# terms

id: GO:1901362
data:
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id: PBO:0052115
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id: GO:0004035
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id: GO:0001164
data:
  {"annotated_genes":["SJAG_02813","SJAG_00692"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105352,108131],"is_not":false,"summary":null,"term":"GO:0001164"}]},"cv_name":"molecular_function","definition":"Binding to a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery. This site is often referred to as the CORE element. In mammalian cells, the CORE element functions in conjunction with the Upstream Control Element (UCE), while in fungi, protozoa, and plants, the CORE element functions without a UCE.","definition_xrefs":["PMID:14969726","PMID:8057832","PMID:12865296","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core promoter sequence-specific DNA binding","termid":"GO:0001046"},{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_02813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase I core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001187"],"synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding","type":"exact"},{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity","type":"related"},{"name":"transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting","type":"related"}],"termid":"GO:0001164","terms_by_termid":{"GO:0001164":null}}


id: GO:1901082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of relaxation of muscle","termid":"GO:1901079"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"positively_regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of smooth muscle","synonyms":[{"name":"activation of relaxation of smooth muscle","type":"narrow"},{"name":"activation of smooth muscle relaxation","type":"exact"},{"name":"positive regulation of smooth muscle relaxation","type":"exact"},{"name":"up regulation of relaxation of smooth muscle","type":"exact"},{"name":"up regulation of smooth muscle relaxation","type":"exact"},{"name":"up-regulation of relaxation of smooth muscle","type":"exact"},{"name":"up-regulation of smooth muscle relaxation","type":"exact"},{"name":"upregulation of relaxation of smooth muscle","type":"exact"},{"name":"upregulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901082"}


id: PBO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-18 (pseudogene)","termid":"PBO:0051327"}


id: GO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on free oxidized methionine with specificity for the R enantiomer; does not act on oxidized methionine in peptide linkage. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["GOC:mcc","PMID:17535911","PMID:19049972"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine-R-sulfoxide reductase activity (obsolete GO:0070191)","termid":"GO:0070191"}


id: GO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hemocyte over time, from its formation to the mature structure. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte development","synonyms":[{"name":"arthropod blood cell development","type":"exact"}],"termid":"GO:0007516"}


id: GO:0048257
data:
  {"annotated_genes":["SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113274],"is_not":false,"summary":null,"term":"GO:0048257"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a 3' flap structure in DNA, but not other DNA structures; processes the 3' ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid","PMID:10635319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"},{"relation_name":"is_a","term_name":"flap endonuclease activity","termid":"GO:0048256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"3'-flap endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3' flap endonuclease activity","type":"exact"}],"termid":"GO:0048257","terms_by_termid":{"GO:0048257":null}}


id: PBO:0059252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL20 antisense RNA 1","termid":"PBO:0059252"}


id: GO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac endothelial to mesenchymal trnasition.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:26857067","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"},{"relation_name":"positively_regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0062000"}


id: FYPO:0009027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing phenylalanine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on phenylalanine nitrogen source","synonyms":[{"name":"increased growth on phenylalanine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on phenylalanine nitrogen source","type":"exact"}],"termid":"FYPO:0009027"}


id: FYPO:0004424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation (obsolete FYPO:0004424)","synonyms":[{"name":"increased peptidyl-threonine phosphorylation","type":"exact"},{"name":"increased threonine phosphorylation","type":"exact"}],"termid":"FYPO:0004424"}


id: PBO:0075386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp2 transcription factor","termid":"PBO:0075386"}


id: FYPO:0000882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000882"}


id: PBO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional enzyme","termid":"PBO:0003273"}


id: GO:1903526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane tubulation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:pm","PMID:18388313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of membrane tubulation","termid":"GO:1903525"},{"relation_name":"negatively_regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane tubulation","synonyms":[{"name":"down regulation of membrane tubulation","type":"exact"},{"name":"down regulation of plasma membrane tubulation","type":"exact"},{"name":"down-regulation of membrane tubulation","type":"exact"},{"name":"down-regulation of plasma membrane tubulation","type":"exact"},{"name":"downregulation of membrane tubulation","type":"exact"},{"name":"downregulation of plasma membrane tubulation","type":"exact"},{"name":"inhibition of membrane tubulation","type":"narrow"},{"name":"inhibition of plasma membrane tubulation","type":"narrow"},{"name":"negative regulation of plasma membrane tubulation","type":"exact"}],"termid":"GO:1903526"}


id: PBO:0000842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.2","termid":"PBO:0000842"}


id: PR:Q9P7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.16c","secondary_identifiers":["UniProtKB:Q9P7K8"],"synonyms":[{"name":"Spom972h-SUPT4H1","type":"exact"},{"name":"chromatin elongation factor spt4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K8"}


id: PBO:0031133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_nitrogen_starvation","termid":"PBO:0031133"}


id: GO:0032755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-6 production","termid":"GO:0032675"},{"relation_name":"positively_regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-6 production","secondary_identifiers":["GO:2000778","GO:0045410"],"synonyms":[{"name":"activation of interleukin-6 production","type":"narrow"},{"name":"positive regulation of IL-6 production","type":"exact"},{"name":"positive regulation of interleukin-6 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-6 secretion","type":"narrow"},{"name":"stimulation of interleukin-6 production","type":"narrow"},{"name":"up regulation of interleukin-6 production","type":"exact"},{"name":"up-regulation of interleukin-6 production","type":"exact"},{"name":"upregulation of interleukin-6 production","type":"exact"}],"termid":"GO:0032755"}


id: GO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"}


id: PBO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUPR2 pseudogene 1","termid":"PBO:0061699"}


id: PBO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex subunit Get1 (predicted)","termid":"PBO:0004905"}


id: GO:0018064
data:
  {"annotated_genes":["SJAG_02868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83905],"is_not":false,"summary":null,"term":"GO:0018064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + S-adenosyl-L-methionine = N(tele)-methyl-L-histidyl-[protein] + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:19369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0008276","GO:0003674","GO:0140096","GO:0016741"],"is_obsolete":false,"name":"protein-L-histidine N-tele-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.1.1.85-RXN","EC:2.1.1.85"],"synonyms":[{"name":"S-adenosyl methionine:protein-histidine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-histidine N-tele-methyltransferase activity","type":"related"},{"name":"actin-specific histidine methyltransferase activity","type":"related"},{"name":"peptidyl-histidine N-methyltransferase activity","type":"exact"},{"name":"protein (histidine) methyltransferase activity","type":"related"},{"name":"protein methylase IV activity","type":"narrow"},{"name":"protein-histidine N-methyltransferase activity","type":"broad"}],"termid":"GO:0018064","terms_by_termid":{"GO:0018064":null}}


id: PBO:0030415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_spindle_pole_body_duplication","termid":"PBO:0030415"}


id: PBO:0028545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_glucose_starvation","termid":"PBO:0028545"}


id: FYPO:0004156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during mitosis is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during mitosis","synonyms":[{"name":"decreased protein accumulation during mitosis","type":"related"},{"name":"decreased protein level during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein level during mitotic M phase","type":"related"},{"name":"decreased protein level during mitotic nuclear division","type":"exact"},{"name":"reduced protein level during mitosis","type":"exact"}],"termid":"FYPO:0004156"}


id: GO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type IV protein (DNA-protein) secretor activity (obsolete GO:0015449)","synonyms":[{"name":"type IV protein (DNA-protein) secretor activity","type":"exact"}],"termid":"GO:0015449"}


id: MOD:01661
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to pyruvic acid.","definition_xrefs":["PubMed:10085076","RESID:AA0127#TYR","PubMed:3042771","PubMed:8464063","PubMed:500639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Tyr)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Tyr)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01661"}


id: PBO:0064476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLG divergent transcript","termid":"PBO:0064476"}


id: PBO:0087392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S/T kinase and catalytic subunit of DDK (Dbf4-dependent kinase); required for origin firing and replication initiation; phosphorylates MCM subunits and Cdc45 to drive assembly of the pre-IC and the CMG helicase; maintains Cse4p at kinetochores through phosphorylation to regulate chromosome segregation, regulates pre-meiotic replication, meiotic DSB formation, monopolar attachment of homologs during MI through monopolin recruitment and middle meiotic gene expression; HsCDC7 and DBF4 complement","termid":"PBO:0087392"}


id: PBO:0091852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting lincRNA Ste11 repressor","termid":"PBO:0091852"}


id: PBO:0084065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Rho3p and Rho4p; involved in repolarization of actin cytoskeleton during adaptation to heat shock stress; phosphorylated by Pkc1p","termid":"PBO:0084065"}


id: PBO:0067278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 357, pseudogene","termid":"PBO:0067278"}


id: PBO:0087179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I second largest subunit A135","termid":"PBO:0087179"}


id: PBO:0044053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP3 and E2F8 antisense RNA 1","termid":"PBO:0044053"}


id: PBO:0050087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 7","termid":"PBO:0050087"}


id: PBO:0078640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triple QxxK/R motif containing","termid":"PBO:0078640"}


id: GO:0052642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lysophosphatidic acid + H2O = phosphate + monoacylglycerol.","definition_xrefs":["PMID:20045079","PMID:7966317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"lysophosphatidic acid phosphatase activity","secondary_identifiers":["Reactome:R-HSA-8878654","EC:3.1.3.106","RHEA:33155","MetaCyc:RXNQT-4375"],"synonyms":[{"name":"1-acyl-sn-glycerol 3-phosphatase activity","type":"exact"},{"name":"2-lysophosphatidate phosphatase activity","type":"exact"},{"name":"LPA phosphatase activity","type":"exact"},{"name":"lysophosphatidate phosphatase activity","type":"exact"}],"termid":"GO:0052642"}


id: FYPO:0005867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 at ribosomal DNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at rDNA during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005867"}


id: PBO:0076610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 28","termid":"PBO:0076610"}


id: PBO:0003728
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds SRE 5'-[A/T]TCAC[A/C]CAT-3'","termid":"PBO:0003728"}


id: GO:0048214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"}


id: GO:0047468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucose-1-phosphate = glucose-6-phosphate; using D-glucose as a cofactor.","definition_xrefs":["EC:5.4.2.5","MetaCyc:5.4.2.5-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoglucomutase activity","termid":"GO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"phosphoglucomutase (glucose-cofactor) activity","secondary_identifiers":["MetaCyc:RXN-16999"],"synonyms":[{"name":"alpha-D-glucose 1,6-phosphomutase (glucose-cofactor)","type":"related"},{"name":"glucose-1-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047468"}


id: GO:1990672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a medial-Golgi-derived vesicle to the lipid bilayer membrane around the Golgi trans cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"medial-Golgi-derived vesicle fusion with Golgi trans cisterna membrane","termid":"GO:1990672"}


id: PBO:0078519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 9","termid":"PBO:0078519"}


id: GO:1905790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mechanosensory behavior.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8692859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"mechanosensory behavior","termid":"GO:0007638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mechanosensory behavior","synonyms":[{"name":"regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"regulation of mechanosensory behaviour","type":"exact"}],"termid":"GO:1905790"}


id: PBO:0027947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_mitosis","termid":"PBO:0027947"}


id: PBO:0075546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1L-ADORA2A readthrough (NMD candidate)","termid":"PBO:0075546"}


id: GO:0018226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine to form peptidyl-S-farnesyl-L-cysteine; formation of S-farnesycysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CXXX motif and methyl esterification of the farnesylated cysteine; the residue may be found at the first position in the sequence motif C-X-X-(SAQCMT)* where the second and third positions are usually aliphatic.","definition_xrefs":["RESID:AA0102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein farnesylation","termid":"GO:0018343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-farnesyl-L-cysteine biosynthetic process from peptidyl-cysteine","synonyms":[{"name":"peptidyl-S-farnesyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018226"}


id: GO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric distal convoluted tubule cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell fate commitment","termid":"GO:0072146"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell fate commitment","synonyms":[{"name":"metanephric distal convoluted tubule cell fate commitment","type":"exact"}],"termid":"GO:0072242"}


id: PBO:0028629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0028629"}


id: FYPO:0001695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a protease inhibitor. Cells stop growing (and may die) at a concentration of a protease inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to protease inhibitor","synonyms":[{"name":"hypersensitive to protease inhibitor","type":"exact"},{"name":"sensitive to protease inhibitor during mitotic cell cycle","type":"related"},{"name":"sensitive to protease inhibitor during vegetative growth","type":"exact"}],"termid":"FYPO:0001695"}


id: PBO:0071788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p21","termid":"PBO:0071788"}


id: PBO:0065627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 5","termid":"PBO:0065627"}


id: GO:1901229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901229)","synonyms":[{"name":"regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901229"}


id: PBO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 2","termid":"PBO:0048395"}


id: GO:0048095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-specific pigmentation","termid":"GO:0048071"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female pigmentation","termid":"GO:0048095"}


id: PBO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A2, pseudogene","termid":"PBO:0047060"}


id: GO:0097131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D1-CDK6 complex","termid":"GO:0097131"}


id: GO:0003324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic delta cell over time, from its formation to the mature structure. A delta cell is a cell of the pancreas that produces somatostatin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"part_of","term_name":"pancreatic D cell differentiation","termid":"GO:0003311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic D cell development","synonyms":[{"name":"pancreatic delta cell development","type":"exact"}],"termid":"GO:0003324"}


id: GO:0043873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.","definition_xrefs":["PMID:6352705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate-flavodoxin oxidoreductase activity","secondary_identifiers":["MetaCyc:PYFLAVOXRE-RXN","RHEA:44140"],"synonyms":[{"name":"NifJ","type":"related"},{"name":"pyruvate:flavodoxin oxidoreductase activity","type":"exact"}],"termid":"GO:0043873"}


id: PBO:0078739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT1 pseudogene 1","termid":"PBO:0078739"}


id: GO:0062041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or exent of meiotic sister chromatid arm separation, the cell cycle process in which sister chromatid arms are physically detached from each other during meiosis.","definition_xrefs":["PMID:20383139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic chromosome separation","termid":"GO:1905134"},{"relation_name":"positively_regulates","term_name":"meiotic sister chromatid arm separation","termid":"GO:0051755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiotic sister chromatid arm separation","termid":"GO:0062041"}


id: PBO:0084610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YGL210W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL211W","termid":"PBO:0084610"}


id: GO:0016885
data:
  {"annotated_genes":["SJAG_03313","SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003989"},{"annotations":[101619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004736"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules via a carbon-carbon bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.4.-.-","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"ligase activity, forming carbon-carbon bonds","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016885","terms_by_termid":{"GO:0003989":null,"GO:0004736":null}}


id: PBO:0076499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 2","termid":"PBO:0076499"}


id: PR:O42899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SCO1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02563","PANTHER:PTHR12151:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sco1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.06","secondary_identifiers":["UniProtKB:O42899"],"synonyms":[{"name":"Spom972h-SCO1","type":"exact"}],"termid":"PR:O42899"}


id: PR:Q10061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsh1 gene.","definition_xrefs":["UniProtKB:Q10061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog lhs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.06","synonyms":[{"name":"Spom972h-lsh1","type":"exact"}],"termid":"PR:Q10061"}


id: PBO:0075266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 19","termid":"PBO:0075266"}


id: GO:0060198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted vesicle","synonyms":[{"name":"clathrin sculpted vesicle","type":"exact"}],"termid":"GO:0060198"}


id: GO:0070374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of ERK1 and ERK2 cascade","termid":"GO:0070372"},{"relation_name":"positively_regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"activation of ERK1 and ERK2 cascade","type":"narrow"},{"name":"positive regulation of ERK cascade","type":"broad"},{"name":"positive regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"positive regulation of ERK1 cascade","type":"narrow"},{"name":"positive regulation of ERK1/2 cascade","type":"exact"},{"name":"positive regulation of ERK2 cascade","type":"narrow"},{"name":"positive regulation of MAPK1 cascade","type":"narrow"},{"name":"positive regulation of MAPK3 cascade","type":"narrow"},{"name":"stimulation of ERK1 and ERK2 cascade","type":"narrow"},{"name":"up regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"up-regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"upregulation of ERK1 and ERK2 cascade","type":"exact"}],"termid":"GO:0070374"}


id: GO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the basilar pons through the medullary pyramid in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls","PMID:9878731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the medullary pyramid","synonyms":[{"name":"corticospinal neuron axon pathfinding through the medullary pyramid","type":"exact"}],"termid":"GO:0021971"}


id: PBO:0056410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 7","termid":"PBO:0056410"}


id: MOD:00638
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-arginine residue with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated L-arginine.","definition_xrefs":["PubMed:15782174","Unimod:330"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"dimethylated L-arginine","termid":"MOD:00783"},{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,6x(2)H labeled dimethylated L-arginine","synonyms":[{"name":"Dimethyl:2H(6)13C(2)","type":"related"},{"name":"dimethylated arginine","type":"related"}],"termid":"MOD:00638"}


id: PBO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_catabolism_of","termid":"PBO:0034092"}


id: PBO:0067892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 194","termid":"PBO:0067892"}


id: PBO:0029424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation","termid":"PBO:0029424"}


id: GO:0009588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from UV-A or blue light into a molecular signal; the UV-A, blue light range is defined as having a wavelength within the range of 315 to 400 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"UV-A, blue light phototransduction","synonyms":[{"name":"blue-sensitive opsin","type":"related"},{"name":"short-wave-sensitive opsin","type":"related"},{"name":"violet-sensitive opsin","type":"related"}],"termid":"GO:0009588"}


id: PBO:0047960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fraser extracellular matrix complex subunit 1","termid":"PBO:0047960"}


id: GO:1905488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16516839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of anterior/posterior axon guidance","termid":"GO:1905486"},{"relation_name":"positively_regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior/posterior axon guidance","synonyms":[{"name":"activation of anterior-posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon pathfinding","type":"narrow"},{"name":"positive regulation of anterior-posterior axon guidance","type":"exact"},{"name":"positive regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up-regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"upregulation of anterior-posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905488"}


id: PBO:0063423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4B antisense RNA 1","termid":"PBO:0063423"}


id: PBO:0038739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 11, pseudogene","termid":"PBO:0038739"}


id: PBO:0080215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vimentin","termid":"PBO:0080215"}


id: PBO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_35S_rRNA_precursor_level","termid":"PBO:0030668"}


id: PBO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUNK antisense RNA 1","termid":"PBO:0050809"}


id: PBO:0110027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACCSL pseudogene 1","termid":"PBO:0110027"}


id: PBO:0108604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_negatively_regulates","termid":"PBO:0108604"}


id: PBO:0085249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perilipin, involved in formation and stability of lipid droplets; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange","termid":"PBO:0085249"}


id: PBO:0076073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 related adaptor beta","termid":"PBO:0076073"}


id: GO:0022611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process in which dormancy (sometimes called a dormant state) is induced, maintained or broken. Dormancy is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","GOC:isa_complete","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy process","synonyms":[{"name":"multicellular organism dormancy process","type":"narrow"},{"name":"spore dormancy process","type":"narrow"}],"termid":"GO:0022611"}


id: PBO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-fold modifier-specific protease (predicted)","termid":"PBO:0001593"}


id: PBO:0031148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_beta-glucan_level","termid":"PBO:0031148"}


id: PBO:0088294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta catalytic subunit Rev3","termid":"PBO:0088294"}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","secondary_identifiers":["MetaCyc:THIOREDOX-PWY"],"synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: GO:0010325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of raffinose family oligosaccharides (RFOs, such as raffinose, stachyose, verbascose and other molecules with a higher degree of galactosyl polymerization).","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"raffinose family oligosaccharide biosynthetic process","synonyms":[{"name":"raffinose family oligosaccharide biosynthesis","type":"exact"}],"termid":"GO:0010325"}


id: FYPO:0002000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, and contains one nucleus and one or more septa. The nucleus is not in the normal location.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"},{"relation_name":"is_a","term_name":"septated mononucleate vegetative cell with mislocalized nucleus and anucleate compartment","termid":"FYPO:0007646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000004","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"inviable septated mononucleate vegetative cell","secondary_identifiers":["FYPO:0005276"],"synonyms":[{"name":"cytokinesis in the absence of nuclear division","type":"related"},{"name":"cytokinesis without nuclear division","type":"related"},{"name":"inviable cell with cytokinesis in the absence of nuclear division","type":"related"},{"name":"inviable cell with cytokinesis without nuclear division","type":"related"},{"name":"inviable cell with premature septation","type":"related"},{"name":"inviable cell with septation in the absence of nuclear division","type":"related"},{"name":"inviable cell with septation independent of mitosis","type":"related"},{"name":"inviable cell with septation without nuclear division","type":"related"},{"name":"inviable septated mononucleate cell","type":"exact"},{"name":"inviable septated mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable septated mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable septated mononucleate vegetative cell with mislocalized nucleus","type":"exact"},{"name":"lethal; septated mononucleate vegetative cell","type":"exact"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"}],"termid":"FYPO:0002000"}


id: PR:O94538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6.U5 tri-snRNP-associated protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14152:SF5","PRO:DNx","OMA:SCHPO00627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 tri-snRNP-associated protein snu66 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.03c","secondary_identifiers":["UniProtKB:O94538"],"synonyms":[{"name":"Spom972h-SART1","type":"exact"}],"termid":"PR:O94538"}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["EC:5.1.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-galactose 6-phosphate 1-epimerase activity","secondary_identifiers":["MetaCyc:RXN-14816"],"termid":"GO:0102541"}


id: PR:Q9P782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activator of 90 kDa heat shock protein ATPase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03151","PANTHER:PTHR13009:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1711.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.08","secondary_identifiers":["UniProtKB:Q9P782"],"synonyms":[{"name":"Spom972h-AHSA1","type":"exact"}],"termid":"PR:Q9P782"}


id: PBO:0058677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6805","termid":"PBO:0058677"}


id: PBO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin delta 1","termid":"PBO:0044181"}


id: PBO:0065049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 3","termid":"PBO:0065049"}


id: PATO:0000520
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000520 radiation sensitivity value (obsolete PATO:0000520)","termid":"PATO:0000520"}


id: GO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of granuloma formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granuloma formation","termid":"GO:0002631"},{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"negatively_regulates","term_name":"granuloma formation","termid":"GO:0002432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granuloma formation","synonyms":[{"name":"down regulation of granuloma formation","type":"exact"},{"name":"down-regulation of granuloma formation","type":"exact"},{"name":"downregulation of granuloma formation","type":"exact"},{"name":"inhibition of granuloma formation","type":"narrow"}],"termid":"GO:0002632"}


id: RO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor anatomical structure type T to T', where T' develops_from T","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_induced_by","termid":"RO:0002256"}


id: PBO:0070485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 20","termid":"PBO:0070485"}


id: PBO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartin","termid":"PBO:0000526"}


id: PBO:0073426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 2","termid":"PBO:0073426"}


id: PBO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunity Seh1","termid":"PBO:0014249"}


id: GO:0120147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A [sulfatase]-L-cysteine + O2 + 2 a thiol = a [sulfatase]-3-oxo-L-alanine + hydrogen sulfide + a disulfide + H2O.","definition_xrefs":["EC:1.8.3.7","RHEA:51152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"formylglycine-generating oxidase activity","secondary_identifiers":["MetaCyc:RXN-16226"],"termid":"GO:0120147"}


id: PBO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible horizontal transfer","termid":"PBO:0000085"}


id: GO:0042914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.","definition_xrefs":["GOC:jl","PMID:17347522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriocin transport","termid":"GO:0043213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"colicin transport","termid":"GO:0042914"}


id: PBO:0048544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided entry of tail-anchored proteins factor 4","termid":"PBO:0048544"}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["UniProtKB:C6Y4C5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: PATO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer exhibiting deterioration of its structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degeneration","termid":"PATO:0002037"}


id: GO:0032839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a dendrite, excluding the surrounding plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"dendrite cytoplasm","synonyms":[{"name":"dendritic cytoplasm","type":"exact"}],"termid":"GO:0032839"}


id: PR:O94720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.08 gene.","definition_xrefs":["UniProtKB:O94720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain-containing protein C1393.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.08","synonyms":[{"name":"Spom972h-SPCC1393.08","type":"exact"}],"termid":"PR:O94720"}


id: GO:0097664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Grr1 in S. cerevisiae (Pof2 in S. pombe).","definition_xrefs":["GOC:vw","PMID:10213692","PMID:15147268","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Grr1/Pof2 ubiquitin ligase complex","termid":"GO:0097664"}


id: PBO:0081086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 16","termid":"PBO:0081086"}


id: PR:P41890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scn3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut9-interacting protein scn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.13","synonyms":[{"name":"Spom972h-scn3","type":"exact"}],"termid":"PR:P41890"}


id: PBO:0072829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SANT and BTB domain regulator of CSR","termid":"PBO:0072829"}


id: PBO:0031529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031529"}


id: PBO:0085525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S26, no bacterial homolog; RPS26A has a paralog, RPS26B, that arose from the whole genome duplication; human homolog can partially complement an RPS26A, RPS26B double null mutant; mutations in the human gene are associated with Diamond-Blackfan anemia","termid":"PBO:0085525"}


id: PBO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030829"}


id: PBO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex ubiquitin -protein ligase E3 subunit Apc11","termid":"PBO:0017604"}


id: PBO:0059723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 31","termid":"PBO:0059723"}


id: PBO:0070733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 3","termid":"PBO:0070733"}


id: GO:0090721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune response mediated by naive T or B cells against an antigen not previously encountered by immune system.","definition_xrefs":["GOC:add","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"primary adaptive immune response","termid":"GO:0090720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary adaptive immune response involving T cells and B cells","termid":"GO:0090721"}


id: PBO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 2","termid":"PBO:0046539"}


id: PBO:0091502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere proximal lncRNA","termid":"PBO:0091502"}


id: PBO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi5 complex subunit Swi2","termid":"PBO:0002146"}


id: PBO:0036479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone Cox17 (predicted)","termid":"PBO:0036479"}


id: FYPO:0006528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of hydrolysis of peptide bonds within a protein is decreased during the meiotic cell cycle. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased proteolysis during meiotic cell cycle","synonyms":[{"name":"decreased peptidolysis during meiotic cell cycle","type":"exact"},{"name":"decreased protein cleavage during meiotic cell cycle","type":"related"},{"name":"reduced proteolysis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006528"}


id: GO:1901329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontoblast differentiation","termid":"GO:1901329"}


id: GO:0033899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides ending in Ap or Gp with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"ribonuclease U2 activity","secondary_identifiers":["MetaCyc:3.1.27.3-RXN","MetaCyc:RXN-19928"],"synonyms":[{"name":"RNase U2 activity","type":"related"},{"name":"pleospora RNase activity","type":"exact"},{"name":"purine specific endoribonuclease activity","type":"exact"},{"name":"purine-specific RNase activity","type":"exact"},{"name":"purine-specific ribonuclease activity","type":"exact"},{"name":"ribonuclease (purine) activity","type":"exact"},{"name":"trichoderma koningi RNase III activity","type":"exact"}],"termid":"GO:0033899"}


id: PBO:0079072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 6-1","termid":"PBO:0079072"}


id: GO:2000492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-18-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-18-mediated signaling pathway","termid":"GO:0035655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-18-mediated signaling pathway","synonyms":[{"name":"regulation of interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:2000492"}


id: PBO:0068161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 468","termid":"PBO:0068161"}


id: GO:0018531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.5","RHEA:11880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-6-hydroxynicotine oxidase activity","secondary_identifiers":["MetaCyc:S-6-HYDROXYNICOTINE-OXIDASE-RXN","UM-BBD_reactionID:r0478","KEGG_REACTION:R03202"],"synonyms":[{"name":"(S)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-L-nicotine oxidase activity","type":"exact"},{"name":"6-hydroxy-L-nicotine:oxygen oxidoreductase activity","type":"related"},{"name":"L-6-hydroxynicotine oxidase activity","type":"exact"}],"termid":"GO:0018531"}


id: PBO:0016553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85b (predicted)","termid":"PBO:0016553"}


id: FYPO:0006966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular acetyl-CoA level","synonyms":[{"name":"increased acetyl-CoA accumulation","type":"related"},{"name":"increased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetyl-CoA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006966"}


id: PBO:0017578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1 (predicted)","termid":"PBO:0017578"}


id: GO:0061352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the outgrowing Malpighian tubule guided by specific chemical cues/signals. Movement may be towards a guidance cue (positive chemotaxis) or away from it (negative chemotaxis). Guidance contributes to the final positioning of the tubule.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"cell rearrangement involved in Malpighian tubule morphogenesis","termid":"GO:0061334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis involved in Malpighian tubule morphogenesis","termid":"GO:0061352"}


id: PBO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.101","termid":"PBO:0002487"}


id: PBO:0067310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 396, pseudogene","termid":"PBO:0067310"}


id: GO:0009764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is phosphoenolpyruvate carboxykinase (PEPCK).","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"PEP carboxykinase C4 photosynthesis","termid":"GO:0009764"}


id: PBO:0088773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk8","termid":"PBO:0088773"}


id: GO:0097047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromosomal region that contains fork pausing elements influencing the progression and merging of DNA replication forks.","definition_xrefs":["PMID:20797631","GOC:pr","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DNA replication termination region","synonyms":[{"name":"TER","type":"exact"}],"termid":"GO:0097047"}


id: PBO:0081560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 484","termid":"PBO:0081560"}


id: PATO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000514 intolerant value (obsolete PATO:0000514)","termid":"PATO:0000514"}


id: PBO:0013791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein Hal3","termid":"PBO:0013791"}


id: PBO:0050203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 20","termid":"PBO:0050203"}


id: PBO:0061198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIN1 (RPN12) binding protein 1 homolog","termid":"PBO:0061198"}


id: GO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of prophase I in meiosis, and during which the chromosomes first become visible.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"leptotene","secondary_identifiers":["Wikipedia:Leptotene","Wikipedia:Meiosis#Leptotene"],"termid":"GO:0000237"}


id: GO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a transmembrane receptor protein tyrosine kinase and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["GOC:mtg_MIT_16mar07","PMID:20565848","PMID:10502414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"},{"relation_name":"is_a","term_name":"receptor tyrosine kinase binding","termid":"GO:0030971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase adaptor activity","secondary_identifiers":["GO:0005069"],"synonyms":[{"name":"transmembrane receptor protein tyrosine kinase adaptor protein activity","type":"exact"},{"name":"transmembrane receptor protein tyrosine kinase docking protein activity","type":"related"}],"termid":"GO:0005068"}


id: PBO:0044234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4A","termid":"PBO:0044234"}


id: PBO:0086822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL011C is not an essential gene","termid":"PBO:0086822"}


id: PBO:0043679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 6","termid":"PBO:0043679"}


id: GO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + acceptor = 2-dehydro-D-gluconate + reduced acceptor.","definition_xrefs":["RHEA:12769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:GLUCONATE-2-DEHYDROGENASE-RXN","EC:1.1.99.3"],"synonyms":[{"name":"2-ketogluconate reductase activity","type":"broad"},{"name":"D-gluconate dehydrogenase activity","type":"related"},{"name":"D-gluconate dehydrogenase, 2-keto-D-gluconate-yielding activity","type":"related"},{"name":"D-gluconate:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"gluconate oxidase activity","type":"related"},{"name":"gluconic acid dehydrogenase activity","type":"related"},{"name":"gluconic dehydrogenase activity","type":"related"}],"termid":"GO:0033717"}


id: GO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"basement membrane assembly","termid":"GO:0070831"}


id: GO:2000343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904209"],"synonyms":[{"name":"positive regulation of CCL2 secretion","type":"exact"},{"name":"positive regulation of CXCL2 production","type":"exact"},{"name":"positive regulation of MIP-2 production","type":"exact"},{"name":"positive regulation of MIP2 production","type":"exact"},{"name":"positive regulation of SCYB2 production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000343"}


id: GO:0120093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"}


id: GO:0090589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + trehalose (out) = protein cysteine + trehalose-6-phosphate (in).","definition_xrefs":["PMID:7608078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0022857","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-trehalose phosphotransferase system transporter activity","termid":"GO:0090589"}


id: PBO:0084007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen branching enzyme, involved in glycogen accumulation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress; glycogen accumulation defect of the null mutant is functionally complemented by human GBE1, which is associated with glycogen storage disease","termid":"PBO:0084007"}


id: GO:0008914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucyl-tRNA(Leu) + N-terminal L-arginyl-[protein] = H+ + N-terminal L-leucyl-L-arginyl-[protein] + tRNA(Leu). Can also transfer the leucyl residue on an N-terminal L-lysyl residue.","definition_xrefs":["EC:2.3.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"leucyl-tRNA--protein transferase activity","secondary_identifiers":["MetaCyc:LEUCYLTRANSFERASE-RXN"],"synonyms":[{"name":"leucyltransferase activity","type":"related"},{"name":"L/F transferase activity","type":"related"},{"name":"leucyl-phenylalanine-transfer ribonucleate-protein aminoacyltransferase activity","type":"related"},{"name":"leucyl-phenylalanine-transfer ribonucleate-protein transferase activity","type":"related"}],"termid":"GO:0008914"}


id: PBO:0053010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMP5 antisense RNA 1","termid":"PBO:0053010"}


id: PBO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transporter 1 (predicted)","termid":"PBO:0002920"}


id: PBO:0039934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF38 intronic transcript 1","termid":"PBO:0039934"}


id: PBO:0090247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Ssu72","termid":"PBO:0090247"}


id: GO:0072532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on triferuloyl spermidine or any of its mono- or di-(hydroxyferuloyl)-spermidine derivatives.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}


id: GO:1900349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"down regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"down-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"downregulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"inhibition of methane biosynthetic process from methylamine","type":"narrow"}],"termid":"GO:1900349"}


id: GO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(indol-3-ylacetyl)-beta-D-glucose + myo-inositol = 1L-1-O-(indol-3-yl)acetyl-myo-inositol + D-glucose.","definition_xrefs":["RHEA:21180","EC:2.3.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"indoleacetylglucose-inositol O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04333","MetaCyc:2.3.1.72-RXN"],"synonyms":[{"name":"1-O-(indol-3-yl)acetyl-beta-D-glucose:myo-inositol (indol-3-yl)acetyltransferase activity","type":"related"},{"name":"1-O-(indol-3-ylacetyl)-beta-D-glucose:myo-inositol indole-3-ylacetyltransferase activity","type":"related"},{"name":"indole-3-acetyl-beta-1-D-glucoside:myo-inositol indoleacetyltransferase activity","type":"related"}],"termid":"GO:0047194"}


id: PBO:0066500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin, lipid raft linker 1 pseudogene 1","termid":"PBO:0066500"}


id: PBO:0076925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 1","termid":"PBO:0076925"}


id: PBO:0044292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 1","termid":"PBO:0044292"}


id: PBO:0068367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 150","termid":"PBO:0068367"}


id: GO:0007214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to its receptor on the surface of a target cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid signaling pathway","synonyms":[{"name":"4-aminobutanoate signaling pathway","type":"exact"},{"name":"4-aminobutanoate signalling pathway","type":"exact"},{"name":"4-aminobutyrate signaling pathway","type":"exact"},{"name":"4-aminobutyrate signalling pathway","type":"exact"},{"name":"GABA signaling pathway","type":"exact"},{"name":"GABA signalling pathway","type":"exact"},{"name":"gamma-aminobutyric acid signalling pathway","type":"exact"}],"termid":"GO:0007214"}


id: GO:0019972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-12.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 binding","synonyms":[{"name":"IL-12 binding","type":"exact"}],"termid":"GO:0019972"}


id: PBO:0028101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alcohol_dehydrogenase_activity","termid":"PBO:0028101"}


id: SO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig of BAC reads.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"},{"relation_name":"part_of","term_name":"BAC","termid":"SO:0000153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_read_contig","synonyms":[{"name":"BAC read contig","type":"exact"}],"termid":"SO:0001866"}


id: GO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of veins of the heart are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vein morphogenesis","termid":"GO:0003169"}


id: PBO:0036436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion protein for conjugation Map4","termid":"PBO:0036436"}


id: PBO:0075330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SON DNA and RNA binding protein","termid":"PBO:0075330"}


id: PBO:0030966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation","termid":"PBO:0030966"}


id: FYPO:0008062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding to the chromatin central core by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PMID:15908586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased chromatin binding at centromere central core","termid":"FYPO:0008062"}


id: GO:0008115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + sarcosine = formaldehyde + glycine + H2O2.","definition_xrefs":["EC:1.5.3.1","RHEA:13313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sarcosine oxidase activity","secondary_identifiers":["MetaCyc:SARCOX-RXN","KEGG_REACTION:R00610"],"synonyms":[{"name":"sarcosine:oxygen oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0008115"}


id: PBO:0066369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 12","termid":"PBO:0066369"}


id: PBO:0091038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase Ecm31","termid":"PBO:0091038"}


id: PBO:0059378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 3","termid":"PBO:0059378"}


id: PBO:0072449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 13","termid":"PBO:0072449"}


id: PBO:0082896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin for the Sgv1p (Bur1p) protein kinase; subunit of the CDK-cyclin BUR kinase complex with Sgv1p (Bur2p); regulates Set2p-dependent H3K36 trimethylation; regulates transcriptional elongation through the phosphorylation of the carboxy-terminal domain (CTD) of Rpo21p; involved in the recruitment of Spt6p to the CTD at the onset of transcription; regulates telomere elongation","termid":"PBO:0082896"}


id: PBO:0056043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor tyrosine kinase","termid":"PBO:0056043"}


id: PBO:0069239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 494, pseudogene","termid":"PBO:0069239"}


id: PATO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a insect by virtue of the bearer's being in the chrysalis (cocoon) or post larval stage.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pupal","termid":"PATO:0001187"}


id: GO:1903437
data:
  {"annotated_genes":["SJAG_03048","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cytokinesis","termid":"GO:1902413"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"negatively_regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"negative regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic cytokinetic process","type":"exact"},{"name":"down-regulation of mitotic cytokinetic process","type":"exact"},{"name":"downregulation of mitotic cytokinetic process","type":"exact"},{"name":"inhibition of mitotic cytokinetic process","type":"narrow"}],"termid":"GO:1903437","terms_by_termid":{"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: GO:0046312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphoarginine, a phosphorylated derivative of the amino acid arginine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoarginine metabolic process","termid":"GO:0006604"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"phosphoarginine biosynthetic process","synonyms":[{"name":"phosphoarginine anabolism","type":"exact"},{"name":"phosphoarginine biosynthesis","type":"exact"},{"name":"phosphoarginine formation","type":"exact"},{"name":"phosphoarginine synthesis","type":"exact"}],"termid":"GO:0046312"}


id: GO:0050183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-oleoyl-sn-glycero-3-phosphocholine + H+ + NADH + O2 = 1-acyl-2-[(S)-12-hydroxyoleoyl]-sn-glycero-3-phosphocholine + H2O + NAD+.","definition_xrefs":["RHEA:46360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine 12-monooxygenase activity","secondary_identifiers":["EC:1.14.18.4","KEGG_REACTION:R03476","MetaCyc:PHOSPHATIDYLCHOLINE-12-MONOOXYGENASE-RXN"],"synonyms":[{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine,NADH:oxygen oxidoreductase (12-hydroxylating)","type":"related"},{"name":"oleate D12-hydroxylase activity","type":"exact"},{"name":"oleate Delta(12)-hydroxylase activity","type":"related"},{"name":"oleate delta12-hydroxylase activity","type":"related"},{"name":"oleate delta12-monooxygenase activity","type":"related"},{"name":"ricinoleic acid synthase activity","type":"related"}],"termid":"GO:0050183"}


id: GO:0043433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"regulation of DNA-binding transcription factor activity","termid":"GO:0051090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA-binding transcription factor activity","secondary_identifiers":["GO:1904168","GO:2000824"],"synonyms":[{"name":"down regulation of transcription factor activity","type":"exact"},{"name":"down-regulation of transcription factor activity","type":"exact"},{"name":"downregulation of transcription factor activity","type":"exact"},{"name":"inhibition of transcription factor activity","type":"narrow"},{"name":"negative regulation of DNA binding transcription factor activity","type":"exact"},{"name":"negative regulation of androgen receptor activity","type":"narrow"},{"name":"negative regulation of sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"negative regulation of thyroid hormone receptor activity","type":"narrow"},{"name":"negative regulation of transcription factor activity","type":"broad"}],"termid":"GO:0043433"}


id: GO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenosine)(out) + Na+(out) = (pyrimidine nucleoside or adenosine)(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"},{"relation_name":"is_a","term_name":"nucleoside:sodium symporter activity","termid":"GO:0005415"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyrimidine- and adenosine-specific:sodium symporter activity","synonyms":[{"name":"pyrimidine- and adenine-specific:sodium symporter activity","type":"related"}],"termid":"GO:0015389"}


id: PBO:0052011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 1C","termid":"PBO:0052011"}


id: GO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the green fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a serine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0184"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-seryl-5-imidazolinone glycine (obsolete GO:0018252)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0018252"}


id: PBO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 9 pseudogene","termid":"PBO:0050930"}


id: PBO:0074226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC45A4 antisense RNA 1","termid":"PBO:0074226"}


id: PBO:0042629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 4 pseudogene","termid":"PBO:0042629"}


id: PBO:0030258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_localization","termid":"PBO:0030258"}


id: GO:0102343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxyicosanoyl-CoA = trans-2-icosenoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-arachidoyl-CoA dehydratase activity (obsolete GO:0102343)","termid":"GO:0102343"}


id: PBO:0091640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing","termid":"PBO:0091640"}


id: PBO:0080124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 2","termid":"PBO:0080124"}


id: PBO:0067120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 165, pseudogene","termid":"PBO:0067120"}


id: PBO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-11","termid":"PBO:0051137"}


id: PBO:0066554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17 pseudogene 1","termid":"PBO:0066554"}


id: GO:1905810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["GOC:TermGenie","PMID:27779093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of excitatory synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905810"}


id: PBO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 21, pseudogene","termid":"PBO:0060584"}


id: GO:0016531
data:
  {"annotated_genes":["SJAG_04553","SJAG_03296","SJAG_00449","SJAG_03231","SJAG_04403"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85264,89332,98309,100895,103676],"is_not":false,"summary":null,"term":"GO:0016531"},{"annotations":[89334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Directly binding to and delivering copper ions to a target protein.","definition_xrefs":["PMID:10790544","PMID:11739376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_04403":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"copper chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016531","terms_by_termid":{"GO:0016531":null,"GO:0016532":null}}


id: PBO:0001466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconokinase","termid":"PBO:0001466"}


id: PBO:0030130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_potassium_level","termid":"PBO:0030130"}


id: GO:0010287
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.","definition_xrefs":["GOC:tair_curators","PMID:16461379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastoglobule","secondary_identifiers":["GO:0010502"],"synonyms":[{"name":"PG","type":"exact"},{"name":"plastoglobuli","type":"exact"}],"termid":"GO:0010287"}


id: PBO:0086707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the multi-drug and toxin extrusion (MATE) family of the multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily","termid":"PBO:0086707"}


id: PBO:0054321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1713","termid":"PBO:0054321"}


id: GO:1900341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from formic acid","termid":"GO:1900339"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from formic acid","synonyms":[{"name":"activation of methane biosynthetic process from formic acid","type":"narrow"},{"name":"up regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"up-regulation of methane biosynthetic process from formic acid","type":"exact"},{"name":"upregulation of methane biosynthetic process from formic acid","type":"exact"}],"termid":"GO:1900341"}


id: PBO:0084732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; transports oxaloacetate, sulfate, thiosulfate, and isopropylmalate; member of the mitochondrial carrier family","termid":"PBO:0084732"}


id: PBO:0034790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Hfi1/Ada1","termid":"PBO:0034790"}


id: PBO:0060165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 13 (pseudogene)","termid":"PBO:0060165"}


id: PBO:0006179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulator","termid":"PBO:0006179"}


id: GO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure involved in coupling stereocilia to one another in sensory hair cells There are four morphologically distinct types: tip links, horizontal top connectors, shaft connectors and ankle links. Tip links and horizontal top connectors are the only inter-stereocilia links associated with mature cochlea, whereas ankle links appear during development of the auditory hair bundle.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia coupling link","termid":"GO:0002139"}


id: PBO:0011104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Bro1 (predicted)","termid":"PBO:0011104"}


id: GO:0016776
data:
  {"annotated_genes":["SJAG_02887","SJAG_04282","SJAG_04657","SJAG_04849","SJAG_03798","SJAG_02038","SJAG_02321","SJAG_02421","SJAG_02420","SJAG_01474","SJAG_00244","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94329,114750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[111751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004127"},{"annotations":[98425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[114957,111236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000829"},{"annotations":[111237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052723"},{"annotations":[111238,114958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000828"},{"annotations":[114959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000827"},{"annotations":[96251,114171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004550"},{"annotations":[109790,109796,112204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008972"},{"annotations":[92793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004631"},{"annotations":[114172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[111752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"},{"annotations":[114173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009041"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00779":null,"SJAG_01474":null,"SJAG_02038":null,"SJAG_02321":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02887":null,"SJAG_03798":null,"SJAG_04282":null,"SJAG_04657":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphotransferase activity, phosphate group as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.4.-"],"termid":"GO:0016776","terms_by_termid":{"GO:0000827":null,"GO:0000828":null,"GO:0000829":null,"GO:0004017":null,"GO:0004127":null,"GO:0004385":null,"GO:0004550":null,"GO:0004631":null,"GO:0004798":null,"GO:0008972":null,"GO:0009041":null,"GO:0033862":null,"GO:0052723":null}}


id: MOD:01012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxidizes the disulfide bond of a cystine crosslink to form two cysteic acid residues.","definition_xrefs":["DeltaMass:335"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-cystine (cross-link)","termid":"MOD:00034"},{"relation_name":"is_a","term_name":"L-cysteic acid (L-cysteine sulfonic acid)","termid":"MOD:00460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of disulfide crosslink in cystine to two cysteic acids","termid":"MOD:01012"}


id: PBO:0087136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p); complex interacts with exosome to mediate 3'-end formation of some mRNAs, snRNAs, snoRNAs, and CUTs; required for termination of non-poly(A) transcripts and efficient splicing; Nrd1-Nab3 pathway appears to have a role in rapid suppression of some genes when cells are shifted to poor growth conditions, indicating role for Nrd1-Nab3 in regulating cellular response to nutrient availability","termid":"PBO:0087136"}


id: GO:0005770
data:
  {"annotated_genes":["SJAG_04616","SJAG_03050","SJAG_00181","SJAG_04643","SJAG_03347","SJAG_04023","SJAG_03783","SJAG_07012","SJAG_01488","SJAG_02049","SJAG_02516","SJAG_00287","SJAG_02429","SJAG_01324","SJAG_00173","SJAG_01039","SJAG_04359","SJAG_01981","SJAG_04349","SJAG_01309","SJAG_01088","SJAG_04024","SJAG_04047","SJAG_03976","SJAG_03892","SJAG_00380","SJAG_05210","SJAG_02432","SJAG_00204","SJAG_02100","SJAG_04513","SJAG_05207","SJAG_04489","SJAG_03072","SJAG_04552","SJAG_03131","SJAG_01242","SJAG_03848","SJAG_03137","SJAG_01379","SJAG_00900","SJAG_00416"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73772,85545,86406,88518,95051,95685,95885,95941,97297,97626,98311,98519,100249,101256,104876,105842,106459,107084,107448,113696,114547],"is_not":false,"summary":null,"term":"GO:0005770"},{"annotations":[93828],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031906"},{"annotations":[93856,95686,105991,97261,106001,84372,88200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031902"},{"annotations":[110629,111055,99330,99916,101931,115666,84205,84857,102744,109500,97070,94154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005771"},{"annotations":[115668,88317,90123],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090702","PMID:11964142","PMID:2557062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00287":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00900":null,"SJAG_01039":null,"SJAG_01088":null,"SJAG_01242":null,"SJAG_01309":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01488":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02432":null,"SJAG_02516":null,"SJAG_03050":null,"SJAG_03072":null,"SJAG_03131":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04349":null,"SJAG_04359":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04552":null,"SJAG_04616":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"late endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32109380":null},"synonyms":[{"name":"PVC","type":"broad"},{"name":"prevacuolar compartment","type":"exact"}],"termid":"GO:0005770","terms_by_termid":{"GO:0005770":null,"GO:0005771":null,"GO:0031902":null,"GO:0031906":null,"GO:0032585":null}}


id: GO:0033413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"UGU codon-amino acid adaptor activity","synonyms":[{"name":"TGT codon-amino acid adaptor activity","type":"exact"},{"name":"cysteine tRNA","type":"related"}],"termid":"GO:0033413"}


id: GO:0061841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which transports ferrous iron (Fe(III) or Fe3+) ions from the vacuole, the main storage component of intracellular free iron, into the cytoplasm in a low iron environment.","definition_xrefs":["GOC:bhm","PMID:10608875","PMID:9413439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"is_a","term_name":"ferroxidase complex","termid":"GO:1905862"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773","GO:0032991"],"is_obsolete":false,"name":"high-affinity iron exporter complex","synonyms":[{"name":"FET5-FTH1 high affinity iron exporter complex","type":"narrow"},{"name":"FET5-FTH1 high-affinity iron exporter complex","type":"narrow"},{"name":"high affinity iron exporter complex","type":"exact"}],"termid":"GO:0061841"}


id: GO:0031365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the N-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid modification","secondary_identifiers":["GO:0018409"],"synonyms":[{"name":"peptide or protein amino-terminal blocking","type":"related"},{"name":"peptide/protein amino-terminal blocking","type":"related"}],"termid":"GO:0031365"}


id: PBO:0030733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_upon_G0_to_G1_transition","termid":"PBO:0030733"}


id: GO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine via the intermediates alpha-aminoadipic acid and saccharopine. This pathway is used by yeast and fungi to synthesize the essential amino acid L-lysine, and pathway intermediates are often incorporated into secondary metabolic processes. The pathway proceeds as follows: alpha-ketoglutarate is converted to homocitrate, which is metabolized to 3-carboxyhex-2-enedioate and then homoisocitrate. This is then decarboxylated to form alpha-ketoadipate, which is then converted to alpha-aminoadipate. This is then reduced to form alpha-aminoadipate 6-semialdehyde, which is metabolized to saccharopine and finally L-lysine.","definition_xrefs":["MetaCyc:LYSINE-AMINOAD-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:0051975"}


id: GO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron. The pathway is induced in response to a stimulus indicating endoplasmic reticulum (ER) stress, and ends when the execution phase of apoptosis is triggered. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["GOC:bf","PMID:21113145","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"},{"relation_name":"part_of","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","synonyms":[{"name":"ER stress-induced neuron apoptosis","type":"broad"},{"name":"ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"endoplasmic reticulum stress-induced neuron apoptosis","type":"broad"},{"name":"endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036483"}


id: PBO:0083955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication","termid":"PBO:0083955"}


id: PBO:0069629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 906, pseudogene","termid":"PBO:0069629"}


id: GO:0140341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:10029989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140303","GO:0005215"],"is_obsolete":false,"name":"phosphatidylethanolamine floppase activity","synonyms":[{"name":"phosphatidylethanolamine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"}],"termid":"GO:0140341"}


id: PBO:0050528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin","termid":"PBO:0050528"}


id: PR:O59759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1020.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.05","synonyms":[{"name":"Spom972h-SPCC1020.05","type":"exact"}],"termid":"PR:O59759"}


id: GO:0008783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + H2O = putrescine + urea.","definition_xrefs":["EC:3.5.3.11","RHEA:13929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"agmatinase activity","secondary_identifiers":["MetaCyc:AGMATIN-RXN","Reactome:R-HSA-350604","KEGG_REACTION:R01157"],"synonyms":[{"name":"SpeB","type":"related"},{"name":"agmatine amidinohydrolase","type":"broad"},{"name":"agmatine ureohydrolase activity","type":"related"}],"termid":"GO:0008783"}


id: GO:0102222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: m+q H2O + a 6-phosphogluco-3-phosphogluco-amylopectin = m+q hydrogenphosphate + a 6-phosphogluco-3-phosphogluco-amylopectin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosophogluco-3-phosphogluco-starch phosphatase activity (obsolete GO:0102222)","secondary_identifiers":["MetaCyc:RXN-12218"],"termid":"GO:0102222"}


id: PBO:0047791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box E3","termid":"PBO:0047791"}


id: GO:0018894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern.","definition_xrefs":["UM-BBD_pathwayID:dpd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dibenzo-p-dioxin metabolic process","synonyms":[{"name":"dibenzo-p-dioxin metabolism","type":"exact"},{"name":"oxanthrene metabolic process","type":"exact"},{"name":"oxanthrene metabolism","type":"exact"},{"name":"phenodioxin metabolic process","type":"exact"},{"name":"phenodioxin metabolism","type":"exact"}],"termid":"GO:0018894"}


id: GO:0005506
data:
  {"annotated_genes":["SJAG_03943","SJAG_04054","SJAG_00309","SJAG_03862","SJAG_03018","SJAG_00792","SJAG_00642","SJAG_01418","SJAG_03509","SJAG_04016","SJAG_05311","SJAG_04297","SJAG_00221","SJAG_00717","SJAG_03225","SJAG_00532","SJAG_04743","SJAG_03222","SJAG_00827","SJAG_04913","SJAG_03658"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85889,88008,90274,95040,97718,99591,99982,100949,103569,103725,106066,107908,108629,108734,108993,110590,113518],"is_not":false,"summary":null,"term":"GO:0005506"},{"annotations":[110075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[100926,110076,97405,96752,89160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"}]},"cv_name":"molecular_function","definition":"Binding to an iron (Fe) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00532":null,"SJAG_00642":null,"SJAG_00717":null,"SJAG_00792":null,"SJAG_00827":null,"SJAG_01418":null,"SJAG_03018":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03509":null,"SJAG_03658":null,"SJAG_03862":null,"SJAG_03943":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04297":null,"SJAG_04743":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"iron ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"iron binding","type":"exact"}],"termid":"GO:0005506","terms_by_termid":{"GO:0005506":null,"GO:0008198":null,"GO:0008199":null}}


id: FYPO:0002337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location, is elongated, and is inviable.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized nucleus","termid":"FYPO:0006339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"elongated inviable vegetative cell, with mislocalized mononucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"inviable elongated mononucleate cell with displaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate cell with misplaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with asymmetrically localized nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell with mislocalized nucleus","type":"exact"}],"termid":"FYPO:0002337"}


id: PR:Q9US04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyltranspeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00702","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.09","secondary_identifiers":["UniProtKB:Q9US04"],"synonyms":[{"name":"Spom972h-GGT1","type":"exact"},{"name":"gamma-glutamyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US04"}


id: PATO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant temperature","termid":"PATO:0001314"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of temperature","synonyms":[{"name":"low variability of temperature","type":"exact"}],"termid":"PATO:0001307"}


id: GO:0039700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral primary envelope with the host outer nuclear membrane during nuclear egress. The transitory primary envelope is acquired by the virus as it buds at the inner nuclear membrane and gains access to the perinuclear space. This membrane is lost by fusing with the host outer nuclear membrane during nuclear exit.","definition_xrefs":["UniProtKB-KW:KW-1181","PMID:23057731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"exit of virus from host cell nucleus by nuclear egress","termid":"GO:0046802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion of viral membrane with host outer nuclear membrane","synonyms":[{"name":"fusion of viral membrane with host outer nuclear membrane involved in nuclear egress","type":"exact"},{"name":"viral primary envelope fusion with host outer nuclear membrane","type":"exact"}],"termid":"GO:0039700"}


id: PATO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000284 germ line dependent fertility (obsolete PATO:0000284)","termid":"PATO:0000284"}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: GO:0062147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + chloride + H+ + L-lysine + O2 = 4-chloro-L-lysine + CO2 + H2O + succinate.","definition_xrefs":["PMID:30867596","RHEA:59884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-lysine 4-chlorinase activity","termid":"GO:0062147"}


id: FYPO:0003717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton during vegetative growth","termid":"FYPO:0004739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003717"}


id: FYPO:0006697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular methionine level","synonyms":[{"name":"increased cellular L-methionine level","type":"exact"},{"name":"increased cellular methionine level during mitotic cell cycle","type":"related"},{"name":"increased cellular methionine level during vegetative growth","type":"exact"},{"name":"increased level of methionine in cell","type":"exact"},{"name":"induced cellular methionine level","type":"exact"}],"termid":"FYPO:0006697"}


id: PBO:0067792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 94","termid":"PBO:0067792"}


id: PBO:0070756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 12","termid":"PBO:0070756"}


id: PBO:0063575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and glutamate rich with coiled coil 1","termid":"PBO:0063575"}


id: PBO:0017692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1 (predicted)","termid":"PBO:0017692"}


id: PBO:0065271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 33","termid":"PBO:0065271"}


id: PBO:0031291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_growth_phenotype","termid":"PBO:0031291"}


id: PBO:0049909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXA antisense RNA 1","termid":"PBO:0049909"}


id: PBO:0000360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA, poly(A)-bearing (predicted)","termid":"PBO:0000360"}


id: PBO:0075990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stanniocalcin 2","termid":"PBO:0075990"}


id: PBO:0065871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB27B, member RAS oncogene family","termid":"PBO:0065871"}


id: GO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the late distal convoluted tubule over time, from its formation to the mature structure. The late distal convoluted tubule contains DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late distal convoluted tubule development","termid":"GO:0072068"}


id: PATO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000109 water sensitivity (obsolete PATO:0000109)","termid":"PATO:0000109"}


id: GO:0050415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoyl-L-glutamate + H2O = L-glutamate + formamide.","definition_xrefs":["EC:3.5.3.8","RHEA:22492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formimidoylglutamase activity","secondary_identifiers":["KEGG_REACTION:R02285","MetaCyc:FORMIMINOGLUTAMASE-RXN"],"synonyms":[{"name":"N-formimidoyl-L-glutamate formimidoylhydrolase activity","type":"related"},{"name":"N-formimino-L-glutamate formiminohydrolase activity","type":"related"},{"name":"N-formiminoglutamate hydrolase activity","type":"related"},{"name":"formiminoglutamase activity","type":"exact"},{"name":"formiminoglutamate hydrolase activity","type":"related"}],"termid":"GO:0050415"}


id: PBO:0072178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 5","termid":"PBO:0072178"}


id: PBO:0082165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylosuccinate synthase; catalyzes the first step in synthesis of adenosine monophosphate from inosine 5'monophosphate during purine nucleotide biosynthesis; exhibits binding to single-stranded autonomously replicating (ARS) core sequence","termid":"PBO:0082165"}


id: GO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mannosyl-diinositol phosphorylceramide + H2O = C26-phytoceramide + mannosyldiphosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphorylceramide phospholipase activity","termid":"GO:0052713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"mannosyl-diinositol phosphorylceramide phospholipase activity","termid":"GO:0052715"}


id: PBO:0090768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III assembly protein Cbp6","termid":"PBO:0090768"}


id: PBO:0040127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 13","termid":"PBO:0040127"}


id: PBO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) kinase Pkp1 (predicted)","termid":"PBO:0001677"}


id: GO:2000238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"regulation of tRNA export from nucleus","synonyms":[{"name":"regulation of tRNA export from cell nucleus","type":"exact"},{"name":"regulation of tRNA export out of nucleus","type":"exact"},{"name":"regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000238"}


id: GO:0006784
data:
  {"annotated_genes":["SJAG_03173","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89388,105732],"is_not":false,"summary":null,"term":"GO:0006784"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme A, a derivative of heme found in cytochrome aa3.","definition_xrefs":["PMID:11788607","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme a metabolic process","termid":"GO:0046160"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03173":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme A biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"haem A biosynthesis","type":"exact"},{"name":"haem A biosynthetic process","type":"exact"},{"name":"heme A anabolism","type":"exact"},{"name":"heme A biosynthesis","type":"exact"},{"name":"heme A formation","type":"exact"},{"name":"heme A synthesis","type":"exact"}],"termid":"GO:0006784","terms_by_termid":{"GO:0006784":null}}


id: GO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"platelet activating factor metabolic process","synonyms":[{"name":"PAF metabolic process","type":"exact"},{"name":"PAF metabolism","type":"exact"},{"name":"platelet activating factor metabolism","type":"exact"}],"termid":"GO:0046469"}


id: PBO:0039158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 5","termid":"PBO:0039158"}


id: GO:0001732
data:
  {"annotated_genes":["SJAG_04981","SJAG_02628","SJAG_02390","SJAG_02376","SJAG_03147","SJAG_04744","SJAG_02164","SJAG_02995","SJAG_04891","SJAG_00662","SJAG_03472","SJAG_04900"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86170,90985,92070,93052,93929,93989,95117,96278,101499,101791,106898,107531],"is_not":false,"summary":null,"term":"GO:0001732"}]},"cv_name":"biological_process","definition":"Joining of the large ribosomal subunit with the translation preinitiation complex, with release of IF2/eIF2 and IF3/eIF3 or IF5B/eIF5B. This leaves the functional ribosome at the AUG, with the methionyl/formyl-methionyl-tRNA positioned at the P site.","definition_xrefs":["PMID:29735639","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_02164":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0002181","GO:0044085","GO:0065003","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"formation of cytoplasmic translation initiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic translation initiation complex assembly","type":"exact"},{"name":"formation of translation initiation complex","type":"broad"},{"name":"translation initiation complex assembly","type":"broad"}],"termid":"GO:0001732","terms_by_termid":{"GO:0001732":null}}


id: FYPO:0006171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation takes place during anaphase A. Normally, the spindle elongates immediately following assembly during prophase, remains at a static length during metaphase and anaphase A, and elongates further during anaphase B.","definition_xrefs":["PomBase:mah","PMID:9802907","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic spindle elongation","termid":"FYPO:0005417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000337","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"mitotic spindle elongation during anaphase A","synonyms":[{"name":"abnormal mitotic spindle elongation during anaphase A","type":"exact"},{"name":"mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"mitotic spindle extension during anaphase A","type":"exact"},{"name":"premature mitotic spindle elongation during anaphase","type":"related"},{"name":"spindle elongation during anaphase A during mitotic cell cycle","type":"related"},{"name":"spindle elongation during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0006171"}


id: PBO:0052941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 25-1","termid":"PBO:0052941"}


id: PBO:0066037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 6","termid":"PBO:0066037"}


id: GO:0048665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate specification","termid":"GO:0048665"}


id: GO:0034192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-galactonate, the anion of D-galactonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-galactonate metabolic process","synonyms":[{"name":"D-galactonate metabolism","type":"exact"}],"termid":"GO:0034192"}


id: GO:0030729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + ATP + CoA = acetoacetyl-CoA + AMP + diphosphate + H+.","definition_xrefs":["RHEA:16117","EC:6.2.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acetoacetate-CoA ligase activity","secondary_identifiers":["MetaCyc:ACETOACETATE--COA-LIGASE-RXN","KEGG_REACTION:R01357","Reactome:R-HSA-5694494"],"synonyms":[{"name":"acetoacetate:CoA ligase (AMP-forming)","type":"related"},{"name":"acetoacetyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0030729"}


id: GO:0099010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of postsynaptic structure","synonyms":[{"name":"synapse remodelling","type":"broad"}],"termid":"GO:0099010"}


id: GO:0030039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA unwinding factor (obsolete GO:0030039)","synonyms":[{"name":"DNA unwinding factor","type":"exact"}],"termid":"GO:0030039"}


id: PBO:0034032
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_message_for_curators","termid":"PBO:0034032"}


id: PBO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase","termid":"PBO:0002014"}


id: PBO:0062958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 1","termid":"PBO:0062958"}


id: GO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an aryl hydrocarbon and transmitting the signal to initiate a change in cell activity. The aryl hydrocarbon receptor is a ligand-activated transcription factor which translocates to the nucleus to activate transcription upon ligand-binding.","definition_xrefs":["Wikipedia:Aryl_hydrocarbon_receptor","GOC:ai","PMID:1325649","PMID:7493958"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor activity (obsolete GO:0004874)","termid":"GO:0004874"}


id: PBO:0056451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 3","termid":"PBO:0056451"}


id: PBO:0045169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 3","termid":"PBO:0045169"}


id: GO:0150053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a climbing fiber onto the dendrites of a Purkinje cell in cerebellum. The climbing fiber originates from the inferior olivary nucleus of the medulla oblongata.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:19597563","PMID:23811844","PMID:5044254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar climbing fiber to Purkinje cell synapse","synonyms":[{"name":"cerebellar climbing fibre to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150053"}


id: SO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000064 gene_by_transcript_attribute (obsolete SO:0000064)","termid":"SO:0000064"}


id: GO:0046641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"positively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of alpha-beta T cell proliferation","synonyms":[{"name":"activation of alpha-beta T cell proliferation","type":"narrow"},{"name":"positive regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"positive regulation of alpha-beta T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of alpha-beta T cell proliferation","type":"narrow"},{"name":"up regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"up-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"upregulation of alpha-beta T cell proliferation","type":"exact"}],"termid":"GO:0046641"}


id: FYPO:0004918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity does not occur.","definition_xrefs":["PMID:11402029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished positive regulation of protein kinase activity","synonyms":[{"name":"abolished activation of protein kinase activity","type":"narrow"},{"name":"abolished positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"abolished positive regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"positive regulation of protein kinase activity abolished","type":"exact"}],"termid":"FYPO:0004918"}


id: PBO:0050966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon production regulator","termid":"PBO:0050966"}


id: PBO:0065882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB32, member RAS oncogene family","termid":"PBO:0065882"}


id: GO:0015723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bilirubin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"bilirubin transport","termid":"GO:0015723"}


id: PR:Q9UR07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-11 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.17","synonyms":[{"name":"Spom972h-Tf2-11","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR07"}


id: PBO:0112182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional GLNase (glutamine amidotransferase)/CPSase (carbamoylphosphate synthetase)/ATCase (aspartate transcarbamoylase) Ura1","termid":"PBO:0112182"}


id: FYPO:0004818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of transfer RNA genes measured in a cell is lower than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased antisense RNA level","termid":"FYPO:0004816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased tDNA antisense small RNA level","synonyms":[{"name":"decreased accumulation of tDNA antisense small RNAs","type":"related"},{"name":"decreased antisense small RNA at tDNA","type":"exact"},{"name":"decreased antisense transcription-derived small RNA level at tDNA","type":"exact"},{"name":"decreased tDNA antisense small RNA accumulation","type":"related"},{"name":"decreased tDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased tDNA antisense small RNA level during vegetative growth","type":"exact"},{"name":"reduced tDNA antisense small RNA level","type":"exact"}],"termid":"FYPO:0004818"}


id: PBO:0067223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 292, pseudogene","termid":"PBO:0067223"}


id: PBO:0052590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 1","termid":"PBO:0052590"}


id: PBO:0086528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YPR014C is not an essential gene","termid":"PBO:0086528"}


id: GO:2000758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein acetylation","termid":"GO:1901985"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"positively_regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-lysine acetylation","termid":"GO:2000758"}


id: PBO:0043026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2A","termid":"PBO:0043026"}


id: PBO:0091009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth2","termid":"PBO:0091009"}


id: FYPO:0002162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cilofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to cilofungin","synonyms":[{"name":"resistance to cilofungin during mitotic cell cycle","type":"related"},{"name":"resistance to cilofungin during vegetative growth","type":"exact"},{"name":"resistant to cilofungin","type":"exact"}],"termid":"FYPO:0002162"}


id: GO:0006611
data:
  {"annotated_genes":["SJAG_01805","SJAG_00753","SJAG_04472","SJAG_04400","SJAG_01358","SJAG_01245","SJAG_04312","SJAG_03836","SJAG_00375","SJAG_01534","SJAG_04366","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87292,89363,92706,97333,104662,105794,113546,113824],"is_not":false,"summary":null,"term":"GO:0006611"},{"annotations":[107206,98034,96621,90013],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"The directed movement of a protein from the nucleus into the cytoplasm.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00375":null,"SJAG_00753":null,"SJAG_01245":null,"SJAG_01358":null,"SJAG_01534":null,"SJAG_01805":null,"SJAG_03836":null,"SJAG_04312":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04464":null,"SJAG_04472":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097349"],"synonyms":[{"name":"copper-induced protein export from nucleus","type":"related"},{"name":"protein export from cell nucleus","type":"exact"},{"name":"protein export out of nucleus","type":"exact"},{"name":"protein transport from nucleus to cytoplasm","type":"exact"},{"name":"protein-nucleus export","type":"exact"}],"termid":"GO:0006611","terms_by_termid":{"GO:0006611":null,"GO:0046827":null}}


id: GO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antennal joint are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"antennal joint development","termid":"GO:0048098"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint morphogenesis","termid":"GO:0048801"}


id: PBO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 4","termid":"PBO:0043804"}


id: PBO:0055858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 5","termid":"PBO:0055858"}


id: PBO:0026674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0026674"}


id: PBO:0051329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-23 (pseudogene)","termid":"PBO:0051329"}


id: PBO:0072019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 6","termid":"PBO:0072019"}


id: GO:0005351
data:
  {"annotated_genes":["SJAG_04068","SJAG_02958","SJAG_03608","SJAG_03606","SJAG_03960","SJAG_03820","SJAG_04905","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72205,75437,88695,99171,106849,110356,110363,113365],"is_not":false,"summary":null,"term":"GO:0005351"},{"annotations":[113369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[91973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[91974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: carbohydrate(out) + H+(out) = carbohydrate(in) + H+(in).","definition_xrefs":["TC:2.A.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"carbohydrate:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005403","GO:0015542"],"synonyms":[{"name":"cation/sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar transporter activity","type":"broad"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"},{"name":"proton:sugar symporter activity","type":"exact"},{"name":"sugar efflux transmembrane transporter activity","type":"narrow"},{"name":"sugar porter activity","type":"narrow"},{"name":"sugar transporter","type":"broad"},{"name":"sugar:hydrogen ion symporter activity","type":"narrow"},{"name":"sugar:hydrogen symporter activity","type":"exact"},{"name":"sugar:proton symporter activity","type":"narrow"}],"termid":"GO:0005351","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0008506":null}}


id: PBO:0091268
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(1)","termid":"PBO:0091268"}


id: PBO:0051727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor family member 2B","termid":"PBO:0051727"}


id: GO:0019895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to mitochondria.","definition_xrefs":["PMID:12495622"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated mitochondrial adaptor activity (obsolete GO:0019895)","termid":"GO:0019895"}


id: GO:0019956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine. Chemokines are a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["PMID:12183377","GOC:rl","GOC:BHF","GOC:ai","Wikipedia:Chemokine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chemokine binding","termid":"GO:0019956"}


id: FYPO:0000735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000120","FYPO:0000002","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"short meiotic spindle","synonyms":[{"name":"decreased meiotic spindle length","type":"exact"},{"name":"short meiotic spindles","type":"exact"},{"name":"short spindle during meiosis","type":"exact"}],"termid":"FYPO:0000735"}


id: PBO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1","termid":"PBO:0047730"}


id: GO:0014900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A muscle system process that results in an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle hyperplasia","termid":"GO:0014900"}


id: PBO:0050320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 22","termid":"PBO:0050320"}


id: GO:0048892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line nerve over time, form its formation to the mature structure. Lateral line nerves project primarily to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve development","synonyms":[{"name":"nLL development","type":"exact"}],"termid":"GO:0048892"}


id: SO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K12_acetylation_site","synonyms":[{"name":"H4K12 acetylation site","type":"exact"},{"name":"H4K12ac","type":"exact"}],"termid":"SO:0001939"}


id: GO:0160106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(9) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(9) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003824","GO:0016741","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"tRNA (adenine(9)-N1)-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6787594","RHEA:43148"],"synonyms":[{"name":"tRNA (adenine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA m(1)A(9)-methyltransferase","type":"exact"},{"name":"tRNA(m(1)G(9)/m(1)A(9))-methyltransferase","type":"exact"}],"termid":"GO:0160106"}


id: PBO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM167A antisense RNA 1","termid":"PBO:0047122"}


id: PBO:0047436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 7","termid":"PBO:0047436"}


id: GO:0046518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving octamethylcyclotetrasiloxane, a cyclic silicone-oxygen ring compound with two methyl groups attached to each silicone atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"octamethylcyclotetrasiloxane metabolic process","synonyms":[{"name":"octamethylcyclotetrasiloxane metabolism","type":"exact"}],"termid":"GO:0046518"}


id: PBO:0078146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 25","termid":"PBO:0078146"}


id: GO:0047584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-oxobutane-1,2,4-tricarboxylate = (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate + H2O.","definition_xrefs":["EC:4.2.1.83","RHEA:17401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-oxalmesaconate hydratase activity","secondary_identifiers":["KEGG_REACTION:R04478","MetaCyc:RXN-2463"],"synonyms":[{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase [(E)-4-oxobut-1-ene-1,2,4-tricarboxylate-forming]","type":"related"},{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxohexenedioate hydratase activity","type":"related"},{"name":"gamma-oxalmesaconate hydratase activity","type":"related"},{"name":"oxalmesaconate hydratase activity","type":"related"}],"termid":"GO:0047584"}


id: GO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transferase activity","synonyms":[{"name":"down regulation of transferase activity","type":"exact"},{"name":"down-regulation of transferase activity","type":"exact"},{"name":"downregulation of transferase activity","type":"exact"},{"name":"inhibition of transferase activity","type":"narrow"},{"name":"transferase inhibitor","type":"exact"}],"termid":"GO:0051348"}


id: GO:0035797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to tellurite [TeO3(2-)]. Methylated derivatives of tellurite include Te(CH3)2 (dimethyltelluride) and Te2(CH3)2 (dimethylditelluride).","definition_xrefs":["PMID:11053398","GOC:bf","PMID:21244361","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tellurite methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine-dependent tellurite methyltransferase activity","type":"exact"},{"name":"SAM-dependent tellurite methyltransferase activity","type":"exact"},{"name":"tellurite methylase activity","type":"broad"}],"termid":"GO:0035797"}


id: SO:1001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron found in tRNA that is spliced via endonucleolytic cleavage and ligation rather than transesterification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease_spliced_intron","termid":"SO:0001216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_intron","synonyms":[{"name":"pre-tRNA intron","type":"exact"},{"name":"tRNA intron","type":"exact"}],"termid":"SO:1001272"}


id: PBO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 6","termid":"PBO:0080171"}


id: PBO:0043938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 2","termid":"PBO:0043938"}


id: GO:0140740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = ADP-riboxanated L-argininyl-[protein] + H+ + NH4(+) + nicotinamide.","definition_xrefs":["PMID:34671164","RHEA:69500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"},{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ADP-riboxanase activity","termid":"GO:0140740"}


id: PBO:0071755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 2","termid":"PBO:0071755"}


id: GO:0031619
data:
  {"annotated_genes":["SJAG_01224","SJAG_05019","SJAG_07002","SJAG_03926","SJAG_01805","SJAG_03698","SJAG_05295","SJAG_04259","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84068,86513,90000,94815,97512,104013,109979,111708,113227],"is_not":false,"summary":null,"term":"GO:0031619"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister centromeres and kinetochores of one chromosome are fused and orientated so the chromosomes attach to microtubules that emanate from the same spindle pole. This process ensures that homologous l chromosomes are segregated at anaphase of meiosis I.","definition_xrefs":["PMID:15062096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01805":null,"SJAG_03327":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_04259":null,"SJAG_05019":null,"SJAG_05295":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0051179","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"homologous chromosome orientation in meiotic metaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homologous chromosome orientation during meiosis","type":"related"},{"name":"homologous chromosome orientation during meiosis I","type":"related"}],"termid":"GO:0031619","terms_by_termid":{"GO:0031619":null}}


id: GO:0110027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA strand resection involved in replication fork processing.","definition_xrefs":["PMID:28475874","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110026"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110027"}


id: PBO:0089899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine-tRNA ligase","termid":"PBO:0089899"}


id: GO:0046252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products.","definition_xrefs":["GOC:ai","PMID:6508079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene biosynthetic process","synonyms":[{"name":"toluene anabolism","type":"exact"},{"name":"toluene biosynthesis","type":"exact"},{"name":"toluene formation","type":"exact"},{"name":"toluene synthesis","type":"exact"}],"termid":"GO:0046252"}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: PBO:0083341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene APM2/YHL019C","termid":"PBO:0083341"}


id: PBO:0005670
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.12","termid":"PBO:0005670"}


id: PBO:0081484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 366","termid":"PBO:0081484"}


id: PBO:0077368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 107","termid":"PBO:0077368"}


id: PBO:0030950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation","termid":"PBO:0030950"}


id: GO:0102880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = isobazzanene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"isobazzanene synthase activity","secondary_identifiers":["MetaCyc:RXN-8419"],"termid":"GO:0102880"}


id: GO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during intussusceptive angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"intussusceptive angiogenesis","termid":"GO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration involved in intussusceptive angiogenesis","termid":"GO:0002044"}


id: PBO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq4 (predicted)","termid":"PBO:0000662"}


id: GO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5A serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 5A serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5A receptor binding","type":"exact"},{"name":"type 5A serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031830"}


id: PBO:0055665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 2","termid":"PBO:0055665"}


id: PBO:0066813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 112","termid":"PBO:0066813"}


id: FYPO:0004864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is curved along the long axis, and contains interphase cytoplasmic microtubules that are longer than normal and curved. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0000004","FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"viable curved vegetative cell with long curved interphase microtubules","synonyms":[{"name":"curved viable cell with elongated curved interphase microtubules","type":"exact"},{"name":"viable curved cell with long curved interphase microtubules during vegetative growth","type":"exact"},{"name":"viable curved vegetative cell with long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"viable curved vegetative cell with long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"viable curved vegetative cell with long curved interphase microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004864"}


id: PBO:0091395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K48-linkage specific deubiquitinase","termid":"PBO:0091395"}


id: PBO:0027969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_diethyl_maleate","termid":"PBO:0027969"}


id: GO:1901239
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97846],"is_not":false,"summary":null,"term":"GO:1901239"}]},"cv_name":"molecular_function","definition":"Enables the transfer of malonate(1-) from one side of a membrane to the other.","definition_xrefs":["PMID:9128730","PMID:9573154","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"malonate(1-) transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901549","RHEA:33115"],"synonyms":[{"name":"malonic acid uptake transmembrane transporter activity","type":"related"}],"termid":"GO:1901239","terms_by_termid":{"GO:1901239":null}}


id: PBO:0056488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial antiviral signaling protein","termid":"PBO:0056488"}


id: PBO:0049171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAPL long non-coding downstream RNA","termid":"PBO:0049171"}


id: PBO:0077946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 6-1","termid":"PBO:0077946"}


id: GO:0098677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maturation of a virion after separation from the host cell. Not all viruses mature after separation. In those that do, maturation typically involves rearangement and/or cleavage of viral proteins, resulting in the virion becoming competent for reinfection.","definition_xrefs":["VZ:1946","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virus maturation","termid":"GO:0019075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion maturation","synonyms":[{"name":"viral particle maturation","type":"exact"},{"name":"virus particle maturation","type":"related"}],"termid":"GO:0098677"}


id: PBO:0089754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin 13","termid":"PBO:0089754"}


id: PBO:0089935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Shy1","termid":"PBO:0089935"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["EC:2.3.1.135","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"lecithin:11-cis retinol acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12563"],"termid":"GO:0102279"}


id: GO:1903300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexokinase activity.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000059","PMID:15804508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinase activity","termid":"GO:0033673"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of hexokinase activity","termid":"GO:1903299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexokinase activity","synonyms":[{"name":"down regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"down regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"down regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"down regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"down regulation of hexokinase D","type":"related"},{"name":"down regulation of hexokinase activity","type":"exact"},{"name":"down regulation of hexokinase type I activity","type":"narrow"},{"name":"down regulation of hexokinase type II activity","type":"narrow"},{"name":"down regulation of hexokinase type III activity","type":"narrow"},{"name":"down regulation of hexokinase type IV","type":"related"},{"name":"down regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"down regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"down-regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"down-regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"down-regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"down-regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"down-regulation of hexokinase D","type":"related"},{"name":"down-regulation of hexokinase activity","type":"exact"},{"name":"down-regulation of hexokinase type I activity","type":"narrow"},{"name":"down-regulation of hexokinase type II activity","type":"narrow"},{"name":"down-regulation of hexokinase type III activity","type":"narrow"},{"name":"down-regulation of hexokinase type IV","type":"related"},{"name":"down-regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"down-regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"downregulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"downregulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"downregulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"downregulation of hexokinase (phosphorylating)","type":"exact"},{"name":"downregulation of hexokinase D","type":"related"},{"name":"downregulation of hexokinase activity","type":"exact"},{"name":"downregulation of hexokinase type I activity","type":"narrow"},{"name":"downregulation of hexokinase type II activity","type":"narrow"},{"name":"downregulation of hexokinase type III activity","type":"narrow"},{"name":"downregulation of hexokinase type IV","type":"related"},{"name":"downregulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"downregulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"inhibition of ATP-dependent hexokinase activity","type":"narrow"},{"name":"inhibition of ATP:D-hexose 6-phosphotransferase activity","type":"narrow"},{"name":"inhibition of glucose ATP phosphotransferase activity","type":"narrow"},{"name":"inhibition of hexokinase (phosphorylating)","type":"narrow"},{"name":"inhibition of hexokinase D","type":"related"},{"name":"inhibition of hexokinase activity","type":"narrow"},{"name":"inhibition of hexokinase type I activity","type":"narrow"},{"name":"inhibition of hexokinase type II activity","type":"narrow"},{"name":"inhibition of hexokinase type III activity","type":"narrow"},{"name":"inhibition of hexokinase type IV","type":"related"},{"name":"inhibition of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"inhibition of hexokinase type IV glucokinase activity","type":"narrow"},{"name":"negative regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"negative regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"negative regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"negative regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"negative regulation of hexokinase D","type":"related"},{"name":"negative regulation of hexokinase type I activity","type":"narrow"},{"name":"negative regulation of hexokinase type II activity","type":"narrow"},{"name":"negative regulation of hexokinase type III activity","type":"narrow"},{"name":"negative regulation of hexokinase type IV","type":"related"},{"name":"negative regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"negative regulation of hexokinase type IV glucokinase activity","type":"exact"}],"termid":"GO:1903300"}


id: FYPO:0006646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of prometaphase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal duration of mitotic M phase","termid":"FYPO:0004310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of mitotic prometaphase","synonyms":[{"name":"normal duration of mitotic prometaphase during vegetative growth","type":"exact"},{"name":"normal duration of prometaphase during mitotic cell cycle","type":"exact"},{"name":"normal duration of prometaphase of mitosis","type":"exact"}],"termid":"FYPO:0006646"}


id: PBO:0090525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1","termid":"PBO:0090525"}


id: PBO:0049807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 2","termid":"PBO:0049807"}


id: GO:0008713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heptosyl-KDO2-lipid A + ADP-L-glycero-beta-D-manno-heptose = heptosyl2-KDO2-lipid A + ADP + H+.","definition_xrefs":["MetaCyc:RXN0-5061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide heptosyltransferase activity","termid":"GO:0008920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"ADP-heptose-lipopolysaccharide heptosyltransferase activity","secondary_identifiers":["RHEA:28538"],"synonyms":[{"name":"ADP-heptose:LPS heptosyltransferase activity","type":"exact"}],"termid":"GO:0008713"}


id: GO:0006404
data:
  {"annotated_genes":["SJAG_03470"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98740],"is_not":false,"summary":null,"term":"GO:0006404"}]},"cv_name":"biological_process","definition":"The import of RNA from the cytoplasm to the nucleus.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"},{"relation_name":"is_a","term_name":"import into nucleus","termid":"GO:0051170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"RNA import into nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA import into cell nucleus","type":"exact"},{"name":"RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"RNA-nucleus import","type":"exact"}],"termid":"GO:0006404","terms_by_termid":{"GO:0006404":null}}


id: GO:1903975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell migration.","definition_xrefs":["PMID:19100238","GOC:nc","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell migration","synonyms":[{"name":"regulation of glia cell migration","type":"exact"}],"termid":"GO:1903975"}


id: PBO:0036208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0036208"}


id: GO:0032399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a HECT, 'Homologous to the E6-AP Carboxy-Terminus', domain of a protein.","definition_xrefs":["GOC:mah","Pfam:PF00632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"HECT domain binding","termid":"GO:0032399"}


id: PBO:0029927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GMP_binding","termid":"PBO:0029927"}


id: PBO:0088911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor, Tea1-interacting protein implicated in exocytosis","termid":"PBO:0088911"}


id: PBO:0091464
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChiTinaSe 2","termid":"PBO:0091464"}


id: SO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence that has been inserted and is being propagated by the clone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_insert","synonyms":[{"name":"clone insert","type":"exact"}],"termid":"SO:0000753"}


id: PATO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality that is the mixture, purity or pattern of wavelengths of light perceived by the observer.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatic property","termid":"PATO:0001301"}


id: GO:0007173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor EGFR (ERBB1) on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway","synonyms":[{"name":"EGF receptor signaling pathway","type":"exact"},{"name":"EGF receptor signalling pathway","type":"exact"},{"name":"EGFR signaling pathway","type":"exact"},{"name":"ERBB1 signaling pathway","type":"exact"},{"name":"epidermal growth factor receptor signalling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-1 signaling pathway","type":"exact"}],"termid":"GO:0007173"}


id: PBO:0078320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 2","termid":"PBO:0078320"}


id: GO:0003063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine released from vagus nerve endings binds to muscarinic receptors on the pacemaker cells and decreases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"},{"relation_name":"is_a","term_name":"negative regulation of heart rate","termid":"GO:0010459"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate by acetylcholine","synonyms":[{"name":"negative regulation of heart contraction rate by acetylcholine","type":"related"}],"termid":"GO:0003063"}


id: PBO:0030951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_mitochondrion_distribution","termid":"PBO:0030951"}


id: GO:2000847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"negatively_regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of corticosteroid hormone secretion","synonyms":[{"name":"negative regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000847"}


id: PBO:0061635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16","termid":"PBO:0061635"}


id: PBO:0084572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein localized to the shmoo tip; required for cell fusion; expression regulated by mating pheromone; proposed to coordinate signaling, fusion, and polarization events required for fusion; potential Cdc28p substrate","termid":"PBO:0084572"}


id: GO:0071495
data:
  {"annotated_genes":["SJAG_00082","SJAG_04183","SJAG_03048","SJAG_04140","SJAG_04332","SJAG_01837","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86229,98566,107394,112860,90012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[100343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[86234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90743,98579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to endogenous stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071495","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: PBO:0058605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6737","termid":"PBO:0058605"}


id: PBO:0027679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_translation","termid":"PBO:0027679"}


id: GO:0030960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of two peptidyl-tyrosines to form a 3'-(O4'-L-tyrosinyl)-L-tyrosine protein cross-link.","definition_xrefs":["PDB:1NGK","PMID:12719529","RESID:AA0368"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(O4'-L-tyrosinyl)-L-tyrosine (obsolete GO:0030960)","termid":"GO:0030960"}


id: PBO:0041655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 1","termid":"PBO:0041655"}


id: PBO:0044482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily B member 1","termid":"PBO:0044482"}


id: GO:0006565
data:
  {"annotated_genes":["SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99967],"is_not":false,"summary":null,"term":"GO:0006565"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-serine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SERDEG-PWY"],"synonyms":[{"name":"L-serine breakdown","type":"exact"},{"name":"L-serine catabolism","type":"exact"},{"name":"L-serine degradation","type":"exact"}],"termid":"GO:0006565","terms_by_termid":{"GO:0006565":null}}


id: FYPO:0005881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ophthalmic acid measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"ophthalmic acid absent from cell","synonyms":[{"name":"ophthalmic acid absent from cell during mitotic cell cycle","type":"related"},{"name":"ophthalmic acid absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005881"}


id: PBO:0039939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 2","termid":"PBO:0039939"}


id: FYPO:0002840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromosome during vegetative growth","synonyms":[{"name":"increased protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002840"}


id: FYPO:0006869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 36 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K36 methylation","synonyms":[{"name":"abolished histone H3 K36 methylation","type":"exact"},{"name":"abolished histone H3K36me","type":"exact"},{"name":"abolished histone lysine H3 K36 methylation","type":"exact"},{"name":"histone H3-K36 methylation abolished","type":"exact"},{"name":"histone H3-K36 methylation absent","type":"exact"}],"termid":"FYPO:0006869"}


id: GO:0102165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (Z)-hex-3-en-1-ol = (3Z)-hex-3-en-1-yl acetate + coenzyme A.","definition_xrefs":["GOC:pz","RHEA:28254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"(Z)-3-hexen-1-ol acetyltransferase activity","secondary_identifiers":["EC:2.3.1.195","MetaCyc:RXN-11852"],"termid":"GO:0102165"}


id: PBO:0005002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 2","termid":"PBO:0005002"}


id: PBO:0050483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A11","termid":"PBO:0050483"}


id: PBO:0076226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT7 like, STAGA complex subunit gamma","termid":"PBO:0076226"}


id: PBO:0026905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_H4-K20_dimethylation","termid":"PBO:0026905"}


id: PBO:0066699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 5 homolog B","termid":"PBO:0066699"}


id: PBO:0055703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH pseudogene 2","termid":"PBO:0055703"}


id: GO:1901301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cargo loading into COPII-coated vesicle.","definition_xrefs":["PMID:15899885","GOC:lb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"COPII-coated vesicle cargo loading","termid":"GO:0090110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of cargo loading into COPII-coated vesicle","synonyms":[{"name":"regulation of COPII coat-cargo complex assembly","type":"related"},{"name":"regulation of cargo loading into COPII vesicle","type":"exact"},{"name":"regulation of cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:1901301"}


id: GO:0044841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane of a gut granule, a lysosome-related organelle contained within the intestinal cells of the nematode C. elegans.","definition_xrefs":["PMID:22916203","GOC:kmv","PMID:24204312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"gut granule","termid":"GO:0044840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"gut granule membrane","termid":"GO:0044841"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: FYPO:0003743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth during glucose starvation","synonyms":[{"name":"decreased cell population growth during glucose depletion","type":"exact"},{"name":"decreased cell population growth during glucose deprivation","type":"exact"},{"name":"decreased cell population growth during glucose limitation","type":"related"},{"name":"decreased cell population growth in response to glucose starvation","type":"exact"},{"name":"hypersensitive to glucose starvation","type":"related"},{"name":"reduced cell population growth during glucose starvation","type":"related"},{"name":"sensitive to glucose starvation","type":"related"},{"name":"slow cell population growth during glucose starvation","type":"narrow"}],"termid":"FYPO:0003743"}


id: FYPO:0002866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tryptone. Cells stop growing (and may die) at a concentration of tryptone that allows wild type cells to grow. Tryptone is a mixture of peptides produced by digestion of casein with trypsin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tryptone","synonyms":[{"name":"hypersensitive to tryptone","type":"exact"},{"name":"sensitive to tryptone during mitotic cell cycle","type":"related"},{"name":"sensitive to tryptone during vegetative growth","type":"exact"}],"termid":"FYPO:0002866"}


id: PR:Q7Z9I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC409.08 gene.","definition_xrefs":["UniProtKB:Q7Z9I0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C409.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.08","synonyms":[{"name":"Spom972h-SPBC409.08","type":"exact"}],"termid":"PR:Q7Z9I0"}


id: GO:1900300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of laminarabiose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of laminarabiose transport (obsolete GO:1900300)","termid":"GO:1900300"}


id: GO:0010526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of retrotransposition. Retrotransposons are a subset of transposable elements that use an RNA intermediate and reverse transcribe themselves into the genome.","definition_xrefs":["GOC:tb","GOC:dph","PMID:32823517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"retrotransposition","termid":"GO:0032197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotransposon silencing","secondary_identifiers":["Wikipedia:Retrotransposon_silencing"],"synonyms":[{"name":"negative regulation of transposition, RNA-mediated","type":"exact"}],"termid":"GO:0010526"}


id: GO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 2-aminophenol + 3 O2 = 2 isophenoxazine + 6 H2O.","definition_xrefs":["MetaCyc:O-AMINOPHENOL-OXIDASE-RXN","EC:1.10.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"o-aminophenol oxidase activity","secondary_identifiers":["RHEA:40963"],"synonyms":[{"name":"2-aminophenol:O2 oxidoreductase activity","type":"related"},{"name":"2-aminophenol:oxygen oxidoreductase activity","type":"related"},{"name":"GriF","type":"related"},{"name":"isophenoxazine synthase activity","type":"related"},{"name":"o-aminophenol:O2 oxidoreductase activity","type":"related"}],"termid":"GO:0050149"}


id: PBO:0028512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation","termid":"PBO:0028512"}


id: PBO:0085436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; ribosome-bound Pub1p modulates stop codon decoding during translation termination","termid":"PBO:0085436"}


id: PBO:0074268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 5","termid":"PBO:0074268"}


id: GO:1903873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombinase mediator complex assembly.","definition_xrefs":["PMID:18347097","GO_REF:0000058","GOC:TermGenie","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase mediator complex assembly","termid":"GO:1903872"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase mediator complex assembly","termid":"GO:1903871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of DNA recombinase mediator complex assembly","synonyms":[{"name":"down regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"inhibition of DNA recombinase mediator complex assembly","type":"narrow"},{"name":"inhibition of DNA recombinase mediator complex formation","type":"narrow"},{"name":"negative regulation of DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903873"}


id: PBO:0067533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 677, pseudogene","termid":"PBO:0067533"}


id: PBO:0059830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 4","termid":"PBO:0059830"}


id: PBO:0091256
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of cut TWenty","termid":"PBO:0091256"}


id: PBO:0003020
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifts","termid":"PBO:0003020"}


id: PBO:0082192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; substrates include both aromatic and aliphatic aldehydes; uses NADPH as cofactor; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0082192"}


id: PR:O13629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lipoyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12561:SF0","OMA:SCHPO02855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoate-protein ligase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.09c","secondary_identifiers":["UniProtKB:O13629"],"synonyms":[{"name":"Spom972h-LIPT1","type":"exact"}],"termid":"PR:O13629"}


id: GO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the embryo that results in birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"parturition","termid":"GO:0007567"},{"relation_name":"part_of","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fetal process involved in parturition","termid":"GO:0060138"}


id: PBO:0086267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that stimulates the activity of serine palmitoyltransferase;  involved in sphingolipid biosynthesis; Lcb1p and Lcb2p are the two components of serine palmitoyltransferase","termid":"PBO:0086267"}


id: SO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of polynucleotide sequence produced by digestion with a restriction endonuclease.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Restriction_fragment"],"synonyms":[{"name":"restriction fragment","type":"exact"}],"termid":"SO:0000412"}


id: GO:0015101
data:
  {"annotated_genes":["SJAG_01890","SJAG_01589","SJAG_04295","SJAG_02060","SJAG_04718","SJAG_04725","SJAG_02029","SJAG_00835","SJAG_04637","SJAG_00543","SJAG_00626","SJAG_04731","SJAG_02059","SJAG_00763","SJAG_03400","SJAG_04984","SJAG_02125","SJAG_03652","SJAG_02152","SJAG_04673","SJAG_04588","SJAG_03256","SJAG_02962","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015220"},{"annotations":[115143,109890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[96418,94423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[96859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[96543,100031,93561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[106223,98989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[93562,100033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[98990,106224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[96544,93563,98991,106225,100034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[94425,104099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[96535,97396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[86842,100035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[100036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[95439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015200"},{"annotations":[103268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015489"},{"annotations":[86376,113628,86375,114889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031925"},{"annotations":[86377,114890,113629,86378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031927"},{"annotations":[84519,98789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000095"},{"annotations":[105644,107127,105656,103269,105650,113507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015606"},{"annotations":[99830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[86382,86381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null,"SJAG_00763":null,"SJAG_00835":null,"SJAG_01589":null,"SJAG_01890":null,"SJAG_02029":null,"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02152":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04673":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04731":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"organic cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9795207","Reactome:R-HSA-2161500","Reactome:R-HSA-549129","Reactome:R-HSA-549322","Reactome:R-HSA-561054","Reactome:R-HSA-9794523","Reactome:R-HSA-561072","Reactome:R-HSA-549279","Reactome:R-HSA-9794270","Reactome:R-HSA-549304"],"termid":"GO:0015101","terms_by_termid":{"GO:0000064":null,"GO:0000095":null,"GO:0005290":null,"GO:0005302":null,"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015200":null,"GO:0015220":null,"GO:0015234":null,"GO:0015489":null,"GO:0015606":null,"GO:0031925":null,"GO:0031927":null,"GO:0033229":null,"GO:0034216":null,"GO:0061459":null,"GO:0090422":null}}


id: PBO:0086559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YML122C is not an essential gene","termid":"PBO:0086559"}


id: PBO:0016543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-prenyltransferase","termid":"PBO:0016543"}


id: GO:2000362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of prostaglandin-E synthase activity","termid":"GO:2000361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin-E synthase activity","synonyms":[{"name":"negative regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"negative regulation of PGE isomerase activity","type":"exact"},{"name":"negative regulation of PGE2 isomerase activity","type":"exact"},{"name":"negative regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"negative regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"negative regulation of endoperoxide isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000362"}


id: PBO:0079750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 1","termid":"PBO:0079750"}


id: GO:0043750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of one or more alpha-D-mannose residues from GDP-mannose to positions 2,6 and others in 1-phosphatidyl-myo-inositol.","definition_xrefs":["EC:2.4.1.345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidylinositol alpha-mannosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.57-RXN","RHEA:47368"],"synonyms":[{"name":"GDP mannose-phosphatidyl-myo-inositol alpha-mannosyltransferase activity","type":"exact"},{"name":"GDP mannose:1-phosphatidyl-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"GDP-mannose:1-phosphatidyl-1D-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"GDPmannose:1-phosphatidyl-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase activity","type":"exact"},{"name":"phosphatidyl-myo-inositol alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0043750"}


id: FYPO:0000293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any DNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"DNA metabolism phenotype","synonyms":[{"name":"fission yeast DNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000293"}


id: GO:0061763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organelle membrane fusion process in which the membrane of a multivesicular body fuses with a lysosome to create a hybrid organelle.","definition_xrefs":["PMID:21118109","GOC:dph","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"},{"relation_name":"part_of","term_name":"endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0032510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"multivesicular body-lysosome fusion","synonyms":[{"name":"MVB-lysosome fusion","type":"exact"},{"name":"endosome-lysosome fusion","type":"related"},{"name":"fusion of MVB to lysosome","type":"exact"},{"name":"fusion of multivesicular body to lysosome","type":"exact"},{"name":"late endosome-lysosome fusion","type":"related"}],"termid":"GO:0061763"}


id: PBO:0005663
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Thi5","termid":"PBO:0005663"}


id: PBO:0036292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh2 (predicted)","termid":"PBO:0036292"}


id: PBO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member L, pseudogene","termid":"PBO:0047995"}


id: PBO:0052564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 1","termid":"PBO:0052564"}


id: GO:0035403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 6) + ATP = histone H3-phosphothreonine (position 6) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 6 of histone H3.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"histone H3T6 kinase activity","synonyms":[{"name":"histone H3-T6 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-T6 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T6 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T6 specific)","type":"exact"}],"termid":"GO:0035403"}


id: PBO:0060679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"norrin cystine knot growth factor NDP","termid":"PBO:0060679"}


id: GO:0050325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + tauropine = H+ + NADH + pyruvate + taurine.","definition_xrefs":["RHEA:12580","EC:1.5.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tauropine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01683","MetaCyc:TAUROPINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"},{"name":"N2-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"}],"termid":"GO:0050325"}


id: GO:0090470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the basal boundary between the stem and both vegetative and reproductive organs are established and maintained.","definition_xrefs":["PMID:18757555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of plant organ boundary","termid":"GO:0090691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot organ boundary specification","termid":"GO:0090470"}


id: GO:0060468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of fertilization process that takes place as part of egg activation, ensuring that only a single sperm fertilizes the egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fertilization","termid":"GO:0060467"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prevention of polyspermy","synonyms":[{"name":"negative regulation of fertilization involved in egg activation","type":"exact"},{"name":"polyspermy block","type":"exact"}],"termid":"GO:0060468"}


id: PR:P87074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tumor suppressor p53-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Crb2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.05","secondary_identifiers":["UniProtKB:P87074"],"synonyms":[{"name":"DNA repair protein rhp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TP53BP1","type":"exact"}],"termid":"PR:P87074"}


id: PBO:0029581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation_during_cellular_response_to_caffeine","termid":"PBO:0029581"}


id: PBO:0087735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Slx5-Slx8 SUMO-targeted Ub ligase (STUbL) complex; role in Ub-mediated degradation of histone variant Cse4p preventing mislocalization to euchromatin; role in proteolysis of spindle positioning protein Kar9p, and DNA repair proteins Rad52p and Rad57p; forms SUMO-dependent nuclear foci, including DNA repair centers; contains a RING domain and two SIM motifs; associates with the centromere; required for maintenance of genome integrity like human ortholog RNF4","termid":"PBO:0087735"}


id: PBO:0030005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_azygotic_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030005"}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: PBO:0047927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p13)","termid":"PBO:0047927"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30003614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: GO:0033889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 3-sulfate groups of the N-sulfo-D-glucosamine 3-O-sulfate units of heparin.","definition_xrefs":["EC:3.1.6.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"N-sulfoglucosamine-3-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.15-RXN"],"synonyms":[{"name":"N-sulfo-3-sulfoglucosamine 3-sulfohydrolase activity","type":"related"},{"name":"chondroitinsulfatase activity","type":"broad"}],"termid":"GO:0033889"}


id: GO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: PBO:0049347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 5","termid":"PBO:0049347"}


id: GO:0060823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to the formation of the neural plate anterior/posterior pattern.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060823)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060823"}


id: PBO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, meiotic Pit1","termid":"PBO:0001322"}


id: GO:1902374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:20160119","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of rRNA catabolic process","synonyms":[{"name":"regulation of rRNA breakdown","type":"exact"},{"name":"regulation of rRNA catabolism","type":"exact"},{"name":"regulation of rRNA degradation","type":"exact"}],"termid":"GO:1902374"}


id: PBO:0079975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 13","termid":"PBO:0079975"}


id: PBO:0061358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 18","termid":"PBO:0061358"}


id: GO:0071661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of granzyme B production","termid":"GO:0071661"}


id: PBO:0109092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 10","termid":"PBO:0109092"}


id: PBO:0059790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 16","termid":"PBO:0059790"}


id: PBO:0051586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor accessory protein","termid":"PBO:0051586"}


id: PBO:0090978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Iss10 ortholog","termid":"PBO:0090978"}


id: GO:1905063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:rph","GOC:BHF","PMID:19088079","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"regulation of VSMC differentiation","type":"exact"},{"name":"regulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905063"}


id: GO:0016854
data:
  {"annotated_genes":["SJAG_03818","SJAG_00036","SJAG_01784","SJAG_00501","SJAG_02462","SJAG_02951","SJAG_04298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109919,109920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004034"},{"annotations":[92562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004750"},{"annotations":[85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052856"},{"annotations":[85540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052857"},{"annotations":[88668,113520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036361"},{"annotations":[105799,109923,109924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003978"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in a molecule.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_00501":null,"SJAG_01784":null,"SJAG_02462":null,"SJAG_02951":null,"SJAG_03818":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"racemase and epimerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.1.-.-"],"synonyms":[{"name":"racemase and epimerase activity, acting on other compounds","type":"narrow"}],"termid":"GO:0016854","terms_by_termid":{"GO:0003978":null,"GO:0004034":null,"GO:0004750":null,"GO:0036361":null,"GO:0052856":null,"GO:0052857":null}}


