucose deprivation","type":"exact"},{"name":"protein phosphorylation abolished during glucose starvation","type":"exact"}],"termid":"FYPO:0006708"}


id: GO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone.","definition_xrefs":["RHEA:12364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydronicotinamide riboside quinone reductase activity","secondary_identifiers":["MetaCyc:1.10.99.2-RXN","Reactome:R-HSA-8936519","EC:1.10.5.1"],"synonyms":[{"name":"N-ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"related"},{"name":"NQO2","type":"related"},{"name":"NQO2 activity","type":"related"},{"name":"NRH:quinone oxidoreductase 2 activity","type":"narrow"},{"name":"QR2 activity","type":"related"},{"name":"quinone reductase 2 activity","type":"related"},{"name":"ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"exact"}],"termid":"GO:0001512"}


id: PBO:0085136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for export of tRNAs from the nucleus; also copurifies with the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA","termid":"PBO:0085136"}


id: GO:0006462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein complex assembly, multichaperone pathway (obsolete GO:0006462)","synonyms":[{"name":"protein complex assembly, multichaperone pathway","type":"exact"}],"termid":"GO:0006462"}


id: GO:0048572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that falls short of a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 hours minus the critical day length.","definition_xrefs":["ISBN:0582015952","ISBN:0697037754","GOC:jid","ISBN:0709408862","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-day photoperiodism","synonyms":[{"name":"long-night photoperiodism","type":"exact"},{"name":"response to long-night","type":"exact"},{"name":"response to short-day","type":"exact"},{"name":"response to short-day photoperiod","type":"related"}],"termid":"GO:0048572"}


id: PBO:0085806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; down-regulated at low calcium levels; mCherry fusion protein localizes to the vacuole","termid":"PBO:0085806"}


id: PBO:0049148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 5","termid":"PBO:0049148"}


id: PBO:0035720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0035720"}


id: FYPO:0007070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding to a nuclear localization sequence (NLS) in a protein by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished NLS binding","synonyms":[{"name":"NLS binding abolished","type":"exact"},{"name":"abolished nuclear localisation sequence binding","type":"exact"},{"name":"abolished nuclear localization sequence binding","type":"exact"},{"name":"abolished nuclear localization signal binding","type":"exact"}],"termid":"FYPO:0007070"}


id: GO:0102181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-formyl-stigmasta-7,24(241)-dien-3beta-ol + NADH + O2 = 4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4alpha-formyl-stigmasta-7,24(241)-dien-3beta-ol-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11937","RHEA:59040"],"termid":"GO:0102181"}


id: GO:0019911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of myelin sheath","termid":"GO:0019911"}


id: PBO:0072633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich protein 1","termid":"PBO:0072633"}


id: GO:0071922
data:
  {"annotated_genes":["SJAG_03591","SJAG_00823","SJAG_01716","SJAG_05978","SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87939,102439,102534,111512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[103597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah","GOC:lb","PMID:17113138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromatin","termid":"GO:1905634"},{"relation_name":"regulates","term_name":"cohesin loading","termid":"GO:0071921"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cohesin association with chromatin","type":"exact"},{"name":"regulation of cohesin localisation to chromatin","type":"exact"},{"name":"regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:0071922","terms_by_termid":{"GO:1905406":null,"GO:1905412":null}}


id: PR:G2TRM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.19","synonyms":[{"name":"Spom972h-SPAC11D3.19","type":"exact"}],"termid":"PR:G2TRM3"}


id: PATO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000886 absolute litter size value (obsolete PATO:0000886)","termid":"PATO:0000886"}


id: GO:0106385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a dIMP from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:8692979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dIMP salvage","termid":"GO:0106385"}


id: GO:0009380
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein complexes formed by the UvrABC excinuclease system, which carries out nucleotide excision repair. Three different complexes are formed by the 3 proteins as they proceed through the excision repair process. First a complex consisting of two A subunits and two B subunits bind DNA and unwind it around the damaged site. Then, the A subunits disassociate leaving behind a stable complex between B subunits and DNA. Now, subunit C binds to this B+DNA complex and causes subunit B to nick the DNA on one side of the complex while subunit C nicks the DNA on the other side of the complex. DNA polymerase I and DNA ligase can then repair the resulting gap.","definition_xrefs":["GOC:mlg","GOC:mah","PMID:15192705","PMID:12145219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"excinuclease repair complex","synonyms":[{"name":"UvrABC excinuclease complex","type":"exact"},{"name":"excinuclease ABC complex","type":"exact"}],"termid":"GO:0009380"}


id: _global:regulates_o_occurs_in
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that holds between a regulatory process and the entity which the regulated biological process or molecular function occurs in.","definition_xrefs":["GOC:cjm","GOC:mtg_berkeley_2012_08_27","GOC:dph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_process_that_occurs_in","secondary_identifiers":["GOREL:0001004"],"synonyms":[{"name":"regulates_o_occurs_in","type":"exact"}],"termid":"_global:regulates_o_occurs_in"}


id: PBO:0028137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_wall_invagination_into_cytoplasm","termid":"PBO:0028137"}


id: PBO:0075997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP3 antisense RNA 1","termid":"PBO:0075997"}


id: PR:Q9HDU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.08 gene.","definition_xrefs":["UniProtKB:Q9HDU7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0643 protein PB2B2.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.08","synonyms":[{"name":"Spom972h-SPBPB2B2.08","type":"exact"}],"termid":"PR:Q9HDU7"}


id: PBO:0080963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 6","termid":"PBO:0080963"}


id: PBO:0111810
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family","termid":"PBO:0111810"}


id: PBO:0058494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5689","termid":"PBO:0058494"}


id: FYPO:0004755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the minus ends of microtubules is abnormal.","definition_xrefs":["PomBase:mah","PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to microtubule minus-end","synonyms":[{"name":"abnormal protein localisation to microtubule minus-end","type":"exact"},{"name":"abnormal protein localization to microtubule minus end","type":"exact"},{"name":"abnormal protein localization to microtubule minus-end during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to microtubule minus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0004755"}


id: GO:0032932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of astral microtubules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule depolymerization","termid":"GO:0007026"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"negatively_regulates","term_name":"astral microtubule depolymerization","termid":"GO:0060172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"negative regulation of astral microtubule depolymerization","synonyms":[{"name":"astral microtubule stabilization","type":"exact"}],"termid":"GO:0032932"}


id: GO:1990636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A life cycle stage during which the reproductive capacity and fitness of an organism declines.","definition_xrefs":["PMID:24914937","PMID:25523082","PMID:27353257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive senescence","synonyms":[{"name":"ovarian senescence","type":"narrow"}],"termid":"GO:1990636"}


id: FYPO:0000772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which perforations or gaps (other than nuclear pores) are present in the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"perforated nuclear envelope","synonyms":[{"name":"disrupted nuclear envelope","type":"related"},{"name":"disrupted nuclear membrane","type":"related"},{"name":"gapped nuclear envelope","type":"exact"},{"name":"perforated nuclear envelope during mitotic cell cycle","type":"related"},{"name":"perforated nuclear envelope during vegetative growth","type":"exact"},{"name":"perforated nuclear membrane","type":"related"},{"name":"permeabilized nucleus during mitosis","type":"exact"}],"termid":"FYPO:0000772"}


id: PBO:0091818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aberrant Microtubules when Overexpressed","termid":"PBO:0091818"}


id: PR:O42964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iws1 gene.","definition_xrefs":["UniProtKB:O42964","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor iws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.16","synonyms":[{"name":"Spom972h-iws1","type":"exact"}],"termid":"PR:O42964"}


id: GO:0034931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-hydroxypyrene + XCH3 = 1-methoxypyrene + HX.","definition_xrefs":["UM-BBD_reactionID:r0953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-hydroxypyrene methyltransferase activity","termid":"GO:0034931"}


id: PBO:0070927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 35","termid":"PBO:0070927"}


id: GO:0160037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of postsynaptic density assembly.","definition_xrefs":["PMID:17626212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic density assembly","termid":"GO:0099151"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of postsynaptic density organization","termid":"GO:1905875"},{"relation_name":"negatively_regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of postsynaptic density assembly","termid":"GO:0160037"}


id: PBO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 1","termid":"PBO:0080064"}


id: GO:1905312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rl","PMID:17628518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"},{"relation_name":"positively_regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","synonyms":[{"name":"activation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1905312"}


id: PBO:0091602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid10","termid":"PBO:0091602"}


id: PBO:0036193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromeric_chromatin,_with_protein_mislocalized_to_nucleoplasm","termid":"PBO:0036193"}


id: PBO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein (predicted)","termid":"PBO:0002556"}


id: PBO:0068863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 103, pseudogene","termid":"PBO:0068863"}


id: PBO:0089235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial nuclease Lcl3, implicated in DNA repair","termid":"PBO:0089235"}


id: SO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of bacterial chromosome replication.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriC","synonyms":[{"name":"origin of bacterial chromosome replication","type":"exact"}],"termid":"SO:0000953"}


id: PBO:0027120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_azygotic_meiosis_I","termid":"PBO:0027120"}


id: MOD:01516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 144.099-144.106 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"}


id: PBO:0083078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dipeptidyl-peptidase III; cleaves dipeptides from the amino terminus of target proteins; highly active on synthetic substrate Arg-Arg-2-naphthylamide; mammalian ortholog may be a biomarker for some cancers","termid":"PBO:0083078"}


id: PBO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med12","termid":"PBO:0018245"}


id: GO:0042340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"keratan sulfate metabolic process","termid":"GO:0042339"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"keratan sulfate catabolic process","synonyms":[{"name":"keratan sulfate breakdown","type":"exact"},{"name":"keratan sulfate catabolism","type":"exact"},{"name":"keratan sulfate degradation","type":"exact"},{"name":"keratan sulphate catabolic process","type":"exact"},{"name":"keratan sulphate catabolism","type":"exact"}],"termid":"GO:0042340"}


id: GO:0000922
data:
  {"annotated_genes":["SJAG_02320","SJAG_00918","SJAG_03073","SJAG_01464","SJAG_03915","SJAG_01546","SJAG_01805","SJAG_04745","SJAG_01613","SJAG_02241","SJAG_05196","SJAG_02624","SJAG_02761","SJAG_01224"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103279,114966,87490,96071,89993,98995,92959,95393,90959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090619"},{"annotations":[95400,103689,94810,114274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990537"},{"annotations":[114275,96554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097431"},{"annotations":[97606,95402,90965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005827"}]},"cv_name":"cellular_component","definition":"Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030615"],"termid":"GO:0000922","terms_by_termid":{"GO:0005827":null,"GO:0090619":null,"GO:0097431":null,"GO:1990537":null}}


id: GO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"}


id: PBO:0075392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp5 transcription factor","termid":"PBO:0075392"}


id: PBO:0109607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A15","termid":"PBO:0109607"}


id: GO:1904912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:26586433","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"positively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of RNA localization to telomere","synonyms":[{"name":"activation of establishment of RNA localisation to telomere","type":"narrow"},{"name":"activation of establishment of RNA localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localization to telomere","type":"exact"}],"termid":"GO:1904912"}


id: PBO:0049287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 6, pseudogene","termid":"PBO:0049287"}


id: GO:0035596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a methylthioether group (-SCH3) to a nucleic acid or protein acceptor.","definition_xrefs":["GOC:jh2","PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"methylthiotransferase activity","synonyms":[{"name":"MTTase","type":"exact"}],"termid":"GO:0035596"}


id: PBO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 11, pseudogene","termid":"PBO:0047720"}


id: PBO:0086164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for rRNA maturation and ribosomal subunit biogenesis; required for 18S rRNA maturation; also required for small ribosomal subunit biogenesis; cosediments with pre-ribosomal particles; mutation decreases efficiency of +1 Ty1 frameshifting and transposition, and affects budding pattern","termid":"PBO:0086164"}


id: PBO:0085414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein","termid":"PBO:0085414"}


id: PBO:0057765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2054","termid":"PBO:0057765"}


id: GO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.","direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dipyrrin metabolic process","synonyms":[{"name":"dipyrrin metabolism","type":"exact"}],"termid":"GO:0046453"}


id: PBO:0058850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8079","termid":"PBO:0058850"}


id: GO:0006990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes whose promoters contain a specific sequence elements such as the unfolded protein response element (UPRE; consensus CAGCGTG) or the ER stress-response element (ERSE; CCAAN(N)9CCACG), as a result of signaling via the unfolded protein response.","definition_xrefs":["GOC:dph","PMID:12042763","GOC:mah","GOC:tb","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response (obsolete GO:0006990)","synonyms":[{"name":"positive regulation of transcription of target genes involved in unfolded protein response","type":"exact"},{"name":"unfolded protein response, activation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, positive regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, stimulation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, target gene transcriptional activation","type":"broad"},{"name":"unfolded protein response, up regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, up-regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, upregulation of target gene transcription","type":"exact"}],"termid":"GO:0006990"}


id: PBO:0042524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2 pseudogene 2","termid":"PBO:0042524"}


id: PBO:0078502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 regulated inhibitor of apoptosis 1","termid":"PBO:0078502"}


id: PBO:0081788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 716","termid":"PBO:0081788"}


id: GO:0060377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mast cell differentiation, the process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte differentiation","termid":"GO:0002762"},{"relation_name":"is_a","term_name":"regulation of mast cell differentiation","termid":"GO:0060375"},{"relation_name":"negatively_regulates","term_name":"mast cell differentiation","termid":"GO:0060374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell differentiation","termid":"GO:0060377"}


id: PBO:0063162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 7","termid":"PBO:0063162"}


id: GO:1903475
data:
  {"annotated_genes":["SJAG_03596","SJAG_01805","SJAG_02431","SJAG_02700","SJAG_04597","SJAG_00268","SJAG_01894","SJAG_01143","SJAG_01732","SJAG_02592","SJAG_03025","SJAG_00082","SJAG_04982","SJAG_04498","SJAG_00228","SJAG_00938","SJAG_01943","SJAG_04077","SJAG_00700","SJAG_03703","SJAG_04887","SJAG_00279","SJAG_03045","SJAG_04930","SJAG_04703","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73905,84509,88530,88744,88790,91487,93845,93921,94119,94230,95087,97445,98607,98747,104328,108066,108500,113204,114025,114602,114781,115246],"is_not":false,"summary":null,"term":"GO:1903475"},{"annotations":[94231],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98552],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90610,86227],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[90576,115751,90016],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any actomyosin contractile ring assembly that is involved in mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"},{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","termid":"GO:1902407"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0030036","GO:0007010","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1903475","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: PBO:0056149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mab-21 like 4","termid":"PBO:0056149"}


id: PBO:0058051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4272","termid":"PBO:0058051"}


id: GO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.","definition_xrefs":["PMID:12588810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brown fat cell differentiation","synonyms":[{"name":"brown adipocyte cell differentiation","type":"exact"},{"name":"brown adipocyte differentiation","type":"exact"}],"termid":"GO:0050873"}


id: GO:0030760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + pyridine = N-methylpyridinium + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.87","RHEA:16893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"pyridine N-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-175987","MetaCyc:PYRIDINE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R02862"],"synonyms":[{"name":"S-adenosyl-L-methionine:pyridine N-methyltransferase activity","type":"related"},{"name":"pyridine methyltransferase activity","type":"related"}],"termid":"GO:0030760"}


id: PBO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF654 family protein","termid":"PBO:0002144"}


id: GO:0032231
data:
  {"annotated_genes":["SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103806],"is_not":false,"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin cable assembly","type":"exact"},{"name":"regulation of actin filament bundle formation","type":"related"}],"termid":"GO:0032231","terms_by_termid":{"GO:0032231":null}}


id: GO:1904476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of small GTPase binding.","definition_xrefs":["GOC:TermGenie","PMID:15798216","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of small GTPase binding","termid":"GO:1904475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of small GTPase binding","synonyms":[{"name":"down regulation of small GTPase binding","type":"exact"},{"name":"down-regulation of Ras GTPase binding","type":"exact"},{"name":"downregulation of small GTPase binding","type":"exact"},{"name":"inhibition of small GTPase binding","type":"exact"},{"name":"negative regulation of Ras GTPase binding","type":"narrow"}],"termid":"GO:1904476"}


id: GO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric distal convoluted tubule over time, from its formation to the mature structure. The metanephric distal convoluted tubule is the first segment of the metanephric nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal convoluted tubule development","termid":"GO:0072025"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}


id: PBO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase (predicted)","termid":"PBO:0000730"}


id: PBO:0078091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 8","termid":"PBO:0078091"}


id: PBO:0091340
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulated by Different Signals","termid":"PBO:0091340"}


id: PBO:0049376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 6","termid":"PBO:0049376"}


id: PBO:0081706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 626","termid":"PBO:0081706"}


id: PBO:0073312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A pseudogene 1","termid":"PBO:0073312"}


id: GO:1904337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["GO_REF:0000058","PMID:16303610","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ductus arteriosus closure","synonyms":[{"name":"activation of ductus arteriosus closure","type":"narrow"},{"name":"up regulation of ductus arteriosus closure","type":"exact"},{"name":"up-regulation of ductus arteriosus closure","type":"exact"},{"name":"upregulation of ductus arteriosus closure","type":"exact"}],"termid":"GO:1904337"}


id: PBO:0027538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_S-phase_DNA_damage_checkpoint_signaling","termid":"PBO:0027538"}


id: GO:0030418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.","definition_xrefs":["GOC:mah","PMID:10069850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"nicotianamine metabolic process","termid":"GO:0030417"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotianamine biosynthetic process","synonyms":[{"name":"nicotianamine anabolism","type":"exact"},{"name":"nicotianamine biosynthesis","type":"exact"},{"name":"nicotianamine formation","type":"exact"},{"name":"nicotianamine synthesis","type":"exact"}],"termid":"GO:0030418"}


id: GO:0045956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"is_a","term_name":"positive regulation of regulated secretory pathway","termid":"GO:1903307"},{"relation_name":"positively_regulates","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion-dependent exocytosis","synonyms":[{"name":"activation of calcium ion-dependent exocytosis","type":"narrow"},{"name":"stimulation of calcium ion-dependent exocytosis","type":"narrow"},{"name":"up regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"up-regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"upregulation of calcium ion-dependent exocytosis","type":"exact"}],"termid":"GO:0045956"}


id: PBO:0087645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GPI:protein transamidase complex; removes the GPI-anchoring signal and attaches GPI (glycosylphosphatidylinositol) to proteins in the ER; human homolog GPAA1 can complement growth defects of yeast thermosensitive mutant at restrictive temperature","termid":"PBO:0087645"}


id: GO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a H2A-H2B histone dimer from a nucleosome within chromatin.","definition_xrefs":["PMID:17496903","GOC:krc","PMID:15525516","PMID:21807128"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-H2B dimer displacement (obsolete GO:0001208)","termid":"GO:0001208"}


id: _global:results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","secondary_identifiers":["GOREL:0001021","RO:0002356"],"termid":"_global:results_in_specification_of"}


id: PBO:0063101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD6G antisense RNA 1","termid":"PBO:0063101"}


id: FYPO:0001321
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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growth","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_00028","SJAG_03689","SJAG_03940","SJAG_01906","SJAG_02819","SJAG_01794","SJAG_00409","SJAG_03453","SJAG_01956","SJAG_04332","SJAG_02392","SJAG_00266","SJAG_04522","SJAG_03351","SJAG_03048","SJAG_01745","SJAG_04697","SJAG_00514","SJAG_02592","SJAG_03581","SJAG_04703","SJAG_02013","SJAG_02763","SJAG_04280","SJAG_04464","SJAG_03250","SJAG_01143","SJAG_03449","SJAG_00118","SJAG_04312","SJAG_04551","SJAG_01834","SJAG_00426"],"single_locus_genotype_uniquenames":["ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","dcr1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","lem2delta","atf1delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","ras1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pka1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","pom152delta","sty1delta","gpd1delta","nem2delta","rga4delta","pmk1delta","mid2delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","for3delta","rga6delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","efc25delta","pyp1delta","gms1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","scd1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cellular physical object quality phenotype during vegetative growth","type":"exact"},{"name":"cellular physical quality phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular physical object quality phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001321","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000356":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001489":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001877":null,"FYPO:0002026":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003751":null,"FYPO:0003779":null,"FYPO:0003780":null,"FYPO:0003976":null,"FYPO:0004205":null,"FYPO:0004295":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0006433":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0033126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GTP catabolic process (obsolete GO:0033126)","synonyms":[{"name":"positive regulation of GTP breakdown","type":"exact"},{"name":"positive regulation of GTP catabolism","type":"exact"},{"name":"positive regulation of GTP degradation","type":"exact"}],"termid":"GO:0033126"}


id: PBO:0058958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 2","termid":"PBO:0058958"}


id: PR:O60066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alkylated DNA repair protein alkB homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR16557:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate-dependent dioxygenase abh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.04c","secondary_identifiers":["UniProtKB:O60066"],"synonyms":[{"name":"SPBC13G1.04c","type":"related"},{"name":"Spom972h-ALKBH1","type":"exact"},{"name":"alkylated DNA repair protein alkB homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60066"}


id: PBO:0053365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 276","termid":"PBO:0053365"}


id: PBO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA","termid":"PBO:0001874"}


id: PBO:0030761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_selenite_ion","termid":"PBO:0030761"}


id: PBO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr3 (predicted)","termid":"PBO:0000487"}


id: GO:0048930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in the posterior lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell migration","termid":"GO:0048896"},{"relation_name":"part_of","term_name":"posterior lateral line nerve development","termid":"GO:0048918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration in posterior lateral line nerve","termid":"GO:0048930"}


id: PBO:0057382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ax","termid":"PBO:0057382"}


id: GO:0009503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid membrane complex of chlorophylls a and b together with chlorophyll a-b binding proteins. In addition, LHCs contain a number of other proteins, the function of which is speculative, together with accessory pigments. The LHCs capture and transfer energy to photosystems I and II. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light-harvesting complex","termid":"GO:0030076"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"thylakoid light-harvesting complex","termid":"GO:0009503"}


id: GO:0009709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoid indole alkaloids, compounds formed from the condensation of tryptamine (derived from tryptophan) and secologanin (derived from geranyl pyrophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"terpenoid indole alkaloid metabolic process","termid":"GO:0046447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"terpenoid indole alkaloid biosynthetic process","synonyms":[{"name":"terpenoid indole alkaloid anabolism","type":"exact"},{"name":"terpenoid indole alkaloid biosynthesis","type":"exact"},{"name":"terpenoid indole alkaloid formation","type":"exact"},{"name":"terpenoid indole alkaloid synthesis","type":"exact"}],"termid":"GO:0009709"}


id: MOD:00620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:7856876","Unimod:301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine monobromobimane derivative","synonyms":[{"name":"Bromobimane","type":"related"},{"name":"Monobromobimane derivative","type":"related"}],"termid":"MOD:00620"}


id: PBO:0079193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 22, pseudogene","termid":"PBO:0079193"}


id: GO:0033847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + hydrogen sulfide = L-cysteine + phosphate.","definition_xrefs":["EC:2.5.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-phosphoserine sulfhydrylase activity","secondary_identifiers":["MetaCyc:2.5.1.65-RXN","RHEA:10252"],"synonyms":[{"name":"O-phospho-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase activity","type":"related"},{"name":"O-phosphoserine(thiol)-lyase activity","type":"related"}],"termid":"GO:0033847"}


id: PBO:0055189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2613","termid":"PBO:0055189"}


id: PBO:0075385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp1 transcription factor","termid":"PBO:0075385"}


id: GO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl phosphate + sn-glycerol 3-phosphate = 1-acyl-sn-glycerol 3-phosphate + orthophosphate.","definition_xrefs":["PMID:17308305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acyl-phosphate glycerol-3-phosphate acyltransferase activity","synonyms":[{"name":"acyl-phosphate:glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"acylphosphate glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"acylphosphate:glycerol-3-phosphate acyltransferase activity","type":"exact"}],"termid":"GO:0043772"}


id: PBO:0002704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Hus1","termid":"PBO:0002704"}


id: PBO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1","termid":"PBO:0051088"}


id: GO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex (obsolete GO:0030087)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"exact"}],"termid":"GO:0030087"}


id: PBO:0109385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 16","termid":"PBO:0109385"}


id: PBO:0039732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C3","termid":"PBO:0039732"}


id: GO:0050307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose 6F-phosphate + H2O = sucrose + phosphate.","definition_xrefs":["EC:3.1.3.24","MetaCyc:SUCROSE-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"sucrose-phosphate phosphatase activity","secondary_identifiers":["RHEA:19289","KEGG_REACTION:R06211","KEGG_REACTION:R00805"],"synonyms":[{"name":"sucrose-6F-phosphate phosphohydrolase activity","type":"exact"},{"name":"sucrose-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050307"}


id: PR:O60065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23058:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.03c","secondary_identifiers":["UniProtKB:O60065"],"synonyms":[{"name":"SPBC13G1.03c","type":"related"},{"name":"Spom972h-PEX14","type":"exact"},{"name":"peroxin-14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60065"}


id: PATO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"To bend or hang downwards due to loss of water","direct_ancestors":[{"relation_name":"is_a","term_name":"drooping","termid":"PATO:0002165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wilty","termid":"PATO:0002461"}


id: GO:1902343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltose transport.","definition_xrefs":["PMID:23770568","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltose transport","termid":"GO:1902343"}


id: GO:0071006
data:
  {"annotated_genes":["SJAG_04898","SJAG_01315","SJAG_04783","SJAG_04117","SJAG_01504"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91594,93036,96867,101951,113376],"is_not":false,"summary":null,"term":"GO:0071006"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.","definition_xrefs":["GOC:ab","PMID:19239890","GOC:krc","ISBN:0879695897","ISBN:0879697393","PMID:18322460","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01315":null,"SJAG_01504":null,"SJAG_04117":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U2-type catalytic step 1 spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG catalytic step 1 spliceosome","type":"narrow"},{"name":"U2-type activated spliceosome","type":"exact"},{"name":"major catalytic step 1 spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex B2","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071006","terms_by_termid":{"GO:0071006":null}}


id: GO:0021722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"pons maturation","termid":"GO:0021586"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus maturation","synonyms":[{"name":"superior olive maturation","type":"related"}],"termid":"GO:0021722"}


id: GO:0097114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:BHF","PMID:15620359","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"NMDA glutamate receptor clustering","synonyms":[{"name":"N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"NMDA receptor clustering","type":"exact"}],"termid":"GO:0097114"}


id: PBO:0057059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 143","termid":"PBO:0057059"}


id: PBO:0056847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix Gla protein","termid":"PBO:0056847"}


id: PBO:0077274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM14B divergent transcript","termid":"PBO:0077274"}


id: PBO:0030565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_leucine_level","termid":"PBO:0030565"}


id: PR:O94561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bcp1 gene.","definition_xrefs":["UniProtKB:O94561","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin C1773.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.02c","synonyms":[{"name":"Spom972h-bcp1","type":"exact"},{"name":"nTPx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear thiol peroxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94561"}


id: GO:0018775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxymuconate semialdehyde + H2O = formate + 2-oxopent-4-enoate.","definition_xrefs":["EC:3.7.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"2-hydroxymuconate-semialdehyde hydrolase activity","secondary_identifiers":["RHEA:14549","UM-BBD_enzymeID:e0139","MetaCyc:3.7.1.9-RXN"],"synonyms":[{"name":"2-hydroxymuconate-semialdehyde formylhydrolase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde hydrolase activity","type":"related"},{"name":"HMSH","type":"related"},{"name":"HOD hydrolase activity","type":"related"}],"termid":"GO:0018775"}


id: PBO:0072461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 25","termid":"PBO:0072461"}


id: PBO:0042601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 1","termid":"PBO:0042601"}


id: PBO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 37","termid":"PBO:0050335"}


id: PBO:0041156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 11","termid":"PBO:0041156"}


id: PATO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's cartilage quantities.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cartilaginous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilaginous","termid":"PATO:0001449"}


id: GO:0010253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-rhamnose, a substance composed of rhamnose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["PMID:15134748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-rhamnose metabolic process","termid":"GO:0033478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3261"],"synonyms":[{"name":"UDP-rhamnose anabolism","type":"exact"},{"name":"UDP-rhamnose biosynthesis","type":"exact"},{"name":"UDP-rhamnose formation","type":"exact"},{"name":"UDP-rhamnose synthesis","type":"exact"}],"termid":"GO:0010253"}


id: GO:0090284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:tb","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein glycosylation in Golgi (obsolete GO:0090284)","synonyms":[{"name":"positive regulation of protein amino acid glycosylation in Golgi","type":"exact"}],"termid":"GO:0090284"}


id: GO:1903099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the formation of nucleosomes containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24710126"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CENP-A containing nucleosome assembly (obsolete GO:1903099)","synonyms":[{"name":"activation of CENP-A containing nucleosome assembly at centromere","type":"narrow"},{"name":"activation of CENP-A deposition","type":"related"},{"name":"activation of CENP-A loading","type":"related"},{"name":"activation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"activation of DNA replication-independent nucleosome assembly at centromere","type":"narrow"},{"name":"activation of centromere specific nucleosome exchange","type":"related"},{"name":"activation of centromere-specific histone exchange","type":"narrow"},{"name":"activation of centromere-specific nucleosome assembly","type":"narrow"},{"name":"activation of centromeric DNA replication-independent nucleosome assembly","type":"narrow"},{"name":"positive regulation of CENP-A deposition","type":"related"},{"name":"positive regulation of CENP-A loading","type":"related"},{"name":"positive regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"positive regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"positive regulation of centromere specific nucleosome exchange","type":"related"},{"name":"positive regulation of centromere-specific histone exchange","type":"exact"},{"name":"positive regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"positive regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"up regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"up regulation of CENP-A deposition","type":"related"},{"name":"up regulation of CENP-A loading","type":"related"},{"name":"up regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"up regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"up regulation of centromere specific nucleosome exchange","type":"related"},{"name":"up regulation of centromere-specific histone exchange","type":"exact"},{"name":"up regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"up regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"up-regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"up-regulation of CENP-A deposition","type":"related"},{"name":"up-regulation of CENP-A loading","type":"related"},{"name":"up-regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"up-regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"up-regulation of centromere specific nucleosome exchange","type":"related"},{"name":"up-regulation of centromere-specific histone exchange","type":"exact"},{"name":"up-regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"up-regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"upregulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"upregulation of CENP-A deposition","type":"related"},{"name":"upregulation of CENP-A loading","type":"related"},{"name":"upregulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"upregulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"upregulation of centromere specific nucleosome exchange","type":"related"},{"name":"upregulation of centromere-specific histone exchange","type":"exact"},{"name":"upregulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"upregulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:1903099"}


id: GO:0106431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N6-methyl-(d)ATP + H2O = N6-methyl-(d)AMP + diphosphate + H+.","definition_xrefs":["PMID:32144205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N6-methyl-(d)ATP hydrolase activity","termid":"GO:0106431"}


id: PBO:0082905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine gamma-lyase; catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine; protein abundance increases in response to DNA replication stress","termid":"PBO:0082905"}


id: PBO:0071741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 39","termid":"PBO:0071741"}


id: GO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Development of a photoreceptor, a receptor that responds to light, in the adult Drosophila eye.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adult eye photoreceptor development (sensu Drosophila) (obsolete GO:0001753)","synonyms":[{"name":"adult eye photoreceptor development (sensu Drosophila)","type":"exact"}],"termid":"GO:0001753"}


id: PBO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 3","termid":"PBO:0052047"}


id: GO:2000881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch catabolic process","synonyms":[{"name":"regulation of starch breakdown","type":"exact"},{"name":"regulation of starch catabolism","type":"exact"},{"name":"regulation of starch degradation","type":"exact"}],"termid":"GO:2000881"}


id: _global:position_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"position_of","termid":"_global:position_of"}


id: FYPO:0004820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of DNA replication pause sites in ribosomal DNA at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci at rDNA replication pause sites","synonyms":[{"name":"increased number of Rad22 foci at rDNA replication fork barrier","type":"exact"},{"name":"increased number of Rad22 foci at rDNA replication pause sites","type":"exact"},{"name":"increased number of Rad52 foci at rDNA replication pause sites during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci at rDNA replication pause sites during vegetative growth","type":"exact"}],"termid":"FYPO:0004820"}


id: PBO:0004213
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by mRNA stability","termid":"PBO:0004213"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: GO:0045937
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"positively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of phosphate metabolic process","type":"narrow"},{"name":"positive regulation of phosphate metabolism","type":"exact"},{"name":"stimulation of phosphate metabolic process","type":"narrow"},{"name":"up regulation of phosphate metabolic process","type":"exact"},{"name":"up-regulation of phosphate metabolic process","type":"exact"},{"name":"upregulation of phosphate metabolic process","type":"exact"}],"termid":"GO:0045937","terms_by_termid":{"GO:1905857":null}}


id: PBO:0067595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 757, pseudogene","termid":"PBO:0067595"}


id: PBO:0089225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38","termid":"PBO:0089225"}


id: PBO:0079484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin 2","termid":"PBO:0079484"}


id: GO:0141188
data:
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id: SO:0001443
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id: GO:0051983
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id: PBO:0081759
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id: PBO:0038480
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id: GO:0002015
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id: GO:0102813
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id: PBO:0079916
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id: PBO:0036534
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id: GO:0006397
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id: PBO:0074135
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 3","termid":"PBO:0074135"}


id: PR:O94659
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.01c","synonyms":[{"name":"Spom972h-nog1","type":"exact"}],"termid":"PR:O94659"}


id: PR:O14273
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8C9.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein C8C9.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.04","synonyms":[{"name":"Spom972h-SPAC8C9.04","type":"exact"}],"termid":"PR:O14273"}


id: PBO:0049895
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 5","termid":"PBO:0049895"}


id: PBO:0029230
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0029230"}


id: GO:0106097
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ceramide","termid":"GO:0106097"}


id: GO:0102534
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigenin-7,4'-dimethyl ether + O2 + NADPH + H+ = ladanein + H2O + NADP.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"apigenin-7,4'-dimethyl ether 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14751"],"termid":"GO:0102534"}


id: PBO:0055314
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2742","termid":"PBO:0055314"}


id: PBO:0040363
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b","termid":"PBO:0040363"}


id: GO:0008237
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id: GO:0046828
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id: GO:0035143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the caudal fin are generated and organized. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"caudal fin development","termid":"GO:0033336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin morphogenesis","termid":"GO:0035143"}


id: FYPO:0000705
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id: PBO:0078296
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-1","termid":"PBO:0078296"}


id: PBO:0086075
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: PR:Q10071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAAX prenyl protease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10120:SF17","OMA:SCHPO00795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.05","secondary_identifiers":["UniProtKB:Q10071"],"synonyms":[{"name":"PPSEP 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZMPSTE24","type":"exact"},{"name":"prenyl protein-specific endoprotease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10071"}


id: GO:0030422
data:
  {"annotated_genes":["SJAG_02817","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95742,105318],"is_not":false,"summary":null,"term":"GO:0030422"}]},"cv_name":"biological_process","definition":"A process leading to the generation of a functional small interfering RNA (siRNA). Includes the cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides. May also include amplification of the siRNA by RNA-directed RNA polymerase.","definition_xrefs":["PMID:11524674","PMID:20687832","PMID:19239886","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02817":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070919"],"synonyms":[{"name":"RNA interference, production of guide RNAs","type":"exact"},{"name":"RNA interference, production of siRNA","type":"exact"},{"name":"chromatin silencing by small RNA, production of guide RNAs","type":"exact"},{"name":"chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"production of guide RNAs involved in RNA interference","type":"exact"},{"name":"production of guide RNAs involved in chromatin silencing by small RNA","type":"exact"},{"name":"production of siRNA","type":"related"},{"name":"production of siRNA involved in PTGS","type":"related"},{"name":"production of siRNA involved in RNA interference","type":"exact"},{"name":"production of siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"production of siRNA involved in gene silencing by small RNA","type":"narrow"},{"name":"production of siRNA involved in post-transcriptional gene silencing by RNA","type":"exact"}],"termid":"GO:0030422","terms_by_termid":{"GO:0030422":null}}


id: GO:0008999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-alanyl-peptide = CoA + H+ + N-terminal N-alpha-acetyl-L-alanyl-peptide.","definition_xrefs":["RHEA:43752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0034212","GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide-alanine-alpha-N-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.128-RXN","RHEA:43756"],"synonyms":[{"name":"acetyl-CoA:ribosomal-protein-L-alanine N-acetyltransferase activity","type":"related"},{"name":"ribosomal protein S18 acetyltransferase activity","type":"related"},{"name":"ribosomal-protein-alanine N-acetyltransferase activity","type":"broad"}],"termid":"GO:0008999"}


id: PBO:0085954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0085954"}


id: PBO:0083162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene PSK2/YOL045W","termid":"PBO:0083162"}


id: PBO:0060101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 2","termid":"PBO:0060101"}


id: GO:0044487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the transmission of nerve impulses in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of transmission of nerve impulse in another organism","synonyms":[{"name":"envenomation resulting in modulation of conduction of nerve impulse in other organism","type":"exact"},{"name":"envenomation resulting in modulation of transmission of nerve impulse in other organism","type":"exact"}],"termid":"GO:0044487"}


id: FYPO:0007114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of microtubule bundles are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal microtubule bundle","synonyms":[{"name":"normal MT bundle","type":"exact"},{"name":"normal microtubule array","type":"related"},{"name":"normal microtubule bundle physical object quality","type":"exact"}],"termid":"FYPO:0007114"}


id: GO:0071074
data:
  {"annotated_genes":["SJAG_02390"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71041],"is_not":false,"summary":null,"term":"GO:0071074"}]},"cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor eIF2, a protein complex involved in the initiation of ribosome-mediated translation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02390":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"eukaryotic initiation factor eIF2 binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071074","terms_by_termid":{"GO:0071074":null}}


id: GO:1900002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anthocyanin catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of anthocyanin metabolic process","termid":"GO:0031539"},{"relation_name":"is_a","term_name":"regulation of anthocyanin catabolic process","termid":"GO:1900000"},{"relation_name":"positively_regulates","term_name":"anthocyanin-containing compound catabolic process","termid":"GO:0046284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anthocyanin catabolic process","synonyms":[{"name":"positive regulation of anthocyanin breakdown","type":"exact"},{"name":"positive regulation of anthocyanin catabolism","type":"exact"},{"name":"positive regulation of anthocyanin degradation","type":"exact"},{"name":"up regulation of anthocyanin breakdown","type":"exact"},{"name":"up regulation of anthocyanin catabolic process","type":"related"},{"name":"up regulation of anthocyanin catabolism","type":"exact"},{"name":"up regulation of anthocyanin degradation","type":"exact"}],"termid":"GO:1900002"}


id: PBO:0062384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 2 pseudogene","termid":"PBO:0062384"}


id: PBO:0054038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1374","termid":"PBO:0054038"}


id: GO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B acetylation (obsolete GO:0043969)","termid":"GO:0043969"}


id: GO:1900762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of averantin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"averantin catabolic process","synonyms":[{"name":"averantin breakdown","type":"exact"},{"name":"averantin catabolism","type":"exact"},{"name":"averantin degradation","type":"exact"}],"termid":"GO:1900762"}


id: GO:0002678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a chronic inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"positively_regulates","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chronic inflammatory response","synonyms":[{"name":"activation of chronic inflammatory response","type":"narrow"},{"name":"stimulation of chronic inflammatory response","type":"narrow"},{"name":"up regulation of chronic inflammatory response","type":"exact"},{"name":"up-regulation of chronic inflammatory response","type":"exact"},{"name":"upregulation of chronic inflammatory response","type":"exact"}],"termid":"GO:0002678"}


id: PBO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1 (predicted)","termid":"PBO:0000512"}


id: SO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000660 DNA_invertase_target_sequence (obsolete SO:0000660)","termid":"SO:0000660"}


id: PBO:0073630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 15","termid":"PBO:0073630"}


id: GO:2001256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of store-operated calcium entry","synonyms":[{"name":"regulation of SOCE","type":"exact"},{"name":"regulation of calcium ion import","type":"related"},{"name":"regulation of capacitative calcium entry","type":"exact"},{"name":"regulation of store-operated calcium import","type":"exact"}],"termid":"GO:2001256"}


id: GO:0034008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (R)-linalool + diphosphate.","definition_xrefs":["RHEA:15809","EC:4.2.3.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"R-linalool synthase activity","secondary_identifiers":["KEGG_REACTION:R07632","MetaCyc:4.2.3.26-RXN"],"synonyms":[{"name":"(-)-3R-linalool synthase activity","type":"related"},{"name":"(3R)-linalool synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [(3R)-linalool-forming] activity","type":"related"}],"termid":"GO:0034008"}


id: GO:0150202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["PMID:29377008","GOC:aruk","PMID:30280653","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"negatively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"},{"relation_name":"part_of","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transport across blood-brain barrier","termid":"GO:0150202"}


id: GO:0052390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host innate immune response (obsolete GO:0052390)","synonyms":[{"name":"activation by organism of host innate immune response","type":"exact"},{"name":"activation by organism of host innate immunity","type":"exact"},{"name":"activation by symbiont of host innate immunity","type":"exact"},{"name":"induction by organism of host innate immune response","type":"related"},{"name":"induction by organism of innate immune response in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host innate immunity","type":"exact"},{"name":"induction of host innate immunity","type":"exact"},{"name":"positive regulation by symbiont of host innate immune response","type":"related"},{"name":"positive regulation by symbiont of host innate immunity","type":"related"},{"name":"positive regulation of host innate immune response","type":"related"},{"name":"positive regulation of innate immune response in other organism","type":"broad"},{"name":"stimulation by symbiont of host innate immunity","type":"related"},{"name":"up regulation by symbiont of host innate immunity","type":"related"},{"name":"up-regulation by symbiont of host innate immunity","type":"related"},{"name":"upregulation by symbiont of host innate immunity","type":"exact"}],"termid":"GO:0052390"}


id: PBO:0071207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 48","termid":"PBO:0071207"}


id: PBO:0073451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor SWAP","termid":"PBO:0073451"}


id: GO:1905395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22700048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flavonoid","termid":"GO:1905395"}


id: GO:0008675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:4.1.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-phosphogluconate aldolase activity","secondary_identifiers":["MetaCyc:KDPGALDOL-RXN","RHEA:17089"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconate-6-phosphate D-glyceraldehyde-3-phosphate-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-gluconate-6-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogluconate aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogluconic aldolase activity","type":"related"},{"name":"2-keto-3-deoxygluconate-6-P-aldolase activity","type":"related"},{"name":"2-keto-3-deoxygluconate-6-phosphate aldolase activity","type":"related"},{"name":"2-oxo-3-deoxy-6-phosphogluconate aldolase activity","type":"related"},{"name":"6-phospho-2-keto-3-deoxygluconate aldolase activity","type":"related"},{"name":"KDPG aldolase activity","type":"related"},{"name":"KDPG-aldolase activity","type":"related"},{"name":"ODPG aldolase activity","type":"related"},{"name":"phospho-2-dehydro-3-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygluconic aldolase activity","type":"related"}],"termid":"GO:0008675"}


id: GO:2000811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"negatively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anoikis","synonyms":[{"name":"negative regulation of detachment induced cell death","type":"exact"},{"name":"negative regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000811"}


id: GO:1902685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["GOC:TermGenie","PMID:22252129","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"positively_regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor localization to synapse","synonyms":[{"name":"activation of receptor localisation to synapse","type":"narrow"},{"name":"activation of receptor localization to synapse","type":"narrow"},{"name":"positive regulation of receptor localisation to synapse","type":"exact"},{"name":"up regulation of receptor localisation to synapse","type":"exact"},{"name":"up regulation of receptor localization to synapse","type":"exact"},{"name":"up-regulation of receptor localisation to synapse","type":"exact"},{"name":"up-regulation of receptor localization to synapse","type":"exact"},{"name":"upregulation of receptor localisation to synapse","type":"exact"},{"name":"upregulation of receptor localization to synapse","type":"exact"}],"termid":"GO:1902685"}


id: PBO:0055697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLLL and CFNLAS motif containing 1","termid":"PBO:0055697"}


id: GO:1904911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["PMID:26586433","GOC:BHF","GOC:BHF_telomere","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"negatively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of RNA localization to telomere","synonyms":[{"name":"down regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"down regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"down-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"downregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"downregulation of establishment of RNA localization to telomere","type":"exact"},{"name":"inhibition of establishment of RNA localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of RNA localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of RNA localisation to telomere","type":"exact"}],"termid":"GO:1904911"}


id: FYPO:0005327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis does not occur.","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"abolished error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"},{"name":"error-free translesion synthesis of cyclobutane pyrimidine dimers abolished","type":"related"}],"termid":"FYPO:0005327"}


id: FYPO:0003677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell forms one or more branches near a septum, is elongated, has more than one septum, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated, multiseptate cell","termid":"FYPO:0000134"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"branched, curved, elongated, multiseptate vegetative cell","synonyms":[{"name":"branched, curved, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"branched, curved, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"branched, curved, long, multiseptate cell","type":"exact"}],"termid":"FYPO:0003677"}


id: PBO:0065375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 3","termid":"PBO:0065375"}


id: PBO:0086999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhodanese domain sulfur transferase; accepts persulfite from Nfs1p and transfers it to Uba4p in the pathway for 2-thiolation of the wobble uridine base of tRNAs; also stimulates sulfur transfer by Nfs1p; involved in metabolism of sterol esters; may be mitochondrially localized","termid":"PBO:0086999"}


id: PR:O14059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.01","synonyms":[{"name":"HolPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1672.01","type":"exact"}],"termid":"PR:O14059"}


id: FYPO:0007013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mature 5S rRNA level","synonyms":[{"name":"normal 5S rRNA level","type":"broad"},{"name":"normal mature 5S rRNA accumulation","type":"related"},{"name":"normal mature 5S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 5S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 5S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007013"}


id: PBO:0072552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase D4","termid":"PBO:0072552"}


id: FYPO:0006867
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115509,115510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115492,115488,115480,115481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell cortex","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell cortex","type":"exact"}],"termid":"FYPO:0006867","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:0150065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deacetylase activity.","definition_xrefs":["GOC:bc","PMID:19457097","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of deacetylase activity","termid":"GO:0150065"}


id: PBO:0091401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex proline-rich subunit Iss10/Pir1","termid":"PBO:0091401"}


id: GO:0002098
data:
  {"annotated_genes":["SJAG_03932","SJAG_04367","SJAG_01302","SJAG_05023","SJAG_02302","SJAG_04704","SJAG_04756","SJAG_01418","SJAG_03896","SJAG_00186","SJAG_04175","SJAG_00579","SJAG_01024","SJAG_00235","SJAG_04452","SJAG_00358","SJAG_04113","SJAG_03677","SJAG_03616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84047,92258,101739,114786],"is_not":false,"summary":null,"term":"GO:0002098"},{"annotations":[113132,90464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[104670,89004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[106354,114913,96751,91668,105692,110170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[113355,92193,103066,104604,102036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"}]},"cv_name":"biological_process","definition":"The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00235":null,"SJAG_00358":null,"SJAG_00579":null,"SJAG_01024":null,"SJAG_01302":null,"SJAG_01418":null,"SJAG_02302":null,"SJAG_03616":null,"SJAG_03677":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null,"SJAG_04175":null,"SJAG_04367":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null,"SJAG_05023":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble uridine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002098","terms_by_termid":{"GO:0002098":null,"GO:0002143":null,"GO:0002926":null,"GO:0070899":null,"GO:1990799":null}}


id: PBO:0046847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7 pseudogene 2","termid":"PBO:0046847"}


id: GO:0047770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + acceptor + H2O = a carboxylate + reduced acceptor.","definition_xrefs":["EC:1.2.99.6","MetaCyc:CARBOXYLATE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"carboxylate reductase activity","synonyms":[{"name":"aldehyde:(acceptor) oxidoreductase activity","type":"related"},{"name":"aldehyde:acceptor oxidoreductase activity","type":"related"},{"name":"carboxylic acid reductase activity","type":"related"}],"termid":"GO:0047770"}


id: PBO:0056086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY86 antisense RNA 1","termid":"PBO:0056086"}


id: PBO:0055884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit B","termid":"PBO:0055884"}


id: SO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region including the Transcription Start Site (TSS) of a gene and serving as a platform for Pre-Initiation Complex (PIC) assembly, enabling transcription of a gene under certain conditions.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_promoter","synonyms":[{"name":"Eukaryotic promoter","type":"exact"}],"termid":"SO:0002221"}


id: PBO:0077569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 275","termid":"PBO:0077569"}


id: GO:0071795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 11 in the target protein.","definition_xrefs":["GOC:sp","PMID:18775313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"K11-linked polyubiquitin modification-dependent protein binding","termid":"GO:0071795"}


id: PBO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 3","termid":"PBO:0048627"}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: GO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"regulation of (PG)H synthase activity","type":"related"},{"name":"regulation of PG synthetase activity","type":"related"},{"name":"regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060584"}


id: GO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three dimensional regular lattice found in etioplasts. It is composed of a continuous system of tubules but when exposed to light the symmetrical arrangement is rapidly lost as tubules become pinched off into two dimensional sections of lattice. These for perforated sheets of membrane that move apart, extend and increase, finally establishing the typical granal and intergranal lamellae of the mature chloroplast.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast prolamellar body","termid":"GO:0009541"}


id: PBO:0071803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reprimo, TP53 dependent G2 arrest mediator homolog","termid":"PBO:0071803"}


id: PBO:0051972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodotyrosine deiodinase","termid":"PBO:0051972"}


id: GO:2000727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell differentiation","termid":"GO:2000725"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell differentiation","synonyms":[{"name":"positive regulation of cardiomyocyte differentiation","type":"exact"},{"name":"positive regulation of heart muscle cell differentiation","type":"related"}],"termid":"GO:2000727"}


id: GO:0008086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel that is activated in response to light. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"},{"relation_name":"is_a","term_name":"light-activated monoatomic ion channel activity","termid":"GO:0010461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"light-activated voltage-gated calcium channel activity","synonyms":[{"name":"light-activated voltage gated calcium channel activity","type":"exact"},{"name":"light-activated voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008086"}


id: MOD:00450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this isotopic label from Unimod entry 57 is deprecated","definition_xrefs":["PubMed:11857757"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00450 acetate labeling reagent light form (K) (obsolete MOD:00450)","termid":"MOD:00450"}


id: FYPO:0004386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which single-stranded DNA binding by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished DNA binding","termid":"FYPO:0000659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000653","FYPO:0001985"],"is_obsolete":false,"name":"abolished single-stranded DNA binding","synonyms":[{"name":"abolished ssDNA binding","type":"exact"},{"name":"single-stranded DNA binding abolished","type":"exact"}],"termid":"FYPO:0004386"}


id: GO:0016126
data:
  {"annotated_genes":["SJAG_02855","SJAG_02982","SJAG_00770","SJAG_04790","SJAG_04499","SJAG_03509","SJAG_00624","SJAG_03249","SJAG_03349","SJAG_03929","SJAG_01474","SJAG_03235","SJAG_04059","SJAG_04865","SJAG_03024","SJAG_00413","SJAG_03531","SJAG_03598","SJAG_00580","SJAG_03352","SJAG_04810","SJAG_00453","SJAG_04018","SJAG_02044","SJAG_02068","SJAG_04217","SJAG_03715","SJAG_02104","SJAG_03018","SJAG_00158","SJAG_04049","SJAG_04270","SJAG_00717","SJAG_00370","SJAG_02719","SJAG_03750","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84723,87693,100879,115011,95038,90642,88801,92789,103903,111082,88748,105439,112724,103722,111254,100182,104036,85886,111412,84971,94239,107495,108003,99544,102711,100452,106281,100637,85004,95771,84942,105681,90833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[90087],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[106051],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[106052],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[102017,84811,84812],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-2541"],"synonyms":[{"name":"sterol anabolism","type":"exact"},{"name":"sterol biosynthesis","type":"exact"},{"name":"sterol formation","type":"exact"},{"name":"sterol synthesis","type":"exact"}],"termid":"GO:0016126","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:0070559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found in the lysosome that contains beta-galactosidase, cathepsin A, alpha-neuraminidase and N-acetylgalactosamine-6-sulfate sulfatase, and is involved in glycosaminoglycan catabolism.","definition_xrefs":["PMID:8910459","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773","GO:0032991"],"is_obsolete":false,"name":"lysosomal multienzyme complex","synonyms":[{"name":"GALNS-lysosomal hydrolase 1.27 MDa complex","type":"narrow"}],"termid":"GO:0070559"}


id: FYPO:0006218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to potassium ion starvation","synonyms":[{"name":"decreased growth during cellular response to potassium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to potassium ion starvation","type":"exact"},{"name":"hypersensitive to potassium ion starvation","type":"exact"},{"name":"reduced growth in low potassium","type":"related"},{"name":"sensitive to potassium ion depletion","type":"exact"},{"name":"sensitive to potassium ion deprivation","type":"exact"},{"name":"sensitive to potassium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to potassium starvation","type":"exact"}],"termid":"FYPO:0006218"}


id: PBO:0067240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 311, pseudogene","termid":"PBO:0067240"}


id: GO:1902902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagosome assembly.","definition_xrefs":["GO_REF:0000058","GOC:autophagy","GOC:TermGenie","PMID:21975012","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macroautophagy","termid":"GO:0016242"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of autophagosome assembly","termid":"GO:2000785"},{"relation_name":"negatively_regulates","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248","GO:0044085"],"is_obsolete":false,"name":"negative regulation of autophagosome assembly","synonyms":[{"name":"down regulation of PAS formation","type":"narrow"},{"name":"down regulation of autophagic vacuole assembly","type":"exact"},{"name":"down regulation of autophagic vacuole formation","type":"related"},{"name":"down regulation of autophagosome biosynthesis","type":"exact"},{"name":"down regulation of autophagosome formation","type":"exact"},{"name":"down-regulation of PAS formation","type":"narrow"},{"name":"down-regulation of autophagic vacuole assembly","type":"exact"},{"name":"down-regulation of autophagic vacuole formation","type":"related"},{"name":"down-regulation of autophagosome biosynthesis","type":"exact"},{"name":"down-regulation of autophagosome formation","type":"exact"},{"name":"downregulation of PAS formation","type":"narrow"},{"name":"downregulation of autophagic vacuole assembly","type":"exact"},{"name":"downregulation of autophagic vacuole formation","type":"related"},{"name":"downregulation of autophagosome biosynthesis","type":"exact"},{"name":"downregulation of autophagosome formation","type":"exact"},{"name":"inhibition of PAS formation","type":"narrow"},{"name":"inhibition of autophagic vacuole assembly","type":"narrow"},{"name":"inhibition of autophagic vacuole formation","type":"related"},{"name":"inhibition of autophagosome biosynthesis","type":"narrow"},{"name":"inhibition of autophagosome formation","type":"narrow"},{"name":"negative regulation of PAS formation","type":"narrow"},{"name":"negative regulation of autophagic vacuole assembly","type":"exact"},{"name":"negative regulation of autophagic vacuole formation","type":"related"},{"name":"negative regulation of autophagosome biosynthesis","type":"exact"},{"name":"negative regulation of autophagosome formation","type":"exact"}],"termid":"GO:1902902"}


id: PBO:0083413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPL10 which encodes the ribosomal protein L10","termid":"PBO:0083413"}


id: GO:1905673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysosome organization.","definition_xrefs":["GO_REF:0000058","PMID:25561470","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"is_a","term_name":"regulation of lysosome organization","termid":"GO:1905671"},{"relation_name":"positively_regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lysosome organization","synonyms":[{"name":"activation of lysosome organisation","type":"narrow"},{"name":"activation of lysosome organization","type":"narrow"},{"name":"activation of lysosome organization and biogenesis","type":"related"},{"name":"positive regulation of lysosome organisation","type":"exact"},{"name":"positive regulation of lysosome organization and biogenesis","type":"related"},{"name":"up regulation of lysosome organisation","type":"exact"},{"name":"up regulation of lysosome organization","type":"exact"},{"name":"up regulation of lysosome organization and biogenesis","type":"related"},{"name":"up-regulation of lysosome organisation","type":"exact"},{"name":"up-regulation of lysosome organization","type":"exact"},{"name":"up-regulation of lysosome organization and biogenesis","type":"related"},{"name":"upregulation of lysosome organisation","type":"exact"},{"name":"upregulation of lysosome organization","type":"exact"},{"name":"upregulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905673"}


id: GO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to insecticide","synonyms":[{"name":"insecticide resistance","type":"related"},{"name":"insecticide susceptibility/resistance","type":"related"}],"termid":"GO:0017085"}


id: PBO:0050955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma receptor 1","termid":"PBO:0050955"}


id: GO:0008298
data:
  {"annotated_genes":["SJAG_03696"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113442],"is_not":false,"summary":null,"term":"GO:0008298"}]},"cv_name":"biological_process","definition":"Any process in which mRNA is transported to, or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular mRNA localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"intracellular mRNA localisation","type":"exact"},{"name":"intracellular mRNA positioning","type":"narrow"},{"name":"mRNA localization, intracellular","type":"exact"},{"name":"mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:0008298","terms_by_termid":{"GO:0008298":null}}


id: PBO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPN antisense RNA 1","termid":"PBO:0050537"}


id: PBO:0044576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor, acyl-CoA binding protein","termid":"PBO:0044576"}


id: SO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The junction where an insertion occurred.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_site","synonyms":[{"name":"insertion site","type":"exact"}],"termid":"SO:0000366"}


id: FYPO:0004702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable cytoplasmic microtubules.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules absent from cell","termid":"FYPO:0002004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic microtubules absent from cell","synonyms":[{"name":"absent cytoplasmic microtubules","type":"exact"},{"name":"cytoplasmic microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0004702"}


id: GO:0033302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of quercetin.","definition_xrefs":["MetaCyc:PWY-5321","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin O-glucoside metabolic process","synonyms":[{"name":"quercetin O-glucoside metabolism","type":"exact"}],"termid":"GO:0033302"}


id: PBO:0089513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADP ribosylation factor GTPase activating protein family","termid":"PBO:0089513"}


id: GO:0030775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + glucuronoxylan D-glucuronate = S-adenosyl-L-homocysteine + glucuronoxylan 4-O-methyl-D-glucuronate.","definition_xrefs":["EC:2.1.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"glucuronoxylan 4-O-methyltransferase activity","secondary_identifiers":["MetaCyc:GLUCURONOXYLAN-4-O-METHYLTRANSFERASE-RXN","RHEA:20413"],"synonyms":[{"name":"S-adenosyl-L-methionine:glucuronoxylan-D-glucuronate 4-O-methyltransferase activity","type":"related"}],"termid":"GO:0030775"}


id: PBO:0066697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 1 homolog","termid":"PBO:0066697"}


id: PBO:0079979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 17","termid":"PBO:0079979"}


id: PBO:0090861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0090861"}


id: GO:0098932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall peptidoglycans to allow entry into the host cell.","definition_xrefs":["GOC:dos","VZ:3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell wall peptidoglycan","synonyms":[{"name":"catabolism of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host cell wall peptidoglycan by virus","type":"exact"},{"name":"degradation of host peptidoglycans during virus entry","type":"exact"},{"name":"disassembly by virus of host cell wall peptidoglycan","type":"exact"},{"name":"disruption by virus of host cell wall peptidoglycan during virus entry","type":"exact"}],"termid":"GO:0098932"}


id: PBO:0034702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1 (predicted)","termid":"PBO:0034702"}


id: GO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reproductive fruiting body development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reproductive fruiting body development","synonyms":[{"name":"regulation of fruiting body formation","type":"exact"}],"termid":"GO:0031155"}


id: SO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region specifically recognised by a recombinase, which inserts or removes another region marked by a distinct cognate integration/excision site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integration_excision_site","synonyms":[{"name":"attachment site","type":"related"},{"name":"integration excision site","type":"exact"}],"termid":"SO:0000946"}


id: PBO:0078399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 9-1","termid":"PBO:0078399"}


id: PBO:0005585
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YBR194W","termid":"PBO:0005585"}


id: PBO:0082734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for diauxic shift-induced histone H2B deposition onto rDNA genes; transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation","termid":"PBO:0082734"}


id: GO:0071254
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that can be visualized as a focus in the cytoplasm, and contains uridine-rich small nuclear ribonucleoproteins (U snRNPs) and essential snRNP assembly factors. These U bodies are invariably found in association with P bodies.","definition_xrefs":["PMID:17595295","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic U snRNP body","synonyms":[{"name":"U body","type":"exact"},{"name":"U-body","type":"exact"}],"termid":"GO:0071254"}


id: PATO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's being deficient in alertness or activity.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioural activity","termid":"PATO:0002265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethargic","termid":"PATO:0001418"}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0045362","GO:0050716"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: SO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Fifth intronic position after the intron exon boundary, close to the 5' edge of the intron.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"extended_cis_splice_site","termid":"SO:0001993"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_base_5","synonyms":[{"name":"intron base 5","type":"exact"}],"termid":"SO:0001994"}


id: GO:0085024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Sec complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by Sec complex (obsolete GO:0085024)","synonyms":[{"name":"modification by symbiont of host morphology or physiology via protein secreted by the Sec secretion system","type":"exact"}],"termid":"GO:0085024"}


id: PBO:0041696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 2","termid":"PBO:0041696"}


id: FYPO:0004047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains two nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"binucleate vegetative cell with fragmented septum","synonyms":[{"name":"binucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"binucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004047"}


id: PBO:0079517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 1","termid":"PBO:0079517"}


id: PBO:0055031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2446","termid":"PBO:0055031"}


id: PBO:0074912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83A","termid":"PBO:0074912"}


id: PBO:0080544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 3","termid":"PBO:0080544"}


id: PBO:0084937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mu3-like subunit of the clathrin associated protein complex (AP-3); functions in transport of alkaline phosphatase to the vacuole via the alternate pathway","termid":"PBO:0084937"}


id: PBO:0055152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2571","termid":"PBO:0055152"}


id: SO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic joining region which closely resembles a known functional imunoglobulin joining gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_pseudogene","synonyms":[{"name":"IG J pseudogene","type":"exact"},{"name":"IG joining pseudogene","type":"exact"},{"name":"IG_joining_pseudogene","type":"exact"},{"name":"Immunoglobulin Joining Pseudogene","type":"exact"},{"name":"Immunoglobulin_Joining_Pseudogene","type":"exact"}],"termid":"SO:0002101"}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: PBO:0048116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 4","termid":"PBO:0048116"}


id: SO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from a vertebrate immune system gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_pseudogene","synonyms":[{"name":"vertebrate immune system pseudogene","type":"exact"}],"termid":"SO:0002097"}


id: PBO:0069537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 807, pseudogene","termid":"PBO:0069537"}


id: FYPO:0004138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at telomere during vegetative growth","termid":"FYPO:0005064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004138"}


id: PR:000085737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at the fifth and seventh positions of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PMID:26264592","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"Spom-rpb1/Phos:4","type":"exact"},{"name":"rpb1/Phos(CTD-S5,S7)","type":"exact"}],"termid":"PR:000085737"}


id: FYECO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were first nitrogen starved at standard growth temperature, and then transferred to a rich medium at high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation at normal temperature and shift to high temperature in rich medium","termid":"FYECO:0000292"}


id: GO:0097720
data:
  {"annotated_genes":["SJAG_02858","SJAG_03799","SJAG_03793","SJAG_03631","SJAG_04668","SJAG_03879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88605,94307,109554,114713],"is_not":false,"summary":null,"term":"GO:0097720"},{"annotations":[97174,112312],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a transcription factor as a consequence of dephosphorylation by Ca(2+)-activated calcineurin. The process begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin is a calcium- and calmodulin-dependent serine/threonine protein phosphatase with a conserved function in eukaryotic species from yeast to humans. In yeast and fungi, calcineurin regulates stress signaling and cell cycle, and sporulation and virulence in pathogenic fungi. In metazoans, calcineurin is involved in cell commitment, organogenesis and organ development and immune function of T-lymphocytes. By a conserved mechanism, calcineurin phosphatase activates fungal Crz1 and mammalian NFATc by dephosphorylation and translocation of these transcription factors to the nucleus to regulate gene expression.","definition_xrefs":["PMID:26851544","PMID:25655284","GOC:di","PMID:25878052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcineurin signaling","type":"related"},{"name":"calcineurin-mediated signalling","type":"exact"}],"termid":"GO:0097720","terms_by_termid":{"GO:0097720":null,"GO:0106057":null}}


id: PBO:0045925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF containing fibulin extracellular matrix protein 1","termid":"PBO:0045925"}


id: PBO:0057678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268b","termid":"PBO:0057678"}


id: PBO:0078303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-8","termid":"PBO:0078303"}


id: GO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic anion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"volume-sensitive anion channel activity","secondary_identifiers":["Reactome:R-HSA-8941543"],"synonyms":[{"name":"volume-regulated channel","type":"broad"}],"termid":"GO:0005225"}


id: SO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACAGTG), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_heptamer","synonyms":[{"name":"V heptamer","type":"exact"},{"name":"V-HEPTAMER","type":"exact"}],"termid":"SO:0000533"}


id: GO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a protein hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"protein-hormone receptor activity","termid":"GO:0016500"}


id: MOD:01625
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to 1-thioglycine.","definition_xrefs":["PubMed:9367957","PubMed:11463785","RESID:AA0265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur substitution for oxygen","termid":"MOD:00749"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-thioglycine","synonyms":[{"name":"1-thioglycine","type":"exact"},{"name":"2-amino-1-sulfanylethanone","type":"exact"},{"name":"Carboxy->Thiocarboxy","type":"related"},{"name":"MOD_RES 1-thioglycine","type":"exact"},{"name":"S(O)Gly","type":"exact"},{"name":"aminoethanethioic acid","type":"exact"},{"name":"aminothioacetic acid","type":"exact"},{"name":"thiocarboxylic acid","type":"related"}],"termid":"MOD:01625"}


id: PBO:0064541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 2","termid":"PBO:0064541"}


id: GO:0033336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the caudal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin development","termid":"GO:0033336"}


id: PBO:0069808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1094, pseudogene","termid":"PBO:0069808"}


id: FYPO:0002346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin silencing at centromere outer repeat","synonyms":[{"name":"abnormal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"abnormal chromatin silencing at centromere otr","type":"exact"},{"name":"abnormal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abnormal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"abnormal chromatin silencing at pericentric region","type":"related"},{"name":"abnormal chromatin silencing at pericentromeric region","type":"related"},{"name":"abnormal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"abnormal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0002346"}


id: PBO:0033811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_S_phase_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033811"}


id: FYPO:0003550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during one or both meiotic nuclear divisions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiotic cell cycle","termid":"FYPO:0004991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during meiosis","synonyms":[{"name":"decreased protein accumulation during meiosis","type":"related"},{"name":"decreased protein level during meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis","type":"exact"}],"termid":"FYPO:0003550"}


id: PBO:0088333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas5","termid":"PBO:0088333"}


id: PBO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z5","termid":"PBO:0000426"}


id: GO:1990313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-III cohesin domain of a protein. Type-III cohesin domain is the binding partner of type-III dockerin domain.","definition_xrefs":["GOC:mengo_curators","PMID:23195689","PMID:24080387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type-III cohesin domain binding","termid":"GO:1990313"}


id: PR:P28748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:18422602","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.03c","secondary_identifiers":["PR:000027716","UniProtKB:P28748"],"synonyms":[{"name":"SPBC1289.03C","type":"related"},{"name":"Spom972h-spi1","type":"exact"}],"termid":"PR:P28748"}


id: GO:0008510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in).","definition_xrefs":["TC:2.A.31.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"monoatomic cation:bicarbonate symporter activity","termid":"GO:0140410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:bicarbonate symporter activity","secondary_identifiers":["Reactome:R-HSA-425483","RHEA:70267","Reactome:R-HSA-8878664","Reactome:R-HSA-5656219"],"synonyms":[{"name":"sodium/bicarbonate cotransporter activity","type":"broad"},{"name":"sodium:bicarbonate cotransporter activity","type":"broad"},{"name":"sodium:hydrogencarbonate symporter activity","type":"exact"}],"termid":"GO:0008510"}


id: GO:0045010
data:
  {"annotated_genes":["SJAG_02228","SJAG_02245","SJAG_01964","SJAG_01268","SJAG_04624","SJAG_01384","SJAG_04100","SJAG_03455","SJAG_02075","SJAG_01732","SJAG_03086","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85599],"is_not":false,"summary":null,"term":"GO:0045010"},{"annotations":[84402,95025,101340,94116,95861,96036,98923,99500,103347,86898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[87093],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament nucleation","type":"exact"}],"termid":"GO:0045010","terms_by_termid":{"GO:0034314":null,"GO:0034316":null,"GO:0045010":null}}


id: PBO:0040749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 1","termid":"PBO:0040749"}


id: GO:0102145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = (3R,6E)-nerolidol + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:27534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-(E)-nerolidol synthase activity","secondary_identifiers":["MetaCyc:RXN-11575","EC:4.2.3.49"],"termid":"GO:0102145"}


id: PBO:0078772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-4","termid":"PBO:0078772"}


id: GO:0035726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of common myeloid progenitor cells, resulting in the expansion of a cell population. A common myeloid progenitor cell is a progenitor cell committed to the myeloid lineage.","definition_xrefs":["CL:0000049","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common myeloid progenitor cell proliferation","termid":"GO:0035726"}


id: GO:0052797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [X]-4-O-methyl-D-glucuronic acid + H2O = [X]-OH + methyl-D-glucuronic acid. This reaction is the hydrolysis of the ester linkage between 4-O-methyl-D-glucuronic acid (MeGlcA) and an alcohol (-OH) group attached to a molecule, denoted here as [X].","definition_xrefs":["GOC:mengo_curators","PMID:16876163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"4-O-methyl-glucuronoyl methylesterase activity","synonyms":[{"name":"glucuronoyl esterase activity","type":"broad"}],"termid":"GO:0052797"}


id: PBO:0074457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 2","termid":"PBO:0074457"}


id: GO:0039687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral DNA replication process where only one strand is replicated at once, and which releases a single stranded DNA (ssDNA).","definition_xrefs":["GOC:bf","GOC:jl","VZ:1940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"viral DNA strand displacement replication","termid":"GO:0039687"}


id: GO:0050738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a fructosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"fructosyltransferase activity","termid":"GO:0050738"}


id: MOD:00360
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl copper sulfido molybdopterin cytosine dinuncleotide.","definition_xrefs":["PubMed:12475995","Unimod:444#C","RESID:AA0355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl copper sulfido molybdopterin cytosine dinuncleotide","synonyms":[{"name":"CuSMo","type":"related"},{"name":"L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide","type":"exact"},{"name":"[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with cytosine)methyl-6-oxo-3,4-dimercapto-pteridino[6,7-5,6]pyranoato-S3,S4]-cysteinyl-S-copper-mu-sulfido-molybdenum hydroxide oxide","type":"exact"},{"name":"copper sulfido molybdopterin cytosine dinuncleotide","type":"related"},{"name":"cysteinyl copper mu-sulfido Mo-pterin cytosine dinucleotide","type":"exact"}],"termid":"MOD:00360"}


id: GO:0140620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces a DNA strand exchange activity.","definition_xrefs":["PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678","GO:0030234","GO:0004857"],"is_obsolete":false,"name":"DNA strand exchange inhibitor activity","termid":"GO:0140620"}


id: GO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a mannosylglycerate from one side of a membrane to the other.","definition_xrefs":["GOC:ai","PMID:15034926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mannosylglycerate transmembrane transporter activity","termid":"GO:0051477"}


id: GO:0052325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall pectin biosynthetic process","synonyms":[{"name":"cell wall pectin biosynthesis","type":"exact"},{"name":"pectin biosynthesis during cell wall organization and biogenesis","type":"related"}],"termid":"GO:0052325"}


id: PBO:0063631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 9","termid":"PBO:0063631"}


id: PR:P26306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint control protein RAD9B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.07c","secondary_identifiers":["UniProtKB:P26306"],"synonyms":[{"name":"Spom972h-RAD9B","type":"exact"}],"termid":"PR:P26306"}


id: PBO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nramp family manganese ion transmembrane transporter","termid":"PBO:0017771"}


id: GO:0120227
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to an acyl-CoA, a thioester that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any carboxylic acid.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acyl binding","type":"broad"},{"name":"acyl-coenzyme A binding","type":"exact"}],"termid":"GO:0120227","terms_by_termid":{"GO:0036042":null}}


id: PBO:0076275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 3","termid":"PBO:0076275"}


id: PBO:0076185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 1","termid":"PBO:0076185"}


id: GO:0008574
data:
  {"annotated_genes":["SJAG_00332","SJAG_00851","SJAG_04745","SJAG_00930","SJAG_02336","SJAG_00773","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74745,87361,90976,99739,99940,100095,104462],"is_not":false,"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the plus end, driven by ATP hydrolysis.","definition_xrefs":["PMID:32842864","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"plus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.6.1.3","MetaCyc:3.6.4.4-RXN"],"synonyms":[{"name":"ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"ATP-dependent plus-end-directed microtubule motor activity","type":"exact"},{"name":"kinesin ATP phosphohydrolase (plus-end-directed)","type":"narrow"},{"name":"kinesin activity","type":"related"},{"name":"microtubule motor activity, plus-end-directed","type":"exact"},{"name":"plus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"plus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008574","terms_by_termid":{"GO:0008574":null}}


id: FYPO:0000088
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115295],"is_not":false,"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[115293,115294,115299,115300,115301],"is_not":false,"summary":null,"term":"FYPO:0000088"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydroxyurea. Cells stop growing (and may die) at a concentration of hydroxyurea that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01205":null,"SJAG_01680":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":6,"genotypes_by_uniquename":{"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01205","SJAG_01680"],"name":"sensitive to hydroxyurea","references_by_uniquename":{"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_01205","SJAG_01680","SJAG_04671","SJAG_04287","SJAG_00364"],"single_locus_genotype_uniquenames":["rad3delta","crb2delta","mrc1delta","chk1delta","cds1delta"],"synonyms":[{"name":"hypersensitive to hydroxyurea","type":"exact"},{"name":"sensitive to HU","type":"exact"},{"name":"sensitive to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0000088","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000088":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0076176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1D member 1 pseudogene 2","termid":"PBO:0076176"}


id: PBO:0042593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 7","termid":"PBO:0042593"}


id: FYPO:0009091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and proline as  nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009091"}


id: GO:1902632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["PMID:23223304","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"positively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane hyperpolarization","synonyms":[{"name":"activation of membrane hyperpolarization","type":"narrow"},{"name":"up regulation of membrane hyperpolarization","type":"exact"},{"name":"up-regulation of membrane hyperpolarization","type":"exact"},{"name":"upregulation of membrane hyperpolarization","type":"exact"}],"termid":"GO:1902632"}


id: PBO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOrphology Defective","termid":"PBO:0005595"}


id: GO:0046142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme and prosthetic group metabolic process (obsolete GO:0046142)","synonyms":[{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0046142"}


id: GO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells.","definition_xrefs":["GOC:dph","PMID:16678814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of timing of cell differentiation","termid":"GO:0048505"},{"relation_name":"negatively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of neuroepithelial cell differentiation","synonyms":[{"name":"negative regulation of neural plate formation","type":"narrow"},{"name":"repression of premature neural plate formation","type":"narrow"}],"termid":"GO:0002085"}


id: FYPO:0007830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein located in the medial cortical nodes occupies an area with a smaller radius than normal during interphase of the mitotic cell cycle. The nodes are \\\"precursor\\\" nodes that exist before the contractile ring is formed.","definition_xrefs":["PMID:33496728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase","synonyms":[{"name":"decreased protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"decreased protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical P-node","type":"related"},{"name":"narrow protein radial density distribution in medial cortical node during interphase of mitotic cell cycle","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase during vegetative growth","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical precursor node","type":"related"},{"name":"narrow radial density distribution of protein in medial cortical node during mitotic interphase","type":"exact"},{"name":"reduced protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"}],"termid":"FYPO:0007830"}


id: PBO:0079902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCRB antisense RNA 1","termid":"PBO:0079902"}


id: GO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTP cyclohydrolase I activity","termid":"GO:0043095"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of GTP cyclohydrolase I activity","synonyms":[{"name":"activation of GTP cyclohydrolase I activity","type":"narrow"},{"name":"stimulation of GTP cyclohydrolase I activity","type":"narrow"},{"name":"up regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"up-regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"upregulation of GTP cyclohydrolase I activity","type":"exact"}],"termid":"GO:0043104"}


id: PR:O94529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SSRP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit pob3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.05","secondary_identifiers":["UniProtKB:O94529"],"synonyms":[{"name":"Spom972h-SSRP1","type":"exact"},{"name":"facilitates chromatin transcription complex subunit pob3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94529"}


id: GO:1901566
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