# terms

id: PBO:0041368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 46","termid":"PBO:0041368"}


id: PBO:0060289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6","termid":"PBO:0060289"}


id: PR:000045537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"Spom-spi1","type":"exact"}],"termid":"PR:000045537"}


id: GO:0098761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-7","termid":"GO:0098760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-7","synonyms":[{"name":"cellular response to IL-7","type":"exact"}],"termid":"GO:0098761"}


id: PBO:0051111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-67 (pseudogene)","termid":"PBO:0051111"}


id: GO:0102306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-benzoin + NADP(3-) = benzil + NADPH(4-) + H+.","definition_xrefs":["EC:1.1.1.320","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"benzil reductase [(S)-benzoin-forming] activity","secondary_identifiers":["MetaCyc:RXN-12898","RHEA:25968"],"termid":"GO:0102306"}


id: PBO:0026681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_maltose_carbon_source","termid":"PBO:0026681"}


id: PBO:0088910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP6 catalytic subunit Ppe1","termid":"PBO:0088910"}


id: GO:1901709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-larreatricin.","definition_xrefs":["GOC:TermGenie","PMID:12960376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-larreatricin metabolic process","synonyms":[{"name":"(+)-larreatricin metabolism","type":"exact"}],"termid":"GO:1901709"}


id: FYPO:0003146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrostatic pressure.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to hydrostatic pressure","synonyms":[{"name":"decreased growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"hypersensitive to hydrostatic pressure","type":"exact"},{"name":"sensitive to hydrostatic pressure during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrostatic pressure during vegetative growth","type":"exact"}],"termid":"FYPO:0003146"}


id: PBO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF221 family protein implicated in Golgi to plasma membrane transport (predicted)","termid":"PBO:0000378"}


id: PBO:0029307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell_during_G0_to_G1_transition","termid":"PBO:0029307"}


id: PBO:0060453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase","termid":"PBO:0060453"}


id: PBO:0069111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 360, pseudogene","termid":"PBO:0069111"}


id: MOD:01136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate","termid":"MOD:01136"}


id: PBO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRBOX5 pseudogene 1","termid":"PBO:0052614"}


id: PBO:0028618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U1_snRNP_binding","termid":"PBO:0028618"}


id: PBO:0067334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 426, pseudogene","termid":"PBO:0067334"}


id: GO:0016257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose (Man9-Asn) N-glycans by mannosyl-oligosaccharide 1,2-alpha-mannosidase. This may result in Man8GlcNAc2-Asn N-glycans (which in yeast may be subsequently modified by the addition of further mannose residues) or Man5GlcNAc2-Asn N-glycans that are substrates for further diversification in the Golgi apparatus.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan processing to secreted and cell-surface N-glycans","termid":"GO:0016257"}


id: PBO:0055452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2884","termid":"PBO:0055452"}


id: GO:2000795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"},{"relation_name":"negatively_regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000795"}


id: GO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-aspartic acid ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a aspartyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"},{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0042158"],"is_obsolete":false,"name":"GPI anchor biosynthetic process via N-aspartyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPI anchor anabolism via N-aspartyl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor formation via N-aspartyl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor synthesis via N-aspartyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"GO:0018266"}


id: PBO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 intronic transcript 1","termid":"PBO:0052122"}


id: PBO:0029102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_asparagine_level","termid":"PBO:0029102"}


id: GO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a microvillus of a rhabdomere.","definition_xrefs":["GOC:bf","GOC:sart","PMID:14744998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus membrane","termid":"GO:0031528"},{"relation_name":"part_of","term_name":"rhabdomere membrane","termid":"GO:0033583"},{"relation_name":"part_of","term_name":"rhabdomere microvillus","termid":"GO:0035996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"rhabdomere microvillus membrane","termid":"GO:0035997"}


id: PR:O14219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.14c gene.","definition_xrefs":["UniProtKB:O14219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.14c","synonyms":[{"name":"Spom972h-SPAC6B12.14c","type":"exact"}],"termid":"PR:O14219"}


id: PBO:0082902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys2His2 zinc-finger transcriptional repressor; involved in alkaline responsive gene repression as part of adaptation to alkaline conditions; involved in cell wall assembly; required for alkaline pH-stimulated haploid invasive growth and sporulation; activated by alkaline-dependent proteolytic processing which results in removal of the C-terminal tail; similar to A. nidulans PacC","termid":"PBO:0082902"}


id: GO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-quadruplex RNA structure, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad.","definition_xrefs":["PMID:18568163","PMID:19330720","PMID:18294969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"G-quadruplex RNA binding","secondary_identifiers":["Reactome:R-HSA-9836998"],"synonyms":[{"name":"G quadruplex binding","type":"exact"},{"name":"G quartet RNA binding","type":"exact"},{"name":"G quartet binding","type":"broad"},{"name":"G-quartet binding","type":"broad"}],"termid":"GO:0002151"}


id: GO:0021769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the orbitofrontal cortex over time from its initial formation until its mature state. The orbitofrontal cortex is a cerebral cortex region located in the frontal lobe.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0878937420","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"orbitofrontal cortex development","termid":"GO:0021769"}


id: GO:0034143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"regulation of TLR4 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034143"}


id: GO:0002692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cellular extravasation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"negatively_regulates","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular extravasation","synonyms":[{"name":"down regulation of cellular extravasation","type":"exact"},{"name":"down-regulation of cellular extravasation","type":"exact"},{"name":"downregulation of cellular extravasation","type":"exact"},{"name":"inhibition of cellular extravasation","type":"narrow"}],"termid":"GO:0002692"}


id: PBO:0071656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 20","termid":"PBO:0071656"}


id: PBO:0076914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 beta","termid":"PBO:0076914"}


id: PBO:0017678
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer's disease","termid":"PBO:0017678"}


id: PR:O94672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec23-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.04","synonyms":[{"name":"Spom972h-sec2302","type":"exact"}],"termid":"PR:O94672"}


id: GO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of epidermal stem cells within a population of cells.","definition_xrefs":["PMID:17666529","GOC:nhn","CL:1000428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal stem cell homeostasis","termid":"GO:0036334"}


id: PBO:0046961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member A","termid":"PBO:0046961"}


id: PATO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's having balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanced","termid":"PATO:0000757"}


id: FYPO:0006678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to chromium ions.","definition_xrefs":["PomBase:mah","PMID:30148840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to chromium","synonyms":[{"name":"increased number of Rad22 foci during cellular response to chromium","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to chromium during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to chromium during vegetative growth","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to chromium ions","type":"exact"}],"termid":"FYPO:0006678"}


id: GO:1990804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process that is required for double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:rb","GO_REF:0000060","GOC:TermGenie","PMID:22563681"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in double-strand break repair via nonhomologous end joining (obsolete GO:1990804)","synonyms":[{"name":"protein amino acid phosphorylation involved in NHEJ","type":"exact"},{"name":"protein amino acid phosphorylation involved in double-strand break repair via nonhomologous end joining","type":"exact"},{"name":"protein phosphorylation involved in NHEJ","type":"exact"}],"termid":"GO:1990804"}


id: FYPO:0000961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on sorbitol","synonyms":[{"name":"normal cell population growth in presence of sorbitol","type":"exact"},{"name":"normal cell population growth on glucitol","type":"exact"},{"name":"normal cell population growth on sorbitol","type":"exact"},{"name":"normal cellular response to sorbitol","type":"related"},{"name":"normal vegetative cell population growth on sorbitol","type":"exact"}],"termid":"FYPO:0000961"}


id: PBO:0061929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 4","termid":"PBO:0061929"}


id: GO:0021684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar granule layer. This process pertains to the initial formation of a structure from unspecified parts. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer formation","termid":"GO:0021684"}


id: GO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052220)","synonyms":[{"name":"positive aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052220"}


id: GO:1904801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron remodeling.","definition_xrefs":["GOC:TermGenie","PMID:21609829","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron maturation","termid":"GO:0014042"},{"relation_name":"is_a","term_name":"regulation of neuron remodeling","termid":"GO:1904799"},{"relation_name":"positively_regulates","term_name":"neuron remodeling","termid":"GO:0016322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron remodeling","synonyms":[{"name":"activation of axon pruning","type":"narrow"},{"name":"activation of neuron remodeling","type":"narrow"},{"name":"activation of neuronal remodeling","type":"narrow"},{"name":"positive regulation of axon pruning","type":"narrow"},{"name":"positive regulation of neuron remodelling","type":"exact"},{"name":"positive regulation of neuronal remodeling","type":"exact"},{"name":"up regulation of axon pruning","type":"narrow"},{"name":"up regulation of neuron remodeling","type":"exact"},{"name":"up regulation of neuronal remodeling","type":"exact"},{"name":"up-regulation of axon pruning","type":"narrow"},{"name":"up-regulation of neuron remodeling","type":"exact"},{"name":"up-regulation of neuronal remodeling","type":"exact"},{"name":"upregulation of axon pruning","type":"narrow"},{"name":"upregulation of neuron remodeling","type":"exact"},{"name":"upregulation of neuronal remodeling","type":"exact"}],"termid":"GO:1904801"}


id: PBO:0081839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 774","termid":"PBO:0081839"}


id: GO:0106313
data:
  {"annotated_genes":["SJAG_03712","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92846,94613],"is_not":false,"summary":null,"term":"GO:0106313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP+ = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADPH + H+.","definition_xrefs":["RHEA:19817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:0004489"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.1.53","MetaCyc:RXN-21991"],"termid":"GO:0106313","terms_by_termid":{"GO:0106313":null}}


id: GO:0032201
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93390],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"The process in which telomeric DNA is synthesized semi-conservatively by the conventional replication machinery and telomeric accessory factors as part of cell cycle DNA replication.","definition_xrefs":["PMID:16598261","GOC:BHF","GOC:BHF_telomere","GOC:rl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0007049","GO:0032200","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equal telomere replication","type":"related"},{"name":"telomeric fork progression","type":"narrow"},{"name":"telomeric replication fork progression","type":"narrow"}],"termid":"GO:0032201","terms_by_termid":{"GO:0032215":null}}


id: PBO:0027401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_triglyceride_biosynthetic_process","termid":"PBO:0027401"}


id: FYECO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium containing a low concentration of glucose (~0.5%) as carbon source, salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low glucose MM","synonyms":[{"name":"low glucose minimal medium","type":"exact"}],"termid":"FYECO:0000104"}


id: SO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U3_LTR_region","termid":"SO:0000424"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_five_prime_LTR_region","synonyms":[{"name":"U3 5' long term repeat region","type":"exact"},{"name":"U3 five prime LTR region","type":"exact"}],"termid":"SO:0000429"}


id: PBO:0067719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 17","termid":"PBO:0067719"}


id: SO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is monocistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_transcript","synonyms":[{"name":"monocistronic transcript","type":"exact"}],"termid":"SO:0000665"}


id: GO:0034511
data:
  {"annotated_genes":["SJAG_03028","SJAG_00344","SJAG_04224","SJAG_03846","SJAG_00945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90530,91932,104904,111378,111924],"is_not":false,"summary":null,"term":"GO:0034511"}]},"cv_name":"molecular_function","definition":"Binding to a U3 small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00945":null,"SJAG_03028":null,"SJAG_03846":null,"SJAG_04224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"U3 snoRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034511","terms_by_termid":{"GO:0034511":null}}


id: PBO:0087129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein; promotes elongation, regulates termination, and carries poly(A) mRNA from nucleus to cytoplasm; represses translation initiation by binding eIF4G; required for pre-mRNA splicing; interacts with E3 ubiquitin ligase Bre1p, linking histone ubiquitination to mRNA processing; may have role in telomere maintenance; dissociation from mRNAs promoted by Mtr10p; phosphorylated by Sky1p in cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0087129"}


id: GO:1900374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.","definition_xrefs":["GOC:go_curators","PMID:8804308","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900374)","synonyms":[{"name":"activation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900374"}


id: GO:0060292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates synaptic plasticity such that synapses are changed resulting in the decrease in the rate, or frequency of synaptic transmission at the synapse.","definition_xrefs":["GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"long-term synaptic depression","synonyms":[{"name":"LTD","type":"related"},{"name":"long term depression","type":"broad"},{"name":"long term synaptic depression","type":"exact"}],"termid":"GO:0060292"}


id: PBO:0055303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2730","termid":"PBO:0055303"}


id: GO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-23 of any form of vitamin D.","definition_xrefs":["PMID:22100522","PMID:30205156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}


id: GO:1904666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["PMID:26216882","GOC:TermGenie","GOC:dph","GO_REF:0000059","GOC:vw","PMID:10921876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:1903834"],"synonyms":[{"name":"regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"regulation of E3","type":"related"},{"name":"regulation of protein ubiquitination activity","type":"exact"},{"name":"regulation of ubiquitin ligase activity","type":"exact"}],"termid":"GO:1904666"}


id: PBO:0059680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 46","termid":"PBO:0059680"}


id: GO:0010955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of protein maturation by peptide bond cleavage.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"is_a","term_name":"negative regulation of protein maturation","termid":"GO:1903318"},{"relation_name":"negatively_regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"negative regulation of protein processing","synonyms":[{"name":"negative regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0010955"}


id: PBO:0078362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 7-1","termid":"PBO:0078362"}


id: GO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of roots are generated and organized. The root is the usually underground part of a seed plant body that originates from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support.","definition_xrefs":["GOC:sm","ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root morphogenesis","termid":"GO:0010015"}


id: PBO:0084079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-cyclohydrolase I, catalyzes first step in folic acid biosynthesis; human homolog GCH1 is implicated in dopa-responsive dystonia (DRD), and can complement yeast null mutant","termid":"PBO:0084079"}


id: PBO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin like 1","termid":"PBO:0042931"}


id: PBO:0082233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima3p overexpression allows the ima1 null mutant to grow on isomaltose; lower activitiy and thermostability in vitro than Ima2p despite sequence difference of only 3 amino acids; cleaves alpha-1,3 linkage of nigerose and turanose, but not alpha-1,5 of leucrose; identical to IMA4","termid":"PBO:0082233"}


id: FYPO:0004515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which DNA is not visible in a distinct structure corresponding to the nucleus, but is instead diffuse or not visible at all.","definition_xrefs":["PomBase:mah","PMID:25552606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000661","FYPO:0000641","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome morphology, indistinct DNA","synonyms":[{"name":"abnormal chromosome morphology, indistinct DNA during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology, indistinct DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004515"}


id: PBO:0089135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease family, related to holliday junction resolvases, implicated in DNA or tRNA metabolism","termid":"PBO:0089135"}


id: PBO:0079107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 2","termid":"PBO:0079107"}


id: PBO:0087548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA domain of TFIIIC that binds BoxA DNA promoter sites of tRNA and similar genes; has TPR motifs; human homolog is TFIIIC-102","termid":"PBO:0087548"}


id: GO:0036239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taxusin + [reduced NADPH-hemoprotein reductase] + O2 = 7beta-hydroxytaxusin + [oxidized NADPH-hemoprotein reductase] + H2O and 2alpha-hydroxytaxusin + [reduced NADPH-hemoprotein reductase] + O2 = 2alpha,7beta-dihydroxytaxusin + [oxidized NADPH-hemoprotein reductase] + H2O.","definition_xrefs":["PMID:15178487","PMID:15157877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"taxoid 7beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-12885","KEGG_REACTION:R09868","EC:1.14.14.182"],"termid":"GO:0036239"}


id: GO:1905915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GOC:BHF","PMID:25089138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"}


id: FYPO:0001332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to stress is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of translation in response to stress","termid":"FYPO:0000263"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal regulation of translation in response to stress during vegetative growth","synonyms":[{"name":"abnormal regulation of translation in response to stress during mitotic cell cycle","type":"related"},{"name":"protein synthesis after stress, defective during vegetative growth","type":"related"}],"termid":"FYPO:0001332"}


id: RO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"RO:0002022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulated_by","termid":"RO:0002024"}


id: GO:0043256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha, beta and gamma. Provides an integral part of the structural scaffolding of basement membranes.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin complex","termid":"GO:0043256"}


id: PBO:0078058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 48","termid":"PBO:0078058"}


id: GO:0033784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + senecionine = H2O + NADP+ + senecionine N-oxide.","definition_xrefs":["EC:1.14.13.101","RHEA:11420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"senecionine N-oxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.101-RXN","KEGG_REACTION:R07373"],"synonyms":[{"name":"SNO","type":"related"},{"name":"senecionine monooxygenase (N-oxide-forming) activity","type":"related"},{"name":"senecionine,NADPH:oxygen oxidoreductase (N-oxide-forming) activity","type":"related"}],"termid":"GO:0033784"}


id: PBO:0056396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 3","termid":"PBO:0056396"}


id: FYPO:0005533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 at the IRC1L boundary element occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25972440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0005532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","synonyms":[{"name":"decreased histone H4-K16 acetylation at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K16 acetylation at centromeric boundary element IRC1L during vegetative growth","type":"exact"},{"name":"reduced histone H4-K16 acetylation at boundary element IRC1L during vegetative growth","type":"exact"}],"termid":"FYPO:0005533"}


id: PBO:0005242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85/PhoA-like cyclin-dependent kinase Pef1","termid":"PBO:0005242"}


id: PATO:0000523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000523 insecticide sensitivity value (obsolete PATO:0000523)","termid":"PATO:0000523"}


id: GO:0018271
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004077"},{"annotations":[104742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004078"},{"annotations":[104743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004079"},{"annotations":[104744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004080"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + protein = AMP + diphosphate + biotin-protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"biotin-protein ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2993447","Reactome:R-HSA-9035987","Reactome:R-HSA-2993814","Reactome:R-HSA-4167511","EC:6.3.4.-","Reactome:R-HSA-2993802","Reactome:R-HSA-3323184","GO:0000106","MetaCyc:BIOTINLIG-RXN","Reactome:R-HSA-2993799","Reactome:R-HSA-9035988","Reactome:R-HSA-9035990"],"synonyms":[{"name":"biotin-apoprotein ligase activity","type":"exact"}],"termid":"GO:0018271","terms_by_termid":{"GO:0004077":null,"GO:0004078":null,"GO:0004079":null,"GO:0004080":null}}


id: MOD:00416
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A change resulting in an alteration of the measured molecular mass of a peptide or protein hydroxyl amino acid phosphorylated promptly followed by secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["Unimod:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with neutral loss of phosphate","termid":"MOD:00432"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"}],"termid":"MOD:00416"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: GO:0033707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineic acid + NAD(P)+ = 3''-deamino-3''-oxonicotianamine + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3''-deamino-3''-oxonicotianamine reductase activity","secondary_identifiers":["MetaCyc:1.1.1.285-RXN"],"synonyms":[{"name":"2'-deoxymugineic acid:NAD(P)+ 3''-oxidoreductase activity","type":"related"}],"termid":"GO:0033707"}


id: FYPO:0003511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"},{"relation_name":"is_a","term_name":"decreased cellular L-ergothioneine level","termid":"FYPO:0003521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"L-ergothioneine absent from cell","termid":"FYPO:0003511"}


id: GO:0060317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:1996351","GOC:BHF","GOC:dph","PMID:16314491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac epithelial to mesenchymal transition","synonyms":[{"name":"heart epithelial to mesenchymal transition","type":"exact"}],"termid":"GO:0060317"}


id: GO:1901602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dethiobiotin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dethiobiotin binding","termid":"GO:1901602"}


id: GO:0052571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to symbiont immune response (obsolete GO:0052571)","synonyms":[{"name":"response to symbiont immune response","type":"exact"}],"termid":"GO:0052571"}


id: GO:0034003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + vetispiradiene.","definition_xrefs":["RHEA:10340","EC:4.2.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vetispiradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-4823","KEGG_REACTION:R06523"],"synonyms":[{"name":"HVS","type":"related"},{"name":"pemnaspirodiene synthase activity","type":"related"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, vetispiradiene-forming) activity","type":"related"},{"name":"vetispiradiene cyclase activity","type":"related"},{"name":"vetispiradiene-forming farnesyl pyrophosphate cyclase activity","type":"related"}],"termid":"GO:0034003"}


id: PBO:0085376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[PIN(+)] prion; an infectious protein conformation that is generally an ordered protein aggregate","termid":"PBO:0085376"}


id: GO:0042703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclic, physiologic discharge through the vagina of blood and endometrial tissues from the nonpregnant uterus.","definition_xrefs":["GOC:curators","PMID:8693059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstruation","secondary_identifiers":["Wikipedia:Menstruation"],"termid":"GO:0042703"}


id: SO:0001485
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y' element is a repeat region (SO:0000657) located adjacent to telomeric repeats or X element combinatorial repeats, either as a single copy or tandem repeat of two to four copies.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_prime_element","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:Y_prime_element","type":"exact"},{"name":"Y prime element","type":"exact"},{"name":"Y' element","type":"exact"}],"termid":"SO:0001485"}


id: PBO:0066916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 218","termid":"PBO:0066916"}


id: FYPO:0006068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to endoplasmic reticulum","synonyms":[{"name":"increased protein localisation to endoplasmic reticulum","type":"exact"},{"name":"increased protein localization to ER","type":"exact"},{"name":"increased protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"increased protein localization to endoplasmic reticulum during vegetative growth","type":"exact"}],"termid":"FYPO:0006068"}


id: PBO:0054180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1554","termid":"PBO:0054180"}


id: RO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds via some process of localization","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_localization_to","termid":"RO:0002337"}


id: PBO:0078407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 2-1","termid":"PBO:0078407"}


id: PBO:0075696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 1","termid":"PBO:0075696"}


id: PBO:0054051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1393","termid":"PBO:0054051"}


id: PBO:0055709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb development membrane protein 1","termid":"PBO:0055709"}


id: PBO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin B","termid":"PBO:0044193"}


id: GO:1905547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","PMID:25819580"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of subtelomeric heterochromatin assembly (obsolete GO:1905547)","synonyms":[{"name":"regulation of telomeric heterochromatin assembly","type":"related"},{"name":"regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905547"}


id: SO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plastid gene from leucoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"leucoplast_sequence","termid":"SO:0000747"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_gene","synonyms":[{"name":"leucoplast gene","type":"exact"}],"termid":"SO:0000095"}


id: PBO:0081119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNFX1 antisense RNA 1","termid":"PBO:0081119"}


id: PR:O42935
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.11","synonyms":[{"name":"Spom972h-rpl3201","type":"exact"}],"termid":"PR:O42935"}


id: GO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective autophagy process in which a peroxisome is degraded by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:12914914","PMID:16973210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"},{"relation_name":"is_a","term_name":"autophagy of peroxisome","termid":"GO:0030242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"pexophagy","synonyms":[{"name":"macropexophagy","type":"exact"}],"termid":"GO:0000425"}


id: PBO:0027881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation","termid":"PBO:0027881"}


id: GO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the heart rudiment are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"heart rudiment development","termid":"GO:0003313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart rudiment morphogenesis","synonyms":[{"name":"heart cone morphogenesis","type":"exact"}],"termid":"GO:0003314"}


id: GO:0035151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that an epithelial tube in an open tracheal system is of the correct length and diameter. Tracheal tubes undergo highly regulated tube-size increases during development, expanding up to 40 times their initial size by the end of larval life. Tube size appears to be controlled by regulation of apical membrane expansion and secretion, rather than by changes in cell number, size or shape.","definition_xrefs":["PMID:10887083","PMID:12930776","PMID:12973360","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size","termid":"GO:0035150"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube size, open tracheal system","synonyms":[{"name":"regulation of tracheal tube size","type":"exact"}],"termid":"GO:0035151"}


id: GO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-27 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-27 receptor binding","synonyms":[{"name":"IL-27","type":"narrow"},{"name":"interleukin-27 receptor ligand","type":"narrow"}],"termid":"GO:0045523"}


id: PBO:0083930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fungal-specific protein of unknown function; induced in respiratory-deficient cells; YAR068W has a paralog, YHR214W-A, that arose from a segmental duplication","termid":"PBO:0083930"}


id: GO:0097373
data:
  {"annotated_genes":["SJAG_00884","SJAG_00857","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102598,103430,111450],"is_not":false,"summary":null,"term":"GO:0097373"}]},"cv_name":"cellular_component","definition":"A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.","definition_xrefs":["GOC:mah","PMID:9305914","PMID:15007098","PMID:10770926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MCM core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MCM4/6/7 complex","type":"exact"}],"termid":"GO:0097373","terms_by_termid":{"GO:0097373":null}}


id: GO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of female pigmentation","termid":"GO:0048089"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female pigmentation","synonyms":[{"name":"activation of female pigmentation","type":"narrow"},{"name":"stimulation of female pigmentation","type":"narrow"},{"name":"up regulation of female pigmentation","type":"exact"},{"name":"up-regulation of female pigmentation","type":"exact"},{"name":"upregulation of female pigmentation","type":"exact"}],"termid":"GO:0048091"}


id: PR:P10506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P10506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase byr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.13","synonyms":[{"name":"MAPK kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPKK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-byr1","type":"exact"}],"termid":"PR:P10506"}


id: PBO:0072205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 4","termid":"PBO:0072205"}


id: PR:O13813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tom22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.16","synonyms":[{"name":"Spom972h-tom22","type":"exact"},{"name":"mitochondrial 22 kDa outer membrane protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translocase of outer membrane 22 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13813"}


id: PBO:0062019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 13","termid":"PBO:0062019"}


id: PBO:0089272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm8","termid":"PBO:0089272"}


id: PBO:0084183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase and subunit of Set3 and Rpd3L complexes; required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; co-localizes with Cmr1p in nuclear foci in response to DNA damage by MMS","termid":"PBO:0084183"}


id: PR:Q10088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.09","synonyms":[{"name":"AUH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC11D3.09","type":"exact"},{"name":"agmatine ureohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10088"}


id: PBO:0027488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_G0","termid":"PBO:0027488"}


id: GO:0010675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular carbohydrate metabolic process (obsolete GO:0010675)","termid":"GO:0010675"}


id: PBO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 15","termid":"PBO:0060027"}


id: PATO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Auxotrophic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophic quality","termid":"PATO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxotrophic","termid":"PATO:0000422"}


id: PBO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_guanyl-nucleotide_exchange_factor_activity","termid":"PBO:0033778"}


id: SO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An EST read from the 5' end of a transcript that usually codes for a protein. These regions tend to be conserved across species and do not change much within a gene family.","direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_EST","synonyms":[{"name":"5' EST","type":"exact"},{"name":"five prime EST","type":"exact"}],"termid":"SO:0001208"}


id: GO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"positively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pteridine metabolic process","synonyms":[{"name":"activation of pteridine metabolic process","type":"narrow"},{"name":"positive regulation of pteridine metabolism","type":"exact"},{"name":"stimulation of pteridine metabolic process","type":"narrow"},{"name":"up regulation of pteridine metabolic process","type":"exact"},{"name":"up-regulation of pteridine metabolic process","type":"exact"},{"name":"upregulation of pteridine metabolic process","type":"exact"}],"termid":"GO:0045864"}


id: GO:0014071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloalkane stimulus. A cycloalkane is a cyclic saturated hydrocarbon having the general formula CnH2n.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cycloalkane","termid":"GO:0014071"}


id: GO:2000471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell migration","synonyms":[{"name":"regulation of hemopoietic stem cell migration","type":"exact"}],"termid":"GO:2000471"}


id: PBO:0045837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 27","termid":"PBO:0045837"}


id: PR:Q09834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00302","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.08","secondary_identifiers":["UniProtKB:Q09834"],"synonyms":[{"name":"Spom972h-SLC25A44","type":"exact"}],"termid":"PR:Q09834"}


id: PBO:0081933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1C","termid":"PBO:0081933"}


id: FYPO:0006067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, does not occur.","definition_xrefs":["PomBase:mah","PMID:22696680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished microtubule polymerization","synonyms":[{"name":"abolished microtubule catastrophe","type":"related"},{"name":"abolished microtubule polymerisation","type":"exact"},{"name":"abolished microtubule polymerization","type":"related"},{"name":"abolished microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abolished microtubule polymerization during vegetative growth","type":"exact"},{"name":"abolished microtubule shrinkage","type":"related"},{"name":"microtubule polymerization abolished","type":"exact"}],"termid":"FYPO:0006067"}


id: PBO:0085112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclease required for DNA single- and double-strand break repair; acts at a post-incision step in repair of breaks that result from interstrand cross-links produced by a variety of mono- and bi-functional psoralen derivatives; induced by UV-irradiation; forms nuclear foci upon DNA replication stress","termid":"PBO:0085112"}


id: SO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array that corresponds to a silenced version of a mating type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_array","termid":"SO:0005854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent_mating_type_cassette_array","synonyms":[{"name":"silent mating-type cassette","type":"related"}],"termid":"SO:0001984"}


id: PBO:0057313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518a-1","termid":"PBO:0057313"}


id: GO:0006018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate catabolic process","synonyms":[{"name":"2-deoxyribose 1-phosphate breakdown","type":"exact"},{"name":"2-deoxyribose 1-phosphate catabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate degradation","type":"exact"},{"name":"deoxyribose 1-phosphate catabolic process","type":"exact"}],"termid":"GO:0006018"}


id: PBO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 71","termid":"PBO:0071069"}


id: PBO:0071125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 127","termid":"PBO:0071125"}


id: PBO:0035874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_trimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035874"}


id: GO:0042276
data:
  {"annotated_genes":["SJAG_04089","SJAG_04190","SJAG_16460","SJAG_03906","SJAG_00611","SJAG_02667","SJAG_04791","SJAG_00153","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92078,95491,99063,99083,100172,100411,109763,113479],"is_not":false,"summary":null,"term":"GO:0042276"},{"annotations":[107954],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions and causes an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites.","definition_xrefs":["GOC:elh","PMID:11485998","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translesion synthesis","termid":"GO:0019985"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_02667":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"error-prone postreplication DNA repair","type":"related"},{"name":"mutagenic PRR","type":"exact"},{"name":"mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:0042276","terms_by_termid":{"GO:0042276":null,"GO:1904332":null}}


id: PBO:0027516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_polymerase_II_carboxy-terminal_domain_kinase_activity","termid":"PBO:0027516"}


id: PBO:0052099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 2","termid":"PBO:0052099"}


id: GO:0038095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of immunoglobulin E (IgE) to an Fc-epsilon receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:phg","PMID:12413516","PMID:15048725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor signaling pathway","termid":"GO:0038093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc-epsilon receptor signaling pathway","synonyms":[{"name":"Fc-epsilon receptor signalling pathway","type":"exact"}],"termid":"GO:0038095"}


id: PBO:0076910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 2","termid":"PBO:0076910"}


id: GO:0021567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 1 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 development","termid":"GO:0021567"}


id: PBO:0042244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 6","termid":"PBO:0042244"}


id: PBO:0053828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1093","termid":"PBO:0053828"}


id: PBO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 52","termid":"PBO:0071050"}


id: PBO:0027294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell_with_fragmented_septum","termid":"PBO:0027294"}


id: GO:0034559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bisphenol A + NADH + H+ + O2 = 1,2-bis(4-hydroxyphenyl)-2-propanol + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"bisphenol A hydroxylase B activity","termid":"GO:0034559"}


id: SO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cassette pseudogene is a kind of gene in an inactive form which may recombine at a telomeric locus to form a functional copy.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_pseudogene","synonyms":[{"name":"cassette pseudogene","type":"exact"},{"name":"cassette type psedogene","type":"related"}],"termid":"SO:0001434"}


id: PBO:0034350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_kinase_activity","termid":"PBO:0034350"}


id: PBO:0060312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYLK antisense RNA 2","termid":"PBO:0060312"}


id: PR:Q8NIL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIL4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.05","synonyms":[{"name":"Spom972h-SPBPB21E7.05","type":"exact"}],"termid":"PR:Q8NIL4"}


id: GO:0102935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + gypsogenin = gypsogenin-28-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"gypsogenin-UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9012"],"termid":"GO:0102935"}


id: GO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"granzyme A production","termid":"GO:0035746"}


id: GO:0019142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + propanoyl-CoA = 2-hydroxyglutarate + CoA + H+.","definition_xrefs":["RHEA:19185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"2-hydroxyglutarate synthase activity","secondary_identifiers":["MetaCyc:HYDGLUTSYN-RXN","KEGG_REACTION:R00932","EC:2.3.3.11"],"synonyms":[{"name":"2-hydroxyglutarate glyoxylate-lyase (CoA-propanoylating) activity","type":"related"},{"name":"2-hydroxyglutaratic synthetase activity","type":"related"},{"name":"2-hydroxyglutaric synthetase activity","type":"related"},{"name":"alpha-hydroxyglutarate synthase activity","type":"related"},{"name":"hydroxyglutarate synthase activity","type":"related"},{"name":"propanoyl-CoA:glyoxylate C-propanoyltransferase (thioester-hydrolysing, 2-carboxyethyl-forming)","type":"related"}],"termid":"GO:0019142"}


id: PBO:0027168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation","termid":"PBO:0027168"}


id: GO:0070102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-6 binding to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-6","termid":"GO:0071354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-6-mediated signaling pathway","synonyms":[{"name":"IL-6-mediated signaling pathway","type":"related"},{"name":"interleukin-6-mediated signalling pathway","type":"exact"}],"termid":"GO:0070102"}


id: MOD:00748
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a pterin group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin modified residue","synonyms":[{"name":"PterRes","type":"exact"}],"termid":"MOD:00748"}


id: PBO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 1","termid":"PBO:0050877"}


id: PBO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like 2","termid":"PBO:0043797"}


id: PBO:0029324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA_during_mitotic_G2_phase","termid":"PBO:0029324"}


id: PBO:0027287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027287"}


id: PBO:0063890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P pseudogene 3","termid":"PBO:0063890"}


id: PBO:0065085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated catalytic subunit alpha 2","termid":"PBO:0065085"}


id: PBO:0084912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic exit network (MEN) scaffold protein; core component of the SPB outer plaque that functions in astral microtubule organization via Spc72p; scaffold for recruitment of MEN components, such as Cdc15p, Tem1p and the Bfa1p-Bub2p checkpoint complex; phosphorylation by Cdc15p creates a Dbf2p-Mob1p phospho-docking site enabling Cdc15p-dependent complex activation and mitotic exit; acts through the MEN to specify Kar9p-mediated asymmetric SPB inheritance; homologous to mammalian centriolin","termid":"PBO:0084912"}


id: FYPO:0000274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"delayed onset of cytokinesis","termid":"FYPO:0000420"},{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic M phase","secondary_identifiers":["FYPO:0000609","FYPO:0004234"],"synonyms":[{"name":"prolonged mitotic M phase","type":"exact"},{"name":"prolonged mitosis","type":"related"},{"name":"delayed mitotic M phase progression","type":"related"},{"name":"delayed mitotic M phase progression during vegetative growth","type":"exact"},{"name":"increased duration of M phase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitosis","type":"related"},{"name":"increased duration of mitosis during mitotic cell cycle","type":"related"},{"name":"increased duration of mitosis during vegetative growth","type":"related"},{"name":"increased duration of mitotic nuclear division","type":"related"},{"name":"increased mitotic M phase duration","type":"exact"},{"name":"increased mitotic M phase duration during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in M phase: delayed","type":"related"},{"name":"spindle checkpoint activated","type":"related"}],"termid":"FYPO:0000274"}


id: PBO:0004674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina","termid":"PBO:0004674"}


id: GO:0001798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIa hypersensitivity","synonyms":[{"name":"activation of type IIa hypersensitivity","type":"narrow"},{"name":"stimulation of type IIa hypersensitivity","type":"narrow"},{"name":"up regulation of type IIa hypersensitivity","type":"exact"},{"name":"up-regulation of type IIa hypersensitivity","type":"exact"},{"name":"upregulation of type IIa hypersensitivity","type":"exact"}],"termid":"GO:0001798"}


id: GO:0061389
data:
  {"annotated_genes":["SJAG_01456","SJAG_03705","SJAG_04724","SJAG_04322","SJAG_02838","SJAG_03486","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103037,99677,106958,112662,114048,95913,84306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"Any process that modulates the direction of cell growth.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of direction of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061389","terms_by_termid":{"GO:0051523":null}}


id: PBO:0044350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 35","termid":"PBO:0044350"}


id: PBO:0068744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 1","termid":"PBO:0068744"}


id: GO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gas transport","termid":"GO:0015669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oxygen transport","termid":"GO:0015671"}


id: GO:0046273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["GOC:jl","PMID:10074466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignan catabolic process","synonyms":[{"name":"lignan breakdown","type":"exact"},{"name":"lignan catabolism","type":"exact"},{"name":"lignan degradation","type":"exact"}],"termid":"GO:0046273"}


id: GO:0052927
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74040,83992],"is_not":false,"summary":null,"term":"GO:0052927"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + CTP = a tRNA with a 3' CC end + 2 diphosphate.","definition_xrefs":["PMID:33095240","RHEA:60008","PMID:31936900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0140098","GO:0016779","GO:0140101"],"is_obsolete":false,"name":"CTP:tRNA cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0052928"],"synonyms":[{"name":"CTP:3'-cytidine-tRNA cytidylyltransferase activity","type":"related"}],"termid":"GO:0052927","terms_by_termid":{"GO:0052927":null}}


id: PBO:0085664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nonstop mRNA decay; predicted to be palmitoylated","termid":"PBO:0085664"}


id: PBO:0029797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_distribution","termid":"PBO:0029797"}


id: PBO:0109301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization increases the mRNA concentration","termid":"PBO:0109301"}


id: PBO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD244 molecule","termid":"PBO:0042380"}


id: PBO:0062382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 11 pseudogene","termid":"PBO:0062382"}


id: PBO:0089226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific intrinsically disordered protein","termid":"PBO:0089226"}


id: PBO:0065504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraspeckle component 1 pseudogene 1","termid":"PBO:0065504"}


id: FYPO:0003003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere during vegetative growth","termid":"FYPO:0000451"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to kinetochore during vegetative growth","synonyms":[{"name":"increased protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003003"}


id: SO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 70 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma_70_element","synonyms":[{"name":"bacterial RNA polymerase promoter sigma 70","type":"exact"}],"termid":"SO:0001671"}


id: PBO:0089768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase alpha subunit Gta1","termid":"PBO:0089768"}


id: PBO:0030120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030120"}


id: PBO:0074328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4","termid":"PBO:0074328"}


id: PBO:0085702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA splicing by the spliceosome; component of a complex containing Cef1p; interacts genetically with ISY1 and BUD13; may bind RNA; has similarity to S. pombe Cwf21p","termid":"PBO:0085702"}


id: PR:O74524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline dehydrogenase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05037","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.03c","secondary_identifiers":["UniProtKB:O74524"],"synonyms":[{"name":"Spom972h-PRODH2","type":"exact"},{"name":"proline oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74524"}


id: PBO:0064530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G pseudogene 2","termid":"PBO:0064530"}


id: PBO:0063248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 13","termid":"PBO:0063248"}


id: GO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = acetaldehyde + formate.","definition_xrefs":["EC:4.1.2.36","RHEA:17909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactate aldolase activity","secondary_identifiers":["KEGG_REACTION:R00753","MetaCyc:LACTATE-ALDOLASE-RXN"],"synonyms":[{"name":"(S)-lactate acetaldehyde-lyase (formate-forming)","type":"related"},{"name":"(S)-lactate acetaldehyde-lyase activity","type":"related"},{"name":"lactate synthase activity","type":"related"}],"termid":"GO:0050041"}


id: PR:O13702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycerol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00898","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.03c","secondary_identifiers":["UniProtKB:O13702"],"synonyms":[{"name":"GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gldA","type":"exact"}],"termid":"PR:O13702"}


id: PATO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000866 suckling reflex value (obsolete PATO:0000866)","termid":"PATO:0000866"}


id: PBO:0054451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1848","termid":"PBO:0054451"}


id: PBO:0072636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 2","termid":"PBO:0072636"}


id: MOD:01103
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00503. Remap to MOD:00503.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01103 myristoleylation (one double bond) (obsolete MOD:01103)","termid":"MOD:01103"}


id: PBO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fission yeast specific family","termid":"PBO:0000005"}


id: PBO:0083376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 3' end of verified ORF SCW10/YMR305C","termid":"PBO:0083376"}


id: PBO:0090950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp7","termid":"PBO:0090950"}


id: PR:O60092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14C8.11c gene.","definition_xrefs":["UniProtKB:O60092","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.11c","synonyms":[{"name":"Spom972h-SPBC14C8.11c","type":"exact"}],"termid":"PR:O60092"}


id: FYPO:0000881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000881"}


id: PBO:0052929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-1","termid":"PBO:0052929"}


id: GO:0009102
data:
  {"annotated_genes":["SJAG_01935","SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75202,110287],"is_not":false,"summary":null,"term":"GO:0009102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin metabolic process","termid":"GO:0006768"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00673":null,"SJAG_01935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"biotin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:BIOTIN-SYN"],"synonyms":[{"name":"biotin anabolism","type":"exact"},{"name":"biotin biosynthesis","type":"exact"},{"name":"biotin formation","type":"exact"},{"name":"biotin synthesis","type":"exact"},{"name":"vitamin B7 biosynthesis","type":"exact"},{"name":"vitamin B7 biosynthetic process","type":"exact"},{"name":"vitamin H biosynthesis","type":"exact"},{"name":"vitamin H biosynthetic process","type":"exact"}],"termid":"GO:0009102","terms_by_termid":{"GO:0009102":null}}


id: FYPO:0000776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"},{"relation_name":"is_a","term_name":"normal protein phosphorylation","termid":"FYPO:0004422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during vegetative growth","synonyms":[{"name":"normal protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000776"}


id: GO:1905069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an allantois over time, from its formation to the mature structure.","definition_xrefs":["PMID:17440924","GOC:TermGenie","PMID:21470579","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantois development","synonyms":[{"name":"allantoic bud development","type":"related"}],"termid":"GO:1905069"}


id: FYPO:0003904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal plasma membrane morphology","synonyms":[{"name":"normal plasma membrane morphology during mitotic cell cycle","type":"related"},{"name":"normal plasma membrane morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0003904"}


id: PBO:0088809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec72","termid":"PBO:0088809"}


id: PBO:0003574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Switch One Like","termid":"PBO:0003574"}


id: PBO:0075591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor, Kunitz type 3","termid":"PBO:0075591"}


id: GO:0002613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"}


id: GO:0009420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long (approximately 20 nm), thin external structure of the bacterial-type flagellum, which acts as a propeller.","definition_xrefs":["GOC:cilia","PMID:10572114","GOC:mtg_sensu","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum filament","synonyms":[{"name":"flagellar filament","type":"exact"},{"name":"flagellin-based flagellum filament","type":"exact"}],"termid":"GO:0009420"}


id: _global:increased_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is present to a greater extent than in a preceding phase or process, where the experiment does not distinguish between increased addition and decreased removal of the modification (if this is known use the added_during or removed_during relation).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_during","termid":"_global:increased_during"}


id: GO:1990527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that is involved in the transcriptional regulation of primarily filamentation genes, but also mating genes, in the yeast S. cerevisiae.","definition_xrefs":["GOC:rb","PMID:16782869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Tec1p-Ste12p-Dig1p complex","termid":"GO:1990527"}


id: GO:0110151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of biomineralization (obsolete GO:0110151)","synonyms":[{"name":"positive regulation of biomineral formation","type":"narrow"},{"name":"positive regulation of biomineralisation","type":"exact"},{"name":"positive regulation of mineralisation","type":"exact"},{"name":"positive regulation of mineralization","type":"exact"}],"termid":"GO:0110151"}


id: GO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic primary alcohol + O2 = an aromatic aldehyde + H2O2.","definition_xrefs":["MetaCyc:ARYL-ALCOHOL-OXIDASE-RXN","EC:1.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aryl-alcohol oxidase activity","secondary_identifiers":["RHEA:17541"],"synonyms":[{"name":"arom. alcohol oxidase activity","type":"related"},{"name":"aryl alcohol oxidase activity","type":"related"},{"name":"aryl-alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"veratryl alcohol oxidase activity","type":"narrow"}],"termid":"GO:0047682"}


id: PBO:0047293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2","termid":"PBO:0047293"}


id: PBO:0048917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member M","termid":"PBO:0048917"}


id: PBO:0064390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 12","termid":"PBO:0064390"}


id: GO:0070878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a primary microRNA (pri-miRNA) transcript, an RNA molecule that is processed into a short hairpin-shaped structure called a pre-miRNA and finally into a functional miRNA. Both double-stranded and single-stranded regions of a pri-miRNA are required for binding.","definition_xrefs":["PMID:15531877","PMID:15574589","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"primary miRNA binding","synonyms":[{"name":"pri-miRNA binding","type":"exact"},{"name":"primary microRNA binding","type":"exact"}],"termid":"GO:0070878"}


id: PBO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid13","termid":"PBO:0000705"}


id: GO:0030526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The heterodimeric receptor for granulocyte macrophage colony-stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor complex","synonyms":[{"name":"GM-CSF receptor complex","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor receptor complex","type":"exact"}],"termid":"GO:0030526"}


id: PBO:0071456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 62","termid":"PBO:0071456"}


id: FYPO:0006104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of retrotransposon integration is decreased.","definition_xrefs":["PMID:26358720","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased retrotransposon integration","synonyms":[{"name":"decreased retrotransposon integration during mitotic cell cycle","type":"related"},{"name":"decreased retrotransposon integration during vegetative growth","type":"exact"},{"name":"decreased transposon integration involved in RNA-mediated transposition","type":"exact"},{"name":"reduced retrotransposon integration","type":"exact"}],"termid":"FYPO:0006104"}


id: GO:0016139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"glycosyl compound catabolic process","termid":"GO:1901658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside catabolic process","secondary_identifiers":["GO:0016142"],"synonyms":[{"name":"O-glycoside breakdown","type":"exact"},{"name":"O-glycoside catabolic process","type":"exact"},{"name":"O-glycoside catabolism","type":"exact"},{"name":"O-glycoside degradation","type":"exact"},{"name":"glycoside breakdown","type":"exact"},{"name":"glycoside catabolism","type":"exact"},{"name":"glycoside degradation","type":"exact"}],"termid":"GO:0016139"}


id: GO:0045047
data:
  {"annotated_genes":["SJAG_02867","SJAG_02208","SJAG_01759","SJAG_03737","SJAG_00064","SJAG_00175","SJAG_02588","SJAG_00959","SJAG_00360","SJAG_02354","SJAG_01282","SJAG_02330","SJAG_02456","SJAG_01750","SJAG_01496","SJAG_04129","SJAG_03411","SJAG_03315","SJAG_00603","SJAG_03955","SJAG_01782","SJAG_03684","SJAG_01558","SJAG_01840","SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83900,94563,94616,94789,100663,108753],"is_not":false,"summary":null,"term":"GO:0045047"},{"annotations":[105832,84176,91941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[93539,102349,104501,105537,106602,86806,94250],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[87046,105956,105833,112824,112109,90478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[87828,110552,111309],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[102351,104503,105539,112110,94252,98765],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the endoplasmic reticulum (ER) using signals contained within the protein. One common mechanism uses a 16- to 30-residue signal sequence, typically located at the N-terminus of the protein and containing positively charged amino acids followed by a continuous stretch of hydrophobic residues, which directs the ribosome to the ER membrane and initiates transport of the growing polypeptide across the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to endoplasmic reticulum","termid":"GO:0072599"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01282":null,"SJAG_01496":null,"SJAG_01558":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02456":null,"SJAG_02588":null,"SJAG_02867":null,"SJAG_03315":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03955":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0051179"],"is_obsolete":false,"name":"protein targeting to ER","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein targeting to endoplasmic reticulum","type":"exact"},{"name":"protein-ER targeting","type":"exact"},{"name":"protein-endoplasmic reticulum targeting","type":"exact"}],"termid":"GO:0045047","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0031204":null,"GO:0045047":null}}


id: PBO:0004014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WISH/DIP/SPIN90 ortholog Dip1","termid":"PBO:0004014"}


id: PBO:0043366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain like 1","termid":"PBO:0043366"}


id: PBO:0050064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLF pseudogene 1","termid":"PBO:0050064"}


id: PBO:0072176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 3","termid":"PBO:0072176"}


id: GO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell proliferation","termid":"GO:0070345"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"negatively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of white fat cell proliferation","synonyms":[{"name":"down regulation of white fat cell proliferation","type":"exact"},{"name":"down-regulation of white fat cell proliferation","type":"exact"},{"name":"downregulation of white fat cell proliferation","type":"exact"},{"name":"inhibition of white fat cell proliferation","type":"narrow"},{"name":"negative regulation of white adipocyte proliferation","type":"exact"},{"name":"negative regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070351"}


id: PBO:0057119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203b","termid":"PBO:0057119"}


id: GO:0051627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of epinephrine uptake","termid":"GO:0051626"},{"relation_name":"negatively_regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epinephrine uptake","synonyms":[{"name":"down regulation of epinephrine uptake","type":"exact"},{"name":"down-regulation of epinephrine uptake","type":"exact"},{"name":"downregulation of epinephrine uptake","type":"exact"},{"name":"negative regulation of adrenaline uptake","type":"exact"},{"name":"negative regulation of epinephrine import","type":"exact"}],"termid":"GO:0051627"}


id: RO:0003306
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the frequency of the condition in a population.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_condition","termid":"RO:0003304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_frequency_of_condition","termid":"RO:0003306"}


id: GO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of phosphorylation of viral or host proteins in a host.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein phosphorylation (obsolete GO:0039612)","termid":"GO:0039612"}


id: PR:G2TRS4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.13 gene.","definition_xrefs":["UniProtKB:G2TRS4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C36.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.13","synonyms":[{"name":"Spom972h-SPBC36.13","type":"exact"}],"termid":"PR:G2TRS4"}


id: PBO:0089921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYK family kinase of unknown specificity, implicated in nucleotide metabolism","termid":"PBO:0089921"}


id: PBO:0055302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2729","termid":"PBO:0055302"}


id: GO:1904178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23081848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adipose tissue development","termid":"GO:1904177"},{"relation_name":"negatively_regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adipose tissue development","synonyms":[{"name":"down regulation of adipogenesis","type":"related"},{"name":"down regulation of adipose tissue development","type":"exact"},{"name":"down-regulation of adipogenesis","type":"related"},{"name":"down-regulation of adipose tissue development","type":"exact"},{"name":"downregulation of adipogenesis","type":"related"},{"name":"downregulation of adipose tissue development","type":"exact"},{"name":"inhibition of adipogenesis","type":"related"},{"name":"inhibition of adipose tissue development","type":"narrow"},{"name":"negative regulation of adipogenesis","type":"related"}],"termid":"GO:1904178"}


id: GO:0097415
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion similar to a classical Lewy body but lacking a halo of protein fibrils.","definition_xrefs":["NIF_Subcellular:sao4040591221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cortical Lewy body","termid":"GO:0097415"}


id: GO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novobiocin, a coumarin antibiotic produced by the bacterium Gyrasestreptomyces spheroides, that acts by inhibiting DNA gyrase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"novobiocin metabolic process","termid":"GO:0043641"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"novobiocin biosynthetic process","secondary_identifiers":["Wikipedia:Novobiocin"],"termid":"GO:0043642"}


id: PBO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein","termid":"PBO:0005568"}


id: PBO:0087940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site; human homolog EEF1B2 can complement yeast efb1 mutants","termid":"PBO:0087940"}


id: GO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of the alpha carbon of an encoded N-terminal amino acid, to form pyruvic acid retaining an amide bond between its 1-carboxyl group and the adjacent residue. The pyruvate 2-oxo group may become an enzyme active site, or it may be reduced to an alcohol.","definition_xrefs":["RESID:AA0128","RESID:AA0129","RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deamination","termid":"GO:0018277"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: PR:Q8TFH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein eos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.08","synonyms":[{"name":"Spom972h-eos1","type":"exact"}],"termid":"PR:Q8TFH6"}


id: RO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_skeleton","termid":"RO:0002551"}


id: PBO:0048320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 31","termid":"PBO:0048320"}


id: PBO:0088317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pof1","termid":"PBO:0088317"}


id: PBO:0040134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 18","termid":"PBO:0040134"}


id: PBO:0080294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 58 pseudogene","termid":"PBO:0080294"}


id: PBO:0028367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum","termid":"PBO:0028367"}


id: GO:1904232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aconitate hydratase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","GO_REF:0000059","PMID:18160053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aconitate hydratase activity","synonyms":[{"name":"regulation of aconitase activity","type":"exact"},{"name":"regulation of cis-aconitase activity","type":"exact"},{"name":"regulation of citrate hydro-lyase activity","type":"broad"},{"name":"regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"}],"termid":"GO:1904232"}


id: PBO:0086364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase superfamily protein; non-essential gene; highly expressed under anaeorbic conditions","termid":"PBO:0086364"}


id: GO:1990978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416"],"gene_count":0,"genotype_count":0,"name":"obsolete response to viscosity (obsolete GO:1990978)","termid":"GO:1990978"}


id: PBO:0056715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menin 1","termid":"PBO:0056715"}


id: GO:0016504
data:
  {"annotated_genes":["SJAG_05252","SJAG_00837","SJAG_00591","SJAG_04484","SJAG_04211","SJAG_02625"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70103,74255,76023,77930],"is_not":false,"summary":null,"term":"GO:0016504"},{"annotations":[105510,111445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"peptidase activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-168865"],"synonyms":[{"name":"protease activator activity","type":"narrow"}],"termid":"GO:0016504","terms_by_termid":{"GO:0016504":null,"GO:0061133":null}}


id: GO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of formic acid, HCOOH, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transport","termid":"GO:0015724"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"formic acid secretion","synonyms":[{"name":"formate secretion","type":"exact"}],"termid":"GO:0046721"}


id: PBO:0028983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_acid_phosphatase_activity","termid":"PBO:0028983"}


id: PR:Q9HDZ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immature colon carcinoma transcript 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11075:SF12","OMA:SCHPO01301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 82 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.11","secondary_identifiers":["UniProtKB:Q9HDZ3"],"synonyms":[{"name":"Spom972h-ICT1","type":"exact"}],"termid":"PR:Q9HDZ3"}


id: GO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptidoglycans, any of a class of glycoconjugates found only in bacterial cell walls and consisting of strands of glycosaminoglycan cross-linked by oligopeptides to form a huge and rigid network.","definition_xrefs":["PMID:33139480","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan metabolic process","secondary_identifiers":["GO:0009284"],"synonyms":[{"name":"murein metabolic process","type":"exact"},{"name":"murein metabolism","type":"exact"},{"name":"peptidoglycan metabolism","type":"exact"}],"termid":"GO:0000270"}


id: PR:Q9Y7X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C365.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.16","synonyms":[{"name":"Spom972h-SPBC365.16","type":"exact"}],"termid":"PR:Q9Y7X4"}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: FYPO:0006191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and some of the protein is present in the cytoplasm instead, during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","termid":"FYPO:0004056"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during mitosis","termid":"FYPO:0005672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization in nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"}],"termid":"FYPO:0006191"}


id: PBO:0070136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 50 pseudogene","termid":"PBO:0070136"}


id: PBO:0063221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 1","termid":"PBO:0063221"}


id: GO:0016608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone-releasing hormone, any of a family of peptide hormones that act on the anterior pituitary to stimulate the secretion of growth hormone and exert a trophic effect on the gland.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0005488","GO:0098772","GO:0005515"],"is_obsolete":false,"name":"growth hormone-releasing hormone activity","synonyms":[{"name":"GHRF activity","type":"exact"},{"name":"GHRH activity","type":"exact"}],"termid":"GO:0016608"}


id: PBO:0071944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 21","termid":"PBO:0071944"}


id: PBO:0085563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; mutation confers sensitivity to inhibitors of sphingolipid biosynthesis","termid":"PBO:0085563"}


id: PR:000050536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf3 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PMID:22150589","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf3/Me2(K20)","pombase_gene_id":"SPBC1105.12","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"Spom-hhf3/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf3/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf3 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050536"}


id: GO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of Golgi location","synonyms":[{"name":"maintenance of Golgi apparatus localization","type":"exact"},{"name":"maintenance of Golgi body localization","type":"exact"},{"name":"maintenance of Golgi localization","type":"related"}],"termid":"GO:0051684"}


id: PBO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induced_by","termid":"PBO:0034361"}


id: GO:0020007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A group of cytoskeletal structures and associated membrane-bounded organelles found at the anterior end of adult obligate intracellular protozoan parasites in the phylum Apicomplexa. The apical complex is involved in attachment to and penetration of the host cell, and in parasite proliferation.","definition_xrefs":["GOC:mb","PMID:16518471","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical complex","termid":"GO:0020007"}


id: GO:0045710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of salivary gland boundary specification","termid":"GO:0045705"},{"relation_name":"is_a","term_name":"regulation of larval salivary gland boundary specification","termid":"GO:0045708"},{"relation_name":"negatively_regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of larval salivary gland boundary specification","synonyms":[{"name":"down regulation of larval salivary gland determination","type":"exact"},{"name":"down-regulation of larval salivary gland determination","type":"exact"},{"name":"downregulation of larval salivary gland determination","type":"exact"},{"name":"inhibition of larval salivary gland determination","type":"narrow"},{"name":"negative regulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045710"}


id: PBO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 2","termid":"PBO:0042960"}


id: PBO:0090903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, S. pombe SPBC16G5.19 predicted on opposite strand, one is likely incorrect, similarity detected with tblastn (S. j 4008650-4008727) in the SPBC16G5.19 reading frame, unable to get a CDS.","termid":"PBO:0090903"}


id: GO:0007613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task).","definition_xrefs":["GOC:curators","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning or memory","termid":"GO:0007611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory","secondary_identifiers":["Wikipedia:Memory"],"termid":"GO:0007613"}


id: PBO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 2 (predicted)","termid":"PBO:0001469"}


id: PBO:0036026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_proline","termid":"PBO:0036026"}


id: GO:0097031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I biogenesis (obsolete GO:0097031)","termid":"GO:0097031"}


id: PBO:0068595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 46, pseudogene","termid":"PBO:0068595"}


id: PBO:0072814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9 like","termid":"PBO:0072814"}


id: PBO:0030630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_maltose_carbon_source","termid":"PBO:0030630"}


id: PBO:0066754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 52","termid":"PBO:0066754"}


id: PBO:0088497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1","termid":"PBO:0088497"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: PBO:0048579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 3 pseudogene","termid":"PBO:0048579"}


id: PBO:0005328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR94","termid":"PBO:0005328"}


id: PBO:0055553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2989","termid":"PBO:0055553"}


id: GO:0050637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + acetyl-CoA + 18 H+ + 8 malonyl-CoA + 11 NADPH = S-adenosyl-L-homocysteine + 8 CO2 + 9 CoA + dihydromonacolin L + 6 H2O + 11 NADP+.","definition_xrefs":["EC:2.3.1.161","RHEA:18565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"lovastatin nonaketide synthase activity","secondary_identifiers":["MetaCyc:2.3.1.161-RXN","KEGG_REACTION:R07251"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing, thioester-hydrolysing)","type":"related"}],"termid":"GO:0050637"}


id: GO:0018113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine = D-lysine.","definition_xrefs":["EC:5.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysine racemase activity","secondary_identifiers":["RHEA:22864","MetaCyc:LYSINE-RACEMASE-RXN"],"termid":"GO:0018113"}


id: PATO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001197 modified direction (obsolete PATO:0001197)","termid":"PATO:0001197"}


id: GO:0008940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + acceptor = nitrate + reduced acceptor.","definition_xrefs":["RHEA:21068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrate reductase activity","synonyms":[{"name":"nitrate reductase (acceptor)","type":"related"},{"name":"nitrite:(acceptor) oxidoreductase","type":"related"},{"name":"nitrite:acceptor oxidoreductase","type":"related"},{"name":"respiratory nitrate reductase activity","type":"narrow"}],"termid":"GO:0008940"}


id: MOD:00315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts five L-cysteine residues, an L-histidine residue and a one-nickel four-iron five-sulfur cluster to pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide.","definition_xrefs":["PubMed:11509720","RESID:AA0310","PubMed:2550436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","synonyms":[{"name":"METAL Nickel-iron-sulfur (Ni-4Fe-5S)","type":"exact"},{"name":"METAL Nickel-iron-sulfur (Ni-4Fe-5S); via tele nitrogen","type":"exact"},{"name":"Ni-4Fe-5S cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"mu-1:2kappaS-sulfido-mu3-1:3:5kappaS-sulfido-mu3-2:3:4kappaS-sulfido-mu3-2:4:5kappaS-sulfido-mu3-3:4:5kappaS-sulfido-N1'-histidino-S-cysteinyl-1-iron-S-cysteinyl-2-nickel-3,4,5-tris-(S-cysteinyl iron)","type":"exact"},{"name":"pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","type":"exact"}],"termid":"MOD:00315"}


id: PBO:0083295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene PNO1/YOR145C","termid":"PBO:0083295"}


id: GO:1990718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the 9+2 axoneme, that occurs in most motile cilia, consisting of the projections off of the central pair of single microtubules.","definition_xrefs":["GOC:cilia","PMID:9295136","PMID:21586547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal central apparatus","termid":"GO:1990716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal central pair projection","termid":"GO:1990718"}


id: PBO:0077246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 6","termid":"PBO:0077246"}


id: PBO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0036163"}


id: FYPO:0005031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the lagging strand during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:25664722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on lagging strand","synonyms":[{"name":"increased rNMP incorporation on lagging strand","type":"related"},{"name":"increased rNTP incorporation on lagging strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on lagging strand","type":"exact"}],"termid":"FYPO:0005031"}


id: FYPO:0004694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA is broken into small fragments when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah","PMID:12963726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented DNA during stationary phase","synonyms":[{"name":"DNA fragmentation during stationary phase","type":"exact"},{"name":"fragmented nucleus during stationary phase","type":"related"}],"termid":"FYPO:0004694"}


id: GO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoproturon + H2O = formaldehyde + monodemethylisoproturon + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"isoproturon dimethylaminedehydrogenase activity","secondary_identifiers":["EC:1.5.99.-"],"termid":"GO:0034568"}


id: PR:Q09154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit Rieske, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03211","PANTHER:PTHR10134:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit Rieske, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.06","secondary_identifiers":["UniProtKB:Q09154"],"synonyms":[{"name":"RISP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UQCRFS1","type":"exact"},{"name":"complex III subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rieske iron-sulfur protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase iron-sulfur subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09154"}


id: PBO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 3","termid":"PBO:0045864"}


id: PBO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3321 family","termid":"PBO:0000313"}


id: MOD:00954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues with a covalent bond and the loss of water.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked residues with loss of water","termid":"MOD:00954"}


id: GO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose.","definition_xrefs":["EC:3.2.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase activity","secondary_identifiers":["RHEA:52216","MetaCyc:3.2.1.143-RXN","Reactome:R-HSA-5651828","Reactome:R-HSA-8952903"],"termid":"GO:0004649"}


id: FYPO:0005902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is decreased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","GO:0030048","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of actin filament-based movement","synonyms":[{"name":"decreased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament-based movement during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament-based movement","type":"exact"}],"termid":"FYPO:0005902"}


id: PBO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1","termid":"PBO:0090632"}


id: PBO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 34","termid":"PBO:0071568"}


id: GO:0050636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-epivellosimine + acetyl-CoA = CoA + vinorine.","definition_xrefs":["RHEA:24016","EC:2.3.1.160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"vinorine synthase activity","secondary_identifiers":["MetaCyc:2.3.1.160-RXN","KEGG_REACTION:R05876"],"synonyms":[{"name":"acyl-CoA:16-epivellosimine O-acetyltransferase (cyclizing)","type":"related"}],"termid":"GO:0050636"}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: GO:0008944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of oligopeptides, with broad specificity. Gly or Ala commonly occur as P1 or P1' residues, but more distant residues are also important, as is shown by the fact that Z-Gly-Pro-Gly-Gly-Pro-Ala is cleaved at the Gly-Gly bond, but not Z-(Gly)5.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oligopeptidase A activity (obsolete GO:0008944)","synonyms":[{"name":"68000-M signalpeptide hydrolase activity","type":"related"},{"name":"oligopeptidase A activity","type":"exact"}],"termid":"GO:0008944"}


id: PBO:0049598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 1","termid":"PBO:0049598"}


id: PBO:0091695
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Knockout","termid":"PBO:0091695"}


id: PBO:0041148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 pseudogene 3","termid":"PBO:0041148"}


id: PBO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 3","termid":"PBO:0046022"}


id: GO:0032352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"positively_regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone metabolic process","synonyms":[{"name":"activation of hormone metabolic process","type":"narrow"},{"name":"positive regulation of hormone metabolism","type":"exact"},{"name":"stimulation of hormone metabolic process","type":"narrow"},{"name":"up regulation of hormone metabolic process","type":"exact"},{"name":"up-regulation of hormone metabolic process","type":"exact"},{"name":"upregulation of hormone metabolic process","type":"exact"}],"termid":"GO:0032352"}


id: GO:1902322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["PMID:15340492","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902322"}


id: GO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the specification of a mesodermal fate.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in mesodermal cell fate specification (obsolete GO:0060798)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in mesodermal cell fate specification","type":"exact"}],"termid":"GO:0060798"}


id: GO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a chitin-based cuticle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cuticle","termid":"GO:0042302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}


id: GO:1905875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic density organization.","definition_xrefs":["PMID:21887379","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"negatively_regulates","term_name":"postsynaptic density organization","termid":"GO:0097106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of postsynaptic density organization","synonyms":[{"name":"down regulation of PSD organization","type":"exact"},{"name":"down regulation of post synaptic density organization","type":"exact"},{"name":"down regulation of post-synaptic density organization","type":"exact"},{"name":"down regulation of postsynaptic density organisation","type":"exact"},{"name":"down regulation of postsynaptic density organization","type":"exact"},{"name":"down-regulation of PSD organization","type":"exact"},{"name":"down-regulation of post synaptic density organization","type":"exact"},{"name":"down-regulation of post-synaptic density organization","type":"exact"},{"name":"down-regulation of postsynaptic density organisation","type":"exact"},{"name":"down-regulation of postsynaptic density organization","type":"exact"},{"name":"downregulation of PSD organization","type":"exact"},{"name":"downregulation of post synaptic density organization","type":"exact"},{"name":"downregulation of post-synaptic density organization","type":"exact"},{"name":"downregulation of postsynaptic density organisation","type":"exact"},{"name":"downregulation of postsynaptic density organization","type":"exact"},{"name":"inhibition of PSD organization","type":"narrow"},{"name":"inhibition of post synaptic density organization","type":"narrow"},{"name":"inhibition of post-synaptic density organization","type":"narrow"},{"name":"inhibition of postsynaptic density organisation","type":"narrow"},{"name":"inhibition of postsynaptic density organization","type":"narrow"},{"name":"negative regulation of PSD organization","type":"exact"},{"name":"negative regulation of post synaptic density organization","type":"exact"},{"name":"negative regulation of post-synaptic density organization","type":"exact"},{"name":"negative regulation of postsynaptic density organisation","type":"exact"}],"termid":"GO:1905875"}


id: PBO:0054899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2313","termid":"PBO:0054899"}


id: PBO:0048893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 13, pseudogene","termid":"PBO:0048893"}


id: PBO:0071288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 11","termid":"PBO:0071288"}


id: SO:1000127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000127 sequence_variant_causing_compensatory_transcript_secondary_structure_mutation (obsolete SO:1000127)","synonyms":[{"name":"mutation causing compensatory transcript secondary structure mutation","type":"related"},{"name":"sequence variant causing compensatory transcript secondary structure mutation","type":"exact"}],"termid":"SO:1000127"}


id: PBO:0085070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonfunctional protein with homology to IMP dehydrogenase; blocked reading frame, located close to the telomere; not expressed at detectable levels; YAR073W and YAR075W comprise a continuous reading frame in most strains of S. cerevisiae; YAR073W/YAR075W together have a paralog, IMD2, that arose from a segmental duplication","termid":"PBO:0085070"}


id: PBO:0076480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane anterior posterior transformation 1","termid":"PBO:0076480"}


id: PBO:0016070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic mRNA processing body, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0016070"}


id: PBO:0075290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 30","termid":"PBO:0075290"}


id: PR:Q9URX9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pin2-interacting protein X1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02086","PRO:DNx","PANTHER:PTHR23149:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pxr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.05","secondary_identifiers":["UniProtKB:Q9URX9"],"synonyms":[{"name":"PinX1-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PINX1","type":"exact"}],"termid":"PR:Q9URX9"}


id: PBO:0041900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACN subunit beta associated regulatory protein","termid":"PBO:0041900"}


id: PBO:0055178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2602","termid":"PBO:0055178"}


id: GO:0015857
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84342],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[84694,91742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of uracil, 2,4-dioxopyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"uracil transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015857","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PBO:0051982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 1","termid":"PBO:0051982"}


id: PBO:0054958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2372","termid":"PBO:0054958"}


id: PBO:0081200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 2","termid":"PBO:0081200"}


id: GO:0045208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAPK phosphatase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase export from nucleus (obsolete GO:0045208)","synonyms":[{"name":"MAPK phosphatase export from cell nucleus","type":"exact"},{"name":"MAPK phosphatase export out of nucleus","type":"exact"},{"name":"MAPK phosphatase transport from nucleus to cytoplasm","type":"exact"},{"name":"MAPK phosphatase-nucleus export","type":"exact"}],"termid":"GO:0045208"}


id: FYPO:0002204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that each contain one or more septa, and in which the cell diameter is larger than normal and the cell length is shorter than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, stubby septated cells (obsolete FYPO:0002204)","synonyms":[{"name":"inviable microcolony, stubby septated vegetative cells","type":"exact"}],"termid":"FYPO:0002204"}


id: FYPO:0003583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of formation of foci containing the protein Sad1 is increased during a cellular response to DNA damage.","definition_xrefs":["PMID:24943839","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of Sad1 focus formation during response to DNA damage","synonyms":[{"name":"increased rate of Sad1 focus formation during response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased rate of Sad1 focus formation during response to DNA damage during vegetative growth","type":"exact"},{"name":"increased rate of accumulation of Sad1 foci during DNA damage response","type":"exact"}],"termid":"FYPO:0003583"}


id: PBO:0072757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 7","termid":"PBO:0072757"}


id: GO:0031597
data:
  {"annotated_genes":["SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111363],"is_not":false,"summary":null,"term":"GO:0031597"}]},"cv_name":"cellular_component","definition":"A proteasome complex found in the cytosol of a cell.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"cytosolic proteasome complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031597","terms_by_termid":{"GO:0031597":null}}


id: PBO:0005870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mc","termid":"PBO:0005870"}


id: GO:0033390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine, via the intermediate N-carbamoylputrescine; in this pathway, arginine is converted to agmatine, and agmatine is converted to putrescine in two single enzymatic steps.","definition_xrefs":["GOC:mah","MetaCyc:PWY-43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine biosynthetic process from arginine","termid":"GO:0033388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine via N-carbamoylputrescine","synonyms":[{"name":"putrescine anabolism from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine biosynthesis from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine formation from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine synthesis from arginine via N-carbamoylputrescine","type":"exact"}],"termid":"GO:0033390"}


id: MOD:01038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this represents a free amino acid and the corresponding residue is MOD:01026.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01038 norleucine (Nle) (obsolete MOD:01038)","termid":"MOD:01038"}


id: GO:0009627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The salicylic acid-mediated response to a pathogen which confers broad spectrum resistance.","definition_xrefs":["Wikipedia:Systemic_acquired_resistance","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"systemic acquired resistance","synonyms":[{"name":"salicylic acid-dependent systemic resistance","type":"exact"}],"termid":"GO:0009627"}


id: PBO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: PBO:0089814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex sigma subunit Aps2","termid":"PBO:0089814"}


id: PBO:0059681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 47","termid":"PBO:0059681"}


id: PBO:0064091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNM2 antisense RNA 1","termid":"PBO:0064091"}


id: GO:0098777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein secretion through the outer membrane via the mechanism used for the secretion of curli subunits.","definition_xrefs":["PMID:19299134","PMID:24080089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VIII secretion system","synonyms":[{"name":"T8SS","type":"exact"}],"termid":"GO:0098777"}


id: PR:Q9UT17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.11","synonyms":[{"name":"Spom972h-SPAC9.11","type":"exact"}],"termid":"PR:Q9UT17"}


id: GO:0140527
data:
  {"annotated_genes":["SJAG_02465","SJAG_00908","SJAG_01138","SJAG_02616","SJAG_05333","SJAG_00172","SJAG_00757","SJAG_03567","SJAG_05373","SJAG_03219","SJAG_02267","SJAG_01044","SJAG_05295","SJAG_02311","SJAG_01708","SJAG_00935","SJAG_04303","SJAG_00100","SJAG_02181","SJAG_02822","SJAG_00980","SJAG_04950","SJAG_03720","SJAG_04748","SJAG_00727","SJAG_02592","SJAG_02339","SJAG_01156","SJAG_04205","SJAG_03048","SJAG_02460","SJAG_07002","SJAG_03751","SJAG_03221","SJAG_01677","SJAG_01076","SJAG_00266","SJAG_02708","SJAG_01419","SJAG_01410","SJAG_03525","SJAG_02490","SJAG_00623","SJAG_03438","SJAG_02556","SJAG_02294","SJAG_02652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104159],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[112976,85395,84789,95246,103856],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[107317,86564,101053,104942,105852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[103858,106499],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[89079,106500,84729,93118,96724,97703,113267,103859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[96725,89080,84730],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[104162],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[104550,98562],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[85294],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[93119,86516,104165,85823,96760,96727,86565,88880,101026,111709,113271,97705,85524,114902,90945,103862,100511,87024,100057,84796,102912,85295,89442,101054,87675,107318,88957,96824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007131"},{"annotations":[85402,112467,90577],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[113455,97707,105284,102375,106523,104341,113273,113603,114903],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[112419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"A DNA recombination process that results in the bidirectional exchange of genetic material between highly homologous DNA molecules.","definition_xrefs":["PMID:17846636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous recombination","termid":"GO:0035825"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00266":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02181":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03438":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_04205":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"reciprocal homologous recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140527","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0007131":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: GO:0021834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that guide olfactory bulb interneuron precursors down concentration gradients towards the olfactory bulb.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:cls","PMID:12626695","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration","synonyms":[{"name":"negative chemotaxis involved in embryonic olfactory bulb interneuron precursor migration","type":"exact"}],"termid":"GO:0021834"}


id: PBO:0075717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin pseudogene 1","termid":"PBO:0075717"}


id: PBO:0069775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1059, pseudogene","termid":"PBO:0069775"}


id: FYPO:0002251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and has a larger volume, and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen elongated vegetative cell","synonyms":[{"name":"inviable elongated cell with increased cell volume","type":"exact"},{"name":"inviable enlarged elongated cell","type":"related"},{"name":"inviable large elongated cell","type":"related"},{"name":"inviable swollen elongated cell during vegetative growth","type":"exact"},{"name":"inviable swollen elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002251"}


id: GO:0090545
data:
  {"annotated_genes":["SJAG_03844","SJAG_02778","SJAG_03982","SJAG_00934"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108298,104350,109484,88273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains a subunit from the CHD(Chromodomain helicase DNA-binding) family. The CHD family is characterized by two signature sequence motifs: tandem chromodomains located in the N-terminal region, and the SNF2-like ATPase domain located in the central region of the protein structure.","definition_xrefs":["PMID:17350655","GOC:krc","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CHD-type complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090545","terms_by_termid":{"GO:0070824":null}}


id: PBO:0078185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 2","termid":"PBO:0078185"}


id: GO:0097173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"N-acetylmuramic acid metabolic process","termid":"GO:0097172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-acetylmuramic acid catabolic process","synonyms":[{"name":"N-acetylmuramate breakdown","type":"exact"},{"name":"N-acetylmuramate catabolic process","type":"exact"},{"name":"N-acetylmuramate catabolism","type":"exact"},{"name":"N-acetylmuramate degradation","type":"exact"},{"name":"N-acetylmuramic acid breakdown","type":"exact"},{"name":"N-acetylmuramic acid catabolism","type":"exact"},{"name":"N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097173"}


id: GO:0009610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"},{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to symbiotic fungus","synonyms":[{"name":"response to symbiotic fungi","type":"exact"}],"termid":"GO:0009610"}


id: PBO:0069929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1222, pseudogene","termid":"PBO:0069929"}


id: PBO:0016891
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longer transcript expressed during cold shock due to altered 3'-end processing","termid":"PBO:0016891"}


id: PBO:0069730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1011, pseudogene","termid":"PBO:0069730"}


id: PBO:0087265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr kinase involved in late nuclear division; one of the mitotic exit network (MEN) proteins; necessary for the execution of cytokinesis; also plays a role in regulating the stability of SWI5 and CLB2 mRNAs; DBF20 has a paralog, DBF2, that arose from the whole genome duplication","termid":"PBO:0087265"}


id: PBO:0027559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_glycerol_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0027559"}


id: PBO:0049371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 1","termid":"PBO:0049371"}


id: GO:0048581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-embryonic development","synonyms":[{"name":"down regulation of post-embryonic development","type":"exact"},{"name":"down-regulation of post-embryonic development","type":"exact"},{"name":"downregulation of post-embryonic development","type":"exact"},{"name":"inhibition of post-embryonic development","type":"narrow"}],"termid":"GO:0048581"}


id: PBO:0089573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop56","termid":"PBO:0089573"}


id: GO:1901457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to acetate","termid":"GO:1901457"}


id: PBO:0075484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 2, pseudogene","termid":"PBO:0075484"}


id: PBO:0026755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0026755"}


id: GO:0000703
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92352],"is_not":false,"summary":null,"term":"GO:0000703"},{"annotations":[92346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[92347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal oxidized pyrimidine bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar. The reaction involves formation of a covalent enzyme-pyrimidine base intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110226","GO:0019004","Reactome:R-HSA-110224","Reactome:R-HSA-110227"],"synonyms":[{"name":"DNA glycosylase/AP-lyase","type":"broad"},{"name":"DNA glycosylase/beta-lyase","type":"broad"},{"name":"bifunctional DNA glycosylase","type":"broad"},{"name":"endodeoxyribonuclease III","type":"related"},{"name":"endonuclease III","type":"related"},{"name":"endonuclease VIII activity","type":"related"},{"name":"oxidized pyrimidine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"pyrimidine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0000703","terms_by_termid":{"GO:0000703":null,"GO:0034042":null,"GO:0034043":null}}


id: PBO:0075472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 22","termid":"PBO:0075472"}


id: GO:0050015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kievitone hydrate = H2O + H+ + kievitone.","definition_xrefs":["EC:4.2.1.95","RHEA:23604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"kievitone hydratase activity","secondary_identifiers":["MetaCyc:KIEVITONE-HYDRATASE-RXN","KEGG_REACTION:R03622"],"synonyms":[{"name":"KHase activity","type":"related"},{"name":"kievitone-hydrate hydro-lyase (kievitone-forming)","type":"related"},{"name":"kievitone-hydrate hydro-lyase activity","type":"related"}],"termid":"GO:0050015"}


id: PBO:0076357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 4","termid":"PBO:0076357"}


id: FYPO:0001328
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115417],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115559,115749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115614],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115511],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115245,115479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115418],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytoskeleton organization is abnormal in the vegetative growth phase of the cell cycle.","definition_xrefs":["GO:0007010","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization","termid":"FYPO:0000802"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild 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pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280","SJAG_01143","SJAG_02392","SJAG_03596"],"name":"abnormal cytoskeleton organization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_02392","SJAG_04280","SJAG_03596","SJAG_04703","SJAG_04522","SJAG_01143"],"single_locus_genotype_uniquenames":["sty1delta","for3delta","pom1delta","rga4delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal cytoskeleton organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001328","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0075637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2G","termid":"PBO:0075637"}


id: PBO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.36","termid":"PBO:0001114"}


id: PBO:0080503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound and keratinocyte migration associated lncRNA 2","termid":"PBO:0080503"}


id: PBO:0089184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps51","termid":"PBO:0089184"}


id: GO:0045741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"positive regulation of protein tyrosine kinase activity","termid":"GO:0061098"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor-activated receptor activity","synonyms":[{"name":"activation of epidermal growth factor receptor activity","type":"narrow"},{"name":"positive regulation of EGF receptor activity","type":"exact"},{"name":"positive regulation of EGFR activity","type":"exact"},{"name":"positive regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"stimulation of epidermal growth factor receptor activity","type":"narrow"},{"name":"up regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"upregulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0045741"}


id: PBO:0080110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2","termid":"PBO:0080110"}


id: PBO:0076325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYP antisense RNA 1","termid":"PBO:0076325"}


id: PBO:0052412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1","termid":"PBO:0052412"}


id: PBO:0063015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 3","termid":"PBO:0063015"}


id: GO:1905710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["PMID:27482894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane permeability","termid":"GO:1905710"}


id: GO:0016076
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88452,109461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of snRNA, small nuclear RNA, low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"snRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snRNA breakdown","type":"exact"},{"name":"snRNA catabolism","type":"exact"},{"name":"snRNA degradation","type":"exact"}],"termid":"GO:0016076","terms_by_termid":{"GO:0071037":null}}


id: PBO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Slt1","termid":"PBO:0002138"}


id: GO:0097148
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex consisting of BCL-2, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:bhm","GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BCL-2 complex","termid":"GO:0097148"}


id: PBO:0060189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 7, secreted","termid":"PBO:0060189"}


id: PBO:0088464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER UDP-N-acetylglucosamine transmembrane transporter","termid":"PBO:0088464"}


id: PBO:0056388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK activated protein kinase 3","termid":"PBO:0056388"}


id: PBO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nucleotide exchange factor synembryn family","termid":"PBO:0012285"}


id: PBO:0111899
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain","termid":"PBO:0111899"}


id: PBO:0082782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the telomerase holoenzyme; involved in telomere replication; synthesis of the full-length protein results from a programmed +1 ribosomal frameshift","termid":"PBO:0082782"}


id: PBO:0045952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 8","termid":"PBO:0045952"}


id: PBO:0061365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 25","termid":"PBO:0061365"}


id: GO:0110129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A histone deacetylase complex formed by the association of an HP1 protein with a SHREC complex. The SHREC2 complex is required for deacetylation of H3K14, and mediates transcriptional gene silencing by limiting RNA polymerase II access to heterochromatin. In fission yeast, the complex contains the SHREC subunits Clr1, Clr2, Clr3, and Mit1, and the HP1 protein Chp2.","definition_xrefs":["PMID:19111658","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SHREC2 complex (obsolete GO:0110129)","termid":"GO:0110129"}


id: PBO:0066331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN3 antisense RNA","termid":"PBO:0066331"}


id: PBO:0055958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 72","termid":"PBO:0055958"}


id: PBO:0054834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2248","termid":"PBO:0054834"}


id: GO:0006905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle transport (obsolete GO:0006905)","synonyms":[{"name":"vesicle transport","type":"exact"}],"termid":"GO:0006905"}


id: PBO:0027502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_MTT","termid":"PBO:0027502"}


id: PBO:0076228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1","termid":"PBO:0076228"}


id: GO:0032091
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91490,101327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"},{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein binding","type":"exact"},{"name":"down-regulation of protein binding","type":"exact"},{"name":"downregulation of protein binding","type":"exact"},{"name":"inhibition of protein binding","type":"narrow"}],"termid":"GO:0032091","terms_by_termid":{"GO:1904530":null}}


id: GO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases autophagosome size.","definition_xrefs":["GOC:go_curators","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"positive regulation of autophagosome size","synonyms":[{"name":"activation of autophagic vacuole size","type":"narrow"},{"name":"positive regulation of autophagic vacuole size","type":"exact"},{"name":"stimulation of autophagic vacuole size","type":"narrow"},{"name":"up regulation of autophagic vacuole size","type":"exact"},{"name":"up-regulation of autophagic vacuole size","type":"exact"},{"name":"upregulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045772"}


id: GO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:kmv","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"}


id: GO:0071129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to lipid phosphate phosphohydrolase-3.","definition_xrefs":["PMID:16099422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-LPP3 complex","synonyms":[{"name":"ITGAV-ITGB3-PPAP2B complex","type":"narrow"}],"termid":"GO:0071129"}


id: GO:0044046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance that is released by the other organism. This includes substances that are released via pathogen cell lysis.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released outside of symbiont (obsolete GO:0044046)","synonyms":[{"name":"interaction with host via substance released outside of symbiont cells","type":"exact"}],"termid":"GO:0044046"}


id: PBO:0090241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1","termid":"PBO:0090241"}


id: GO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071851)","synonyms":[{"name":"G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:0071851"}


id: PBO:0058949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67 pseudogene 1","termid":"PBO:0058949"}


id: PBO:0013125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Luc7","termid":"PBO:0013125"}


id: PBO:0076770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 9","termid":"PBO:0076770"}


id: PBO:0073581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2B","termid":"PBO:0073581"}


id: PBO:0060131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 32","termid":"PBO:0060131"}


id: PBO:0077998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 2","termid":"PBO:0077998"}


id: FYPO:0003991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is higher than normal when the population in which the cell is found is in stationary phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level in stationary phase","synonyms":[{"name":"increased RNA accumulation in stationary phase","type":"related"},{"name":"increased transcript level in stationary phase","type":"exact"}],"termid":"FYPO:0003991"}


id: PBO:0075817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 1","termid":"PBO:0075817"}


id: PBO:0040812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like cargo adaptor 1","termid":"PBO:0040812"}


id: PBO:0082143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of meiotic anaphase promoting complex (APC/C); Cdc20p family member; required for initiation of spore wall assembly; required for Clb1p degradation during meiosis; prevents premature assembly of the meiosis I spindle, required for DSB induced prophase I arrest","termid":"PBO:0082143"}


id: PBO:0074424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 23","termid":"PBO:0074424"}


id: PBO:0029532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_septum","termid":"PBO:0029532"}


id: GO:0006121
data:
  {"annotated_genes":["SJAG_02398","SJAG_00260","SJAG_03920","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85051,85417,109392,112935],"is_not":false,"summary":null,"term":"GO:0006121"}]},"cv_name":"biological_process","definition":"The transfer of electrons from succinate to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex II.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, succinate to ubiquinone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex II (succinate to ubiquinone)","type":"related"},{"name":"mitochondrial electron transport, succinate to coenzyme Q","type":"exact"},{"name":"oxidative phosphorylation, succinate to ubiquinone","type":"exact"}],"termid":"GO:0006121","terms_by_termid":{"GO:0006121":null}}


id: PR:G2TRK9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.14","synonyms":[{"name":"Spom972h-new13","type":"exact"}],"termid":"PR:G2TRK9"}


id: PBO:0016104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit Toa2 (predicted)","termid":"PBO:0016104"}


id: GO:0030377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the urokinase plasminogen activator to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:16456079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"urokinase plasminogen activator receptor activity","secondary_identifiers":["Wikipedia:Urokinase_receptor"],"synonyms":[{"name":"U-plasminogen activator receptor activity","type":"exact"},{"name":"uPAR","type":"exact"},{"name":"urokinase plasminogen activator receptor","type":"exact"}],"termid":"GO:0030377"}


id: PBO:0069933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1226, pseudogene","termid":"PBO:0069933"}


id: GO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + S-adenosyl-L-methionine(1+) = (S)-tetrahydrocolumbamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:23808","EC:2.1.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"(S)-scoulerine 9-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.117-RXN","KEGG_REACTION:R03835"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-scoclaurine 9-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(S)-scoulerine 9-O-methyltransferase activity","type":"related"}],"termid":"GO:0030777"}


id: GO:0098910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrial cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"}


id: MOD:00711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups, after a proton has been added to form an aminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated protonated-residue","synonyms":[{"name":"Me3+Res","type":"exact"}],"termid":"MOD:00711"}


id: PBO:0039300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG13 antisense RNA 1","termid":"PBO:0039300"}


id: PBO:0043182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 2","termid":"PBO:0043182"}


id: PBO:0044886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"density regulated re-initiation and release factor","termid":"PBO:0044886"}


id: PBO:0110480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 7","termid":"PBO:0110480"}


id: PBO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like","termid":"PBO:0048671"}


id: GO:0072653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-omega due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:15546383","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interferon-omega production","secondary_identifiers":["GO:0072654"],"synonyms":[{"name":"IFN-omega production","type":"exact"},{"name":"IFNW production","type":"exact"},{"name":"interferon-omega secretion","type":"narrow"}],"termid":"GO:0072653"}


id: PBO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A9","termid":"PBO:0044101"}


id: PBO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74B pseudogene 1","termid":"PBO:0042019"}


id: GO:0047240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-(1->4)-beta-D-glucosyl-R + UDP-D-galactose = D-galactosyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-R + H+ + UDP.","definition_xrefs":["EC:2.4.1.179","RHEA:18413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"lactosylceramide beta-1,3-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.179-RXN","KEGG_REACTION:R04431"],"synonyms":[{"name":"UDP-galactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-lactosylceramide beta1->3-galactosyltransferase activity","type":"related"}],"termid":"GO:0047240"}


id: PBO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F3 intronic transcript 1","termid":"PBO:0045716"}


id: FYPO:0003453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleus","synonyms":[{"name":"ectopic protein localization to nucleus","type":"exact"},{"name":"protein mislocalised to nucleus","type":"exact"}],"termid":"FYPO:0003453"}


id: PBO:0004156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, SYF2 family (predicted)","termid":"PBO:0004156"}


id: PATO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark blue","termid":"PATO:0001244"}


id: PBO:0074224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 3","termid":"PBO:0074224"}


id: FYPO:0007044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is decreased during a cellular stress response to zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased alkaline phosphatase activity","termid":"FYPO:0007042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased alkaline phosphatase activity during stress response to zinc ion","synonyms":[{"name":"decreased alkaline phosphatase activity during cellular response to excess zinc","type":"exact"},{"name":"decreased alkaline phosphatase activity during cellular response to high zinc level","type":"exact"},{"name":"decreased alkaline phosphatase activity during cellular response to replete zinc","type":"related"},{"name":"decreased alkaline phosphatase activity during cellular stress response to zinc ion","type":"exact"},{"name":"decreased alkaline phosphatase activity during response to zinc ion stress","type":"exact"},{"name":"decreased alkaline phosphatase activity during response to zinc toxicity","type":"related"},{"name":"decreased alkaline phosphatase activity during stress response to zinc","type":"broad"},{"name":"reduced alkaline phosphatase activity during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007044"}


id: PBO:0044429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 11","termid":"PBO:0044429"}


id: GO:0071940
data:
  {"annotated_genes":["SJAG_00974","SJAG_03483","SJAG_01321","SJAG_03013","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87968,113928,86475,110269,84461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a fungal-type cell wall.","definition_xrefs":["PMID:19646873","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall organization","termid":"GO:0031505"},{"relation_name":"is_a","term_name":"cell wall assembly","termid":"GO:0070726"},{"relation_name":"part_of","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03483":null,"SJAG_04238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"fungal-type cell wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall formation","type":"related"}],"termid":"GO:0071940","terms_by_termid":{"GO:0030476":null}}


id: MOD:00158
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tryptophan residues by a carbon-carbon bond to form 4'-(L-tryptophan)-L-tryptophyl quinone.","definition_xrefs":["ChEBI:20251","DeltaMass:0","RESID:AA0149","PubMed:2028257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-(L-tryptophan)-L-tryptophyl quinone","synonyms":[{"name":"2,4-BisTrp-6,7-dione (from Tryptophan)","type":"exact"},{"name":"2-amino-3-[2-[2-amino-3-(2-carboxyethyl)-6,7-dioxo-1H-indol-4-yl]-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-4-(3-[(2S)-2-amino-2-carboxyethyl]-1H-indol-2-yl)-6,7-indolinedione","type":"exact"},{"name":"4'-tryptophan-tryptophylquinone","type":"exact"},{"name":"4-(2'-tryptophyl)tryptophan-6,7-dione","type":"exact"},{"name":"4-(L-tryptophan-2-yl)-L-tryptophyl quinone","type":"exact"},{"name":"CROSSLNK Tryptophan tryptophylquinone (Trp-Trp)","type":"exact"},{"name":"TTQ","type":"exact"},{"name":"XLNK-4'Trp-TrpQ","type":"exact"},{"name":"alpha,alpha'-diamino-6',7'-dihydro-6',7'-dioxo-(2,4'-bi-1H-indole)-3,3'-dipropanoic acid","type":"exact"}],"termid":"MOD:00158"}


id: PBO:0042194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3 pseudogene 1","termid":"PBO:0042194"}


id: GO:0044104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NAD+ + H2O = 2-oxoglutarate + NADH + H+.","definition_xrefs":["PMID:17202142","PMID:16835232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NAD+) activity","synonyms":[{"name":"2,5-dioxopentanoate dehydrogenase (NAD+) activity","type":"exact"},{"name":"2,5-dioxopentanoate:NAD+ 5-oxidoreductase activity","type":"exact"}],"termid":"GO:0044104"}


id: PBO:0087271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase and subunit of TFIIK, a TFIIH subassembly; phosphorylates the C-terminal domain (CTD) of RNAPII (Ser5 and Ser7); facilitates recruitment of mRNA 5'-capping and polyadenylation factors to the RNAPII holoenzyme complex; minor role in RNAPII transcription; role in RNAPI transcription; regulates Atg1p kinase complex assembly during nitrogen starvation induced autophagy; associates with cyclin Ccl1p; relocalizes to the cytosol in response to hypoxia; ortholog of human CDK7","termid":"PBO:0087271"}


id: PBO:0091857
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PFDN5","termid":"PBO:0091857"}


id: GO:0102695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + cis-zeatin-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:cis-zeatin 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4733"],"termid":"GO:0102695"}


id: PR:Q10430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Spc25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14281:SF0","OMA:SCHPO04698","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.04c","secondary_identifiers":["UniProtKB:Q10430"],"synonyms":[{"name":"Spom972h-SPC25","type":"exact"}],"termid":"PR:Q10430"}


id: FYPO:0005190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to L-arginine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein phosphorylation during cellular response to arginine (obsolete FYPO:0005190)","synonyms":[{"name":"normal protein phosphorylation during cellular response to L-arginine","type":"exact"},{"name":"normal protein phosphorylation during cellular response to arginine during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to arginine during vegetative growth","type":"exact"}],"termid":"FYPO:0005190"}


id: PBO:0110266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrt1","termid":"PBO:0110266"}


id: PR:Q7Z995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.18c","synonyms":[{"name":"Spom972h-SPBC19G7.18c","type":"exact"}],"termid":"PR:Q7Z995"}


id: PBO:0078651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 4-1","termid":"PBO:0078651"}


id: GO:1990828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hepatocyte (specialized epithelial cell of the liver) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["PMID:20102719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation","termid":"GO:0043697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte dedifferentiation","termid":"GO:1990828"}


id: PBO:0005552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup211","termid":"PBO:0005552"}


id: PBO:0031532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031532"}


id: GO:1901567
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fatty acid derivative binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901567","terms_by_termid":{"GO:0036042":null}}


id: PBO:0053954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1259","termid":"PBO:0053954"}


id: FYPO:0003107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal, and that continue to decrease in length over successive generations.","definition_xrefs":["PomBase:mah","PMID:24013504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shortened telomeres during vegetative growth","termid":"FYPO:0002239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"progressively shortening telomeres during vegetative growth","synonyms":[{"name":"progressively decreasing telomere length during vegetative growth","type":"exact"},{"name":"progressively shortening telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003107"}


id: PBO:0089622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18","termid":"PBO:0089622"}


id: PBO:0047781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXD2 adjacent opposite strand RNA 1","termid":"PBO:0047781"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: PBO:0038551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 6","termid":"PBO:0038551"}


id: PBO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 6","termid":"PBO:0060484"}


id: PBO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphate transferase subunits alpha and beta","termid":"PBO:0048846"}


id: PBO:0025462
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase deficiency","termid":"PBO:0025462"}


id: PBO:0089394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx2","termid":"PBO:0089394"}


id: PBO:0012592
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPT1","termid":"PBO:0012592"}


id: GO:0000048
data:
  {"annotated_genes":["SJAG_04689","SJAG_03636","SJAG_01413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95287,97278,98118],"is_not":false,"summary":null,"term":"GO:0000048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-tRNA(1) + aminoacyl-tRNA(2) = tRNA(1) + peptidylaminoacyl-tRNA(2). This reaction is catalyzed by a ribozyme.","definition_xrefs":["PMID:11433365","PMID:9242921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01413":null,"SJAG_03636":null,"SJAG_04689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746","GO:0140098","GO:0140101","GO:0140096"],"is_obsolete":false,"name":"peptidyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PEPTIDYLTRANSFERASE-RXN","EC:2.3.2.12","Reactome:R-HSA-156912"],"termid":"GO:0000048","terms_by_termid":{"GO:0000048":null}}


id: GO:0051887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"exogen","termid":"GO:0042638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of exogen","synonyms":[{"name":"regulation of exogen","type":"related"}],"termid":"GO:0051887"}


id: PR:O42926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1302 gene.","definition_xrefs":["UniProtKB:O42926","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.02c","synonyms":[{"name":"Spom972h-vps1302","type":"exact"}],"termid":"PR:O42926"}


id: GO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein transport within plasma membrane","termid":"GO:0099632"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein transport out of plasma membrane raft","termid":"GO:0044862"}


id: RO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has direct input c iff c is a participant in p, c is present at the start of p, and the state of c is modified during p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_direct_input","termid":"RO:0002400"}


id: GO:0046700
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id: GO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tellurium ion","termid":"GO:0046690"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tellurium ion","synonyms":[{"name":"cellular response to tellurium","type":"exact"}],"termid":"GO:0071293"}


id: PBO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl ester lipase","termid":"PBO:0042693"}


id: PBO:0083842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0083842"}


id: GO:0006494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein amino acid glycosylation process in which a sugar unit is added to a free alpha-amino or alpha-carboxyl terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal glycosylation (obsolete GO:0006494)","synonyms":[{"name":"protein amino acid terminal glycosylation","type":"exact"}],"termid":"GO:0006494"}


id: PBO:0088421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9","termid":"PBO:0088421"}


id: GO:0009234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the menaquinones. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones that have vitamin K activity and are known as vitamin K2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menaquinone metabolic process","termid":"GO:0009233"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"menaquinone biosynthetic process","secondary_identifiers":["MetaCyc:MENAQUINONESYN-PWY"],"synonyms":[{"name":"menaquinone anabolism","type":"exact"},{"name":"menaquinone biosynthesis","type":"exact"},{"name":"menaquinone formation","type":"exact"},{"name":"menaquinone synthesis","type":"exact"},{"name":"menatetrenone biosynthesis","type":"exact"},{"name":"menatetrenone biosynthetic process","type":"exact"},{"name":"multiprenylmenaquinone biosynthesis","type":"exact"},{"name":"multiprenylmenaquinone biosynthetic process","type":"exact"},{"name":"vitamin K2 biosynthesis","type":"exact"},{"name":"vitamin K2 biosynthetic process","type":"exact"}],"termid":"GO:0009234"}


id: FYPO:0006022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiotic cell cycle","termid":"FYPO:0006406"},{"relation_name":"output_of","term_name":"abnormal prospore-specific spindle pole body remodeling","termid":"FYPO:0003561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000121","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiosis I","synonyms":[{"name":"abnormal SPB morphology during meiosis I","type":"exact"},{"name":"abnormal spindle pole body morphology during first meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body structure during meiosis I","type":"narrow"}],"termid":"FYPO:0006022"}


id: PATO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An 1-D extent quality inhering in two-dimensional bearer by virtue of being equal to the distance around it.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Perimeter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perimeter","termid":"PATO:0001711"}


id: PBO:0081721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF649 antisense RNA 1","termid":"PBO:0081721"}


id: PBO:0050431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 2","termid":"PBO:0050431"}


id: PBO:0071226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 67","termid":"PBO:0071226"}


id: PBO:0067537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 681, pseudogene","termid":"PBO:0067537"}


id: GO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["RESID:AA0247","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"keratan sulfate metabolic process","termid":"GO:0042339"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"keratan sulfate biosynthetic process","synonyms":[{"name":"keratan sulfate anabolism","type":"exact"},{"name":"keratan sulfate biosynthesis","type":"exact"},{"name":"keratan sulfate formation","type":"exact"},{"name":"keratan sulfate synthesis","type":"exact"},{"name":"keratan sulphate biosynthesis","type":"exact"},{"name":"keratan sulphate biosynthetic process","type":"exact"}],"termid":"GO:0018146"}


id: PATO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fragility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fragile","termid":"PATO:0001362"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fragility","termid":"PATO:0002055"}


id: PBO:0071516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 19","termid":"PBO:0071516"}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: PR:O74421
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-demethylubiquinone-9 3-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04732","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis O-methyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.05","secondary_identifiers":["UniProtKB:O74421"],"synonyms":[{"name":"3-demethylubiquinol 3-O-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubiG","type":"exact"},{"name":"polyprenyldihydroxybenzoate methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74421"}


id: FYPO:0003752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002403","FYPO:0006551"],"is_obsolete":false,"name":"increased total nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"increased level of bulk nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased level of total nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased nuclear bulk poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"increased total nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"increased total nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"},{"name":"total nuclear poly(A)+ mRNA accumulation","type":"related"},{"name":"total nuclear poly-A mRNA accumulation","type":"related"}],"termid":"FYPO:0003752"}


id: PBO:0047021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24, pseudogene","termid":"PBO:0047021"}


id: PBO:0036537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic R3H and G-patch domain protein Sqs2","termid":"PBO:0036537"}


id: GO:1990559
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87049],"is_not":false,"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11158296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transmembrane transport","termid":"GO:0035349"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990559","terms_by_termid":{"GO:1990559":null}}


id: FYPO:0003669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which RNA splicing does not take place at a set of splice sites that are normally used, such that an exon is omitted from the mature RNA.","definition_xrefs":["PMID:17130122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered splice site specificity","termid":"FYPO:0003467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"exon skipping","synonyms":[{"name":"increased exon skipping","type":"exact"}],"termid":"FYPO:0003669"}


id: PBO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase (predicted)","termid":"PBO:0001126"}


id: PR:O42933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.09","secondary_identifiers":["UniProtKB:O42933"],"synonyms":[{"name":"SPBC16C6.09","type":"related"},{"name":"Spom972h-POMT1","type":"exact"},{"name":"oma4","type":"related"}],"termid":"PR:O42933"}


id: PBO:0073379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 3","termid":"PBO:0073379"}


id: GO:0102557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (20S)-protopanaxadiol + O2 + NADPH(4-) + H+ = protopanaxatriol + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.14.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protopanaxadiol 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14978","RHEA:22272"],"termid":"GO:0102557"}


id: GO:0044598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving doxorubicin, an anthracycline antibiotic, used in cancer chemotherapy.","definition_xrefs":["PMID:10200167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"doxorubicin metabolic process","termid":"GO:0044598"}


id: PR:O94644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction of telomere capping protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.02","synonyms":[{"name":"Spom972h-rtc5","type":"exact"}],"termid":"PR:O94644"}


id: PBO:0062678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily K member 1","termid":"PBO:0062678"}


id: GO:0036473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to an oxidative stress stimulus.","definition_xrefs":["GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to oxidative stress (obsolete GO:0036473)","termid":"GO:0036473"}


id: MOD:01040
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a penicillamine.","definition_xrefs":["DeltaMass:154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penicillamine residue","synonyms":[{"name":"2-amino-3-mercapto-3-methylbutanoic acid","type":"exact"},{"name":"2-amino-3-methyl-3-sulfanylbutanoic acid","type":"exact"},{"name":"3,3-dimethylcysteine","type":"exact"},{"name":"3-mercapto-L-valine","type":"exact"},{"name":"Pen","type":"exact"},{"name":"beta,beta-dimethylcysteine","type":"exact"}],"termid":"MOD:01040"}


id: MOD:00775
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"An artifactual protein modification that converts an L-histidine residue to L-asparagine by oxidative degradation.","definition_xrefs":["OMSSA:54","PubMed:9252331","Unimod:348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine residue","termid":"MOD:00012"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine (His)","synonyms":[{"name":"His->Asn","type":"related"},{"name":"his2asnh","type":"exact"},{"name":"histidine oxidation to aspargine","type":"related"}],"termid":"MOD:00775"}


id: PBO:0052016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 6, arginine demethylase and lysine hydroxylase","termid":"PBO:0052016"}


id: PBO:0048650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein gamma 3","termid":"PBO:0048650"}


id: PBO:0016968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly protein (predicted)","termid":"PBO:0016968"}


id: PBO:0052675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 43","termid":"PBO:0052675"}


id: FYPO:0003756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has more than one mitotic spindle, and mitotic sister chromatid separation does not occur.","definition_xrefs":["PomBase:mah","PMID:8978688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"multiple mitotic spindles","termid":"FYPO:0003754"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000054","FYPO:0000337","FYPO:0000120"],"is_obsolete":false,"name":"multiple mitotic spindles with abolished sister chromatid separation","synonyms":[{"name":"multiple mitotic spindles with abolished chromosome separation","type":"exact"},{"name":"multiple mitotic spindles with abolished sister chromatid segregation","type":"related"},{"name":"multiple mitotic spindles with abolished sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"multiple mitotic spindles with abolished sister chromatid separation during vegetative growth","type":"exact"}],"termid":"FYPO:0003756"}


id: PBO:0052152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 2","termid":"PBO:0052152"}


id: GO:0052629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate + 2 H+.","definition_xrefs":["RHEA:39019","PMID:19901554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol-3,5-bisphosphate phosphatase activity","termid":"GO:0106018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1676065","Reactome:R-HSA-6809320","Reactome:R-HSA-6809944","EC:3.1.3.95","Reactome:R-HSA-1676105","Reactome:R-HSA-6809778","MetaCyc:RXN-10958","Reactome:R-HSA-1676203"],"termid":"GO:0052629"}


id: GO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + H2O + O2 = imidazole-4-acetaldehyde + NH3 + hydrogen peroxide + H+.","definition_xrefs":["MetaCyc:RXN-9600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histamine oxidase activity","secondary_identifiers":["KEGG_REACTION:R02150","Reactome:R-HSA-5696131","EC:1.4.3.22","RHEA:25625"],"synonyms":[{"name":"1H-Imidazole-4-ethanamine oxidase activity","type":"exact"},{"name":"1H-Imidazole-4-ethanamine:oxygen oxidoreductase (deaminating) activity","type":"exact"},{"name":"histamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052598"}


id: GO:0120153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a carbohydrate in the presence of calcium.","definition_xrefs":["PMID:25912189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcium-dependent carbohydrate binding","termid":"GO:0120153"}


id: GO:0050838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of 5-hydroxy-L-lysine to form peptidyl-N6,N6,N6-trimethyl-5-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-5-hydroxy-L-lysine trimethylation","termid":"GO:0050838"}


id: PBO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 1","termid":"PBO:0044161"}


id: PBO:0041871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium sensing receptor","termid":"PBO:0041871"}


id: PR:Q9Y7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.04 gene.","definition_xrefs":["UniProtKB:Q9Y7S3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C569.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.04","synonyms":[{"name":"Spom972h-SPCC569.04","type":"exact"}],"termid":"PR:Q9Y7S3"}


id: PBO:0081295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75D","termid":"PBO:0081295"}


id: PBO:0047709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 3","termid":"PBO:0047709"}


id: PBO:0058701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6829","termid":"PBO:0058701"}


id: PBO:0057146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR223 host gene","termid":"PBO:0057146"}


id: PBO:0073692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 4","termid":"PBO:0073692"}


id: PBO:0078096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 4","termid":"PBO:0078096"}


id: PBO:0028784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA-derived_small_RNA_level","termid":"PBO:0028784"}


id: PBO:0108975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule associated protein 2","termid":"PBO:0108975"}


id: PBO:0049883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 2","termid":"PBO:0049883"}


id: GO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the diameter of a blood vessel is changed due to activity of the renin-angiotensin system.","definition_xrefs":["GOC:pr","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal control of peripheral vascular resistance involved in regulation of systemic arterial blood pressure","termid":"GO:0003072"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"},{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of blood vessel diameter homeostasis by renin-angiotensin","synonyms":[{"name":"regulation of blood vessel diameter by renin-angiotensin","type":"exact"},{"name":"regulation of blood vessel size by renin-angiotensin","type":"broad"},{"name":"renin-angiotensin regulation of blood vessel size","type":"broad"}],"termid":"GO:0002034"}


id: PBO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_malate_import","termid":"PBO:0030492"}


id: PBO:0044841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 129","termid":"PBO:0044841"}


id: PBO:0064823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3E","termid":"PBO:0064823"}


id: PBO:0049552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 14","termid":"PBO:0049552"}


id: PBO:0091756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2049892delT","termid":"PBO:0091756"}


id: GO:0102740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: theobromine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.160","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity","secondary_identifiers":["RHEA:20944","MetaCyc:RXN-7599"],"termid":"GO:0102740"}


id: FYPO:0003607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"abnormal spindle morphology","synonyms":[{"name":"spindle morphology: abnormal","type":"related"}],"termid":"FYPO:0003607"}


id: PBO:0065703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 1","termid":"PBO:0065703"}


id: PBO:0064989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC1 antisense RNA 1","termid":"PBO:0064989"}


id: PBO:0044848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131C (pseudogene)","termid":"PBO:0044848"}


id: PBO:0068222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 529","termid":"PBO:0068222"}


id: GO:0044737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of an acid-sensing ion channel (ASIC) in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of acid-sensing ion channel in another organism","synonyms":[{"name":"modulation of acid-sensing ion channel in other organism","type":"exact"},{"name":"regulation of ASIC channel in other organism","type":"exact"},{"name":"regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044737"}


id: PBO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 2","termid":"PBO:0047711"}


id: PBO:0041776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 15","termid":"PBO:0041776"}


id: PR:O13666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(7)-sterol 5(6)-desaturase erg32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.03c","synonyms":[{"name":"C-5 sterol desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg32","type":"exact"},{"name":"ergosterol Delta(5,6) desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sterol-C5-desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13666"}


id: GO:0018926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanesulfonic acid, a strong acid produced by the oxidation of dimethyl sulfide.","definition_xrefs":["UM-BBD_pathwayID:msa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"methanesulfonic acid metabolic process","synonyms":[{"name":"methanesulfonic acid metabolism","type":"exact"},{"name":"methanesulphonic acid metabolic process","type":"exact"},{"name":"methanesulphonic acid metabolism","type":"exact"}],"termid":"GO:0018926"}


id: PBO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter A, lysophospholipid","termid":"PBO:0056804"}


id: PBO:0090450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl1","termid":"PBO:0090450"}


id: SO:0000481
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inverted repeat (SO:0000294) occurring at the termini of a DNA transposon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted_repeat","termid":"SO:0000294"},{"relation_name":"part_of","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_inverted_repeat","synonyms":[{"name":"TIR","type":"exact"},{"name":"terminal inverted repeat","type":"exact"}],"termid":"SO:0000481"}


id: GO:0045343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of MHC class I biosynthetic process","synonyms":[{"name":"regulation of MHC class I anabolism","type":"exact"},{"name":"regulation of MHC class I biosynthesis","type":"exact"},{"name":"regulation of MHC class I formation","type":"exact"},{"name":"regulation of MHC class I synthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045343"}


id: GO:0006341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin insulator sequence binding (obsolete GO:0006341)","synonyms":[{"name":"chromatin insulator sequence binding","type":"exact"}],"termid":"GO:0006341"}


id: GO:0033208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylgalactosamine + N-acetylneuraminyl-alpha-2,3-galactosyl-beta-oligosaccharide = UDP + N-acetylgalactosaminyl-N-acetylneuraminyl-alpha-2,3-galactosyl-beta-oligosaccharide.","definition_xrefs":["PMID:12678917","GOC:mah","PMID:16024623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-1,4-N-acetylgalactosaminyltransferase activity","termid":"GO:0033207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine:N-acetylneuraminyl-alpha-2,3-galactosyl-beta-R 1,4-N-acetylgalactosaminyltransferase activity","synonyms":[{"name":"Sda beta 1,4GalNAc transferase","type":"related"},{"name":"UDP-GalNAc:Neu5Ac-alpha-2-Gal-beta-1-R beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"}],"termid":"GO:0033208"}


id: GO:1990383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of biotin.","definition_xrefs":["PMID:12557275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotin starvation","termid":"GO:1990383"}


id: PBO:0058451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5090","termid":"PBO:0058451"}


id: PBO:0078886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-3","termid":"PBO:0078886"}


id: PBO:0064934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPT2-EGFL8 readthrough (NMD candidate)","termid":"PBO:0064934"}


id: GO:1905934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell fate determination.","definition_xrefs":["PMID:25793578","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"negatively_regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell fate determination","synonyms":[{"name":"down regulation of cell fate determination","type":"exact"},{"name":"down-regulation of cell fate determination","type":"exact"},{"name":"downregulation of cell fate determination","type":"exact"},{"name":"inhibition of cell fate determination","type":"narrow"}],"termid":"GO:1905934"}


id: GO:1990889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone H4 in which the lysine residue at position 20 has been modified by trimethylation.","definition_xrefs":["PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"H4K20me3 modified histone binding","termid":"GO:1990889"}


id: GO:0052497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within the xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of xylem in other organism involved in symbiotic interaction (obsolete GO:0052497)","synonyms":[{"name":"occlusion by organism of xylem in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052497"}


id: PBO:0079851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog A","termid":"PBO:0079851"}


id: PBO:0013809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase Erg27 (predicted)","termid":"PBO:0013809"}


id: FYPO:0003222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to zearalenone. Cells stop growing (and may die) at a concentration of zearalenone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to zearalenone","synonyms":[{"name":"hypersensitive to zearalenone","type":"exact"},{"name":"sensitive to ZEA","type":"exact"},{"name":"sensitive to zearalenone during mitotic cell cycle","type":"related"},{"name":"sensitive to zearalenone during vegetative growth","type":"exact"}],"termid":"FYPO:0003222"}


id: SO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the intron of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_intronic_variant","synonyms":[{"name":"incomplete transcript intronic variant","type":"exact"}],"termid":"SO:0002078"}


id: PBO:0035750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_secondary_cell_septum_thickness","termid":"PBO:0035750"}


id: GO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"chloroplast targeting sequence binding","termid":"GO:0030941"}


id: MOD:02049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-isoleucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-isoleucine residue","synonyms":[{"name":"XlnkIle","type":"exact"}],"termid":"MOD:02049"}


id: PBO:0078119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-1","termid":"PBO:0078119"}


id: GO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein (obsolete GO:0003675)","synonyms":[{"name":"protein","type":"exact"}],"termid":"GO:0003675"}


id: PBO:0046113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1","termid":"PBO:0046113"}


id: PBO:0058590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-1","termid":"PBO:0058590"}


id: GO:0062243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory outer membrane","synonyms":[{"name":"outer membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062243"}


id: PBO:0086876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative targeting subunit for type-1 protein phosphatase Glc7p; tethers Glc7p to Gsy2p glycogen synthase; PIG1 has a paralog, GAC1, that arose from the whole genome duplication","termid":"PBO:0086876"}


id: PBO:0034629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_with_centromeres_dissociated_from_spindle_pole_body","termid":"PBO:0034629"}


id: PBO:0004059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Ucp3 (predicted)","termid":"PBO:0004059"}


id: GO:1904224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucuronosyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:20610558","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of glucuronosyltransferase activity","termid":"GO:1904223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucuronosyltransferase activity","synonyms":[{"name":"down regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"down regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"down regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"down regulation of GT activity","type":"exact"},{"name":"down regulation of PNP-UDPGT","type":"related"},{"name":"down regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"down regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"down regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"down regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"down regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"down regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"down regulation of UDPGA transferase activity","type":"exact"},{"name":"down regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"down regulation of UDPGT activity","type":"exact"},{"name":"down regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"down regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"down regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"down regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of glucuronosyltransferase activity","type":"exact"},{"name":"down regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"down regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of pnp-UDPGT activity","type":"narrow"},{"name":"down regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"down regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"down regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"down regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"down regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"},{"name":"down-regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"down-regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"down-regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"down-regulation of GT activity","type":"exact"},{"name":"down-regulation of PNP-UDPGT","type":"related"},{"name":"down-regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"down-regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"down-regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"down-regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"down-regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"down-regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"down-regulation of UDPGA transferase activity","type":"exact"},{"name":"down-regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"down-regulation of UDPGT activity","type":"exact"},{"name":"down-regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"down-regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"down-regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of glucuronosyltransferase activity","type":"exact"},{"name":"down-regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"down-regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of pnp-UDPGT activity","type":"narrow"},{"name":"down-regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"down-regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"down-regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"down-regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"down-regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"},{"name":"downregulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"downregulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"downregulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"downregulation of GT activity","type":"exact"},{"name":"downregulation of PNP-UDPGT","type":"related"},{"name":"downregulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"downregulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"downregulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"downregulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"downregulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"downregulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"downregulation of UDPGA transferase activity","type":"exact"},{"name":"downregulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"downregulation of UDPGT activity","type":"exact"},{"name":"downregulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"downregulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of bilirubin UDPGT activity","type":"narrow"},{"name":"downregulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"downregulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of glucuronosyltransferase activity","type":"exact"},{"name":"downregulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"downregulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of pnp-UDPGT activity","type":"narrow"},{"name":"downregulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"downregulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"downregulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"downregulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"downregulation of uridine diphosphoglucuronyltransferase activity","type":"exact"},{"name":"inhibition of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"inhibition of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"inhibition of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"inhibition of GT activity","type":"narrow"},{"name":"inhibition of PNP-UDPGT","type":"related"},{"name":"inhibition of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of UDP glucuronic acid transferase activity","type":"narrow"},{"name":"inhibition of UDP glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of UDP glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"narrow"},{"name":"inhibition of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of UDP-glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of UDPGA transferase activity","type":"narrow"},{"name":"inhibition of UDPGA-glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of UDPGT activity","type":"narrow"},{"name":"inhibition of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"inhibition of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of bilirubin UDPGT activity","type":"narrow"},{"name":"inhibition of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"inhibition of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of morphine glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of pnp-UDPGT activity","type":"narrow"},{"name":"inhibition of uridine 5'-diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphate glucuronyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronosyltransferase activity","type":"narrow"},{"name":"inhibition of uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"negative regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"negative regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"negative regulation of GT activity","type":"exact"},{"name":"negative regulation of PNP-UDPGT","type":"related"},{"name":"negative regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"negative regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"negative regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"negative regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"negative regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"negative regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"negative regulation of UDPGA transferase activity","type":"exact"},{"name":"negative regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"negative regulation of UDPGT activity","type":"exact"},{"name":"negative regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"negative regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"negative regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"negative regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of pnp-UDPGT activity","type":"narrow"},{"name":"negative regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"negative regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"negative regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"negative regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"negative regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"}],"termid":"GO:1904224"}


id: PBO:0082682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome","termid":"PBO:0082682"}


id: PBO:0073567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shiftless antiviral inhibitor of ribosomal frameshifting","termid":"PBO:0073567"}


id: PBO:0062742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 1","termid":"PBO:0062742"}


id: PBO:0087199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharopine dehydrogenase (NAD+, L-lysine-forming); catalyzes the conversion of saccharopine to L-lysine, which is the final step in the lysine biosynthesis pathway; also has mRNA binding activity","termid":"PBO:0087199"}


id: FYPO:0000838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nucleus during vegetative growth","synonyms":[{"name":"normal protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000838"}


id: PBO:0054226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1608","termid":"PBO:0054226"}


id: GO:0052224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis in other organism involved in symbiotic interaction (obsolete GO:0052224)","synonyms":[{"name":"energy taxis in other organism during symbiotic interaction","type":"related"},{"name":"energy taxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052224"}


id: PBO:0087517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved ssDNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; promotes recruitment, helicase and nuclease activities of Dna2p; role in DNA catenation/decatenation pathway of chromosome disentangling; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087517"}


