# terms

id: GO:1900446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of tRNA transcription from RNA polymerase III promoter.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of tRNA transcription from RNA polymerase III promoter (obsolete GO:1900446)","synonyms":[{"name":"down regulation of tRNA transcription from Pol III promoter","type":"exact"},{"name":"down regulation of tRNA transcription from RNA polymerase III promoter","type":"exact"},{"name":"down-regulation of tRNA transcription from Pol III promoter","type":"exact"},{"name":"down-regulation of tRNA transcription from RNA polymerase III promoter","type":"exact"},{"name":"downregulation of tRNA transcription from Pol III promoter","type":"exact"},{"name":"downregulation of tRNA transcription from RNA polymerase III promoter","type":"exact"},{"name":"inhibition of tRNA transcription from Pol III promoter","type":"exact"},{"name":"inhibition of tRNA transcription from RNA polymerase III promoter","type":"narrow"},{"name":"negative regulation of tRNA transcription from Pol III promoter","type":"exact"}],"termid":"GO:1900446"}


id: PR:Q10270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoadenosine phosphosulfate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00955","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.06","secondary_identifiers":["UniProtKB:Q10270"],"synonyms":[{"name":"3'-phosphoadenylylsulfate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAPS reductase, thioredoxin dependent (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAdoPS reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cysH","type":"exact"}],"termid":"PR:Q10270"}


id: PBO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4 (predicted)","termid":"PBO:0003327"}


id: FYPO:0003072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of primary amine oxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal primary amine oxidase activity","synonyms":[{"name":"decreased copper amine oxidase activity","type":"narrow"}],"termid":"FYPO:0003072"}


id: PBO:0027239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_streptothricin","termid":"PBO:0027239"}


id: PBO:0003976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol metabolism protein Opi10 (predicted)","termid":"PBO:0003976"}


id: GO:0019261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-dichlorobenzene metabolic process","termid":"GO:0018912"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"1,4-dichlorobenzene catabolic process","secondary_identifiers":["MetaCyc:14DICHLORBENZDEG-PWY"],"synonyms":[{"name":"1,4-dichlorobenzene breakdown","type":"exact"},{"name":"1,4-dichlorobenzene catabolism","type":"exact"},{"name":"1,4-dichlorobenzene degradation","type":"exact"}],"termid":"GO:0019261"}


id: PBO:0031307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_during_vegetative_growth","termid":"PBO:0031307"}


id: GO:0051946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of L-glutamate reuptake","type":"exact"},{"name":"regulation of L-glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of glutamate reuptake","type":"exact"},{"name":"regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of glutamate uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051946"}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["GOC:vw","PMID:11283612","PMID:15147268","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: PBO:0069989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1284, pseudogene","termid":"PBO:0069989"}


id: PBO:0041361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 binding protein beta","termid":"PBO:0041361"}


id: PBO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATRIP, ATR checkpoint kinase regulatory subunit Rad26","termid":"PBO:0002522"}


id: PBO:0077191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia homeobox 2","termid":"PBO:0077191"}


id: PBO:0046975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B2","termid":"PBO:0046975"}


id: GO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BRE RNA element (Bruno response element).","definition_xrefs":["PMID:10893231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"BRE binding","termid":"GO:0042835"}


id: GO:0043944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"}


id: SO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that leads to the change of an amino acid within the protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_synonymous","synonyms":[{"name":"non synonymous","type":"related"}],"termid":"SO:0001816"}


id: PBO:0071678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 10","termid":"PBO:0071678"}


id: PBO:0090583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated ATP-dependent RNA helicase Prp28","termid":"PBO:0090583"}


id: GO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel.","definition_xrefs":["GOC:mah","PMID:16931858","PMID:21196346","GOC:BHF","GOC:sl","PMID:10206335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"amelogenesis","termid":"GO:0097186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enamel mineralization","synonyms":[{"name":"enamel formation","type":"related"}],"termid":"GO:0070166"}


id: PBO:0049368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2B","termid":"PBO:0049368"}


id: GO:1900936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of nonadec-1-ene metabolic process","termid":"GO:1900933"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of nonadec-1-ene formation","type":"exact"},{"name":"down regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene formation","type":"exact"},{"name":"down-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of nonadec-1-ene formation","type":"exact"},{"name":"downregulation of nonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene formation","type":"exact"},{"name":"inhibition of nonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene formation","type":"exact"},{"name":"negative regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900936"}


id: FYPO:0001596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which amino acid import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal amino acid import","synonyms":[{"name":"normal amino acid uptake","type":"exact"},{"name":"normal amino acid import across plasma membrane","type":"exact"},{"name":"normal amino acid import during mitotic cell cycle","type":"related"},{"name":"normal amino acid import during vegetative growth","type":"exact"},{"name":"normal amino acid import into cell","type":"exact"}],"termid":"FYPO:0001596"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: GO:0042785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating host cytokine networks, e.g. by secreting proteins that mimic cytokine receptors that act to sequester host cytokines and inhibit action. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:9600978","PMID:9275219","PMID:10620615"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion of host immune response via modulation of host cytokine network (obsolete GO:0042785)","synonyms":[{"name":"active evasion of host immune response via regulation of host cytokine network","type":"related"},{"name":"active evasion of immune response of other organism via regulation of cytokine network of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of host cytokine network","type":"exact"},{"name":"active immune evasion via regulation of host cytokine network","type":"exact"},{"name":"evasion of host immune response via regulation of host cytokine network","type":"exact"}],"termid":"GO:0042785"}


id: PBO:0036173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036173"}


id: GO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell aging (obsolete GO:0090343)","termid":"GO:0090343"}


id: PBO:0051804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain ArfGEF 3","termid":"PBO:0051804"}


id: FYPO:0002122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sodium:hydrogen antiporter activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transporter activity","termid":"FYPO:0002118"},{"relation_name":"is_a","term_name":"abnormal sodium:hydrogen antiporter activity","termid":"FYPO:0002121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0000707","FYPO:0000652","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased sodium:hydrogen antiporter activity","synonyms":[{"name":"reduced sodium:hydrogen antiporter activity","type":"exact"}],"termid":"FYPO:0002122"}


id: GO:0046027
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108259],"is_not":false,"summary":null,"term":"GO:0046027"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol.","definition_xrefs":["EC:2.3.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.3.1.158-RXN","RHEA:14057"],"synonyms":[{"name":"PDAT activity","type":"related"},{"name":"phospholipid:1,2-diacyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0046027","terms_by_termid":{"GO:0046027":null}}


id: GO:0005951
data:
  {"annotated_genes":["SJAG_00412","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102695,107267],"is_not":false,"summary":null,"term":"GO:0005951"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.","definition_xrefs":["PMID:8626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine-specific carbamoyl phosphate synthetase complex","type":"narrow"},{"name":"carbamoyl phosphate synthase complex","type":"exact"},{"name":"carbamoyl-phosphate synthase arginine-specific complex","type":"narrow"}],"termid":"GO:0005951","terms_by_termid":{"GO:0005951":null}}


id: GO:0034244
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114077],"is_not":false,"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090041"],"synonyms":[{"name":"negative regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034244","terms_by_termid":{"GO:0034244":null}}


id: PBO:0028826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-twin_haploid_meiosis","termid":"PBO:0028826"}


id: FYPO:0001303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal myristoyl-CoA ligase activity","synonyms":[{"name":"abnormal myristoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001303"}


id: GO:0019773
data:
  {"annotated_genes":["SJAG_04357","SJAG_02502","SJAG_02562","SJAG_00808","SJAG_00778","SJAG_05316","SJAG_04306"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84759,92661,95927,98069,107586,110824,111742],"is_not":false,"summary":null,"term":"GO:0019773"}]},"cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","PMID:10854779","GOC:jl","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proteasome core complex","termid":"GO:0005839"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00778":null,"SJAG_00808":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome core complex, alpha-subunit complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019773","terms_by_termid":{"GO:0019773":null}}


id: PATO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular","termid":"PATO:0002125"}


id: PBO:0003856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa2","termid":"PBO:0003856"}


id: PBO:0063830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD and ring finger domains 1","termid":"PBO:0063830"}


id: GO:0052696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a flavonoid by the conjugation of glucuronic acid. The resultant flavonoid glucuronosides are often much more water-soluble than the precursor.","definition_xrefs":["GOC:BHF","PMID:20056724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"flavonoid glucuronidation","synonyms":[{"name":"flavonoid glucuronide biosynthesis","type":"exact"},{"name":"flavonoid glucuronide biosynthetic process","type":"exact"},{"name":"flavonoid glucuronoside biosynthesis","type":"exact"},{"name":"flavonoid glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:0052696"}


id: GO:1901780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentalenolactone.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:17178094","MetaCyc:PWY-6915","UniPathway:UPA00974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone biosynthetic process","synonyms":[{"name":"pentalenolactone anabolism","type":"exact"},{"name":"pentalenolactone biosynthesis","type":"exact"},{"name":"pentalenolactone formation","type":"exact"},{"name":"pentalenolactone synthesis","type":"exact"}],"termid":"GO:1901780"}


id: PBO:0048120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 1 (H blood group)","termid":"PBO:0048120"}


id: PBO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19/Rox3","termid":"PBO:0005613"}


id: GO:1905833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microtubule nucleation.","definition_xrefs":["GO_REF:0000058","PMID:27689799","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule nucleation","termid":"GO:0010968"},{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization","termid":"GO:0031115"},{"relation_name":"negatively_regulates","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0008150","GO:0007010","GO:0065003"],"is_obsolete":false,"name":"negative regulation of microtubule nucleation","synonyms":[{"name":"down regulation of microtubule nucleation","type":"exact"},{"name":"down-regulation of microtubule nucleation","type":"exact"},{"name":"downregulation of microtubule nucleation","type":"exact"},{"name":"inhibition of microtubule nucleation","type":"narrow"}],"termid":"GO:1905833"}


id: PBO:0072632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich coiled-coil 2","termid":"PBO:0072632"}


id: PR:Q9P6I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cha4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1683.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.13c","synonyms":[{"name":"Spom972h-cha4","type":"exact"}],"termid":"PR:Q9P6I9"}


id: GO:0021843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of tangentially migrating interneurons that are not guided by attaching to extracellular substrates.","definition_xrefs":["PMID:12626695","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}


id: PBO:0070906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 14","termid":"PBO:0070906"}


id: SO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a protein sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_match","synonyms":[{"name":"protein match","type":"exact"}],"termid":"SO:0000349"}


id: GO:0003896
data:
  {"annotated_genes":["SJAG_04994","SJAG_02627","SJAG_00399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95601,99145,101511],"is_not":false,"summary":null,"term":"GO:0003896"}]},"cv_name":"molecular_function","definition":"Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.","definition_xrefs":["GOC:mcc","PMID:11395402","PMID:38492718","PMID:26184436","PMID:38203225","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00399":null,"SJAG_02627":null,"SJAG_04994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"DNA primase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003897","GO:0003898"],"termid":"GO:0003896","terms_by_termid":{"GO:0003896":null}}


id: PBO:0064996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 4","termid":"PBO:0064996"}


id: PBO:0043779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A5","termid":"PBO:0043779"}


id: PBO:0039426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 6","termid":"PBO:0039426"}


id: PBO:0057999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3923","termid":"PBO:0057999"}


id: GO:2000380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm development","termid":"GO:2000380"}


id: GO:0090160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to lysosomes.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to vacuole transport","termid":"GO:0006896"},{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Golgi to lysosome transport","termid":"GO:0090160"}


id: PBO:0070366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 4","termid":"PBO:0070366"}


id: PBO:0046088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 13","termid":"PBO:0046088"}


id: PBO:0036347
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEUcine requiring","termid":"PBO:0036347"}


id: PBO:0041406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 132","termid":"PBO:0041406"}


id: PBO:0059172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 3","termid":"PBO:0059172"}


id: PBO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine","termid":"PBO:0003703"}


id: GO:1900420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular alcohol catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of cellular alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"negatively_regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of cellular alcohol catabolic process","synonyms":[{"name":"down regulation of cellular alcohol catabolic process","type":"exact"},{"name":"down-regulation of cellular alcohol catabolic process","type":"exact"},{"name":"downregulation of cellular alcohol catabolic process","type":"exact"},{"name":"inhibition of cellular alcohol catabolic process","type":"narrow"}],"termid":"GO:1900420"}


id: GO:0048383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesectoderm over time, from its formation to the mature structure. In animal embryos, mesectoderm development processes give rise to both mesoderm and ectoderm tissues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesectoderm development","termid":"GO:0048383"}


id: PBO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resistance_to_chemical_during_vegetative_growth","termid":"PBO:0031304"}


id: PBO:0061106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family CARD domain containing 4","termid":"PBO:0061106"}


id: PBO:0017061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, ASAP domain protein","termid":"PBO:0017061"}


id: PBO:0011068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted)","termid":"PBO:0011068"}


id: PBO:0060829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN3 antisense RNA 1","termid":"PBO:0060829"}


id: GO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of the polar nuclei, the two nuclei contained within the same cell that are created from the mitotic division of the megaspore during angiosperm reproduction. Polar nuclear fusion takes place in the ovule, forming in the fusion nucleus and giving rise to the endosperm when fertilized.","definition_xrefs":["GOC:mtg_plant","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polar nucleus fusion","termid":"GO:0010197"}


id: PBO:0030903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030903"}


id: PBO:0073549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHANK2 antisense RNA 1","termid":"PBO:0073549"}


id: PBO:0088388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC), ubiquitin conjugating enzyme E2 subunit Rhp6/Rad6","termid":"PBO:0088388"}


id: PBO:0091966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb5","termid":"PBO:0091966"}


id: PBO:0029341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nickel","termid":"PBO:0029341"}


id: GO:0015747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of urate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"urate transport","synonyms":[{"name":"urate transmembrane transport","type":"exact"},{"name":"uric acid transport","type":"exact"}],"termid":"GO:0015747"}


id: GO:0010849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of ATP hydrolysis by an ATPase. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of proton-transporting ATPase activity, rotational mechanism","synonyms":[{"name":"regulation of V-type ATPase activity","type":"broad"},{"name":"regulation of hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"}],"termid":"GO:0010849"}


id: PBO:0039394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 3","termid":"PBO:0039394"}


id: PBO:0027019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nalidixic_acid","termid":"PBO:0027019"}


id: PBO:0027580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multiseptate_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027580"}


id: GO:0061098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein tyrosine kinase activity","termid":"GO:0061098"}


id: PBO:0065759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin and HIN domain family member 5, pseudogene","termid":"PBO:0065759"}


id: SO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_part","synonyms":[{"name":"chromosomal region","type":"exact"},{"name":"chromosomal_region","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"SO:0000830"}


id: PBO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member O, pseudogene","termid":"PBO:0043286"}


id: GO:0003677
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id: PBO:0050714
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id: PBO:0028484
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity","termid":"PBO:0028484"}


id: GO:0000768
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:tb","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation","termid":"GO:0006949"},{"relation_name":"is_a","term_name":"cell-cell fusion","termid":"GO:0140253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytium formation by plasma membrane fusion","synonyms":[{"name":"cell fusion","type":"broad"}],"termid":"GO:0000768"}


id: PR:O14077
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-degrading enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF64","PRO:DNx","OMA:SCHPO01213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc protease mug138 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.12c","secondary_identifiers":["UniProtKB:O14077"],"synonyms":[{"name":"Spom972h-IDE","type":"exact"},{"name":"meiotically up-regulated gene 138 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14077"}


id: GO:0047289
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + CMP-N-acetyl-beta-neuraminate = 1,2-diacyl-3-[3-(alpha-D-N-acetylneuraminyl)-beta-D-galactosyl]-sn-glycerol + CMP + H+.","definition_xrefs":["EC:2.4.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"galactosyldiacylglycerol alpha-2,3-sialyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03468","MetaCyc:2.4.99.5-RXN","RHEA:11664"],"termid":"GO:0047289"}


id: GO:1900909
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"negatively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of olefin metabolic process","synonyms":[{"name":"down regulation of olefin metabolic process","type":"exact"},{"name":"down regulation of olefin metabolism","type":"related"},{"name":"down-regulation of olefin metabolic process","type":"exact"},{"name":"down-regulation of olefin metabolism","type":"related"},{"name":"downregulation of olefin metabolic process","type":"exact"},{"name":"downregulation of olefin metabolism","type":"related"},{"name":"inhibition of olefin metabolic process","type":"narrow"},{"name":"inhibition of olefin metabolism","type":"related"},{"name":"negative regulation of olefin metabolism","type":"related"}],"termid":"GO:1900909"}


id: PBO:0041355
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4B (Chido blood group), copy 2","termid":"PBO:0041355"}


id: GO:0006931
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of adhesions that stabilize protrusions at the leading edge of a migrating cell; involves integrin activation, clustering, and the recruitment of structural and signaling components to nascent adhesions.","definition_xrefs":["PMID:14657486","ISBN:0815316194","PMID:11944043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:0006931"}


id: PBO:0000560
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap111 (predicted)","termid":"PBO:0000560"}


id: FYPO:0002599
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is abnormal. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"abnormal histone H2A phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002599"}


id: PR:O74941
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome biogenesis factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23077:SF12","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ATPase pex1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.03","secondary_identifiers":["UniProtKB:O74941"],"synonyms":[{"name":"SPCC553.03","type":"related"},{"name":"Spom972h-PEX1","type":"exact"},{"name":"peroxin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome biogenesis protein pex1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74941"}


id: GO:0018807
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity","secondary_identifiers":["RHEA:39651","EC:3.7.1.21"],"termid":"GO:0018807"}


id: PBO:0067554
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 705, pseudogene","termid":"PBO:0067554"}


id: GO:0048097
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism, at the level of transcription or post-transcription, maintaining gene activation in the long-term.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete long-term maintenance of gene activation (obsolete GO:0048097)","termid":"GO:0048097"}


id: SO:0000085
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  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000085 gene_by_genome_location (obsolete SO:0000085)","termid":"SO:0000085"}


id: GO:0072639
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-33 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-33 production","secondary_identifiers":["GO:0150126","GO:0072640"],"synonyms":[{"name":"C9orf26 production","type":"narrow"},{"name":"IL-33 production","type":"exact"},{"name":"IL1F11 production","type":"narrow"},{"name":"IL33 production","type":"exact"},{"name":"NF-HEV production","type":"exact"},{"name":"interleukin-33 biosynthetic process","type":"narrow"},{"name":"interleukin-33 secretion","type":"narrow"}],"termid":"GO:0072639"}


id: SO:0001063
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An immature_peptide_region is the extent of the peptide after it has been translated and before any processing occurs.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"immature_peptide_region","secondary_identifiers":["BS:00129"],"synonyms":[{"name":"immature peptide region","type":"exact"}],"termid":"SO:0001063"}


id: PBO:0029394
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id: PBO:0085962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses Ca2+ sensitivity of mutants lacking inositol phosphorylceramide mannosyltransferases Csg1p and Csh1p; transcription is induced under hyperosmotic stress and repressed by alpha factor; HOR7 has a paralog, DDR2, that arose from the whole genome duplication","termid":"PBO:0085962"}


id: PR:O74945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Tu GTP-binding domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04255","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.08c","secondary_identifiers":["UniProtKB:O74945"],"synonyms":[{"name":"EF-2 like GTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD1","type":"exact"},{"name":"elongation factor-like 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74945"}


id: GO:1902286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in dendrite guidance.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","termid":"GO:1902285"},{"relation_name":"part_of","term_name":"dendrite guidance","termid":"GO:0070983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in dendrite guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in dendritic guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendrite guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendritic guidance","type":"exact"}],"termid":"GO:1902286"}


id: PBO:0056090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g1","termid":"PBO:0056090"}


id: GO:1903555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["GOC:TermGenie","PMID:24187568","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"regulation of TNF superfamily production","type":"related"},{"name":"regulation of TNFSF cytokine production","type":"exact"}],"termid":"GO:1903555"}


id: PBO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A7","termid":"PBO:0046423"}


id: PR:O14258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ace2 gene.","definition_xrefs":["UniProtKB:O14258","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein expression activator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.12c","synonyms":[{"name":"Spom972h-ace2","type":"exact"}],"termid":"PR:O14258"}


id: GO:0016187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Internalization of the contents of a synaptic vesicle into the postsynaptic membrane following endocytosis.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle internalization (obsolete GO:0016187)","synonyms":[{"name":"synaptic vesicle internalization","type":"exact"}],"termid":"GO:0016187"}


id: PBO:0079614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 J2","termid":"PBO:0079614"}


id: PBO:0063476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 4","termid":"PBO:0063476"}


id: PBO:0026653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_plasma_membrane_at_cell_division_site_during_vegetative_growth","termid":"PBO:0026653"}


id: GO:0030943
data:
  {"annotated_genes":["SJAG_04996","SJAG_03358","SJAG_01640"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95614,95721,103484],"is_not":false,"summary":null,"term":"GO:0030943"}]},"cv_name":"molecular_function","definition":"Binding to a mitochondrion targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01640":null,"SJAG_03358":null,"SJAG_04996":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"mitochondrion targeting sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial targeting sequence binding","type":"exact"}],"termid":"GO:0030943","terms_by_termid":{"GO:0030943":null}}


id: GO:0045614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of plasmatocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"is_a","term_name":"regulation of plasmatocyte differentiation","termid":"GO:0045613"},{"relation_name":"negatively_regulates","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasmatocyte differentiation","synonyms":[{"name":"down regulation of plasmatocyte differentiation","type":"exact"},{"name":"down-regulation of plasmatocyte differentiation","type":"exact"},{"name":"downregulation of plasmatocyte differentiation","type":"exact"},{"name":"inhibition of plasmatocyte differentiation","type":"narrow"}],"termid":"GO:0045614"}


id: PBO:0064301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 4","termid":"PBO:0064301"}


id: PBO:0062738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 5","termid":"PBO:0062738"}


id: PBO:0085757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in negative regulation of PolIII transcription; effector kinase of the TOR signaling pathway and phosphorylates Rpc53p to regulate ribosome and tRNA biosynthesis; member of the LAMMER family of protein kinases, which are serine/threonine kinases also capable of phosphorylating tyrosine residues; capable of autophosphorylation","termid":"PBO:0085757"}


id: PBO:0065246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 18","termid":"PBO:0065246"}


id: GO:0016847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H+.","definition_xrefs":["RHEA:21744","EC:4.4.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase activity","secondary_identifiers":["MetaCyc:4.4.1.14-RXN","GO:0034100","KEGG_REACTION:R00179"],"synonyms":[{"name":"1-aminocyclopropane-1-carboxylate synthetase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylic acid synthase activity","type":"related"},{"name":"1-aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"ACC synthase activity","type":"related"},{"name":"L-VG deaminase activity","type":"related"},{"name":"L-vinylglycine deaminase activity","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase (1-aminocyclopropane-1-carboxylate-forming)","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase activity","type":"related"},{"name":"aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"aminocyclopropanecarboxylic acid synthase activity","type":"related"}],"termid":"GO:0016847"}


id: PBO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr3","termid":"PBO:0000640"}


id: PR:Q9HGM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ homolog subfamily C member 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.02c","secondary_identifiers":["UniProtKB:Q9HGM9"],"synonyms":[{"name":"Spom972h-DNAJC7","type":"exact"}],"termid":"PR:Q9HGM9"}


id: PBO:0080023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 9, pseudogene","termid":"PBO:0080023"}


id: GO:0005736
data:
  {"annotated_genes":["SJAG_03468","SJAG_02070","SJAG_03578","SJAG_01562","SJAG_04261","SJAG_01313","SJAG_00731","SJAG_03956","SJAG_01444","SJAG_01698","SJAG_02871","SJAG_03144","SJAG_01765","SJAG_01128","SJAG_04106","SJAG_01948","SJAG_02101","SJAG_02653"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83929,83930,85780,86605,88229,90107,91945,98718,98862,99523,101058,101966,105979,106879,109335,109707,109708,109992,110400,111693],"is_not":false,"summary":null,"term":"GO:0005736"}]},"cv_name":"cellular_component","definition":"RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005730","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase I complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase I activity","type":"related"},{"name":"DNA-directed RNA polymerase I complex","type":"exact"}],"termid":"GO:0005736","terms_by_termid":{"GO:0005736":null}}


id: GO:0098562
data:
  {"annotated_genes":["SJAG_01738","SJAG_04077","SJAG_02989","SJAG_02233","SJAG_02444","SJAG_03464","SJAG_00368","SJAG_02196","SJAG_04666","SJAG_04583","SJAG_01114","SJAG_05207","SJAG_00605","SJAG_05268","SJAG_02392","SJAG_04732","SJAG_04266","SJAG_03596","SJAG_03081","SJAG_00948","SJAG_02605","SJAG_04018","SJAG_01774","SJAG_03345","SJAG_02102","SJAG_01134","SJAG_04509","SJAG_01242","SJAG_01307","SJAG_02587","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102013,91279,90101,90911,106046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[100996,95440,102770,85485,96700,111940,100642,98686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[84134,107057,102771,103224,98603,84202,99913,85954,88781,88615,95161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[92043,102772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[106735],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[102672,90423,105208,110023,103318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The side of a membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00948":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02102":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04266":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04732":null,"SJAG_05207":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098562","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098554":null,"GO:0106186":null}}


id: PATO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001108 relative amplitude value (obsolete PATO:0001108)","termid":"PATO:0001108"}


id: GO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foregut region specified to become the pancreas forms a bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"branching involved in pancreas morphogenesis","termid":"GO:0061114"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic bud formation","termid":"GO:0061130"}


id: RO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_host","termid":"RO:0002454"}


id: GO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane biosynthetic process","synonyms":[{"name":"alkane anabolism","type":"exact"},{"name":"alkane biosynthesis","type":"exact"},{"name":"alkane formation","type":"exact"},{"name":"alkane synthesis","type":"exact"}],"termid":"GO:0043447"}


id: PBO:0067785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 87","termid":"PBO:0067785"}


id: PBO:0075740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP54 antisense RNA 1","termid":"PBO:0075740"}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: PBO:0058172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4467","termid":"PBO:0058172"}


id: PBO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A","termid":"PBO:0046042"}


id: PBO:0075514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 3","termid":"PBO:0075514"}


id: PBO:0056101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6","termid":"PBO:0056101"}


id: GO:0097007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (EE)-geranyllinalool + NADPH + O2 = 4,8,12-trimethyl-1,3,7,11-tridecatetraene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C18-farnesylacetone and then cleaved to produce 4,8,12-trimethyl-1,3,7,11-tridecatetraene (TMTT) and acetone.","definition_xrefs":["PMID:21088219","MetaCyc:RXN-8620","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity","secondary_identifiers":["RHEA:13545"],"synonyms":[{"name":"4,8,12-trimethyl-1,3,7,11-tridecatetraene synthase activity","type":"exact"},{"name":"TMTT synthase activity","type":"exact"}],"termid":"GO:0097007"}


id: PBO:0067381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 483, pseudogene","termid":"PBO:0067381"}


id: GO:1990929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydrolysis of terminal non-reducing alpha-sulfoquinovoside residues in alpha-sulfoquinovosyl diacylglycerides and alpha-sulfoquinovosyl glycerol, generating alpha-sulfoquinovose.","definition_xrefs":["GOC:imk","PMID:26878550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on glycosyl bonds","termid":"GO:0016798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"sulfoquinovosidase activity","termid":"GO:1990929"}


id: PBO:0005673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase (predicted)","termid":"PBO:0005673"}


id: GO:0004643
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115117],"is_not":false,"summary":null,"term":"GO:0004643"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide.","definition_xrefs":["EC:2.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"phosphoribosylaminoimidazolecarboxamide formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22192","MetaCyc:AICARTRANSFORM-RXN","Reactome:R-HSA-73798"],"synonyms":[{"name":"10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazole-carboxamide N-formyltransferase activity","type":"related"},{"name":"10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity","type":"related"},{"name":"5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity","type":"related"},{"name":"5-amino-1-ribosyl-4-imidazolecarboxamide 5'-phosphate transformylase activity","type":"related"},{"name":"5-amino-4-imidazolecarboxamide ribonucleotide transformylase activity","type":"related"},{"name":"5-amino-4-imidazolecarboxamide ribotide transformylase activity","type":"related"},{"name":"AICAR formyltransferase activity","type":"related"},{"name":"AICAR transformylase activity","type":"related"},{"name":"aminoimidazolecarboxamide ribonucleotide transformylase activity","type":"related"}],"termid":"GO:0004643","terms_by_termid":{"GO:0004643":null}}


id: PATO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000917 relative thickness (obsolete PATO:0000917)","termid":"PATO:0000917"}


id: PBO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.2","termid":"PBO:0001085"}


id: PBO:0003783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type zinc finger protein","termid":"PBO:0003783"}


id: PBO:0077822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3","termid":"PBO:0077822"}


id: PBO:0002940
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.76","termid":"PBO:0002940"}


id: PBO:0030900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_stress_during_vegetative_growth","termid":"PBO:0030900"}


id: PBO:0054393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1789","termid":"PBO:0054393"}


id: PBO:0087398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress inducible cytoplasmic thioredoxin peroxidase; cooperates with Tsa1p in the removal of reactive oxygen, nitrogen and sulfur species using thioredoxin as hydrogen donor; deletion enhances the mutator phenotype of tsa1 mutants; protein abundance increases in response to DNA replication stress; TSA2 has a paralog, TSA1, that arose from the whole genome duplication","termid":"PBO:0087398"}


id: PBO:0077200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 18","termid":"PBO:0077200"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104492],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: PBO:0013463
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in rad3delta or rad3-36 mutant","termid":"PBO:0013463"}


id: FYPO:0003507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on zinc","synonyms":[{"name":"normal cell population growth in presence of zinc","type":"exact"},{"name":"normal cell population growth on zinc","type":"exact"},{"name":"normal cell population growth on zinc ion","type":"exact"},{"name":"normal cellular response to zinc","type":"related"},{"name":"normal growth on zinc ions","type":"exact"},{"name":"normal vegetative cell population growth on zinc","type":"exact"}],"termid":"FYPO:0003507"}


id: PBO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin glycosyltransferase 1","termid":"PBO:0046773"}


id: PBO:0075427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPAG16 divergent transcript","termid":"PBO:0075427"}


id: PBO:0003661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/EH/EF hand domain protein Ucp8","termid":"PBO:0003661"}


id: PBO:0075165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D1 polypeptide","termid":"PBO:0075165"}


id: PBO:0028462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_lemon-shaped_cell","termid":"PBO:0028462"}


id: PBO:0077112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 21","termid":"PBO:0077112"}


id: PBO:0059935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 21","termid":"PBO:0059935"}


id: GO:0160008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[protein] = (2E)-2-butenoate + L-lysyl-[protein].","definition_xrefs":["PMID:28497810","PMID:34608293","PMID:30279482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"protein decrotonylase activity","secondary_identifiers":["RHEA:69172"],"termid":"GO:0160008"}


id: PBO:0066950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 252","termid":"PBO:0066950"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["PMID:21666597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: GO:1905053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of base-excision repair.","definition_xrefs":["GOC:ah","GO_REF:0000058","PMID:18973764","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of base-excision repair","termid":"GO:1905051"},{"relation_name":"positively_regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"positive regulation of base-excision repair","synonyms":[{"name":"upregulation of BER","type":"exact"},{"name":"activation of BER","type":"narrow"},{"name":"activation of base-excision repair","type":"narrow"},{"name":"positive regulation of BER","type":"exact"},{"name":"up regulation of BER","type":"exact"},{"name":"up regulation of base-excision repair","type":"exact"},{"name":"up-regulation of BER","type":"exact"},{"name":"up-regulation of base-excision repair","type":"exact"},{"name":"upregulation of base-excision repair","type":"exact"}],"termid":"GO:1905053"}


id: PBO:0074174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 1","termid":"PBO:0074174"}


id: GO:1905253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GO_REF:0000060","PMID:23069713","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of epidermal growth factor receptor signaling pathway involved in heart process (obsolete GO:1905253)","synonyms":[{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"}],"termid":"GO:1905253"}


id: PBO:0012841
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perlman syndrome","termid":"PBO:0012841"}


id: FYPO:0004148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxamine-phosphate oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal pyridoxamine-phosphate oxidase activity","termid":"FYPO:0004148"}


id: PBO:0067934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 236","termid":"PBO:0067934"}


id: PBO:0076982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THADA armadillo repeat containing","termid":"PBO:0076982"}


id: FYPO:0004722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of nuclear microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear microtubules","synonyms":[{"name":"normal nuclear microtubule morphology","type":"exact"},{"name":"normal nuclear microtubule structure","type":"narrow"},{"name":"normal nuclear microtubules during mitotic cell cycle","type":"related"},{"name":"normal nuclear microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004722"}


id: GO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of an anatomical structure with reference to an axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of anatomical structure orientation","termid":"GO:0048560"}


id: FYPO:0008092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize para-hydroxy benzoic acid and therefore requires para-hydroxy benzoic acid in the medium for vegetative cell growth.","definition_xrefs":["PMID:37156397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for para-hydroxy benzoic acid","termid":"FYPO:0008092"}


id: GO:0052924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate + 5 isopentenyl diphosphate = 5 diphosphate + all-trans-nonaprenyl diphosphate.","definition_xrefs":["RHEA:27594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity","secondary_identifiers":["EC:2.5.1.85","KEGG_REACTION:R09251","MetaCyc:RXN-11486"],"synonyms":[{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"}],"termid":"GO:0052924"}


id: PBO:0052811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 77","termid":"PBO:0052811"}


id: SO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of known length which may be used to manufacture a longer region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly_component","synonyms":[{"name":"assembly component","type":"exact"}],"termid":"SO:0000143"}


id: PBO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 83","termid":"PBO:0042025"}


id: GO:0004742
data:
  {"annotated_genes":["SJAG_00866","SJAG_02158"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110425,114600],"is_not":false,"summary":null,"term":"GO:0004742"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N6-(S8-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA.","definition_xrefs":["RHEA:17017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_02158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.12","GO:0030523"],"synonyms":[{"name":"acetyl-CoA: enzyme-6-N-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA: enzyme-N6-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:dihydrolipoamide S-acetyltransferase activity","type":"related"},{"name":"dihydrolipoamide S-acetyltransferase activity","type":"exact"},{"name":"dihydrolipoamide S-acyltransferase activity","type":"related"},{"name":"dihydrolipoate acetyltransferase activity","type":"related"},{"name":"dihydrolipoic transacetylase activity","type":"related"},{"name":"dihydrolipoyl acetyltransferase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:acetyl-CoA S-acetyltransferase activity","type":"related"},{"name":"lipoate acetyltransferase activity","type":"related"},{"name":"lipoate transacetylase activity","type":"related"},{"name":"lipoic acetyltransferase activity","type":"related"},{"name":"lipoic acid acetyltransferase activity","type":"related"},{"name":"lipoic transacetylase activity","type":"related"},{"name":"lipoylacetyltransferase activity","type":"related"},{"name":"thioltransacetylase A activity","type":"narrow"},{"name":"transacetylase X activity","type":"narrow"}],"termid":"GO:0004742","terms_by_termid":{"GO:0004742":null}}


id: PR:O42979
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psl1 gene.","definition_xrefs":["UniProtKB:O42979","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHO85 cyclin-like protein psl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.10","synonyms":[{"name":"Spom972h-psl1","type":"exact"}],"termid":"PR:O42979"}


id: PBO:0066119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 12","termid":"PBO:0066119"}


id: FYPO:0002795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles during vegetative growth","termid":"FYPO:0000123"},{"relation_name":"is_a","term_name":"vacuoles present in decreased numbers during vegetative growth","termid":"FYPO:0002793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"large vacuoles present in decreased numbers during vegetative growth","synonyms":[{"name":"enlarged vacuoles present in decreased numbers during vegetative growth","type":"exact"},{"name":"large vacuoles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"large vacuoles present in reduced numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0002795"}


id: PBO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.27.9","termid":"PBO:0004228"}


id: PBO:0025498
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Cdc Eleven","termid":"PBO:0025498"}


id: SO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyl_2_thiouridine","secondary_identifiers":["RNAMOD:059"],"synonyms":[{"name":"5-methyl-2-thiouridine","type":"exact"},{"name":"five methyl 2 thiouridine","type":"exact"},{"name":"m5s2U","type":"exact"}],"termid":"SO:0001351"}


id: PBO:0038607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACBD3 antisense RNA 1","termid":"PBO:0038607"}


id: GO:0032236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel.","definition_xrefs":["PMID:16582901","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via store-operated calcium channel activity (obsolete GO:0032236)","synonyms":[{"name":"activation of calcium ion transport via store-operated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via store-operated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via store-operated calcium channel","type":"exact"},{"name":"positive regulation of store-operated calcium channel activity","type":"exact"},{"name":"stimulation of calcium ion transport via store-operated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via store-operated calcium channel","type":"exact"}],"termid":"GO:0032236"}


id: GO:0052788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the glycosidic bond in an unsaturated saccharide between the unsaturated glucuronyl residue at the nonreducing terminus and the saccharide linked to the residue.","definition_xrefs":["PMID:12729728","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"d-4,5 unsaturated beta-glucuronyl hydrolase activity","synonyms":[{"name":"unsaturated beta-glucuronyl hydrolase activity","type":"exact"}],"termid":"GO:0052788"}


id: PBO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit (predicted)","termid":"PBO:0005230"}


id: PBO:0029310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_butyrate","termid":"PBO:0029310"}


id: MOD:00220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a 4-hydroxy-L-arginine.","definition_xrefs":["PubMed:7650037","RESID:AA0215","PubMed:10966817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-arginine","synonyms":[{"name":"(2S,4Xi)-2-amino-5-[(diaminomethylidene)amino]-4-hydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-4-hydroxypentanoic acid","type":"exact"},{"name":"4-hydroxy-L-arginine","type":"exact"},{"name":"4-hydroxylated L-arginine","type":"exact"},{"name":"4HyArg","type":"exact"},{"name":"C(gamma)-hydroxyarginine","type":"exact"},{"name":"MOD_RES 4-hydroxyarginine","type":"exact"},{"name":"gamma-hydroxyarginine","type":"exact"}],"termid":"MOD:00220"}


id: MOD:01842
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to S-(2-aminovinyl)-L-cysteine.","definition_xrefs":["PubMed:20805503","RESID:AA0548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(R,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-L-cysteine","type":"exact"}],"termid":"MOD:01842"}


id: PBO:0053292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain kinase 2","termid":"PBO:0053292"}


id: GO:0071003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U1, U2, U4/U6 and U5 small nuclear ribonucleoproteins.","definition_xrefs":["GOC:krc","GOC:mah","PMID:11804584","PMID:12724403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"penta-snRNP complex","synonyms":[{"name":"penta-RNP complex","type":"exact"}],"termid":"GO:0071003"}


id: GO:0010024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytochromobilin, which involves the oxidative cleavage of heme by a heme oxygenase(HO) to form biliverdin IX alpha.","definition_xrefs":["PMID:11402195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"phytochromobilin metabolic process","termid":"GO:0051202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0033013"],"is_obsolete":false,"name":"phytochromobilin biosynthetic process","synonyms":[{"name":"phytochromobilin anabolism","type":"exact"},{"name":"phytochromobilin biosynthesis","type":"exact"},{"name":"phytochromobilin formation","type":"exact"},{"name":"phytochromobilin synthesis","type":"exact"}],"termid":"GO:0010024"}


id: PBO:0060727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A13","termid":"PBO:0060727"}


id: PR:P78854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plb1 gene.","definition_xrefs":["UniProtKB:P78854","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.04c","synonyms":[{"name":"Spom972h-plb1","type":"exact"},{"name":"phospholipase B 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78854"}


id: PBO:0043782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase B1","termid":"PBO:0043782"}


id: FYPO:0003549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during one or both meiotic nuclear divisions. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization during meiosis","synonyms":[{"name":"abnormal cellular protein localisation during meiosis","type":"exact"},{"name":"abnormal cellular protein localization during meiosis","type":"exact"},{"name":"abnormal protein localisation during meiosis","type":"exact"},{"name":"abnormal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003549"}


id: PBO:0039937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 1A","termid":"PBO:0039937"}


id: GO:0052626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + ATP + amino acid = benzoyl amino acid conjugate + AMP + diphosphate.","definition_xrefs":["MetaCyc:RXN-10886","PMID:19189963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"benzoate amino acid synthetase activity","synonyms":[{"name":"benzoyl amino acid synthetase activity","type":"exact"}],"termid":"GO:0052626"}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["PMID:9914308","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: PR:O14177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 2a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01120","PANTHER:PTHR10476:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III complex subunit did4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.01","secondary_identifiers":["UniProtKB:O14177"],"synonyms":[{"name":"Spom972h-CHMP2A","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14177"}


id: FYPO:0005160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is normal (i.e. indistinguishable from wild type) after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:16849602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle progression following HU exposure","type":"exact"},{"name":"normal cell cycle progression following cellular response to HU","type":"exact"}],"termid":"FYPO:0005160"}


id: PR:P27584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P27584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein alpha-1 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.06","synonyms":[{"name":"GP1-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpa1","type":"exact"}],"termid":"PR:P27584"}


id: PATO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An area which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"area","termid":"PATO:0001323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased area","termid":"PATO:0002058"}


id: PATO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000803 tactile response value (obsolete PATO:0000803)","termid":"PATO:0000803"}


id: GO:0002777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antimicrobial peptide. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["GOC:add","PMID:11807545","ISBN:0781735149","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: MOD:00290
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-histidine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0285","PubMed:7854413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(N3'-histidinoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00290"}


id: PBO:0071507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 10","termid":"PBO:0071507"}


id: SO:0001372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methyluridine","secondary_identifiers":["RNAMOD:085"],"synonyms":[{"name":"3-methyluridine","type":"exact"},{"name":"m3U","type":"exact"},{"name":"three methyluridine","type":"exact"}],"termid":"SO:0001372"}


id: PBO:0082057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase; catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by phenylalanine or high concentration of tyrosine or tryptophan","termid":"PBO:0082057"}


id: PBO:0031687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peroxisomal_transport","termid":"PBO:0031687"}


id: PR:000027543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P36631-1, Thr-173, MOD:00047|Ser-218, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:11702950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ste11/Phos(T173,S218)","pombase_gene_id":"SPBC32C12.02","synonyms":[{"name":"Spom-ste11/Phos:1","type":"exact"},{"name":"ste11/Phos(T173,S218)","type":"exact"}],"termid":"PR:000027543"}


id: GO:0048616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized, during the post-embryonic phase.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"},{"relation_name":"part_of","term_name":"post-embryonic ectodermal digestive tract morphogenesis","termid":"GO:0048614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic anterior midgut (ectodermal) morphogenesis","termid":"GO:0048616"}


id: PBO:0081116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 5","termid":"PBO:0081116"}


id: PBO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein Pex22 (predicted)","termid":"PBO:0002881"}


id: PBO:0055706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 1 like","termid":"PBO:0055706"}


id: PBO:0090333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER GPI biosynthesis protein Rft1","termid":"PBO:0090333"}


id: PBO:0108509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in pyrimidine or lysine metabolism","termid":"PBO:0108509"}


id: PBO:0013795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A2","termid":"PBO:0013795"}


id: GO:0008096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the epoxide in a juvenile hormone to the corresponding diol.","definition_xrefs":["GOC:mah","PMID:8396141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"juvenile hormone epoxide hydrolase activity","termid":"GO:0008096"}


id: PBO:0043622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage oligomeric matrix protein","termid":"PBO:0043622"}


id: GO:0071424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in rRNA + S-adenosyl-L-methionine = an N(4)-methylcytidine in rRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:19965768","RHEA:62520","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140098","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"rRNA (cytosine-N4-)-methyltransferase activity","termid":"GO:0071424"}


id: PBO:0091266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific arrestin family membrane adaptor Ste7","termid":"PBO:0091266"}


id: GO:0014746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tonic skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"regulates","term_name":"tonic skeletal muscle contraction","termid":"GO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tonic skeletal muscle contraction","termid":"GO:0014746"}


id: PBO:0074649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 38B","termid":"PBO:0074649"}


id: PBO:0042980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 6","termid":"PBO:0042980"}


id: FYPO:0003397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the 35S rRNA primary transcript measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rRNA precursor level","termid":"FYPO:0003601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased 35S rRNA precursor level","synonyms":[{"name":"decreased 35S rRNA precursor accumulation","type":"related"},{"name":"decreased 35S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"decreased 35S rRNA precursor level during vegetative growth","type":"exact"},{"name":"decreased 35S rRNA precursor transcript level","type":"exact"},{"name":"decreased 35S rRNA primary transcript level","type":"exact"},{"name":"reduced 35S rRNA precursor level","type":"exact"}],"termid":"FYPO:0003397"}


id: PBO:0090055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex subunit, Armadillo-type fold Tti1","termid":"PBO:0090055"}


id: PBO:0074956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-7","termid":"PBO:0074956"}


id: PR:O94683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA-processing protein 7 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03610","PANTHER:PTHR13191:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.17","secondary_identifiers":["UniProtKB:O94683"],"synonyms":[{"name":"Spom972h-RRP7A","type":"exact"}],"termid":"PR:O94683"}


id: PBO:0070134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 48 pseudogene","termid":"PBO:0070134"}


id: GO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-guanidino-2-oxopentanoate + H+ = 4-guanidinobutanal + CO2.","definition_xrefs":["EC:4.1.1.75","RHEA:11340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-guanidino-2-oxopentanoate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03178","MetaCyc:4.1.1.75-RXN"],"synonyms":[{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase (4-guanidinobutanal-forming)","type":"related"},{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase activity","type":"related"},{"name":"2-oxo-5-guanidinopentanoate decarboxylase activity","type":"related"},{"name":"2-oxo-5-guanidinovalerate alpha-ketoarginine decarboxylase activity","type":"related"},{"name":"alpha-ketoarginine decarboxylase activity","type":"related"}],"termid":"GO:0047435"}


id: GO:1902458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stomatal opening.","definition_xrefs":["PMID:23766366","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of stomatal opening","termid":"GO:1902456"},{"relation_name":"positively_regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stomatal opening","synonyms":[{"name":"activation of stomatal opening","type":"narrow"},{"name":"up regulation of stomatal opening","type":"exact"},{"name":"up-regulation of stomatal opening","type":"exact"},{"name":"upregulation of stomatal opening","type":"exact"}],"termid":"GO:1902458"}


id: FYPO:0007842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is absent.","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abolished NAT activity","type":"related"},{"name":"abolished protein N-terminal acetyltransferase activity","type":"exact"},{"name":"peptide alpha-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007842"}


id: _global:axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axis_of","secondary_identifiers":["GOREL:0001000"],"termid":"_global:axis_of"}


id: GO:1990832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed slow movement of non-membranous molecules in nerve cell axons. It is comprised of a Slow Component a (SCa) and a Slow Component b (SCb) which differ in transport rates and protein composition.","definition_xrefs":["PMID:6378920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"slow axonal transport","termid":"GO:1990832"}


id: GO:0071635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta production","secondary_identifiers":["GO:2001202"],"synonyms":[{"name":"negative regulation of TGF-B production","type":"exact"},{"name":"negative regulation of TGF-beta production","type":"exact"},{"name":"negative regulation of TGFB production","type":"exact"},{"name":"negative regulation of TGFbeta production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta secretion","type":"narrow"}],"termid":"GO:0071635"}


id: GO:0006535
data:
  {"annotated_genes":["SJAG_00283","SJAG_04305","SJAG_00582","SJAG_02972","SJAG_01880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91697,93088,98074,105659,106702],"is_not":false,"summary":null,"term":"GO:0006535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00582":null,"SJAG_01880":null,"SJAG_02972":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"cysteine biosynthetic process from serine","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CYSTSYN-PWY"],"synonyms":[{"name":"cysteine anabolism from serine","type":"exact"},{"name":"cysteine formation from serine","type":"exact"},{"name":"cysteine synthesis from serine","type":"exact"}],"termid":"GO:0006535","terms_by_termid":{"GO:0006535":null}}


id: PBO:0057299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513c","termid":"PBO:0057299"}


id: PBO:0049212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 3B","termid":"PBO:0049212"}


id: PBO:0060624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 1 like","termid":"PBO:0060624"}


id: PBO:0028152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_aseptate_cell","termid":"PBO:0028152"}


id: GO:0030520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by estrogen binding to an intracellular receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular steroid hormone receptor signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intracellular estrogen receptor signaling pathway","synonyms":[{"name":"estrogen receptor signaling pathway","type":"broad"},{"name":"estrogen receptor signalling pathway","type":"broad"}],"termid":"GO:0030520"}


id: PBO:0012851
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.1","termid":"PBO:0012851"}


id: FYPO:0007161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to oxidative stress","synonyms":[{"name":"increased growth during cellular response to oxidative stress","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to oxidative stress","type":"exact"},{"name":"resistance to oxidative stress during mitotic cell cycle","type":"related"},{"name":"resistance to oxidative stress during vegetative growth","type":"exact"},{"name":"resistant to oxidative stress","type":"exact"}],"termid":"FYPO:0007161"}


id: GO:0070973
data:
  {"annotated_genes":["SJAG_00284","SJAG_03244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91722,97014],"is_not":false,"summary":null,"term":"GO:0070973"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at an endoplasmic reticulum exit site.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_03244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum exit site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to endoplasmic reticulum exit site","type":"exact"},{"name":"protein localization to ER exit site","type":"exact"}],"termid":"GO:0070973","terms_by_termid":{"GO:0070973":null}}


id: PBO:0074134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 2","termid":"PBO:0074134"}


id: PBO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_symbiosis","termid":"PBO:0034297"}


id: PBO:0089688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase alpha subunit","termid":"PBO:0089688"}


id: GO:0030431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sleep","secondary_identifiers":["Wikipedia:Sleep"],"synonyms":[{"name":"diapause","type":"related"},{"name":"dormancy","type":"related"},{"name":"lethargus","type":"related"}],"termid":"GO:0030431"}


id: GO:0015834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycan peptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"peptidoglycan-associated peptide transport","synonyms":[{"name":"murein peptide transport","type":"exact"},{"name":"muropeptide transport","type":"exact"},{"name":"peptidoglycan peptide transport","type":"exact"}],"termid":"GO:0015834"}


id: PBO:0058517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5705","termid":"PBO:0058517"}


id: GO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 neuromedin U receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromedin U receptor binding","termid":"GO:0042922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 neuromedin U receptor binding","synonyms":[{"name":"type 1 neuromedin U receptor ligand","type":"narrow"}],"termid":"GO:0031839"}


id: PBO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19","termid":"PBO:0018292"}


id: PBO:0028331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_mitosis","termid":"PBO:0028331"}


id: PBO:0054129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1495","termid":"PBO:0054129"}


id: GO:0030460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Fungi) (obsolete GO:0030460)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030460"}


id: GO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, resulting in pigment accumulation.","definition_xrefs":["GOC:tb","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigment accumulation","termid":"GO:0043475"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process involved in pigment accumulation","synonyms":[{"name":"pigment biosynthetic process during pigment accumulation","type":"related"}],"termid":"GO:0043477"}


id: GO:0102160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-glucuronate = H+ + cyanidin 3-O-beta-(2-O-beta-D-glucuronosyl)-beta-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.254","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"cyanidin-3-O-glucoside 2-O-glucuronosyltransferase activity","secondary_identifiers":["RHEA:28258","MetaCyc:RXN-11756"],"termid":"GO:0102160"}


id: GO:0000350
data:
  {"annotated_genes":["SJAG_02455","SJAG_01152","SJAG_01200","SJAG_01214"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101034,105062,105750,110546],"is_not":false,"summary":null,"term":"GO:0000350"}]},"cv_name":"biological_process","definition":"Conformational rearrangement of the spliceosomal complex containing the RNA products from the 1st step of splicing to form the catalytic site for the second step of splicing.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0016071","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"generation of catalytic spliceosome for second transesterification step","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000358","GO:0000359"],"synonyms":[{"name":"catalytic spliceosome assembly for second transesterification step","type":"related"},{"name":"formation of catalytic U12-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic U2-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic spliceosome for second transesterification step","type":"exact"},{"name":"formation of spliceosomal A2-2 complex","type":"narrow"},{"name":"formation of spliceosomal C1 complex","type":"narrow"},{"name":"lariat formation, 5'-splice site cleavage","type":"related"},{"name":"spliceosomal A2-3 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-3 complex formation","type":"narrow"},{"name":"spliceosomal C2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal C2 complex formation","type":"narrow"}],"termid":"GO:0000350","terms_by_termid":{"GO:0000350":null}}


id: PBO:0040570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GALT4 antisense RNA 1","termid":"PBO:0040570"}


id: GO:0004476
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104582],"is_not":false,"summary":null,"term":"GO:0004476"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["EC:5.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"mannose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:12356","Reactome:R-HSA-532549","Reactome:R-HSA-3781832","MetaCyc:MANNPISOM-RXN"],"synonyms":[{"name":"D-mannose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-mannose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"mannose phosphate isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphomannoisomerase activity","type":"related"},{"name":"phosphomannose isomerase activity","type":"related"}],"termid":"GO:0004476","terms_by_termid":{"GO:0004476":null}}


id: GO:1901698
data:
  {"annotated_genes":["SJAG_01584","SJAG_03153","SJAG_01626","SJAG_03032","SJAG_01858","SJAG_04583","SJAG_04429","SJAG_07000","SJAG_02774","SJAG_04063","SJAG_00403","SJAG_00766","SJAG_00131","SJAG_04571","SJAG_00948","SJAG_03657","SJAG_03345","SJAG_03841","SJAG_00931","SJAG_03288","SJAG_00941","SJAG_01051","SJAG_00627","SJAG_01854","SJAG_01709","SJAG_02685","SJAG_04345","SJAG_05022","SJAG_04612","SJAG_00126","SJAG_05274","SJAG_04904","SJAG_02694","SJAG_01134","SJAG_00681","SJAG_01585","SJAG_01768","SJAG_02539","SJAG_00790","SJAG_00530","SJAG_04384","SJAG_03227"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83657,98405],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[104303,90694,112575,85771,103868,86177,113312,90915,99114,105769,88902,111366,101475,89772,112035,100915,111943,87606,108172,104366,96949,91182,109664,94418,112776,93162,88215,84050,100157,109179,99597,109958,101001,85893,89291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[112599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[89147,85495],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[91915,89750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01584":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03288":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04063":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04571":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrogen compound","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901698","terms_by_termid":{"GO:0030970":null,"GO:0031990":null,"GO:0036503":null,"GO:0070458":null,"GO:0097466":null}}


id: GO:0003975
data:
  {"annotated_genes":["SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99761],"is_not":false,"summary":null,"term":"GO:0003975"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol.","definition_xrefs":["EC:2.7.8.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446191","Reactome:R-HSA-4549334","MetaCyc:2.7.8.15-RXN","RHEA:13289"],"synonyms":[{"name":"GlcNAc-1-P transferase activity","type":"related"},{"name":"N-acetylglucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-D-N-acetylglucosamine N-acetylglucosamine 1-phosphate transferase activity","type":"related"},{"name":"UDP-GlcNAc:dolichyl-phosphate GlcNAc-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichol phosphate N-acetyl-D-glucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosaminephosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosamine-1-phosphate transferase activity","type":"exact"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine phosphotransferase activity","type":"related"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"chitobiosylpyrophosphoryldolichol synthase activity","type":"related"},{"name":"dolichol phosphate N-acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichyl phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"}],"termid":"GO:0003975","terms_by_termid":{"GO:0003975":null}}


id: PBO:0109937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal Prp22","termid":"PBO:0109937"}


id: PBO:0055711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMBR1 domain containing 1","termid":"PBO:0055711"}


id: PBO:0059425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 2","termid":"PBO:0059425"}


id: PBO:0060893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 2","termid":"PBO:0060893"}


id: GO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on tricoumaroyl spermidine or any of its mono- or dicaffeoyl spermidine derivatives.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}


id: GO:0047203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13-hydroxylupanine + 2-methylcrotonoyl-CoA = 13-(2-methylcrotonoyloxy)lupanine + CoA.","definition_xrefs":["RHEA:12360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"13-hydroxylupinine O-tigloyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04205","MetaCyc:RXN-8694","EC:2.3.1.93"],"synonyms":[{"name":"(E)-2-methylcrotonoyl-CoA:13-hydroxylupinine O-2-methylcrotonoyltransferase activity","type":"related"},{"name":"13-hydroxylupanine acyltransferase activity","type":"related"},{"name":"tigloyl-CoA:13-hydroxylupanine O-tigloyltransferase activity","type":"related"}],"termid":"GO:0047203"}


id: PBO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 3","termid":"PBO:0071462"}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: GO:0140942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl9-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me2.","definition_xrefs":["RHEA:64444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"histone H3K9 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.368"],"synonyms":[{"name":"histone H3-K9 dimethylation","type":"broad"},{"name":"histone H3K9 dimethylase activity","type":"exact"},{"name":"histone H3K9 dimethylation","type":"broad"},{"name":"histone H3K9 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140942"}


id: GO:0044209
data:
  {"annotated_genes":["SJAG_01859","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89740,113017],"is_not":false,"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of adenosine monophosphate (AMP) from derivatives of it (either adenine, ADP or adenosine 3',5'-bisphosphate) without de novo synthesis.","definition_xrefs":["PMID:9864350","GOC:ecd","GOC:jl","PMID:8917457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AMP biosynthetic process","termid":"GO:0006167"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"AMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP biosynthetic process via salvage pathway","type":"exact"},{"name":"adenosine monophosphate salvage","type":"exact"}],"termid":"GO:0044209","terms_by_termid":{"GO:0044209":null}}


id: PBO:0091941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acid amide hydrolase","termid":"PBO:0091941"}


id: PBO:0057256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 483","termid":"PBO:0057256"}


id: PBO:0083459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene IFH1","termid":"PBO:0083459"}


id: GO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains ribosomal RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete rRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071428)","synonyms":[{"name":"rRNA-containing RNP export from nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071428"}


id: PBO:0070028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1325, pseudogene","termid":"PBO:0070028"}


id: GO:0031940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing at telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing at telomere (obsolete GO:0031940)","synonyms":[{"name":"activation of chromatin silencing at telomere","type":"narrow"},{"name":"positive regulation of heterochromatic silencing at telomere","type":"exact"},{"name":"stimulation of chromatin silencing at telomere","type":"narrow"},{"name":"up regulation of chromatin silencing at telomere","type":"exact"},{"name":"up-regulation of chromatin silencing at telomere","type":"exact"},{"name":"upregulation of chromatin silencing at telomere","type":"exact"}],"termid":"GO:0031940"}


id: GO:0008475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.","definition_xrefs":["EC:1.14.11.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine 5-dioxygenase activity","termid":"GO:0070815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"procollagen-lysine 5-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1981104","MetaCyc:PROCOLLAGEN-LYSINE-5-DIOXYGENASE-RXN","RHEA:16569"],"synonyms":[{"name":"collagen lysine hydroxylase activity","type":"related"},{"name":"lysine hydroxylase activity","type":"broad"},{"name":"lysine,2-oxoglutarate 5-dioxygenase activity","type":"broad"},{"name":"lysine-2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"lysyl hydroxylase activity","type":"broad"},{"name":"lysylprotocollagen dioxygenase activity","type":"related"},{"name":"procollagen-L-lysine,2-oxoglutarate:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase activity","type":"related"},{"name":"protocollagen lysine dioxygenase activity","type":"related"},{"name":"protocollagen lysine hydroxylase activity","type":"related"},{"name":"protocollagen lysyl hydroxylase activity","type":"related"}],"termid":"GO:0008475"}


id: PBO:0071756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 3","termid":"PBO:0071756"}


id: PR:Q9Y7S1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein C569.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.02c","synonyms":[{"name":"Spom972h-SPCC569.02c","type":"exact"}],"termid":"PR:Q9Y7S1"}


id: PBO:0089250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor, Noc1 related","termid":"PBO:0089250"}


id: PBO:0068865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 105, pseudogene","termid":"PBO:0068865"}


id: PBO:0046358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha","termid":"PBO:0046358"}


id: PBO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS domain","termid":"PBO:0002531"}


id: GO:0110009
data:
  {"annotated_genes":["SJAG_03011","SJAG_03088","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101326],"is_not":false,"summary":null,"term":"GO:0110009"},{"annotations":[112365,104327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a formin-nucleated actin cable.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle organization","termid":"GO:0061572"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"formin-nucleated actin cable organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110009","terms_by_termid":{"GO:0070649":null,"GO:0110009":null}}


id: PBO:0039227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT1 substrate 1","termid":"PBO:0039227"}


id: PBO:0028440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_sulfur-containing_amino_acid","termid":"PBO:0028440"}


id: GO:0034911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phthalate + O2 + NADH + H+ = phthalate 3,4-cis-dihydrodiol + NAD+.","definition_xrefs":["UM-BBD_reactionID:r1444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phthalate 3,4-dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0034911"}


id: GO:1905912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:BHF","PMID:22362515","GOC:BHF_miRNA","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion export across plasma membrane","synonyms":[{"name":"regulation of calcium ion efflux from cell","type":"exact"},{"name":"regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905912"}


id: PBO:0003357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase","termid":"PBO:0003357"}


id: PBO:0091232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane heme transmembrane transporter Str3","termid":"PBO:0091232"}


id: PR:O74975
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcy1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.02c","synonyms":[{"name":"CCT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTP:phosphocholine cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pcy1","type":"exact"},{"name":"phosphorylcholine transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74975"}


id: PATO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern inhering in a surface by virtue of the bearer's being marked by the presence of dots, punctures, points or pits.","definition_xrefs":["medical-dictionary:medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"punctate","synonyms":[{"name":"dotted","type":"related"},{"name":"spotted","type":"related"},{"name":"stippled","type":"related"}],"termid":"PATO:0001512"}


id: FYECO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leptomycin B (LMB) was added to the medium or assay buffer. LMB inhibits the nuclear export receptor Crm1.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ LMB","synonyms":[{"name":"+ leptomycin B","type":"exact"}],"termid":"FYECO:0000243"}


id: SO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the inactivation of a ligand binding site with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive_ligand_binding_site","synonyms":[{"name":"inactive ligand binding site","type":"exact"}],"termid":"SO:0001560"}


id: PBO:0075109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 158","termid":"PBO:0075109"}


id: PBO:0076505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 5","termid":"PBO:0076505"}


id: MOD:00095
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamine amide.","definition_xrefs":["PubMed:9048550","PubMed:7673220","RESID:AA0086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine amide","synonyms":[{"name":"(2S)-2-aminopentanediamide","type":"exact"},{"name":"GlnN","type":"exact"},{"name":"L-glutamine amide","type":"exact"},{"name":"MOD_RES Glutamine amide","type":"exact"},{"name":"amidated L-glutamine","type":"exact"},{"name":"glutaminamide","type":"exact"}],"termid":"MOD:00095"}


id: PBO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid P component, serum","termid":"PBO:0039692"}


id: PBO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 5","termid":"PBO:0050227"}


id: PBO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides a telomeric cap that prevents Ku from recognising telomeres as double strand breaks (Ku-dependent end-to-end fusions)","termid":"PBO:0018241"}


id: GO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-5-monosubstituted hydantoin = L-5-monosubstituted hydantoin.","definition_xrefs":["EC:5.1.99.5","InterPro:IPR015942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"hydantoin racemase activity","secondary_identifiers":["KEGG_REACTION:R09704","RHEA:46624","MetaCyc:RXN-9781"],"termid":"GO:0036348"}


id: GO:0099178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by an endocannabinoid.","definition_xrefs":["GOC:dos","PMID:15664177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by endocannabinoid","termid":"GO:0098921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by endocanabinoid","synonyms":[{"name":"regulation of endocannabinoid-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:0099178"}


id: PBO:0073649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIK family kinase 3","termid":"PBO:0073649"}


id: PBO:0111873
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4/Rsp5 family","termid":"PBO:0111873"}


id: GO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + oxamate = oxalurate + phosphate.","definition_xrefs":["RHEA:22984","EC:2.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"oxamate carbamoyltransferase activity","secondary_identifiers":["MetaCyc:OXAMATE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R02937"],"synonyms":[{"name":"carbamoyl-phosphate:oxamate carbamoyltransferase activity","type":"related"},{"name":"oxamic transcarbamylase activity","type":"related"}],"termid":"GO:0050205"}


id: PBO:0050704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 1 pseudogene 2","termid":"PBO:0050704"}


id: GO:1990417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of snoRNA from pre-rRNA.","definition_xrefs":["PMID:16908538","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"snoRNA release from pre-rRNA","termid":"GO:1990417"}


id: MOD:00708
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-cysteine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur oxygenated L-cysteine","synonyms":[{"name":"SOxyCys","type":"exact"}],"termid":"MOD:00708"}


id: GO:0046280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chalcone, phenyl steryl ketone or its hydroxylated derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chalcone metabolic process","termid":"GO:0009714"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"chalcone catabolic process","synonyms":[{"name":"chalcone breakdown","type":"exact"},{"name":"chalcone catabolism","type":"exact"},{"name":"chalcone degradation","type":"exact"}],"termid":"GO:0046280"}


id: PBO:0052282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM7A divergent transcript","termid":"PBO:0052282"}


id: PBO:0084067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase component of U5 snRNP involved in mRNA splicing via spliceosome; binds directly to U5 snRNA; proposed to be involved in conformational changes of the spliceosome; similarity to ribosomal translocation factor EF-2","termid":"PBO:0084067"}


id: PBO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression repressed by glucose","termid":"PBO:0000390"}


id: GO:0140758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An metal-dependent isopeptidase activity that cleaves NEDD8 from a target protein to which it is conjugated.","definition_xrefs":["PMID:25628956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"deNEDDylase activity","termid":"GO:0019784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140096","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"metal-dependent deNEDDylase activity","termid":"GO:0140758"}


id: FYPO:0008024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell is lower than normal.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular polyphosphate level","synonyms":[{"name":"decreased level of polyphosphate in cell","type":"broad"}],"termid":"FYPO:0008024"}


id: GO:0009068
data:
  {"annotated_genes":["SJAG_00881","SJAG_02450","SJAG_00714","SJAG_03163","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[108010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[108263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[90403,99968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_02450":null,"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"aspartate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aspartate family amino acid breakdown","type":"exact"},{"name":"aspartate family amino acid catabolism","type":"exact"},{"name":"aspartate family amino acid degradation","type":"exact"}],"termid":"GO:0009068","terms_by_termid":{"GO:0006530":null,"GO:0006533":null,"GO:0006567":null,"GO:0033512":null}}


id: GO:0050032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnonate = 2-dehydro-3-deoxy-L-rhamnonate + H2O.","definition_xrefs":["RHEA:23080","EC:4.2.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-rhamnonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03774","MetaCyc:L-RHAMNONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"L-rhamnonate hydro-lyase (2-dehydro-3-deoxy-L-rhamnonate-forming)","type":"related"},{"name":"L-rhamnonate hydro-lyase activity","type":"related"}],"termid":"GO:0050032"}


id: PBO:0030888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_replication_initiation","termid":"PBO:0030888"}


id: PBO:0051100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-3","termid":"PBO:0051100"}


id: GO:0004299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at peptide bonds with very broad specificity.","definition_xrefs":["EC:3.4.25.1"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase activity (obsolete GO:0004299)","synonyms":[{"name":"multicatalytic endopeptidase","type":"related"},{"name":"proteasome","type":"related"},{"name":"proteasome endopeptidase activity","type":"exact"},{"name":"proteasome endopeptidase complex","type":"related"}],"termid":"GO:0004299"}


id: GO:0018618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + NADPH + H+ + O2 = catechol + CO2 + NADP+ + NH3.","definition_xrefs":["EC:1.14.12.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"anthranilate 1,2-dioxygenase (deaminating, decarboxylating) activity","secondary_identifiers":["MetaCyc:1.14.12.1-RXN","UM-BBD_reactionID:r0577"],"synonyms":[{"name":"AntA","type":"related"},{"name":"AntB","type":"related"},{"name":"AntC","type":"related"},{"name":"anthranilate 1,2-dioxygenase","type":"related"},{"name":"anthranilate dioxygenase activity","type":"exact"},{"name":"anthranilate dioxygenase reductase","type":"narrow"},{"name":"anthranilate hydroxylase activity","type":"broad"},{"name":"anthranilate,NAD(P)H:oxygen oxidoreductase (1,2-hydroxylating, deaminating, decarboxylating)","type":"related"},{"name":"anthranilic acid hydroxylase activity","type":"broad"},{"name":"anthranilic hydroxylase activity","type":"broad"}],"termid":"GO:0018618"}


id: GO:0075011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of germ tube formation","termid":"GO:0075010"},{"relation_name":"positively_regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of germ tube formation","synonyms":[{"name":"positive regulation of germ tube formation on or near host","type":"exact"}],"termid":"GO:0075011"}


id: PBO:0057475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 593","termid":"PBO:0057475"}


id: PBO:0084557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane anchor subunit of succinate dehydrogenase (SDH); involved in coupling the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; has similarity to human SDH subunit D (SDHD), which is implicated in paraganglioma","termid":"PBO:0084557"}


id: PATO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000789 respiratory function value (obsolete PATO:0000789)","termid":"PATO:0000789"}


id: GO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism decreases the frequency, rate or extent of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host synaptic transmission","termid":"GO:0044758"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation by symbiont of host synaptic transmission","termid":"GO:0044759"}


id: GO:2000376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"positively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxygen metabolic process","synonyms":[{"name":"positive regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"positive regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000376"}


id: FYPO:0007730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007730"}


id: PBO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase alpha subunit (predicted)","termid":"PBO:0002099"}


id: GO:0050936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a xanthophore cell. Xanthophores are pigment cells derived from the neural crest. They contain pteridine and/or carotenoid pigments in structures called pterinosomes or xanthosomes. This makes them yellow to orange in appearance.","definition_xrefs":["GOC:jid","GOC:mh","PMID:11858836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xanthophore differentiation","synonyms":[{"name":"xanthophore cell differentiation","type":"exact"}],"termid":"GO:0050936"}


id: GO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that contributes to the establishment of planar cell polarity.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in establishment of planar polarity","termid":"GO:0090250"}


id: PBO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031522"}


id: PBO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2","termid":"PBO:0046344"}


id: GO:0140658
data:
  {"annotated_genes":["SJAG_01938","SJAG_04114","SJAG_02798","SJAG_02521","SJAG_02575","SJAG_02872","SJAG_04038","SJAG_00650","SJAG_00475","SJAG_03036","SJAG_00500","SJAG_02571","SJAG_02906","SJAG_03613","SJAG_02698","SJAG_00925","SJAG_00111","SJAG_01878","SJAG_04755","SJAG_03982","SJAG_04692","SJAG_01653","SJAG_05313","SJAG_02460","SJAG_00980","SJAG_04355","SJAG_04147"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84882,85135,85527,86300,86435,88808,89445,91680,93290,97880,101647,103137,107438,108440,110308,112880,112881,115057],"is_not":false,"summary":null,"term":"GO:0140658"},{"annotations":[84235,94437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[92649,99753,90812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[109284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[111193,84416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140751"},{"annotations":[109496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling.","definition_xrefs":["PMID:21862382","PMID:14729263","PMID:34313222","PMID:19165147","PMID:30867599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00650":null,"SJAG_00925":null,"SJAG_00980":null,"SJAG_01653":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02571":null,"SJAG_02575":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_03036":null,"SJAG_03613":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04114":null,"SJAG_04147":null,"SJAG_04355":null,"SJAG_04692":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent chromatin remodeler activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070615"],"synonyms":[{"name":"ATP hydrolysis-dependent chromatin remodeler activity","type":"exact"},{"name":"ATP-dependent chromatin remodeller activity","type":"exact"},{"name":"ATP-dependent chromatin remodelling","type":"related"},{"name":"ATPase-dependent chromatin remodeler activity","type":"exact"},{"name":"nucleosome-activated ATPase activity","type":"related"},{"name":"nucleosome-dependent ATPase activity","type":"related"}],"termid":"GO:0140658","terms_by_termid":{"GO:0140658":null,"GO:0140665":null,"GO:0140674":null,"GO:0140750":null,"GO:0140751":null,"GO:0140849":null}}


id: GO:0046964
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97539],"is_not":false,"summary":null,"term":"GO:0046964"}]},"cv_name":"molecular_function","definition":"Enables the transfer of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride synthesized from adenosine 5'-phosphosulfate, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-741449"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulphate transporter activity","type":"exact"},{"name":"PAPS transporter activity","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate transmembrane transporter activity","type":"exact"}],"termid":"GO:0046964","terms_by_termid":{"GO:0046964":null}}


id: PBO:0078788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-2","termid":"PBO:0078788"}


id: GO:0052809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond in acharan sulfate, a glycosaminoglycan with a uniformly repeating disaccharide structure of alpha-D-N-acetylglucosaminyl-2-O-sulfo-alpha-L-iduronic acid.","definition_xrefs":["PMID:19566715","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acharan sulfate lyase activity","termid":"GO:0052809"}


id: PBO:0029837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-single_microtubule_bundle","termid":"PBO:0029837"}


id: PBO:0050728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 14","termid":"PBO:0050728"}


id: PBO:0039384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 1A","termid":"PBO:0039384"}


id: GO:0090490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: L-Tryptophan + Oxygen + NADPH + H+ = N-Hydroxy-L-tryptophan + NADP+ + H2O.","definition_xrefs":["KEGG_REACTION:R09583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating)","termid":"GO:0090490"}


id: PBO:0036478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase, PP4 complex subunit Ppe2","termid":"PBO:0036478"}


id: GO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-aspartate out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"},{"relation_name":"is_a","term_name":"L-aspartate transmembrane transport","termid":"GO:0070778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-aspartate transmembrane export from vacuole","termid":"GO:0089703"}


id: PBO:0040287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 2","termid":"PBO:0040287"}


id: GO:0042827
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins.","definition_xrefs":["PMID:10403682","GOC:jl","PMID:11487378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet dense granule","synonyms":[{"name":"bull's eye body","type":"exact"},{"name":"platelet dense body","type":"exact"}],"termid":"GO:0042827"}


id: PR:000059591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arresting-related substrate adaptor Any1 (Schizosaccharomyces pombe) that has been ubiquitinated at the position equivalent to Lys-263 of the amino acid sequence represented by UniProtKB:O60150. Example: UniProtKB:O60150, Lys-263, MOD:01148.","definition_xrefs":["PMID:24876389","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Any1/Ub(K263)","pombase_gene_id":"SPBC18H10.20c","synonyms":[{"name":"Any1/Ub(K263)","type":"exact"},{"name":"Spom-any1/Ubiq:1","type":"exact"},{"name":"UniProtKB:O60150, Lys-263, MOD:01148","type":"exact"}],"termid":"PR:000059591"}


id: PR:O14126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23073:SF7","PRO:DNx","OMA:SCHPO01437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.12c","secondary_identifiers":["UniProtKB:O14126"],"synonyms":[{"name":"Spom972h-PSMC3","type":"exact"}],"termid":"PR:O14126"}


id: PBO:0054800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2213","termid":"PBO:0054800"}


id: PR:Q9UUE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate carboxylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.11c","secondary_identifiers":["UniProtKB:Q9UUE1"],"synonyms":[{"name":"PCB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC17G9.11c","type":"related"},{"name":"Spom972h-PC","type":"exact"},{"name":"pyruvic carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE1"}


id: PATO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000538 alkali sensitivity value (obsolete PATO:0000538)","termid":"PATO:0000538"}


id: PBO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-33","termid":"PBO:0051298"}


id: GO:0032179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The slender tubular outgrowth first produced by most spores in germination.","definition_xrefs":["ISBN:0877799148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"germ tube","secondary_identifiers":["Wikipedia:Germ_tube"],"termid":"GO:0032179"}


id: PBO:0057019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 106b","termid":"PBO:0057019"}


id: GO:0039555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of MDA-5 (also known as IFIH1) by binding to MDA-5 itself. For example, direct binding of viral proteins to the host MDA-5 protein can inhibit interaction of MDA-5 with MAVS, its downstream signaling effector.","definition_xrefs":["VZ:603","PMID:19019954"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host MDA-5 activity via MDA-5 binding (obsolete GO:0039555)","synonyms":[{"name":"suppression by virus of host MDA5 activity by MDA-5 binding","type":"exact"}],"termid":"GO:0039555"}


id: PBO:0059336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S7 pseudogene 1","termid":"PBO:0059336"}


id: PBO:0110804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WRAP53 orthlog Gnr1","termid":"PBO:0110804"}


id: PBO:0068690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 71, pseudogene","termid":"PBO:0068690"}


id: PBO:0034700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading factor (adherin) Mis4","termid":"PBO:0034700"}


id: PBO:0044075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2 tau variant","termid":"PBO:0044075"}


id: PBO:0003402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc5","termid":"PBO:0003402"}


id: GO:0044812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fermentation of organic substances with a net release of hydrogen.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"hydrogen biosynthetic process","termid":"GO:1902422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"fermentative hydrogen production","secondary_identifiers":["Wikipedia:Fermentative_hydrogen_production"],"synonyms":[{"name":"carbohydrate fermentation","type":"exact"}],"termid":"GO:0044812"}


id: GO:1905925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["PMID:15684033","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium assembly (obsolete GO:1905925)","synonyms":[{"name":"down regulation of invadopodium assembly","type":"exact"},{"name":"down regulation of invadopodium formation","type":"exact"},{"name":"down-regulation of invadopodium assembly","type":"exact"},{"name":"down-regulation of invadopodium formation","type":"exact"},{"name":"downregulation of invadopodium assembly","type":"exact"},{"name":"downregulation of invadopodium formation","type":"exact"},{"name":"inhibition of invadopodium assembly","type":"narrow"},{"name":"inhibition of invadopodium formation","type":"narrow"},{"name":"negative regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905925"}


id: GO:0060350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial cartilaginous anlage into bone.","definition_xrefs":["PMID:11680679","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endochondral bone morphogenesis","termid":"GO:0060350"}


id: PBO:0084623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-S-sulfoxide reductase; involved in the response to oxidative stress; protects iron-sulfur clusters from oxidative inactivation along with MXR2; involved in the regulation of lifespan; reduced activity of human homolog implicated in Alzheimer disease","termid":"PBO:0084623"}


id: FYPO:0006537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to a pheromone.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cellular response to pheromone","synonyms":[{"name":"decreased viability following cellular response to pheromone","type":"exact"},{"name":"loss of cell population viability following cellular response to pheromone","type":"exact"},{"name":"loss of viability following pheromone exposure","type":"exact"},{"name":"loss of viability upon cellular response to pheromone","type":"exact"},{"name":"reduced viability following cellular response to pheromone","type":"related"}],"termid":"FYPO:0006537"}


id: GO:0061210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mesonephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in mesonephros development","synonyms":[{"name":"cell-cell signalling involved in mesonephros development","type":"exact"}],"termid":"GO:0061210"}


id: FYPO:0001943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of microtubule binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule binding","termid":"FYPO:0001943"}


id: GO:0031987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion involved in locomotory behavior","synonyms":[{"name":"locomotion during locomotory behaviour","type":"exact"}],"termid":"GO:0031987"}


id: GO:0006673
data:
  {"annotated_genes":["SJAG_03015","SJAG_03953","SJAG_05311","SJAG_04878","SJAG_04913","SJAG_02168","SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91342,93697],"is_not":false,"summary":null,"term":"GO:0006673"},{"annotations":[86957,91452,91936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[88005,108732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol phosphoceramides, any lipid with a phosphodiester bridge between an inositol residue and the ceramide group.","definition_xrefs":["PMID:19726565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_02168":null,"SJAG_03015":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"inositol phosphoceramide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006674"],"synonyms":[{"name":"inositol phosphorylceramide metabolic process","type":"exact"},{"name":"inositol phosphorylceramide metabolism","type":"exact"},{"name":"inositolphosphoceramide metabolism","type":"exact"}],"termid":"GO:0006673","terms_by_termid":{"GO:0006673":null,"GO:0006675":null,"GO:0051999":null}}


id: GO:0034085
data:
  {"annotated_genes":["SJAG_01644","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93357],"is_not":false,"summary":null,"term":"GO:0034085"},{"annotations":[92432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034087"}]},"cv_name":"biological_process","definition":"The process in which the sister chromatids of a replicated chromosome become associated with each other during S phase.","definition_xrefs":["PMID:14623866","GOC:mah","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"establishment of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034085","terms_by_termid":{"GO:0034085":null,"GO:0034087":null}}


id: GO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homo- or hetero-pentameric protein complex that forms a transmembrane channel through which ions may pass in response to acetylcholine binding.","definition_xrefs":["PMID:15579462","GOC:bf","GOC:mah","PMID:12381728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"acetylcholine-gated channel complex","synonyms":[{"name":"nicotinic acetylcholine receptor","type":"broad"},{"name":"nicotinic acetylcholine-gated receptor-channel complex","type":"exact"}],"termid":"GO:0005892"}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: PBO:0066330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN family member 3","termid":"PBO:0066330"}


id: PBO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 7","termid":"PBO:0043526"}


id: GO:0006274
data:
  {"annotated_genes":["SJAG_00998","SJAG_00247","SJAG_04855","SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071946"},{"annotations":[88353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902979"},{"annotations":[98461],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071807"},{"annotations":[111202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071170"},{"annotations":[89554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"The process in which DNA replication at a replication fork ceases; occurs when the replication fork reaches a specific termination site or when two replication forks meet.","definition_xrefs":["GOC:mah","PMID:10209736","PMID:12009298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00998":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006274","terms_by_termid":{"GO:0071170":null,"GO:0071171":null,"GO:0071807":null,"GO:0071946":null,"GO:1902979":null}}


id: SO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA_gene","termid":"SO:0002366"}


id: GO:0032376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sterol transport","termid":"GO:0032373"},{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"positively_regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol transport","synonyms":[{"name":"activation of cholesterol transport","type":"narrow"},{"name":"stimulation of cholesterol transport","type":"narrow"},{"name":"up regulation of cholesterol transport","type":"exact"},{"name":"up-regulation of cholesterol transport","type":"exact"},{"name":"upregulation of cholesterol transport","type":"exact"}],"termid":"GO:0032376"}


id: FYPO:0000812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GO:0007033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole organization during vegetative growth","synonyms":[{"name":"abnormal vacuolar organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuolar organization during vegetative growth","type":"exact"},{"name":"abnormal vacuole organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuole organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000812"}


id: PBO:0066582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhodopsin","termid":"PBO:0066582"}


id: GO:0097547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic vesicle composed of both tubulovesicular and clear core vesicles that transport synaptic vesicle-associated proteins. Proteins carried by synaptic vesicle protein transport vesicles (STVs) include synaptophysin, synapsin Ia, synaptotagmin and synaptobrevin/vesicle-associated membrane protein 2 (VAMP2). STVs are packaged via the trans-Golgi network before being transported through the axon.","definition_xrefs":["GOC:dr","PMID:21569270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"synaptic vesicle protein transport vesicle","synonyms":[{"name":"STV","type":"exact"}],"termid":"GO:0097547"}


id: GO:0002841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of immune response to tumor cell","termid":"GO:0002838"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"negatively_regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"down regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"down-regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"downregulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"inhibition of T cell mediated immune response to tumor cell","type":"narrow"},{"name":"negative regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"negative regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"negative regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"negative regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002841"}


id: PBO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid adenoma","termid":"PBO:0005836"}


id: GO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"negatively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072302"}


id: PBO:0052347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 3A","termid":"PBO:0052347"}


id: PBO:0077335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 72","termid":"PBO:0077335"}


id: PBO:0049523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Q variant histone 1, pseudogene","termid":"PBO:0049523"}


id: PBO:0062691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 2","termid":"PBO:0062691"}


id: PBO:0039232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 1","termid":"PBO:0039232"}


id: GO:0050804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"modulation of chemical synaptic transmission","synonyms":[{"name":"modulation of synaptic transmission","type":"broad"},{"name":"regulation of chemical synaptic transmission","type":"exact"},{"name":"regulation of synaptic transmission","type":"exact"}],"termid":"GO:0050804"}


id: GO:2001219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001219)","synonyms":[{"name":"positive regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001219"}


id: PBO:0079290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 8","termid":"PBO:0079290"}


id: RO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_on_by","termid":"RO:0008508"}


id: PR:O14353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A biotin--protein ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12835:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin--protein ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.07c","secondary_identifiers":["UniProtKB:O14353"],"synonyms":[{"name":"SPBC30D10.07c","type":"related"},{"name":"Spom972h-HLCS","type":"exact"},{"name":"biotin apo-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14353"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: MOD:00086
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoyl-L-lysine.","definition_xrefs":["PubMed:7801126","Unimod:47#K","RESID:AA0077","PubMed:2498336","OMSSA:93","PubMed:7939682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-palmitoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(hexadecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(hexadecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-palmitoyl lysine","type":"exact"},{"name":"N(zeta)-palmitoyllysine","type":"exact"},{"name":"N6-(1-oxohexadecyl)-L-lysine","type":"exact"},{"name":"N6-hexadecanoylated L-lysine","type":"exact"},{"name":"N6-palmitoyl-L-lysine","type":"exact"},{"name":"N6-palmitoylated L-lysine","type":"exact"},{"name":"N6PamLys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"epsilon-palmitoyllysine","type":"exact"},{"name":"palmitoylationk","type":"exact"}],"termid":"MOD:00086"}


id: PBO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120B","termid":"PBO:0047062"}


id: PBO:0073240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 4","termid":"PBO:0073240"}


id: GO:0050542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to icosanoids, any C20 polyunsaturated fatty acids or their derivatives, including the leukotrienes and the prostanoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"icosanoid binding","synonyms":[{"name":"eicosanoid binding","type":"exact"}],"termid":"GO:0050542"}


id: GO:0071191
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v7 and protocadherin-gamma-b4, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"protocadherin-alpha-v7-protocadherin-gamma-b4 complex","synonyms":[{"name":"Pcdha7-Pcdhgb2 complex","type":"narrow"}],"termid":"GO:0071191"}


id: GO:0075217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of spore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"modulation of spore encystment on host","termid":"GO:0075215"},{"relation_name":"negatively_regulates","term_name":"spore encystment","termid":"GO:0075214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore encystment on host","termid":"GO:0075217"}


id: GO:1990702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi cis membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi cis cisterna membrane (obsolete GO:1990702)","synonyms":[{"name":"integral component of cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990702"}


id: PBO:0029364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methylation","termid":"PBO:0029364"}


id: GO:1901526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"positive regulation of autophagy of mitochondrion","termid":"GO:1903599"},{"relation_name":"positively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0007005","GO:0006914"],"is_obsolete":false,"name":"positive regulation of mitophagy","synonyms":[{"name":"activation of macromitophagy","type":"narrow"},{"name":"positive regulation of macromitophagy","type":"exact"},{"name":"up regulation of macromitophagy","type":"exact"},{"name":"up-regulation of macromitophagy","type":"exact"},{"name":"upregulation of macromitophagy","type":"exact"}],"termid":"GO:1901526"}


id: GO:1900571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diorcinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"diorcinol metabolic process","termid":"GO:1900570"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diorcinol catabolic process","synonyms":[{"name":"diorcinol breakdown","type":"exact"},{"name":"diorcinol catabolism","type":"exact"},{"name":"diorcinol degradation","type":"exact"}],"termid":"GO:1900571"}


id: GO:0016544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect taps the female with his frontal leg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, tapping to detect pheromone","synonyms":[{"name":"male courtship behavior, tapping","type":"related"},{"name":"male courtship behaviour, tapping","type":"exact"},{"name":"male courtship behaviour, tapping to detect pheromone","type":"related"}],"termid":"GO:0016544"}


id: PBO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 9","termid":"PBO:0071814"}


id: PBO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis","termid":"PBO:0000123"}


id: MOD:00933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - 5-hydro-5-methylimidazol-4-one, arginine methylglyoxal arginine adduct (+54 amu)","definition_xrefs":["Unimod:319#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","termid":"MOD:00630"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxal arginine adduct (+54 amu)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00933"}


id: FYPO:0000506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export is abnormal. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport during vegetative growth","termid":"FYPO:0000518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear export","synonyms":[{"name":"abnormal nuclear export during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: abnormal","type":"related"}],"termid":"FYPO:0000506"}


id: PBO:0062010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 4 pseudogene","termid":"PBO:0062010"}


id: PBO:0089930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb2","termid":"PBO:0089930"}


id: GO:0051711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"negatively_regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of killing of cells of another organism","secondary_identifiers":["GO:0052490"],"synonyms":[{"name":"down regulation of killing of cells of another organism","type":"exact"},{"name":"down-regulation of killing of cells of another organism","type":"exact"},{"name":"downregulation of killing of cells of another organism","type":"exact"},{"name":"inhibition of killing of cells of another organism","type":"narrow"},{"name":"negative regulation of killing of cells of other organism","type":"exact"}],"termid":"GO:0051711"}


id: GO:1901671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of superoxide dismutase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of superoxide dismutase activity","termid":"GO:1901668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of superoxide dismutase activity","synonyms":[{"name":"activation of Cu,Zn-SOD","type":"related"},{"name":"activation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"activation of Fe-SOD","type":"related"},{"name":"activation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"activation of Mn-SOD","type":"related"},{"name":"activation of SOD","type":"related"},{"name":"activation of SOD-1","type":"related"},{"name":"activation of SOD-2","type":"related"},{"name":"activation of SOD-3","type":"related"},{"name":"activation of SOD-4","type":"related"},{"name":"activation of SODF","type":"related"},{"name":"activation of SODS","type":"related"},{"name":"activation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"activation of cuprein","type":"related"},{"name":"activation of cytocuprein","type":"related"},{"name":"activation of erythrocuprein","type":"related"},{"name":"activation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"activation of hemocuprein","type":"related"},{"name":"activation of hepatocuprein","type":"related"},{"name":"activation of iron superoxide dismutase activity","type":"narrow"},{"name":"activation of iron superoxide oxidoreductase","type":"related"},{"name":"activation of manganese superoxide dismutase activity","type":"narrow"},{"name":"activation of manganese superoxide oxidoreductase","type":"related"},{"name":"activation of nickel superoxide dismutase activity","type":"narrow"},{"name":"activation of nickel superoxide oxidoreductase","type":"related"},{"name":"activation of superoxide dismutase I","type":"related"},{"name":"activation of superoxide dismutase II","type":"related"},{"name":"activation of superoxide dismutase activity","type":"narrow"},{"name":"activation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"activation of zinc superoxide oxidoreductase","type":"related"},{"name":"positive regulation of Cu,Zn-SOD","type":"related"},{"name":"positive regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of Fe-SOD","type":"related"},{"name":"positive regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"positive regulation of Mn-SOD","type":"related"},{"name":"positive regulation of SOD","type":"related"},{"name":"positive regulation of SOD-1","type":"related"},{"name":"positive regulation of SOD-2","type":"related"},{"name":"positive regulation of SOD-3","type":"related"},{"name":"positive regulation of SOD-4","type":"related"},{"name":"positive regulation of SODF","type":"related"},{"name":"positive regulation of SODS","type":"related"},{"name":"positive regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of cuprein","type":"related"},{"name":"positive regulation of cytocuprein","type":"related"},{"name":"positive regulation of erythrocuprein","type":"related"},{"name":"positive regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"positive regulation of hemocuprein","type":"related"},{"name":"positive regulation of hepatocuprein","type":"related"},{"name":"positive regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of iron superoxide oxidoreductase","type":"related"},{"name":"positive regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"positive regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"positive regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"positive regulation of superoxide dismutase I","type":"related"},{"name":"positive regulation of superoxide dismutase II","type":"related"},{"name":"positive regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"up regulation of Cu,Zn-SOD","type":"related"},{"name":"up regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"up regulation of Fe-SOD","type":"related"},{"name":"up regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"up regulation of Mn-SOD","type":"related"},{"name":"up regulation of SOD","type":"related"},{"name":"up regulation of SOD-1","type":"related"},{"name":"up regulation of SOD-2","type":"related"},{"name":"up regulation of SOD-3","type":"related"},{"name":"up regulation of SOD-4","type":"related"},{"name":"up regulation of SODF","type":"related"},{"name":"up regulation of SODS","type":"related"},{"name":"up regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"up regulation of cuprein","type":"related"},{"name":"up regulation of cytocuprein","type":"related"},{"name":"up regulation of erythrocuprein","type":"related"},{"name":"up regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"up regulation of hemocuprein","type":"related"},{"name":"up regulation of hepatocuprein","type":"related"},{"name":"up regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"up regulation of iron superoxide oxidoreductase","type":"related"},{"name":"up regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"up regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"up regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"up regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"up regulation of superoxide dismutase I","type":"related"},{"name":"up regulation of superoxide dismutase II","type":"related"},{"name":"up regulation of superoxide dismutase activity","type":"exact"},{"name":"up regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"up regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"up-regulation of Cu,Zn-SOD","type":"related"},{"name":"up-regulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of Fe-SOD","type":"related"},{"name":"up-regulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"up-regulation of Mn-SOD","type":"related"},{"name":"up-regulation of SOD","type":"related"},{"name":"up-regulation of SOD-1","type":"related"},{"name":"up-regulation of SOD-2","type":"related"},{"name":"up-regulation of SOD-3","type":"related"},{"name":"up-regulation of SOD-4","type":"related"},{"name":"up-regulation of SODF","type":"related"},{"name":"up-regulation of SODS","type":"related"},{"name":"up-regulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of cuprein","type":"related"},{"name":"up-regulation of cytocuprein","type":"related"},{"name":"up-regulation of erythrocuprein","type":"related"},{"name":"up-regulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"up-regulation of hemocuprein","type":"related"},{"name":"up-regulation of hepatocuprein","type":"related"},{"name":"up-regulation of iron superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of iron superoxide oxidoreductase","type":"related"},{"name":"up-regulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of manganese superoxide oxidoreductase","type":"related"},{"name":"up-regulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"up-regulation of nickel superoxide oxidoreductase","type":"related"},{"name":"up-regulation of superoxide dismutase I","type":"related"},{"name":"up-regulation of superoxide dismutase II","type":"related"},{"name":"up-regulation of superoxide dismutase activity","type":"exact"},{"name":"up-regulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"up-regulation of zinc superoxide oxidoreductase","type":"related"},{"name":"upregulation of Cu,Zn-SOD","type":"related"},{"name":"upregulation of Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"upregulation of Fe-SOD","type":"related"},{"name":"upregulation of Mn, Fe superoxide dismutase","type":"narrow"},{"name":"upregulation of Mn-SOD","type":"related"},{"name":"upregulation of SOD","type":"related"},{"name":"upregulation of SOD-1","type":"related"},{"name":"upregulation of SOD-2","type":"related"},{"name":"upregulation of SOD-3","type":"related"},{"name":"upregulation of SOD-4","type":"related"},{"name":"upregulation of SODF","type":"related"},{"name":"upregulation of SODS","type":"related"},{"name":"upregulation of copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"upregulation of cuprein","type":"related"},{"name":"upregulation of cytocuprein","type":"related"},{"name":"upregulation of erythrocuprein","type":"related"},{"name":"upregulation of ferrisuperoxide dismutase activity","type":"narrow"},{"name":"upregulation of hemocuprein","type":"related"},{"name":"upregulation of hepatocuprein","type":"related"},{"name":"upregulation of iron superoxide dismutase activity","type":"narrow"},{"name":"upregulation of iron superoxide oxidoreductase","type":"related"},{"name":"upregulation of manganese superoxide dismutase activity","type":"narrow"},{"name":"upregulation of manganese superoxide oxidoreductase","type":"related"},{"name":"upregulation of nickel superoxide dismutase activity","type":"narrow"},{"name":"upregulation of nickel superoxide oxidoreductase","type":"related"},{"name":"upregulation of superoxide dismutase I","type":"related"},{"name":"upregulation of superoxide dismutase II","type":"related"},{"name":"upregulation of superoxide dismutase activity","type":"exact"},{"name":"upregulation of superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"upregulation of zinc superoxide oxidoreductase","type":"related"}],"termid":"GO:1901671"}


id: PBO:0030324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_palmitoyl-CoA_ligase_activity","termid":"PBO:0030324"}


id: FYPO:0003283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of copper ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal copper import","synonyms":[{"name":"abnormal cellular copper import","type":"exact"},{"name":"abnormal copper cation import","type":"exact"},{"name":"abnormal copper import during mitotic cell cycle","type":"related"},{"name":"abnormal copper import during vegetative growth","type":"exact"},{"name":"abnormal copper import into cell","type":"exact"},{"name":"abnormal copper ion import","type":"exact"},{"name":"abnormal copper ion import across plasma membrane","type":"exact"}],"termid":"FYPO:0003283"}


id: PBO:0089175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23","termid":"PBO:0089175"}


id: PBO:0082122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; responsible for incorporation of N4-acetylcytidine into mRNAs; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance; essential gene; NAT10, the human homolog, implicated in several types of cancer and premature aging","termid":"PBO:0082122"}


id: GO:0021938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in cerebellar granule cells that contributes to the regulation of proliferation of the cells.","definition_xrefs":["PMID:15157725","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation","termid":"GO:0021937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of granule cell precursor cell proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of granule cell precursor cell proliferation","type":"exact"},{"name":"smoothened signalling pathway in regulation of granule cell precursor cell proliferation","type":"exact"}],"termid":"GO:0021938"}


id: GO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"positive regulation of vasculature development","termid":"GO:1904018"},{"relation_name":"positively_regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of angiogenesis","synonyms":[{"name":"activation of angiogenesis","type":"narrow"},{"name":"stimulation of angiogenesis","type":"narrow"},{"name":"up regulation of angiogenesis","type":"exact"},{"name":"up-regulation of angiogenesis","type":"exact"},{"name":"upregulation of angiogenesis","type":"exact"}],"termid":"GO:0045766"}


id: SO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA sequences that are untranslated and lie five prime or three prime to sequences which are translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR","synonyms":[{"name":"untranslated region","type":"exact"}],"termid":"SO:0000203"}


id: PBO:0002712
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.11.-","termid":"PBO:0002712"}


id: GO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.","definition_xrefs":["EC:3.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mannan endo-1,4-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.78-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,4-mannan 4-mannanohydrolase activity","type":"related"},{"name":"beta-D-mannanase activity","type":"related"},{"name":"beta-mannanase B","type":"related"},{"name":"beta-mannanase activity","type":"broad"},{"name":"endo-1,4-beta-mannanase activity","type":"related"},{"name":"endo-1,4-mannanase activity","type":"broad"},{"name":"endo-beta-1,4-mannase activity","type":"related"},{"name":"endo-beta-mannanase activity","type":"broad"}],"termid":"GO:0016985"}


id: SO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: PBO:0030933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_containing_non-uniform_spores","termid":"PBO:0030933"}


id: GO:0009375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of reduced ferredoxin. Hydrogenase contains iron-sulfur clusters, and some contain nickel; it can use molecular hydrogen for the reduction of a variety of substances.","definition_xrefs":["PMID:12792025","PMID:9836629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ferredoxin hydrogenase complex","termid":"GO:0009375"}


id: PBO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INCENP, Pic1","termid":"PBO:0004195"}


id: PBO:0077300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 40","termid":"PBO:0077300"}


id: PBO:0041058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9","termid":"PBO:0041058"}


id: PBO:0073673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 2","termid":"PBO:0073673"}


id: GO:0035252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group from UDP-xylose to an acceptor molecule.","definition_xrefs":["PMID:30127001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-xylosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5617138","Reactome:R-HSA-6785668","Reactome:R-HSA-9638090"],"termid":"GO:0035252"}


id: PBO:0064348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin B2","termid":"PBO:0064348"}


id: GO:0061751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide + choline phosphate + H+ in a neutral environment.","definition_xrefs":["GOC:dph","PMID:26493087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin phosphodiesterase activity","termid":"GO:0004767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"neutral sphingomyelin phosphodiesterase activity","synonyms":[{"name":"neutral SMase","type":"exact"},{"name":"neutral sphingomyelinase","type":"exact"}],"termid":"GO:0061751"}


id: PBO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set3","termid":"PBO:0002816"}


id: PBO:0034284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_in_other_organism","termid":"PBO:0034284"}


id: GO:0038164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the glycoprotein thrombopoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:19630807","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombopoietin receptor activity","termid":"GO:0038164"}


id: PBO:0057014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103b-1","termid":"PBO:0057014"}


id: PBO:0042292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 epsilon subunit of T-cell receptor complex","termid":"PBO:0042292"}


id: PBO:0089835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Brc1-like","termid":"PBO:0089835"}


id: PBO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member A","termid":"PBO:0047089"}


id: GO:1903071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:17872946"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903071)","termid":"GO:1903071"}


id: FYPO:0004004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal pre-replicative complex assembly","synonyms":[{"name":"normal pre-RC assembly","type":"exact"},{"name":"normal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"normal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"normal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0004004"}


id: GO:0098545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"is_a","term_name":"maintenance of protein complex location","termid":"GO:0098544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein complex location in cytoplasm","termid":"GO:0098545"}


id: GO:0009050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycopeptides, a compound in which carbohydrate is covalently attached to an oligopeptide composed of residues of L and/or D-amino acids. The term usually denotes a product of proteolytic degradation of a glycoprotein but includes glycated peptide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycopeptide catabolic process","synonyms":[{"name":"glycopeptide breakdown","type":"exact"},{"name":"glycopeptide catabolism","type":"exact"},{"name":"glycopeptide degradation","type":"exact"}],"termid":"GO:0009050"}


id: FYPO:0007168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the attachment of microtubules to the cell cortex does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished microtubule attachment to cell cortex","synonyms":[{"name":"abolished microtubule anchoring at cell cortex","type":"exact"},{"name":"abolished microtubule cortical anchor activity","type":"exact"}],"termid":"FYPO:0007168"}


id: GO:0019230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors.","definition_xrefs":["ISBN:072168677X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"},{"relation_name":"part_of","term_name":"neuromuscular process controlling posture","termid":"GO:0050884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proprioception","secondary_identifiers":["Wikipedia:Proprioception"],"termid":"GO:0019230"}


id: PBO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.31","termid":"PBO:0003874"}


id: PBO:0035769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_magnesium_level","termid":"PBO:0035769"}


id: PBO:0029573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_abnormal_morphology","termid":"PBO:0029573"}


id: PR:O94622
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized alpha-1,2-galactosyltransferase C1289.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.13c","synonyms":[{"name":"Spom972h-gmh6","type":"exact"}],"termid":"PR:O94622"}


id: PBO:0039195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKNA domain containing 1","termid":"PBO:0039195"}


id: GO:1902261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:11299204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"activation of delayed rectifier potassium channel activity","type":"narrow"},{"name":"up regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"upregulation of delayed rectifier potassium channel activity","type":"exact"}],"termid":"GO:1902261"}


id: GO:0180028
data:
  {"annotated_genes":["SJAG_04489","SJAG_03783","SJAG_05207","SJAG_05303","SJAG_01242"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84204,94153,97069,99915,110885],"is_not":false,"summary":null,"term":"GO:0180028"}]},"cv_name":"cellular_component","definition":"A region of the nuclear envelope to which a spindle pole body (SPB) attaches; protein complexes embedded in the nuclear envelope mediate direct or indirect linkages between the microtubule cytoskeleton and the nuclear envelope.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_05207":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180028","terms_by_termid":{"GO:0180028":null}}


id: PBO:0066141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB associated KRAB zinc finger","termid":"PBO:0066141"}


id: GO:0075130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host protein kinase-mediated signal transduction (obsolete GO:0075130)","synonyms":[{"name":"modulation by symbiont of host protein kinase-mediated signal transduction","type":"exact"}],"termid":"GO:0075130"}


id: PATO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decreased size quality inhering in a bearer by virtue of the bearer's exhibiting reduced number of cells within an organ or tissue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic","secondary_identifiers":["PATO:0000942"],"synonyms":[{"name":"hypoplasia","type":"exact"},{"name":"underdeveloped","type":"related"}],"termid":"PATO:0000645"}


id: PBO:0027396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027396"}


id: PBO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb5","termid":"PBO:0000749"}


id: PBO:0089264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe accessory factor subunit Hcn1/Apc12","termid":"PBO:0089264"}


id: GO:0032093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SAM (Sterile Alpha Motif) domain, which is a 70-amino acid protein sequence that participates in protein-protein, protein-lipid, and protein-RNA interactions and is conserved from lower to higher eukaryotes.","definition_xrefs":["GOC:mcc","PMID:16337230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SAM domain binding","synonyms":[{"name":"Sterile Alpha Motif domain binding","type":"exact"}],"termid":"GO:0032093"}


id: GO:0006857
data:
  {"annotated_genes":["SJAG_02139","SJAG_01983","SJAG_03577","SJAG_05213","SJAG_01344","SJAG_03497","SJAG_01660","SJAG_00922","SJAG_02602","SJAG_05182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[114479,114480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"},{"annotations":[91728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[92271,93252,114338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[63294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035672"},{"annotations":[92272,93253,114339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[104176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[99200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"},{"annotations":[59124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042939"}]},"cv_name":"biological_process","definition":"The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05182":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"oligopeptide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006857","terms_by_termid":{"GO:0034775":null,"GO:0035442":null,"GO:0035672":null,"GO:0036246":null,"GO:0042939":null,"GO:0071996":null,"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:0160007":null,"GO:1901583":null}}


id: GO:0098595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the membrane of an oocyte and a surrounding membranous structure (zona pellucida or perivitelline membrane).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"perivitelline space","termid":"GO:0098595"}


id: PBO:0056111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 2","termid":"PBO:0056111"}


id: PBO:0076267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIM-type zinc finger 7 associated protein 1","termid":"PBO:0076267"}


id: GO:0060280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:kmv","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ovulation","termid":"GO:0060278"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ovulation","termid":"GO:0060280"}


id: GO:0035677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a posterior lateral line neuromast hair cell over time, from its formation to the mature structure. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell development","termid":"GO:0035675"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell differentiation","termid":"GO:0048923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}


id: PBO:0046087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 12","termid":"PBO:0046087"}


id: PBO:0089582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK family cell polarity protein kinase Pom1","termid":"PBO:0089582"}


id: GO:0170044
data:
  {"annotated_genes":["SJAG_04827","SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[83850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of non-proteinogenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"non-proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"non-proteinogenic amino acid breakdown","type":"exact"},{"name":"non-proteinogenic amino acid catabolism","type":"exact"},{"name":"non-proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170044","terms_by_termid":{"GO:0019478":null,"GO:0036088":null}}


id: GO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proliferation of cells in the trophectoderm.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"blastocyst growth","termid":"GO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell proliferation","synonyms":[{"name":"trophectoderm cell proliferation","type":"exact"}],"termid":"GO:0001834"}


id: FYPO:0006473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of amino acid biosynthesis genes from RNA polymerase II promoters occurs to a lower extent than normal in response to starvation for one or more amino acids. Amino acid biosynthesis genes are those whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription of amino acid biosynthesis genes","termid":"FYPO:0006443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation","synonyms":[{"name":"decreased transcription of amino acid biosynthesis genes during cellular response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes from RNA pol II promoter in response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced transcription of amino acid biosynthesis genes in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006473"}


id: GO:1900667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of endocrocin biosynthetic process","synonyms":[{"name":"regulation of endocrocin anabolism","type":"exact"},{"name":"regulation of endocrocin biosynthesis","type":"exact"},{"name":"regulation of endocrocin formation","type":"exact"},{"name":"regulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900667"}


id: PBO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor TFIIS","termid":"PBO:0001345"}


id: PBO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc5","termid":"PBO:0002890"}


id: PBO:0004455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase large subunit Spp2","termid":"PBO:0004455"}


id: GO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O2 + H+ + palmitate = CO2 + 3 H2O + pentadecanal.","definition_xrefs":["RHEA:23960","EC:1.11.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fatty acid peroxidase activity","secondary_identifiers":["KEGG_REACTION:R01703","MetaCyc:FATTY-ACID-PEROXIDASE-RXN"],"synonyms":[{"name":"fatty-acid peroxidase activity","type":"exact"},{"name":"hexadecanoate:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"long chain fatty acid peroxidase activity","type":"related"}],"termid":"GO:0047888"}


id: PBO:0049922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase for meiosis 1","termid":"PBO:0049922"}


id: GO:0061224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mesonephric glomerulus over time from its initial formation until its mature state. The mesonephric glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the mature vertebrate kidney, or mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus development","termid":"GO:0032835"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerulus development","termid":"GO:0061224"}


id: GO:0060879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the semicircular canal by sealing the edges of the pouch that forms during the process of semicircular canal formation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal fusion","termid":"GO:0060879"}


id: PBO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NES","termid":"PBO:0001411"}


id: PBO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 9","termid":"PBO:0071386"}


id: GO:0015282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH oxidase-associated cytochrome b558 hydrogen channel activity (obsolete GO:0015282)","synonyms":[{"name":"NADPH oxidase-associated cytochrome b558 hydrogen channel activity","type":"exact"},{"name":"NADPH oxidase-associated cytochrome b558 proton channel","type":"exact"}],"termid":"GO:0015282"}


id: GO:0014806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle hyperplasia","termid":"GO:0014806"}


id: PBO:0065202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF31 antisense RNA 1","termid":"PBO:0065202"}


id: PBO:0051302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-42 (non-functional)","termid":"PBO:0051302"}


id: GO:1903341
data:
  {"annotated_genes":["SJAG_03048","SJAG_00100","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104550,98562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[112419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25103240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903341","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: GO:0008333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to lysosomes.","definition_xrefs":["ISBN:0716731363","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"endosome to lysosome transport","termid":"GO:0008333"}


id: PBO:0084030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in manganese homeostasis; overproduction suppresses the sod1 (copper, zinc superoxide dismutase) null mutation","termid":"PBO:0084030"}


id: PBO:0034100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genetically_interacts_with","termid":"PBO:0034100"}


id: PBO:0055905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 28","termid":"PBO:0055905"}


id: PR:Q92383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mag1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.04c","synonyms":[{"name":"3-methyladenine DNA glycosidase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3MEA DNA glycosylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mag1","type":"exact"}],"termid":"PR:Q92383"}


id: GO:0090550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of molybdenum.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to molybdenum starvation","termid":"GO:0090550"}


id: GO:0061011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hepatic duct over time, from its formation to the mature structure. The hepatic duct is the duct that leads from the liver to the common bile duct.","definition_xrefs":["GOC:dph","PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct development","termid":"GO:0061009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic duct development","termid":"GO:0061011"}


id: PBO:0076490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 5","termid":"PBO:0076490"}


id: GO:0071750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through a disulfide binded monomer of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds. Dimeric IgA is sometimes complexed additionally with secretory component, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric IgA immunoglobulin complex","termid":"GO:0071749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"dimeric IgA immunoglobulin complex","synonyms":[{"name":"dimeric IgA antibody","type":"exact"},{"name":"dimeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071750"}


id: FYPO:0001999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased nucleoside diphosphate kinase activity","termid":"FYPO:0001999"}


id: PBO:0043480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNPY2 antisense RNA 1","termid":"PBO:0043480"}


id: GO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase biosynthetic process","termid":"GO:0051769"},{"relation_name":"positively_regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051773"],"synonyms":[{"name":"activation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"activation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of NO synthase biosynthesis","type":"exact"},{"name":"positive regulation of NO synthase biosynthetic process","type":"exact"},{"name":"positive regulation of NOS biosynthesis","type":"exact"},{"name":"positive regulation of NOS biosynthetic process","type":"exact"},{"name":"positive regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"positive regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"up-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"upregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"upregulation of nitric-oxide synthase biosynthetic process","type":"exact"}],"termid":"GO:0051770"}


id: GO:1903880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 17alpha-hydroxyprogesterone.","definition_xrefs":["GOC:mr","GO_REF:0000067","GOC:TermGenie","PMID:10802282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"17alpha-hydroxyprogesterone binding","termid":"GO:1903880"}


id: PBO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.-","termid":"PBO:0001122"}


id: GO:0051612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of serotonin uptake","termid":"GO:0051611"},{"relation_name":"negatively_regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of serotonin uptake","synonyms":[{"name":"down regulation of serotonin uptake","type":"exact"},{"name":"down-regulation of serotonin uptake","type":"exact"},{"name":"downregulation of serotonin uptake","type":"exact"},{"name":"negative regulation of 5-HT uptake","type":"exact"},{"name":"negative regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"negative regulation of 5HT uptake","type":"exact"},{"name":"negative regulation of serotonin import","type":"exact"}],"termid":"GO:0051612"}


id: PBO:0088738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip3","termid":"PBO:0088738"}


id: PBO:0070487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 22","termid":"PBO:0070487"}


id: FYPO:0002374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch morphology","termid":"FYPO:0000791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology during mitosis","synonyms":[{"name":"abnormal F-actin patch morphology during mitosis","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic M phase","type":"related"},{"name":"abnormal actin cortical patch morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal actin patch morphology during mitosis","type":"exact"}],"termid":"FYPO:0002374"}


id: GO:1904830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aortic smooth muscle cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF_miRNA","GOC:BHF","GOC:rph","GO_REF:0000058","PMID:22034194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aortic smooth muscle cell differentiation","termid":"GO:1904829"},{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905064"},{"relation_name":"negatively_regulates","term_name":"aortic smooth muscle cell differentiation","termid":"GO:0035887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aortic smooth muscle cell differentiation","synonyms":[{"name":"down regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"down-regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"downregulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"inhibition of aortic smooth muscle cell differentiation","type":"narrow"}],"termid":"GO:1904830"}


id: GO:0034784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pivalyl-CoA = 3-methylbutyryl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"pivalyl-CoA mutase activity","secondary_identifiers":["EC:5.4.99.-"],"termid":"GO:0034784"}


id: FYPO:0004926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the outer surface of the ascospore wall is thicker than normal.","definition_xrefs":["PomBase:mah","PMID:20410137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall morphology","termid":"FYPO:0003138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000121","FYPO:0000631","FYPO:0002946","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased ascospore wall thickness","synonyms":[{"name":"increased spore wall thickness","type":"exact"},{"name":"thick ascospore wall","type":"exact"},{"name":"thickened spore wall","type":"exact"}],"termid":"FYPO:0004926"}


id: PBO:0063137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin beta","termid":"PBO:0063137"}


id: PBO:0086310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with potential role in actin cytoskeleton organization; null mutant is slow-growing, sensitive to Congo Red, impaired in endocytosis, has increased lifespan; gene exhibits synthetic genetic interaction with MSS4 encoding phosphatidylinositol 4-phosphate kinase","termid":"PBO:0086310"}


id: PR:O13878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 75 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02060","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.13","secondary_identifiers":["UniProtKB:O13878"],"synonyms":[{"name":"Spom972h-WDR75","type":"exact"},{"name":"U3 protein 17 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13878"}


id: PBO:0057991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3915","termid":"PBO:0057991"}


id: PBO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (predicted)","termid":"PBO:0001783"}


id: PBO:0045521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin beta","termid":"PBO:0045521"}


id: GO:0018455
data:
  {"annotated_genes":["SJAG_03822","SJAG_01414","SJAG_01986","SJAG_03196","SJAG_01869","SJAG_01457","SJAG_03370","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70275,94917,101233,110800,110799,94918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004022"},{"annotations":[99667,94919,94920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004024"},{"annotations":[88015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NAD(P)+ = an aldehyde + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_01457":null,"SJAG_01869":null,"SJAG_01986":null,"SJAG_03196":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alcohol dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:10736","UM-BBD_reactionID:r0172","MetaCyc:ALCOHOL-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"alcohol:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"aldehyde reductase (NADPH/NADH)","type":"related"}],"termid":"GO:0018455","terms_by_termid":{"GO:0004022":null,"GO:0004024":null,"GO:0047018":null}}


id: GO:0045140
data:
  {"annotated_genes":["SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93699],"is_not":false,"summary":null,"term":"GO:0045140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phytoceramide + inositol phosphate = inositol phosphoceramide + diacylglycerol.","definition_xrefs":["PMID:9405490","PMID:9614099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol phosphoceramide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.227","MetaCyc:RXN3O-581"],"synonyms":[{"name":"IPC synthase activity","type":"exact"}],"termid":"GO:0045140","terms_by_termid":{"GO:0045140":null}}


id: PBO:0081253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 24","termid":"PBO:0081253"}


id: PR:Q9P7W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1703.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.09","synonyms":[{"name":"Spom972h-SPBC1703.09","type":"exact"}],"termid":"PR:Q9P7W1"}


id: PBO:0049638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 41","termid":"PBO:0049638"}


id: PR:P87235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp42 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.10c","synonyms":[{"name":"Spom972h-rhp42","type":"exact"}],"termid":"PR:P87235"}


id: PBO:0049512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 19","termid":"PBO:0049512"}


id: MOD:01813
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a morpholine-2-acetyl group for a hydrogen atom.","definition_xrefs":["Unimod:29","PubMed:10446193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"morpholine-2-acetylated residue","synonyms":[{"name":"N-Succinimidyl-2-morpholine acetate","type":"related"},{"name":"N-succinimidylmorpholine-2-acetate derivative","type":"exact"},{"name":"SMA","type":"related"}],"termid":"MOD:01813"}


id: PBO:0087344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase checkpoint protein required for DNA replication; couples DNA helicase and polymerase; stabilizes Pol2p at stalled replication forks during stress, where it forms a pausing complex with Tof1p and is phosphorylated by Mec1p; defines a novel S-phase checkpoint with Hog1p that coordinates DNA replication and transcription upon osmostress; protects uncapped telomeres; Dia2p-dependent degradation mediates checkpoint recovery; exposure to ethanol affects localization; mammalian claspin homolog","termid":"PBO:0087344"}


id: PBO:0027771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_error-prone_translesion_synthesis","termid":"PBO:0027771"}


id: GO:0046090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyadenosine metabolic process","synonyms":[{"name":"deoxyadenosine metabolism","type":"exact"}],"termid":"GO:0046090"}


id: GO:0007555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of ecdysteroid from a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of ecdysteroid secretion","termid":"GO:0007555"}


id: PBO:0087886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; has direct role in INO1 transcriptional memory; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p; premature stop codon (C1430T, Q477-stop) in SK1 background is linked to the aggressively invasive phenotype of SK1 relative to BY4741 (S288C)","termid":"PBO:0087886"}


id: SO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing. This is less energetically favourable than watson crick base pairing. Hoogsteen GC base pairs only have two hydrogen bonds.","definition_xrefs":["PMID:12177293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hoogsteen_base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Hoogsteen_base_pair"],"synonyms":[{"name":"Hoogsteen base pair","type":"exact"}],"termid":"SO:0000500"}


id: FYPO:0003610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and a branch forms adjacent to an existing septum.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"branched, elongated cell with branch forming adjacent to septum","synonyms":[{"name":"branched, elongated cell with branch forming adjacent to septum during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell with branch forming adjacent to septum during vegetative growth","type":"exact"},{"name":"branched, elongated vegetative cell with branch forming adjacent to septum","type":"exact"}],"termid":"FYPO:0003610"}


id: GO:0039629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=219 symmetry. T=219 icosahedral capsid is composed of 12 pentameric and 2180 hexameric capsomeres for a total of 13140 capsid proteins.","definition_xrefs":["GOC:plm","UniProtKB-KW:KW-1151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=219 icosahedral capsid","termid":"GO:0039629"}


id: PBO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c-Maf inducing protein","termid":"PBO:0043397"}


id: FYPO:0004009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of ribosomal DNA into ribosomal RNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased rRNA transcription","synonyms":[{"name":"decreased rDNA transcription","type":"exact"},{"name":"decreased rRNA transcription during mitotic cell cycle","type":"related"},{"name":"decreased rRNA transcription during vegetative growth","type":"exact"},{"name":"decreased ribosomal RNA transcription","type":"exact"},{"name":"reduced rRNA transcription","type":"exact"}],"termid":"FYPO:0004009"}


id: GO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"insulin receptor binding","synonyms":[{"name":"insulin receptor ligand","type":"narrow"}],"termid":"GO:0005158"}


id: PBO:0057462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 581","termid":"PBO:0057462"}


id: GO:0015179
data:
  {"annotated_genes":["SJAG_00543","SJAG_04588","SJAG_03899","SJAG_04984","SJAG_04718","SJAG_00626","SJAG_04725","SJAG_03400","SJAG_00522","SJAG_02029","SJAG_03256","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92231],"is_not":false,"summary":null,"term":"GO:0015179"},{"annotations":[96418,94423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[92230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[96543,100031,93561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[106223,98989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[100032,92763,94424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[93562,100033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[98990,106224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[98991,96544,93563,106225,100034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[94425,104099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[97396,96535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[100035,86842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[100036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the L-enantiomers of amino acids.","definition_xrefs":["GOC:jsg","ISBN:0815340729","GOC:ai","GOC:mah","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03899":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-212614"],"synonyms":[{"name":"L-amino acid transporter activity","type":"broad"}],"termid":"GO:0015179","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0034639":null,"GO:0061459":null}}


id: GO:1902457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of stomatal opening","termid":"GO:1902456"},{"relation_name":"negatively_regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomatal opening","synonyms":[{"name":"down regulation of stomatal opening","type":"exact"},{"name":"down-regulation of stomatal opening","type":"exact"},{"name":"downregulation of stomatal opening","type":"exact"},{"name":"inhibition of stomatal opening","type":"narrow"}],"termid":"GO:1902457"}


id: GO:0070183
data:
  {"annotated_genes":["SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93492],"is_not":false,"summary":null,"term":"GO:0070183"}]},"cv_name":"biological_process","definition":"The process of coupling tryptophan to tryptophanyl-tRNA in a mitochondrion, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophanyl-tRNA aminoacylation","termid":"GO:0006436"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0140053","GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tryptophanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070183","terms_by_termid":{"GO:0070183":null}}


id: PBO:0080550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 9","termid":"PBO:0080550"}


id: PBO:0048981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 4 (gene/pseudogene)","termid":"PBO:0048981"}


id: GO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a phyllome over time, from its formation to the mature structure. A phyllome is a collective term for all the different types of leaves appearing on plants.","definition_xrefs":["GOC:devbiol","PO:0006001","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phyllome development","termid":"GO:0048827"}


id: GO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high-density lipoprotein receptor.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor binding","termid":"GO:0070325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"high-density lipoprotein particle receptor binding","synonyms":[{"name":"HDL receptor binding","type":"exact"},{"name":"high-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:0070653"}


id: PBO:0026837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G1_phase","termid":"PBO:0026837"}


id: FYPO:0000477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of meiosis","synonyms":[{"name":"delayed meiosis","type":"exact"},{"name":"delayed onset of meiotic nuclear division","type":"exact"},{"name":"meiosis: delayed","type":"related"}],"termid":"FYPO:0000477"}


id: GO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that contributes to sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo pheromone-induced unidirectional conjugation.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular morphogenesis involved in pheromone-induced unidirectional conjugation (obsolete GO:0000764)","synonyms":[{"name":"cellular morphogenesis during pheromone-induced unidirectional","type":"related"},{"name":"cellular morphogenesis involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000764"}


id: PBO:0063089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 7","termid":"PBO:0063089"}


id: PBO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin F","termid":"PBO:0044061"}


id: GO:0160024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Leydig cells, resulting in the expansion of a cell population. Leydig cells are interstitial cells located adjacent to the seminiferous tubules in the testis which produce testosterone.","definition_xrefs":["PMID:29632025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Leydig cell proliferation","termid":"GO:0160024"}


id: PBO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator (predicted)","termid":"PBO:0014297"}


id: PBO:0031134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_oxidative_stress","termid":"PBO:0031134"}


id: GO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:12956429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostasis","synonyms":[{"name":"B lymphocyte homeostasis","type":"exact"},{"name":"B-cell homeostasis","type":"exact"},{"name":"B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001782"}


id: GO:0065005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein-lipid complex assembly","termid":"GO:0065005"}


id: GO:0072598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a chloroplast.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chloroplast","synonyms":[{"name":"protein localisation to chloroplast","type":"exact"}],"termid":"GO:0072598"}


id: PBO:0057406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-3","termid":"PBO:0057406"}


id: GO:0097644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)).","definition_xrefs":["PMID:10871296","PMID:12037140","PMID:18687416","InterPro:IPR021116","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcitonin family binding","termid":"GO:0097644"}


id: PBO:0069176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 430, pseudogene","termid":"PBO:0069176"}


id: PBO:0078463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-1","termid":"PBO:0078463"}


id: PBO:0074357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4","termid":"PBO:0074357"}


id: PBO:0058866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9899","termid":"PBO:0058866"}


id: GO:0022620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microgametophyte. The microgametophyte vegetative cell gives rise to the pollen tube.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microgametophyte vegetative cell differentiation","synonyms":[{"name":"tube cell differentiation","type":"related"},{"name":"vegetative cell differentiation","type":"related"}],"termid":"GO:0022620"}


id: SO:1000141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome that occurred by the division of a larger chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_fission","synonyms":[{"name":"chromosome fission","type":"exact"}],"termid":"SO:1000141"}


id: PBO:0030849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_translation","termid":"PBO:0030849"}


id: GO:0021622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the oculomotor nerve is generated and organized. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve morphogenesis","synonyms":[{"name":"CN III morphogenesis","type":"related"}],"termid":"GO:0021622"}


id: PBO:0074078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 2","termid":"PBO:0074078"}


id: PBO:0066775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 73","termid":"PBO:0066775"}


id: PBO:0090028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, metallo-beta-lactamase/beta-CASP protein Cft2","termid":"PBO:0090028"}


id: GO:0046863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and iincreases the activity of rubisco by the removal of otherwise inhibitory sugar phosphates: RuBP, and in some plants, 2-carboxyarabinitol 1-phosphate.","definition_xrefs":["PMID:10965036","PMID:2404515","PMID:10430961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity","secondary_identifiers":["GO:0018236"],"synonyms":[{"name":"ribulose-1,5-bisphosphate carboxylase/oxygenase activase activity","type":"exact"},{"name":"ribulose-bisphosphate carboxylase activase activity","type":"exact"},{"name":"rubisco activase activity","type":"exact"},{"name":"rubisco activator","type":"exact"}],"termid":"GO:0046863"}


