# terms

id: PBO:0051277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-8","termid":"PBO:0051277"}


id: GO:2000906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"positively_regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of starch metabolic process","synonyms":[{"name":"positive regulation of starch metabolism","type":"exact"}],"termid":"GO:2000906"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: PR:Q9USN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gdh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USN5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-specific glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC132.04c","synonyms":[{"name":"NAD-GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gdh2","type":"exact"}],"termid":"PR:Q9USN5"}


id: GO:0019174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahydrothiophene 1-oxide + reduced acceptor = tetrahydrothiophene + acceptor.","definition_xrefs":["MetaCyc:THTOREDUCT-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetrahydrothiophene 1-oxide reductase activity","termid":"GO:0019174"}


id: PBO:0091199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys","termid":"PBO:0091199"}


id: GO:0103057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A19 + O2 + 2-oxoglutarate = H+ + gibberellin A20 + 2 carbon dioxide + succinate.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gibberellin A19, 2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN1F-169"],"termid":"GO:0103057"}


id: GO:0021914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smoothened signaling that is involved in the patterns of cell differentiation in the ventral spinal cord.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb","PMID:11262869","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"negatively_regulates","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"down regulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"down-regulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"downregulation of smoothened signaling pathway in ventral spinal cord patterning","type":"exact"},{"name":"inhibition of smoothened signaling pathway in ventral spinal cord patterning","type":"narrow"},{"name":"negative regulation of hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"negative regulation of hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"negative regulation of smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021914"}


id: GO:0007201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete G-protein dissociation (obsolete GO:0007201)","synonyms":[{"name":"G-protein dissociation","type":"exact"}],"termid":"GO:0007201"}


id: GO:0032786
data:
  {"annotated_genes":["SJAG_02057","SJAG_01151","SJAG_03061","SJAG_03118","SJAG_00150","SJAG_01149","SJAG_01213","SJAG_03967","SJAG_02551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105070,107110],"is_not":false,"summary":null,"term":"GO:0032786"},{"annotations":[101545,102223,92009,99244,105232,111475,113168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA-templated transcription, elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of RNA elongation","type":"broad"},{"name":"positive regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"positive regulation of transcription elongation","type":"broad"},{"name":"positive regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"positive regulation of transcriptional elongation","type":"broad"},{"name":"positive transcription elongation regulator activity","type":"related"},{"name":"stimulation of RNA elongation","type":"broad"},{"name":"up regulation of RNA elongation","type":"broad"},{"name":"up-regulation of RNA elongation","type":"broad"},{"name":"upregulation of RNA elongation","type":"broad"}],"termid":"GO:0032786","terms_by_termid":{"GO:0032786":null,"GO:0032968":null}}


id: PBO:0090850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ufe1","termid":"PBO:0090850"}


id: PR:Q10427
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A maltodextrin glucosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04696","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized glycosyl hydrolase C11E10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.09c","secondary_identifiers":["UniProtKB:Q10427"],"synonyms":[{"name":"Spom972h-malZ","type":"exact"}],"termid":"PR:Q10427"}


id: FYPO:0002412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable, elongated, and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable curved elongated vegetative cell population (obsolete FYPO:0002412)","synonyms":[{"name":"inviable curved long vegetative cell population","type":"exact"},{"name":"population of curved inviable long cells","type":"exact"}],"termid":"FYPO:0002412"}


id: PBO:0063253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta cluster","termid":"PBO:0063253"}


id: GO:0005715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in pachytene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"late recombination nodule","termid":"GO:0005715"}


id: PR:Q9UTM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.02c","secondary_identifiers":["UniProtKB:Q9UTM4"],"synonyms":[{"name":"CCT-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT5","type":"exact"},{"name":"TCP-1-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTM4"}


id: PBO:0063556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plaque enriched lncRNA in atherosclerotic and inflammatory bowel macrophage regulation","termid":"PBO:0063556"}


id: GO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose.","definition_xrefs":["EC:3.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosidase activity","termid":"GO:0015928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"alpha-L-fucosidase activity","secondary_identifiers":["RHEA:12288","MetaCyc:ALPHA-L-FUCOSIDASE-RXN","Reactome:R-HSA-5693807"],"synonyms":[{"name":"alpha-L-fucoside fucohydrolase activity","type":"related"},{"name":"alpha-fucosidase activity","type":"related"}],"termid":"GO:0004560"}


id: GO:0070386
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A procollagen-proline 4-dioxygenase complex that contains alpha subunits of the type I isoform; its activity is readily inhibited by poly(L-proline).","definition_xrefs":["PMID:7753822","PMID:14500733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline 4-dioxygenase complex","termid":"GO:0016222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase complex, alpha(I) type","synonyms":[{"name":"procollagen-proline, 2-oxoglutarate-4-dioxygenase complex, alpha(I) type","type":"exact"},{"name":"prolyl 4-hydroxylase complex (alpha(I)-type)","type":"broad"}],"termid":"GO:0070386"}


id: GO:0046306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"alkanesulfonate catabolic process","synonyms":[{"name":"alkanesulfonate breakdown","type":"exact"},{"name":"alkanesulfonate catabolism","type":"exact"},{"name":"alkanesulfonate degradation","type":"exact"},{"name":"alkanesulphonate catabolic process","type":"exact"},{"name":"alkanesulphonate catabolism","type":"exact"}],"termid":"GO:0046306"}


id: GO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: cholest-5-ene-3beta,25-diol + NADPH + H+ + O2 = cholest-5-ene-3beta,7alpha,25-triol + NADP+ + H2O, and cholest-5-ene-3beta,27-diol + NADPH + H+ + O2 = cholest-5-ene-3beta,7alpha,27-triol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"25-hydroxycholesterol 7alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7981","RHEA:19041","MetaCyc:RXN-7980"],"synonyms":[{"name":"25-hydroxycholesterol 7alpha-monooxygenase activity","type":"related"},{"name":"CYP7B1","type":"related"},{"name":"CYP7B1 oxysterol 7alpha-hydroxylase activity","type":"related"},{"name":"cholest-5-ene-3beta,25-diol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033783"}


id: PBO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 5","termid":"PBO:0046563"}


id: FYPO:0004095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization during meiotic cell cycle","synonyms":[{"name":"normal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004095"}


id: PBO:0061131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor pseudogene 1","termid":"PBO:0061131"}


id: PBO:0073434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 4","termid":"PBO:0073434"}


id: GO:0044292
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure at the distal end of a dendrite adapted to carry out a specific function, e.g. dendriole.","definition_xrefs":["GOC:jl","NIF_Subcellular:sao28175134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendrite terminus","synonyms":[{"name":"dendrite terminal","type":"exact"},{"name":"dendrite terminal specialization","type":"related"},{"name":"terminal specialization","type":"related"},{"name":"terminal specialization of a dendrite","type":"exact"}],"termid":"GO:0044292"}


id: PBO:0087208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; required for wybutosine formation in phenylalanine-accepting tRNA; member of the seven beta-strand family","termid":"PBO:0087208"}


id: GO:0030963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dihydroxylation of peptidyl-lysine to peptidyl-4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","PMID:10978343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine dihydroxylation to 4,5-dihydroxy-L-lysine","termid":"GO:0030963"}


id: GO:0008139
data:
  {"annotated_genes":["SJAG_00962","SJAG_00840","SJAG_04411","SJAG_01013","SJAG_03729","SJAG_03662","SJAG_01909","SJAG_02998","SJAG_03959","SJAG_03299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85246,88131,89641,90199,91967,92327,99570,99861,112008,114842],"is_not":false,"summary":null,"term":"GO:0008139"}]},"cv_name":"molecular_function","definition":"Binding to a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00840":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01909":null,"SJAG_02998":null,"SJAG_03299":null,"SJAG_03662":null,"SJAG_03729":null,"SJAG_03959":null,"SJAG_04411":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"nuclear localization sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NLS binding","type":"exact"},{"name":"nuclear localisation sequence binding","type":"exact"},{"name":"nuclear localization signal binding","type":"exact"}],"termid":"GO:0008139","terms_by_termid":{"GO:0008139":null}}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:14754397","PMID:12905029","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: GO:1900022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of D-erythro-sphingosine kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid kinase activity","termid":"GO:0043550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of D-erythro-sphingosine kinase activity","synonyms":[{"name":"regulation of sphingosine kinase activity","type":"exact"}],"termid":"GO:1900022"}


id: GO:1905625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-methionine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:17556368","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-methionine import across plasma membrane","termid":"GO:1905624"},{"relation_name":"negatively_regulates","term_name":"L-methionine import across plasma membrane","termid":"GO:1905544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of L-methionine import across plasma membrane","termid":"GO:1905625"}


id: PBO:0045889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 1","termid":"PBO:0045889"}


id: SO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Copia superfamily contain elements coding for specific proteins in this order: GAG, AP, INT, RT, RH. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copia_LTR_retrotransposon","synonyms":[{"name":"Copia LTR retrotransposon","type":"exact"},{"name":"RLC retrotransposon","type":"exact"},{"name":"Ty1 retrotransposon","type":"exact"}],"termid":"SO:0002264"}


id: FYPO:0003023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethyl N-phenylcarbamate (EPC).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on EPC","synonyms":[{"name":"normal cell population growth in presence of EPC","type":"exact"},{"name":"normal cell population growth on EPC","type":"exact"},{"name":"normal cell population growth on ethyl N-phenylcarbamate","type":"exact"},{"name":"normal cellular response to EPC","type":"related"},{"name":"normal vegetative cell population growth on EPC","type":"exact"}],"termid":"FYPO:0003023"}


id: GO:1900600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving endocrocin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"endocrocin metabolic process","synonyms":[{"name":"endocrocin metabolism","type":"exact"}],"termid":"GO:1900600"}


id: GO:0061421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving oleic acid that activates or increases the rate of transcription.","definition_xrefs":["GOC:dph","PMID:20395639"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription by oleic acid (obsolete GO:0061421)","termid":"GO:0061421"}


id: PBO:0017482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_downstream_of","termid":"PBO:0017482"}


id: FYPO:0000128
data:
  {"alleles_by_uniquename":{"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"},"SJAG_03164:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03164","name":"ura4delta","uniquename":"SJAG_03164:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115400,115376,115399,115401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000747"},{"annotations":[115377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001012"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell requires a particular organic compound, which is not required by a wild-type cell for its growth. Auxotrophy usually results from a cell's inability to synthesize the compound.","definition_xrefs":["PomBase:mah","PATO:0000422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_03164":null},"genotype_count":4,"genotypes_by_uniquename":{"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domE(S427>stop)","display_uniquename":"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-1","expression":"Not assayed or wild type"}]}]},"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domK(Q262A aa)","display_uniquename":"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-2","expression":"Not assayed or wild type"}]}]},"ade6delta":{"display_name":"ade6delta","display_uniquename":"ade6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-3","expression":"Null"}]}]},"ura4delta":{"display_name":"ura4delta","display_uniquename":"ura4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03164:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"auxotrophy","references_by_uniquename":{"PMID:19330769":null,"PMID:21905090":null},"single_locus_annotated_genes":["SJAG_01081","SJAG_03164"],"single_locus_genotype_uniquenames":["ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","ade6delta","ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","ura4delta"],"synonyms":[{"name":"auxotrophic growth","type":"exact"},{"name":"auxotrophy during mitotic cell cycle","type":"related"},{"name":"auxotrophy during vegetative growth","type":"exact"}],"termid":"FYPO:0000128","terms_by_termid":{"FYPO:0000747":null,"FYPO:0001012":null}}


id: FYPO:0002882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription","synonyms":[{"name":"normal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0002882"}


id: PBO:0074139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A4","termid":"PBO:0074139"}


id: PBO:0002118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Vps8 (predicted)","termid":"PBO:0002118"}


id: PBO:0061026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 9","termid":"PBO:0061026"}


id: MOD:01903
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks two L-serine residues to form serine oxazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0574","PubMed:21950656","PubMed:21568297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine oxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1-azanyl-2-hydroxyethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Ser-Ser)","type":"exact"},{"name":"L-serine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01903"}


id: FYPO:0002751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sulfate ions into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sulfate import","termid":"FYPO:0002750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased sulfate import","synonyms":[{"name":"decreased sulfate import across plasma membrane","type":"exact"},{"name":"decreased sulfate import during mitotic cell cycle","type":"related"},{"name":"decreased sulfate import during vegetative growth","type":"exact"},{"name":"decreased sulfate import into cell","type":"exact"},{"name":"decreased sulfate ion import","type":"exact"},{"name":"decreased sulfate uptake","type":"exact"},{"name":"decreased sulphate import","type":"exact"},{"name":"decreased sulphate ion import","type":"exact"},{"name":"reduced sulfate import","type":"exact"}],"termid":"FYPO:0002751"}


id: PBO:0039160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 5","termid":"PBO:0039160"}


id: GO:1903226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GOC:als","PMID:23154389","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"positively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodermal cell differentiation","synonyms":[{"name":"activation of endoderm cell differentiation","type":"narrow"},{"name":"activation of endodermal cell differentiation","type":"narrow"},{"name":"positive regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endodermal cell differentiation","type":"exact"},{"name":"up-regulation of endoderm cell differentiation","type":"exact"},{"name":"up-regulation of endodermal cell differentiation","type":"exact"},{"name":"upregulation of endoderm cell differentiation","type":"exact"},{"name":"upregulation of endodermal cell differentiation","type":"exact"}],"termid":"GO:1903226"}


id: GO:0060521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from urogenital sinus mesenchymal cells to cells of the urogenital epithelium resulting in the epithelial cells adopting a prostatic fate.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive mesenchymal to epithelial cell signaling","termid":"GO:0060522"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling involved in prostate gland development","termid":"GO:0060739"},{"relation_name":"part_of","term_name":"prostate induction","termid":"GO:0060514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in prostate induction","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in prostate induction","type":"exact"}],"termid":"GO:0060521"}


id: PBO:0063522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prodynorphin","termid":"PBO:0063522"}


id: PBO:0057740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1470","termid":"PBO:0057740"}


id: GO:0000147
data:
  {"annotated_genes":["SJAG_01384","SJAG_00521","SJAG_04052","SJAG_04001","SJAG_02511","SJAG_03146","SJAG_04465","SJAG_03119","SJAG_03086","SJAG_02075","SJAG_02245","SJAG_02228","SJAG_04100","SJAG_00649","SJAG_04644","SJAG_02177","SJAG_03044","SJAG_01732","SJAG_01964","SJAG_04886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84401,86053,86897,90993,94114,95860,96035,99251,99443,99499,101338,103345,106887,107214,107859,108361,108384,111063,114636,114989],"is_not":false,"summary":null,"term":"GO:0000147"}]},"cv_name":"biological_process","definition":"Assembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane of fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actin cortical patch organization","termid":"GO:0044396"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00521":null,"SJAG_00649":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02511":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03119":null,"SJAG_03146":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04100":null,"SJAG_04465":null,"SJAG_04644":null,"SJAG_04886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"actin cortical patch assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000147","terms_by_termid":{"GO:0000147":null}}


id: PBO:0078347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 13-1","termid":"PBO:0078347"}


id: PBO:0028260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubules_present_in_decreased_numbers","termid":"PBO:0028260"}


id: PBO:0055904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 27","termid":"PBO:0055904"}


id: GO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose biosynthetic process","termid":"GO:0030244"},{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"},{"relation_name":"is_a","term_name":"plant-type cell wall cellulose metabolic process","termid":"GO:0052541"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"cell wall cellulose biosynthesis","type":"exact"},{"name":"cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:0052324"}


id: PBO:0082815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0082815"}


id: PBO:0049444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 2","termid":"PBO:0049444"}


id: PR:G2TRT6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.16","synonyms":[{"name":"Spom972h-SPCC417.16","type":"exact"}],"termid":"PR:G2TRT6"}


id: FYPO:0003512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynine (N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"hercynine absent from cell","synonyms":[{"name":"N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine absent from cell","type":"exact"}],"termid":"FYPO:0003512"}


id: PBO:0067586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 745, pseudogene","termid":"PBO:0067586"}


id: PBO:0086617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YNL115C is not an essential gene","termid":"PBO:0086617"}


id: PBO:0062008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 2","termid":"PBO:0062008"}


id: GO:1901961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isobutanol.","definition_xrefs":["GOC:mengo_curators","PMID:22224870","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"isobutanol metabolic process","termid":"GO:1901960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isobutanol biosynthetic process","synonyms":[{"name":"isobutanol anabolism","type":"exact"},{"name":"isobutanol biosynthesis","type":"exact"},{"name":"isobutanol formation","type":"exact"},{"name":"isobutanol synthesis","type":"exact"}],"termid":"GO:1901961"}


id: GO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dATP + depurinated DNA = ribose triphosphate + DNA.","definition_xrefs":["EC:2.6.99.1","MetaCyc:DATPDGTP--DNA-PURINE-TRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140097","GO:0016769"],"is_obsolete":false,"name":"dATP(dGTP)-DNA purinetransferase activity","synonyms":[{"name":"dATP(dGTP)--DNA purine transferase activity","type":"exact"},{"name":"dATP(dGTP):depurinated-DNA purine transferase activity","type":"related"}],"termid":"GO:0047839"}


id: GO:0045669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoblast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of osteoblast differentiation","termid":"GO:0045667"},{"relation_name":"positively_regulates","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoblast differentiation","synonyms":[{"name":"activation of osteoblast differentiation","type":"narrow"},{"name":"stimulation of osteoblast differentiation","type":"narrow"},{"name":"up regulation of osteoblast differentiation","type":"exact"},{"name":"up-regulation of osteoblast differentiation","type":"exact"},{"name":"upregulation of osteoblast differentiation","type":"exact"}],"termid":"GO:0045669"}


id: GO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a trophoblast giant cell of the placenta. Trophoblast giant cells are the cell of the placenta that line the maternal decidua.","definition_xrefs":["GOC:dph","PMID:16269175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophoblast giant cell differentiation","termid":"GO:0060707"}


id: MOD:01221
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-formyl-L-threonine.","definition_xrefs":["Unimod:122#T","PubMed:15799070","PubMed:11861642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-formyl-L-threonine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01221"}


id: GO:0006133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methylenetetrahydrofolate oxidation (obsolete GO:0006133)","synonyms":[{"name":"5,10-methylenetetrahydrofolate oxidation","type":"exact"}],"termid":"GO:0006133"}


id: GO:0000077
data:
  {"annotated_genes":["SJAG_01429","SJAG_00640","SJAG_01873","SJAG_00169","SJAG_03942","SJAG_02771","SJAG_01855","SJAG_02266","SJAG_02576","SJAG_00327","SJAG_04332","SJAG_00364","SJAG_04671","SJAG_01146","SJAG_05373","SJAG_03026","SJAG_04140","SJAG_03160","SJAG_02098","SJAG_00486","SJAG_01205","SJAG_03898","SJAG_02026","SJAG_01084","SJAG_04287","SJAG_01708","SJAG_00623","SJAG_03048","SJAG_04280","SJAG_01680","SJAG_02563","SJAG_01044","SJAG_03720","SJAG_00429","SJAG_01677","SJAG_01605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105515],"is_not":false,"summary":null,"term":"GO:0000077"},{"annotations":[112185,79034,112416,113858,95374,90146,98543,87992,105516,102801,89766,107390,110444,110651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[105875,87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[105518,84794,97232,113859,90149,107922,110445,102803,113188,96715,85354,87634,87993,95542,86442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[108229,88733,86667,95376,98545,112244,92215,113269,85355,112245,95543,107923,84795,87635,85400,97037,97704,103861,90738,102804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a DNA damage checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"},{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:DNA_damage_checkpoint","Wikipedia:Postreplication_checkpoint","GO:0072422"],"synonyms":[{"name":"DNA damage checkpoint","type":"exact"},{"name":"DNA damage response, signal transduction resulting in cell cycle arrest","type":"narrow"},{"name":"signal transduction involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:0000077","terms_by_termid":{"GO:0000077":null,"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: GO:0006541
data:
  {"annotated_genes":["SJAG_05024","SJAG_02276","SJAG_00392","SJAG_03266","SJAG_00811","SJAG_03775","SJAG_02408","SJAG_04054","SJAG_00691","SJAG_00964","SJAG_00359","SJAG_04634","SJAG_01455","SJAG_03355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[56880,60256,62655,63672,66516,66750,67560,89621,91149,107271],"is_not":false,"summary":null,"term":"GO:0006541"},{"annotations":[113882,97712,90471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[90472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[97372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006543"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_00392":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01455":null,"SJAG_02276":null,"SJAG_02408":null,"SJAG_03266":null,"SJAG_03355":null,"SJAG_03775":null,"SJAG_04054":null,"SJAG_04634":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glutamine metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamine metabolism","type":"exact"}],"termid":"GO:0006541","terms_by_termid":{"GO:0006541":null,"GO:0006542":null,"GO:0006543":null,"GO:0019676":null}}


id: PBO:0029268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0029268"}


id: PBO:0071843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 38","termid":"PBO:0071843"}


id: PR:Q09674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0317 protein C5H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.01","synonyms":[{"name":"Spom972h-SPAC5H10.01","type":"exact"}],"termid":"PR:Q09674"}


id: FYPO:0002677
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115721,115713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115712,115716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[115706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_04551","SJAG_02592","SJAG_00610"],"single_locus_genotype_uniquenames":["sty1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta","pck2delta"],"termid":"FYPO:0002677","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null}}


id: PBO:0068619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 71, pseudogene","termid":"PBO:0068619"}


id: PBO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_localization","termid":"PBO:0031676"}


id: PBO:0067045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 65, pseudogene","termid":"PBO:0067045"}


id: PBO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 4","termid":"PBO:0072221"}


id: GO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-L-arabinonate = 2,5-dioxopentanoate + H2O.","definition_xrefs":["RHEA:17201","EC:4.2.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-L-arabinonate dehydratase activity","secondary_identifiers":["MetaCyc:4.2.1.43-RXN","KEGG_REACTION:R02278"],"synonyms":[{"name":"2-dehydro-3-deoxy-L-arabinonate hydro-lyase (2,5-dioxopentanoate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-L-arabinonate hydro-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-L-arabinonate dehydratase activity","type":"related"}],"termid":"GO:0047449"}


id: GO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin E","termid":"GO:0034695"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin E stimulus","termid":"GO:0071380"}


id: PBO:0084512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family with seven members; in S. cerevisiae, family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane and at the nuclear envelope; regulated by sterol binding; OSH2 has a paralog, SWH1, that arose from the whole genome duplication","termid":"PBO:0084512"}


id: PR:Q9HDY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.06c gene.","definition_xrefs":["UniProtKB:Q9HDY4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase PB1A10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.06c","synonyms":[{"name":"Spom972h-SPAPB1A10.06c","type":"exact"}],"termid":"PR:Q9HDY4"}


id: PBO:0068269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member k6","termid":"PBO:0068269"}


id: PATO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented transversely relative to the long axis of the bearer.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transversely striated","termid":"PATO:0002478"}


id: PBO:0079009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 3-1","termid":"PBO:0079009"}


id: PBO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A4","termid":"PBO:0044096"}


id: GO:0030139
data:
  {"annotated_genes":["SJAG_02833","SJAG_00104","SJAG_00800","SJAG_01189","SJAG_03146","SJAG_03504","SJAG_01167","SJAG_02805","SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90026,103746,106885,106985,111635],"is_not":false,"summary":null,"term":"GO:0030139"},{"annotations":[104524,107842,107783,92458],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.","definition_xrefs":["GOC:go_curators","PMID:19696797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00677":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01189":null,"SJAG_02805":null,"SJAG_02833":null,"SJAG_03146":null,"SJAG_03504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"endocytic vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1362520468"],"synonyms":[{"name":"endocytotic transport vesicle","type":"exact"},{"name":"endocytotic vesicle","type":"exact"}],"termid":"GO:0030139","terms_by_termid":{"GO:0030122":null,"GO:0030139":null}}


id: GO:0035150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that a tube is of the correct length and diameter. Tube size must be maintained not only during tube formation, but also throughout development and in some physiological processes.","definition_xrefs":["PMID:10887083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube size","termid":"GO:0035150"}


id: PR:Q9P7M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P27G11.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.11c","synonyms":[{"name":"Spom972h-SPAP27G11.11c","type":"exact"}],"termid":"PR:Q9P7M7"}


id: PBO:0044861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAP3 binding cell death enhancer 1","termid":"PBO:0044861"}


id: PBO:0054216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1596","termid":"PBO:0054216"}


id: PBO:0050264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 42","termid":"PBO:0050264"}


id: FYPO:0000857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of euchromatin is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal nucleosome positioning in euchromatin","synonyms":[{"name":"normal nucleosome occupancy in euchromatin","type":"related"},{"name":"normal nucleosome positioning in euchromatin during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning in euchromatin during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing in euchromatin","type":"exact"}],"termid":"FYPO:0000857"}


id: PBO:0030115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_processing","termid":"PBO:0030115"}


id: GO:0010284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lariciresinol + NADPH + H+ = secoisolariciresinol + NADP+.","definition_xrefs":["PMID:7592828","PMID:10066819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"lariciresinol reductase activity","secondary_identifiers":["MetaCyc:RXN-8679","MetaCyc:RXN-8684"],"termid":"GO:0010284"}


id: GO:0051144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propanediol, a sweet, colorless, viscous, hygroscopic liquid with the formula CH3-CHOH-CH2OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol catabolic process","termid":"GO:0042846"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propanediol catabolic process","synonyms":[{"name":"1,2-dihydroxypropane catabolic process","type":"exact"},{"name":"1,2-dihydroxypropane catabolism","type":"exact"},{"name":"propanediol breakdown","type":"exact"},{"name":"propanediol catabolism","type":"exact"},{"name":"propanediol degradation","type":"exact"},{"name":"propylene glycol catabolic process","type":"exact"},{"name":"propylene glycol catabolism","type":"exact"}],"termid":"GO:0051144"}


id: GO:0016268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 2 O-glycan structure, GlcNAc-beta-(1->6)[Gal-beta-(1->3)]-GalNAc.","definition_xrefs":["GOC:mah","GOC:pr","PMID:10580130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"O-glycan processing, core 2","termid":"GO:0016268"}


id: PBO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 2","termid":"PBO:0051721"}


id: GO:0008496
data:
  {"annotated_genes":["SJAG_05272","SJAG_04851","SJAG_02711","SJAG_04850","SJAG_00310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93132,98429,98438,98439,114910],"is_not":false,"summary":null,"term":"GO:0008496"}]},"cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->6)-alpha-D-mannosidic linkages in unbranched (1->6)-mannans.","definition_xrefs":["EC:3.2.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_02711":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.101-RXN","Reactome:R-HSA-6799581"],"synonyms":[{"name":"1,6-alpha-D-mannan mannanohydrolase activity","type":"related"},{"name":"1,6-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"endo-1,6-beta-mannanase activity","type":"related"},{"name":"endo-alpha-1->6-D-mannanase activity","type":"related"},{"name":"endo-alpha-D-mannosidase activity","type":"exact"},{"name":"exo-1,6-beta-mannanase activity","type":"related"},{"name":"mannan endo-1,6-beta-mannosidase activity","type":"related"}],"termid":"GO:0008496","terms_by_termid":{"GO:0008496":null}}


id: PR:Q9P7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12809:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.10c","secondary_identifiers":["UniProtKB:Q9P7Y4"],"synonyms":[{"name":"SPBC1A4.10c","type":"related"},{"name":"Spom972h-MED14","type":"exact"},{"name":"mediator complex subunit 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator of RNA polymerase II complex subunit pmc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc1","type":"related"}],"termid":"PR:Q9P7Y4"}


id: PBO:0086592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; overexpression causes a cell cycle delay or arrest; non-essential gene; YIR016W has a paralog, YOL036W, that arose from the whole genome duplication","termid":"PBO:0086592"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: PBO:0042868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 pseudogene 1","termid":"PBO:0042868"}


id: PBO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 4","termid":"PBO:0061252"}


id: GO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class Ib","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002595"}


id: PBO:0055881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 7","termid":"PBO:0055881"}


id: GO:0050142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 reduced flavodoxin + 6 H+ + N2 + n ATP = 6 oxidized flavodoxin + 2 NH3 + n ADP + n phosphate.","definition_xrefs":["MetaCyc:NITROGENASE-FLAVODOXIN-RXN","EC:1.19.6.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","termid":"GO:0016738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrogenase (flavodoxin) activity","secondary_identifiers":["RHEA:15645"],"synonyms":[{"name":"reduced flavodoxin:dinitrogen oxidoreductase (ATP-hydrolysing)","type":"related"}],"termid":"GO:0050142"}


id: GO:0098542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to other organism","secondary_identifiers":["GO:0009814"],"synonyms":[{"name":"defence response incompatible interaction","type":"narrow"},{"name":"defence response to pathogen, incompatible interaction","type":"narrow"},{"name":"defense response, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogen","type":"narrow"}],"termid":"GO:0098542"}


id: PBO:0089485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair","termid":"PBO:0089485"}


id: PBO:0031463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_lead","termid":"PBO:0031463"}


id: GO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UMP + (1,4)-alpha-D-glucosyl(n)-glucose-1-phosphate.","definition_xrefs":["PMID:21356517","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycogen synthase activity, transferring glucose-1-phosphate","secondary_identifiers":["Reactome:R-HSA-3780994","Reactome:R-HSA-3781024"],"termid":"GO:0061547"}


id: GO:0016667
data:
  {"annotated_genes":["SJAG_00419","SJAG_00614","SJAG_04046","SJAG_03653","SJAG_04399","SJAG_03290","SJAG_01199","SJAG_05027","SJAG_04060","SJAG_00822","SJAG_00489","SJAG_03992","SJAG_04539","SJAG_00288","SJAG_01417","SJAG_01693","SJAG_02489","SJAG_04125","SJAG_04953","SJAG_01292","SJAG_02016","SJAG_00365","SJAG_02599","SJAG_01647","SJAG_02495","SJAG_00196","SJAG_03414","SJAG_01038","SJAG_02827","SJAG_01162","SJAG_04632"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004148"},{"annotations":[114544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015036"},{"annotations":[93337,99381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"},{"annotations":[97796,94149,103606,110923,85635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015038"},{"annotations":[101404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[91772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[91254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016668"},{"annotations":[102791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[91773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[85011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"},{"annotations":[102979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[84863,85637,96179,107337,87111,94688,107027,99050,88517,110963,113533,97797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015035"},{"annotations":[104629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070224"},{"annotations":[97990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032542"},{"annotations":[84026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050311"},{"annotations":[84027,113637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"},{"annotations":[94689,107028,110964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016972"},{"annotations":[78325,106292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00288":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00822":null,"SJAG_01038":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01292":null,"SJAG_01417":null,"SJAG_01647":null,"SJAG_01693":null,"SJAG_02016":null,"SJAG_02489":null,"SJAG_02495":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03290":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_04060":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04539":null,"SJAG_04632":null,"SJAG_04953":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.-.-","Reactome:R-HSA-2213240"],"synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"narrow"},{"name":"oxidoreductase activity, acting on sulphur group of donors","type":"exact"}],"termid":"GO:0016667","terms_by_termid":{"GO:0004148":null,"GO:0004362":null,"GO:0004604":null,"GO:0004783":null,"GO:0004791":null,"GO:0008113":null,"GO:0015035":null,"GO:0015036":null,"GO:0015038":null,"GO:0016668":null,"GO:0016971":null,"GO:0016972":null,"GO:0032542":null,"GO:0033743":null,"GO:0036456":null,"GO:0047134":null,"GO:0050311":null,"GO:0070224":null}}


id: GO:1901683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arsenate ion from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"arsenate ion transmembrane transporter activity","termid":"GO:1901683"}


id: PR:O94399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- twf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.06","synonyms":[{"name":"Spom972h-twf1","type":"exact"}],"termid":"PR:O94399"}


id: GO:1903158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any L-glutamate transmembrane transporter activity that is involved in L-glutamate import into cell.","definition_xrefs":["GOC:dos","ISBN:0-8249-3695-6","GOC:TermGenie","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete L-glutamate transmembrane transporter activity involved in L-glutamate import into cell (obsolete GO:1903158)","synonyms":[{"name":"L-glutamate transmembrane transporter activity involved in L-glutamate import into cell","type":"exact"},{"name":"glutamate/aspartate porter activity involved in L-glutamate import into cell","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity involved in L-glutamate import into cell","type":"narrow"}],"termid":"GO:1903158"}


id: PBO:0081862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF793 antisense RNA 1 (head to head)","termid":"PBO:0081862"}


id: GO:0017171
data:
  {"annotated_genes":["SJAG_04928","SJAG_00975","SJAG_03648","SJAG_05286","SJAG_00984","SJAG_03261","SJAG_04819","SJAG_03258","SJAG_04398","SJAG_02809","SJAG_02565","SJAG_00737","SJAG_01285","SJAG_03910","SJAG_03121","SJAG_01136","SJAG_02432","SJAG_04785","SJAG_03760","SJAG_01868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89226],"is_not":false,"summary":null,"term":"GO:0017171"},{"annotations":[88021,100571,84458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[114583,97475,89472,83731,89382,100008,100014,104271,109608,105393,87809,90360,93836,99264,101018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[85371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[97476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["Wikipedia:Serine_hydrolase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03760":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017171","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null,"GO:0017171":null}}


id: PBO:0077507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 225","termid":"PBO:0077507"}


id: GO:0016056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by the excitation of rhodopsin by a photon, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:bf","GOC:hb","GOC:dph","GOC:tb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"},{"relation_name":"part_of","term_name":"phototransduction, visible light","termid":"GO:0007603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"rhodopsin mediated signaling pathway","secondary_identifiers":["GO:0009586"],"synonyms":[{"name":"rhodopsin mediated phototransduction","type":"exact"},{"name":"rhodopsin mediated signalling pathway","type":"exact"},{"name":"rhodopsin signaling","type":"exact"}],"termid":"GO:0016056"}


id: GO:0003688
data:
  {"annotated_genes":["SJAG_05239","SJAG_01267","SJAG_05301","SJAG_03927","SJAG_02348","SJAG_03451","SJAG_01762","SJAG_03216","SJAG_02394","SJAG_02800"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93526,93632,101663,104033,104243,106424,107580,107836,109377,111291],"is_not":false,"summary":null,"term":"GO:0003688"}]},"cv_name":"molecular_function","definition":"Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03216":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA replication origin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ARS binding","type":"narrow"}],"termid":"GO:0003688","terms_by_termid":{"GO:0003688":null}}


id: PBO:0049506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 13","termid":"PBO:0049506"}


id: PBO:0063850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 3","termid":"PBO:0063850"}


id: PBO:0079892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 1","termid":"PBO:0079892"}


id: PBO:0051052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-15","termid":"PBO:0051052"}


id: GO:0072698
data:
  {"annotated_genes":["SJAG_05266","SJAG_01224","SJAG_03508","SJAG_01371","SJAG_03915","SJAG_02529","SJAG_02045","SJAG_05220","SJAG_02731","SJAG_00883","SJAG_04901","SJAG_04455","SJAG_04468","SJAG_01790","SJAG_02695","SJAG_01775","SJAG_01546","SJAG_01211","SJAG_02514","SJAG_00229","SJAG_00918","SJAG_03437","SJAG_00082","SJAG_05319","SJAG_03376","SJAG_06270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89663,101214,103732,97453,106369,91845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[103421],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[93179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"},{"annotations":[93071,87500,110130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[87591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035372"},{"annotations":[86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902440"},{"annotations":[85975,94821,103694,96698,92973,113091,87197,105081,85375,106092,110284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[97124,102563],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902542"}]},"cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a location within the microtubule cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02045":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_03376":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_03915":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microtubule cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule cytoskeleton","type":"exact"}],"termid":"GO:0072698","terms_by_termid":{"GO:0035372":null,"GO:0061509":null,"GO:1902440":null,"GO:1902441":null,"GO:1902542":null,"GO:1902543":null,"GO:1904518":null,"GO:1990976":null}}


id: FYPO:0008191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at a natural  replication barrier is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal replication fork arrest","termid":"FYPO:0008191"}


id: GO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nucleolar fragmentation process that gives rise to multiple rounded structures and that occurs in conjunction with increasing age in dividing cells.","definition_xrefs":["PMID:9891807","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation involved in replicative aging (obsolete GO:0001303)","synonyms":[{"name":"nucleolar fragmentation during replicative ageing","type":"related"},{"name":"nucleolar fragmentation during replicative aging","type":"related"}],"termid":"GO:0001303"}


id: FYPO:0001972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a septated cell. Nuclear division, contractile ring formation and constriction, and septum assembly are apparently normal, but the septum does not degrade. Additional rounds of nuclear division and cytokinesis may take place, resulting in the formation of a multiseptate cell.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:12654901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in septated cell","synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in septated cell during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in septated cell","type":"exact"},{"name":"abnormal septum digestion after cytokinesis resulting in septated cell","type":"exact"}],"termid":"FYPO:0001972"}


id: PBO:0013029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf16","termid":"PBO:0013029"}


id: GO:0010765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion transport","termid":"GO:0010765"}


id: PBO:0086630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; mRNA is enriched in Scp160p-associated mRNPs; YIL161W is a non-essential gene","termid":"PBO:0086630"}


id: GO:0071024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains spliced leader (SL) RNA and associated proteins.","definition_xrefs":["ISBN:0879697393","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SL snRNP","termid":"GO:0071024"}


id: PR:Q09669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.06c","secondary_identifiers":["UniProtKB:Q09669"],"synonyms":[{"name":"Spom972h-yiaY","type":"exact"},{"name":"alcohol dehydrogenase IV (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09669"}


id: PBO:0027565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nuclear_envelope_protrusion_present_during_mitosis","termid":"PBO:0027565"}


id: GO:0002652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002652"}


id: GO:0033718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: pyranose + acceptor = 2-dehydropyranose (or 3-dehydropyranose or 2,3-didehydropyranose) + reduced acceptor, and a pyranoside + acceptor = a 3-dehydropyranoside (or 3,4-didehydropyranoside) + reduced acceptor.","definition_xrefs":["EC:1.1.99.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyranose dehydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:RXN-7966","MetaCyc:RXN-7965","MetaCyc:RXN-7962","MetaCyc:RXN-7961","MetaCyc:RXN-7963"],"synonyms":[{"name":"PDH","type":"related"},{"name":"pyranose dehydrogenase activity","type":"related"},{"name":"pyranose-quinone oxidoreductase activity","type":"related"},{"name":"pyranose:acceptor oxidoreductase activity","type":"related"},{"name":"quinone-dependent pyranose dehydrogenase activity","type":"related"}],"termid":"GO:0033718"}


id: GO:1903429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell maturation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17459944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"cell maturation","termid":"GO:0048469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell maturation","synonyms":[{"name":"regulation of functional differentiation","type":"related"}],"termid":"GO:1903429"}


id: GO:0000403
data:
  {"annotated_genes":["SJAG_03097","SJAG_05373","SJAG_01076","SJAG_02724","SJAG_04064","SJAG_04671","SJAG_01419","SJAG_04752","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77969,84804,90936,95554,96766,102259,102822,104713,112993],"is_not":false,"summary":null,"term":"GO:0000403"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment shaped like a Y. This shape occurs when DNA contains a region of paired double-stranded DNA on one end and a region of unpaired DNA strands on the opposite end.","definition_xrefs":["GOC:elh","PMID:16781730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01419":null,"SJAG_02226":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_04064":null,"SJAG_04671":null,"SJAG_04752":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"Y-form DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"forked DNA binding","type":"broad"},{"name":"splayed Y-form DNA binding","type":"exact"}],"termid":"GO:0000403","terms_by_termid":{"GO:0000403":null}}


id: PBO:0091595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, similar to region downstream of rps13","termid":"PBO:0091595"}


id: PBO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron biosynthesis protein (predicted)","termid":"PBO:0003943"}


id: PR:Q92339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght3 gene.","definition_xrefs":["UniProtKB:Q92339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity gluconate transporter ght3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.01","synonyms":[{"name":"Spom972h-ght3","type":"exact"},{"name":"hexose transporter 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92339"}


id: PBO:0066088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 2","termid":"PBO:0066088"}


id: PBO:0027010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_G2_phase","termid":"PBO:0027010"}


id: PBO:0075150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 6","termid":"PBO:0075150"}


id: PBO:0048862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 7","termid":"PBO:0048862"}


id: PBO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulatory factor Ctr1","termid":"PBO:0090733"}


id: GO:1902737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, membranous protrusion found primarily on dendritic stretches of developing neurons. May receive synaptic input, and can develop into dendritic spines.","definition_xrefs":["GOC:pad","GOC:TermGenie","PMID:24464040","Wikipedia:Dendritic_filopodia","GO_REF:0000064","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic filopodium","synonyms":[{"name":"dendrite filopodium","type":"exact"}],"termid":"GO:1902737"}


id: GO:1904677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell division.","definition_xrefs":["GOC:TermGenie","PMID:19409607","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell division","termid":"GO:1904675"},{"relation_name":"positively_regulates","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell division","synonyms":[{"name":"activation of somatic stem cell division","type":"narrow"},{"name":"activation of somatic stem cell renewal","type":"narrow"},{"name":"positive regulation of somatic stem cell renewal","type":"exact"},{"name":"up regulation of somatic stem cell division","type":"exact"},{"name":"up regulation of somatic stem cell renewal","type":"exact"},{"name":"up-regulation of somatic stem cell division","type":"exact"},{"name":"up-regulation of somatic stem cell renewal","type":"exact"},{"name":"upregulation of somatic stem cell division","type":"exact"},{"name":"upregulation of somatic stem cell renewal","type":"exact"}],"termid":"GO:1904677"}


id: PBO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 2","termid":"PBO:0060372"}


id: GO:0060528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell acquires specialized features of a secretory columnal luminar epithelial cell of the prostate.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development","termid":"GO:0060528"}


id: GO:0018025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + calmodulin L-lysine = S-adenosyl-L-homocysteine + calmodulin N6-methyl-L-lysine.","definition_xrefs":["EC:2.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0008276","GO:0003674","GO:0003824","GO:0140096","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"calmodulin-lysine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.60-RXN","RHEA:21556","Reactome:R-HSA-6786205"],"synonyms":[{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine N6-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:calmodulin (lysine) N-methyltransferase activity","type":"related"}],"termid":"GO:0018025"}


id: GO:0140750
data:
  {"annotated_genes":["SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109496],"is_not":false,"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"A histone octamer slider activity that spaces nucleosomes along chromosomal DNA. This activity is involved in assembling chromatin in uniform nucleosome arrays to regulate transcription by RNA polymerases I, II, and III, as well as DNA replication, recombination and repair.","definition_xrefs":["PMID:16468993","PMID:11683384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone octamer slider activity","termid":"GO:0140751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nucleosome array spacer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleosome array spacing activity","type":"exact"}],"termid":"GO:0140750","terms_by_termid":{"GO:0140750":null}}


id: PBO:0061979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AS member 2 pseudogene","termid":"PBO:0061979"}


id: PBO:0074680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63B","termid":"PBO:0074680"}


id: PBO:0043355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRN1 antisense RNA 1","termid":"PBO:0043355"}


id: FYPO:0006238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromere","synonyms":[{"name":"decreased protein localisation to centromere","type":"exact"},{"name":"decreased protein localisation to chromosome, centromeric region","type":"exact"},{"name":"decreased protein localization to chromosome, centric region","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric region","type":"exact"},{"name":"reduced protein localization to centromere","type":"exact"}],"termid":"FYPO:0006238"}


id: FYPO:0004927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore formation assembly is normal (i.e. indistinguishable from wild type). In prospore formation, the nascent membrane forms at the meiotic outer plaque and grows until closure occurs and forespores, or prospores, are formed.","definition_xrefs":["GO:0032120","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal prospore membrane formation","synonyms":[{"name":"normal ascospore-type prospore membrane assembly","type":"exact"},{"name":"normal forespore membrane formation","type":"exact"}],"termid":"FYPO:0004927"}


id: GO:0010346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a shoot axis. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot axis formation","synonyms":[{"name":"shoot formation","type":"related"}],"termid":"GO:0010346"}


id: PBO:0041027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'), 5'-bisphosphate nucleotidase 2","termid":"PBO:0041027"}


id: GO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the chlamydospore over time, from its formation to the mature structure. A chlamydospores is a mitotic (asexual) one-celled spore, produced primarily for survival, not dispersal, originating endogenously and singly within part of a pre-existing cell and possessing an inner secondary and often thickened cell wall. An example of this is found in Candida albicans.","definition_xrefs":["PMID:14663094","ISBN:085199377X","GOC:mcc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlamydospore formation","secondary_identifiers":["GO:0055027"],"synonyms":[{"name":"chlamydospore development","type":"exact"}],"termid":"GO:0001410"}


id: GO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0008092"],"is_obsolete":false,"name":"myosin II binding","termid":"GO:0045159"}


id: PBO:0017776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab8","termid":"PBO:0017776"}


id: GO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a paraxial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"paraxial mesoderm formation","termid":"GO:0048341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell differentiation","termid":"GO:0048342"}


id: SO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a pyrrolysine anticodon, and a 3' pyrrolysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"pyrrolysine_tRNA_primary_transcript","termid":"SO:0001178"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysyl_tRNA","synonyms":[{"name":"pyrrolysyl tRNA","type":"exact"},{"name":"pyrrolysyl-transfer RNA","type":"exact"},{"name":"pyrrolysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000766"}


id: FYPO:0003951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003951)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"increased tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003951"}


id: FYPO:0006342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more microtubules occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"decreased microtubule binding","synonyms":[{"name":"reduced microtubule binding","type":"exact"}],"termid":"FYPO:0006342"}


id: PBO:0048844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-6-phosphate deaminase 2","termid":"PBO:0048844"}


id: PBO:0028362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_in_stationary_phase","termid":"PBO:0028362"}


id: GO:0044143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of development of symbiont on or near host surface (obsolete GO:0044143)","termid":"GO:0044143"}


id: PBO:0085357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheine:protein transferase (PPTase); activates mitochondrial acyl carrier protein (Acp1p) by phosphopantetheinylation","termid":"PBO:0085357"}


id: PBO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_with_normal_morphology","termid":"PBO:0030792"}


id: GO:0031724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR5 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CXCR5 chemokine receptor binding","synonyms":[{"name":"CXCR5 chemokine receptor ligand","type":"narrow"},{"name":"type 1 Burkitt's lymphoma receptor binding","type":"exact"}],"termid":"GO:0031724"}


id: PBO:0087678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; termed subunit I or subunit j; does not correspond to known ATP synthase subunits in other organisms","termid":"PBO:0087678"}


id: PBO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_organization","termid":"PBO:0031034"}


id: PBO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_endoparasite","termid":"PBO:0034296"}


id: GO:0050141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitroethane + H2O + O2 = acetaldehyde + nitrite + H2O2.","definition_xrefs":["MetaCyc:NITROETHANE-OXIDASE-RXN","EC:1.7.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitroalkane oxidase activity","termid":"GO:0052664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitroethane oxidase activity","synonyms":[{"name":"nitroethane reductase activity","type":"related"},{"name":"nitroethane:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050141"}


id: PBO:0072946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 26B","termid":"PBO:0072946"}


id: GO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity via signaling pathways and mediated by adaptor proteins.","definition_xrefs":["PMID:15062641","PMID:18613828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor activity","termid":"GO:0004908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-1, type I, activating receptor activity","secondary_identifiers":["GO:0019967"],"synonyms":[{"name":"IL-1 type I, activating binding","type":"exact"},{"name":"IL-1 type I, activating receptor","type":"exact"},{"name":"interleukin-1 activating receptor activity","type":"exact"},{"name":"interleukin-1 type I receptor activity","type":"exact"},{"name":"interleukin-1, type I, activating binding","type":"related"}],"termid":"GO:0004909"}


id: GO:0044486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the transmission of a nerve impulse in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of transmission of nerve impulse in another organism","synonyms":[{"name":"modulation of conduction of nerve impulse in other organism","type":"exact"},{"name":"modulation of transmission of nerve impulse in other organism","type":"exact"},{"name":"regulation of transmission of nerve impulse in other organism","type":"exact"}],"termid":"GO:0044486"}


id: PBO:0041842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 22","termid":"PBO:0041842"}


id: GO:0170053
data:
  {"annotated_genes":["SJAG_04682","SJAG_01076","SJAG_05212","SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140656"},{"annotations":[85928,101096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[88505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a nuclease.","definition_xrefs":["PMID:24736845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_01076":null,"SJAG_04682":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"nuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170053","terms_by_termid":{"GO:0044692":null,"GO:0061632":null,"GO:0140656":null}}


id: GO:0141156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic AMP (cAMP) by adenylate cyclase (either transmembrane or soluble), which activates protein kinase A, and ends with activation of downstream effectors such as the transcription factor CREB that further transmit the signal within the cell.","definition_xrefs":["PMID:23209152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cAMP/PKA signal transduction","synonyms":[{"name":"PKA signaling","type":"broad"},{"name":"cAMP signaling","type":"broad"},{"name":"cAMP/PKA signaling cassette","type":"exact"},{"name":"protein kinase A signaling","type":"broad"}],"termid":"GO:0141156"}


id: FYPO:0004298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide 5'-phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"}


id: PBO:0066878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 178","termid":"PBO:0066878"}


id: PBO:0066402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 4","termid":"PBO:0066402"}


id: PBO:0084621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-R-sulfoxide reductase; involved in the response to oxidative stress; protects iron-sulfur clusters from oxidative inactivation along with MXR1; involved in the regulation of lifespan","termid":"PBO:0084621"}


id: PBO:0050058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Y (pseudogene)","termid":"PBO:0050058"}


id: GO:0097691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small membrane vesicle (< 1 um) that buds off a prokaryotic cell plasma membrane, able to carry proteins, phospholipids, lipopolysaccharides, nucleic acids, viruses, and more. Important in intercellular communication and pathogenesis; can exist within host cells.","definition_xrefs":["PMID:25704309","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"bacterial extracellular vesicle","termid":"GO:0097691"}


id: PBO:0056274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAN1B1 divergent transcript","termid":"PBO:0056274"}


id: PBO:0092027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit 8","termid":"PBO:0092027"}


id: FYPO:0007603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microfilament motor activity","termid":"FYPO:0006093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased microfilament motor activity","synonyms":[{"name":"decreased actin filament motor activity","type":"exact"},{"name":"decreased microfilament motor (ATPase) activity","type":"exact"},{"name":"decreased myosin ATPase activity","type":"related"},{"name":"reduced microfilament motor activity","type":"exact"}],"termid":"FYPO:0007603"}


id: GO:0009348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A homotrimeric protein complex that catalyzes the transfer of a carbamoyl group to ornithine, forming citrulline.","definition_xrefs":["GOC:mah","EC:2.1.3.3"],"gene_count":0,"genotype_count":0,"name":"obsolete ornithine carbamoyltransferase complex (obsolete GO:0009348)","termid":"GO:0009348"}


id: GO:0032243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"negatively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleoside transport","synonyms":[{"name":"down regulation of nucleoside transport","type":"exact"},{"name":"down-regulation of nucleoside transport","type":"exact"},{"name":"downregulation of nucleoside transport","type":"exact"},{"name":"inhibition of nucleoside transport","type":"narrow"}],"termid":"GO:0032243"}


id: PBO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma2","termid":"PBO:0048209"}


id: FYPO:0006374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal proteolysis","termid":"FYPO:0005376"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein processing","synonyms":[{"name":"abnormal protein cleavage","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis","type":"exact"}],"termid":"FYPO:0006374"}


id: PBO:0057699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1287","termid":"PBO:0057699"}


id: GO:1990648
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104494],"is_not":false,"summary":null,"term":"GO:1990648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5,6-trisphosphate + H2O = 1D-myo-inositol 4,6-bisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-4,5,6-triphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990648","terms_by_termid":{"GO:1990648":null}}


id: GO:0034207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an acetyl group to a steroid molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid acetylation (obsolete GO:0034207)","termid":"GO:0034207"}


id: GO:0046958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A simple form of learning whereby the repeated presence of a stimulus leads to a change in the probability or strength of the response to that stimulus. There is no association of one type of stimulus with another, rather it is a generalized response to the environment.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonassociative learning","synonyms":[{"name":"unconditional response","type":"exact"}],"termid":"GO:0046958"}


id: PBO:0045644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 2","termid":"PBO:0045644"}


id: PBO:0038983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 1D","termid":"PBO:0038983"}


id: GO:0097080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic selenite (HSeO3-1 at physiological pH) across a plasma membrane.","definition_xrefs":["PMID:20861301","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"plasma membrane selenite transport","synonyms":[{"name":"plasma membrane hydrogenselenite transport","type":"exact"}],"termid":"GO:0097080"}


id: FYPO:0006344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the plasma membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to plasma membrane during vegetative growth","synonyms":[{"name":"ectopic protein localization to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalised to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006344"}


id: PBO:0056818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 11","termid":"PBO:0056818"}


id: GO:0090175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of planar polarity, the coordinated organization of groups of cells in a tissue, such that they all orient to similar coordinates.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of planar polarity","termid":"GO:0090175"}


id: PBO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"after human WDR21","termid":"PBO:0000291"}


id: PBO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 17","termid":"PBO:0070885"}


id: PBO:0066674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ interacting and tubulin associated 1","termid":"PBO:0066674"}


id: PBO:0080925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 3","termid":"PBO:0080925"}


id: PBO:0068026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 331","termid":"PBO:0068026"}


id: GO:0140311
data:
  {"annotated_genes":["SJAG_00822","SJAG_02474","SJAG_02266","SJAG_04873","SJAG_00145","SJAG_02576","SJAG_00642","SJAG_00436","SJAG_02857"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83887,86443,91362,91425,96665,96717,101177,103607,107912],"is_not":false,"summary":null,"term":"GO:0140311"}]},"cv_name":"molecular_function","definition":"Binding to a protein to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:1493333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"protein sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140311","terms_by_termid":{"GO:0140311":null}}


id: GO:1903374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of a subarachnoid space over time, from its formation to the mature structure.","definition_xrefs":["Wikipedia:Subarachnoid_space","GO_REF:0000094","GOC:TermGenie","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete subarachnoid space development (obsolete GO:1903374)","synonyms":[{"name":"cavitas subarachnoidea development","type":"related"},{"name":"cavum subarachnoideale development","type":"related"},{"name":"spatium leptomeningeum development","type":"related"},{"name":"spatium subarachnoideum development","type":"related"},{"name":"subarachnoid cavity development","type":"related"}],"termid":"GO:1903374"}


id: PBO:0038539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 14A","termid":"PBO:0038539"}


id: GO:1990745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A quatrefoil tethering complex required for endocytic recycling.","definition_xrefs":["PMID:25799061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"EARP complex","termid":"GO:1990745"}


id: PBO:0064387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 9","termid":"PBO:0064387"}


id: GO:1990863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of acinar cells, resulting in the expansion of a cell population. An acinar cell is a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini (singular acinus).","definition_xrefs":["PMID:9788538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell proliferation","synonyms":[{"name":"acinic cell proliferation","type":"exact"},{"name":"acinous cell proliferation","type":"exact"}],"termid":"GO:1990863"}


id: GO:0055088
data:
  {"annotated_genes":["SJAG_01912","SJAG_04323","SJAG_02064","SJAG_01422","SJAG_04550","SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86385,95920,96776],"is_not":false,"summary":null,"term":"GO:0055088"},{"annotations":[98342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090156"},{"annotations":[99705,89237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055091"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of lipid within an organism or cell.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01912":null,"SJAG_02064":null,"SJAG_04317":null,"SJAG_04323":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055088","terms_by_termid":{"GO:0055088":null,"GO:0055091":null,"GO:0090156":null}}


id: FYPO:0007531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is decreased at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","termid":"FYPO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007531"}


id: GO:0015141
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97847],"is_not":false,"summary":null,"term":"GO:0015141"},{"annotations":[97848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of succinate, the dianion of ethane dicarboxylic acid, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"succinate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015141","terms_by_termid":{"GO:0015141":null,"GO:0097434":null}}


id: PATO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that exists by virtue of being a particular point in the time of a cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phase","termid":"PATO:0000083"}


id: PBO:0055130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2549","termid":"PBO:0055130"}


id: GO:0033938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6) linkages between alpha-L-fucose and N-acetyl-D-glucosamine in glycopeptides such as immunoglobulin G glycopeptide and fucosyl-asialo-agalacto-fetuin.","definition_xrefs":["EC:3.2.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-L-fucosidase activity","termid":"GO:0004560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"1,6-alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.127-RXN"],"synonyms":[{"name":"1,6-L-fucosyl-N-acetyl-D-glucosaminylglycopeptide fucohydrolase activity","type":"related"}],"termid":"GO:0033938"}


id: PBO:0064754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 90","termid":"PBO:0064754"}


id: PBO:0056041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene C4 synthase","termid":"PBO:0056041"}


id: GO:0019074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The packaging of viral RNA (single-stranded or double-stranded) into a nucleocapsid.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome packaging","termid":"GO:0019072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome packaging","termid":"GO:0019074"}


id: PBO:0050502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 2","termid":"PBO:0050502"}


id: GO:1902919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(5-hydroxyvalerate).","definition_xrefs":["PMID:21705209","GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(5-hydroxyvalerate) metabolic process","termid":"GO:1902918"},{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(5-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(5-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(5-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(5-hydroxyvalerate) formation","type":"exact"},{"name":"poly(5-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902919"}


id: MOD:01707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with an isotope tagged reagent acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}


id: GO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a monooxygenase reaction in which oxygen is incorporated into limonene.","definition_xrefs":["PMID:820855","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"limonene monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0019113"}


id: PATO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's consisting of blebbing of the nucleus and DNA fragmentation due to the cell undergoing a specific form of programmed cell death termed apoptosis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic","secondary_identifiers":["GO:0006915"],"termid":"PATO:0000638"}


id: GO:0120132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:27908889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of apoptotic process in bone marrow cell","termid":"GO:0071865"},{"relation_name":"positively_regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"activation of apoptosis in bone marrow","type":"narrow"},{"name":"positive regulation of apoptosis in bone marrow","type":"narrow"},{"name":"positive regulation of apoptotic process in bone marrow","type":"exact"},{"name":"positive regulation of bone marrow cell apoptosis","type":"exact"},{"name":"positive regulation of bone marrow cell programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of killing of bone marrow cells","type":"exact"},{"name":"positive regulation of programmed cell death of bone marrow cells by apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death, bone marrow cells","type":"exact"},{"name":"up regulation of apoptosis in bone marrow","type":"exact"},{"name":"up-regulation of apoptosis in bone marrow","type":"exact"},{"name":"upregulation of apoptosis in bone marrow","type":"exact"}],"termid":"GO:0120132"}


id: PBO:0073842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC8A1 antisense RNA 1","termid":"PBO:0073842"}


id: GO:0099116
data:
  {"annotated_genes":["SJAG_04582","SJAG_00955","SJAG_03796","SJAG_01623","SJAG_00195","SJAG_06613","SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60528,113950],"is_not":false,"summary":null,"term":"GO:0099116"},{"annotations":[90906,109686,100739,95670,94677,114734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001682"}]},"cv_name":"biological_process","definition":"The process in which the 5' end of a pre-tRNA molecule is converted to that of a mature tRNA.","definition_xrefs":["GOC:dos","PMID:27484477","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"},{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00955":null,"SJAG_01623":null,"SJAG_03796":null,"SJAG_04233":null,"SJAG_04582":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA 5'-end processing","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"tRNA 5' processing","type":"exact"}],"termid":"GO:0099116","terms_by_termid":{"GO:0001682":null,"GO:0099116":null}}


id: PBO:0035831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035831"}


id: SO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is able to excise itself and rejoin the remaining portions with a peptide bond.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intein","secondary_identifiers":["http://en.wikipedia.org/wiki/Intein"],"synonyms":[{"name":"protein intron","type":"related"}],"termid":"SO:0000728"}


id: FYPO:0001263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched and septated, and longer than normal, during a cellular hyperosmotic response.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete branched, elongated cell during cellular hyperosmotic response (obsolete FYPO:0001263)","synonyms":[{"name":"branched, elongated cell during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"branched, elongated, septated cell during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001263"}


id: PBO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine","termid":"PBO:0000769"}


id: PBO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase (predicted)","termid":"PBO:0002007"}


id: GO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptin stimulus. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body. It plays a key role in regulating energy intake and energy expenditure, including appetite and metabolism.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to leptin","termid":"GO:0044321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptin stimulus","termid":"GO:0044320"}


id: PBO:0064833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10 pseudogene 1","termid":"PBO:0064833"}


id: GO:0140661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a motor protein.","definition_xrefs":["PMID:23142046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor regulator activity","termid":"GO:0140659"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"cytoskeletal motor inhibitor activity","synonyms":[{"name":"motor activity inhibitor activity","type":"broad"}],"termid":"GO:0140661"}


id: PBO:0060082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 29","termid":"PBO:0060082"}


id: PBO:0060643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 2","termid":"PBO:0060643"}


id: GO:0000027
data:
  {"annotated_genes":["SJAG_04395","SJAG_03080","SJAG_02840","SJAG_01161","SJAG_04847","SJAG_04176","SJAG_00722","SJAG_02508","SJAG_04492","SJAG_01568","SJAG_05679","SJAG_04180","SJAG_04066","SJAG_01839","SJAG_01606","SJAG_04108","SJAG_02952","SJAG_00949","SJAG_01339","SJAG_01122","SJAG_01420","SJAG_00841","SJAG_03666","SJAG_03458","SJAG_02535","SJAG_02436","SJAG_03012","SJAG_01811","SJAG_04669","SJAG_02868","SJAG_04992","SJAG_04599","SJAG_00882","SJAG_02759","SJAG_02427","SJAG_02830","SJAG_03496","SJAG_04304","SJAG_00323","SJAG_03466","SJAG_01454","SJAG_04004","SJAG_04940","SJAG_03773","SJAG_00689","SJAG_05248","SJAG_02754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89566,93676,93677,97389,98666,98667,99863,101734,111823,111890,113922,114328],"is_not":false,"summary":null,"term":"GO:0000027"},{"annotations":[102182,111949,94174,98703,111948,115032,88593,89012,112832,99696,107632,89404,85853,95365,107005,109093,112345,108336,103624,96913,96584,105206,96769],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[98087,106934,83904,100467,111531,91032,98088,94175,100240,106935,111530,93266,112756,98704,100987,95639,101393,88299,100318,112755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180023"},{"annotations":[104576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902775"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.","definition_xrefs":["GOC:jl","PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosome assembly","termid":"GO:0042255"},{"relation_name":"part_of","term_name":"ribosomal large subunit biogenesis","termid":"GO:0042273"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00323":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03666":null,"SJAG_03773":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"ribosomal large subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"50S ribosomal subunit assembly","type":"narrow"},{"name":"60S ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0000027","terms_by_termid":{"GO:0000027":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: PBO:0075476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 3","termid":"PBO:0075476"}


id: PBO:0018276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4 (predicted)","termid":"PBO:0018276"}


id: GO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein phosphorylation","synonyms":[{"name":"regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001932"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[57298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035445"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0035445":null,"GO:0140159":null}}


id: PBO:0048358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 69","termid":"PBO:0048358"}


id: PBO:0063726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 1","termid":"PBO:0063726"}


id: FYPO:0007216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is abolished  during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin at MCB promoters","termid":"FYPO:0005460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein localisation to chromatin at MCB promoters during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at MCB promoters during cellular response to HU","type":"exact"},{"name":"abolished protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at MCB target genes during cellular response to hydroxyurea","type":"related"},{"name":"abolished protein localization to chromatin at MCB-containing promoters during cellular response to hydroxyurea","type":"exact"},{"name":"protein localization to chromatin at MCB promoters during vegetative growth abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007216"}


id: GO:0102313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) + H2O = 1,8-cineole + diphosphoric acid.","definition_xrefs":["RHEA:32543","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,8-cineole synthase activity","secondary_identifiers":["EC:4.2.3.108","MetaCyc:RXN-12980"],"termid":"GO:0102313"}


id: PBO:0040131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 16","termid":"PBO:0040131"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: PBO:0068007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 309","termid":"PBO:0068007"}


id: PBO:0003531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tspO homolog/ peripheral benzodiazepine receptor homolog, involved in the transport cytoplas/mitochondrial of haem (predicted)","termid":"PBO:0003531"}


id: GO:1990235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of diamine N-acetyltransferase activity.","definition_xrefs":["PMID:8077207","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase complex","termid":"GO:1902493"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"diamine N-acetyltransferase complex","synonyms":[{"name":"SAT complex","type":"narrow"},{"name":"SAT tetramer","type":"narrow"},{"name":"spermidine acetyltransferase complex","type":"narrow"}],"termid":"GO:1990235"}


id: GO:1905189
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["PMID:21389117","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905189","terms_by_termid":{"GO:1905191":null}}


id: PBO:0087646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences contributing to both complex assembly and DNA binding","termid":"PBO:0087646"}


id: GO:0004370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycerol = sn-glycerol 3-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:21644","EC:2.7.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycerol kinase activity","secondary_identifiers":["KEGG_REACTION:R00847","MetaCyc:GLYCEROL-KIN-RXN","Reactome:R-HSA-75887"],"synonyms":[{"name":"ATP:glycerol 3-phosphotransferase activity","type":"related"},{"name":"ATP:glycerol-3-phosphotransferase activity","type":"related"},{"name":"GK","type":"related"},{"name":"glyceric kinase activity","type":"related"},{"name":"glycerokinase activity","type":"related"},{"name":"glycerol kinase (phosphorylating)","type":"related"}],"termid":"GO:0004370"}


id: PBO:0109815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly factor Nas2","termid":"PBO:0109815"}


id: PBO:0045073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 5","termid":"PBO:0045073"}


id: GO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oleic acid, the 18-carbon monounsaturated fatty acid (9Z)-octadec-9-enoic acid.","definition_xrefs":["GOC:lp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"oleic acid binding","termid":"GO:0070538"}


id: GO:0052592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.17.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0052592"}


id: PBO:0044672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopa decarboxylase","termid":"PBO:0044672"}


id: PBO:0059269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L33","termid":"PBO:0059269"}


id: PBO:0034243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_functional_equivalence_relationship_with","termid":"PBO:0034243"}


id: GO:0008830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-L-mannose.","definition_xrefs":["EC:5.1.3.13","RHEA:16969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dTDP-4-dehydrorhamnose 3,5-epimerase activity","secondary_identifiers":["KEGG_REACTION:R06514","MetaCyc:DTDPDEHYDRHAMEPIM-RXN"],"synonyms":[{"name":"TDP-4-keto-L-rhamnose-3,5-epimerase activity","type":"related"},{"name":"TDP-4-ketorhamnose 3,5-epimerase activity","type":"related"},{"name":"dTDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase activity","type":"related"},{"name":"dTDP-4-keto-6-deoxyglucose 3,5-epimerase activity","type":"related"},{"name":"thymidine diphospho-4-ketorhamnose 3,5-epimerase activity","type":"related"}],"termid":"GO:0008830"}


id: PBO:0089816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Ppk26","termid":"PBO:0089816"}


id: PBO:0046536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 9 member 1","termid":"PBO:0046536"}


id: PBO:0030689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_M-factor","termid":"PBO:0030689"}


id: GO:0018706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2,3,5-tetrahydroxybenzene + 1,2,3-trihydroxybenzene = 1,3,5-trihydroxybenzene + 1,2,3,5-tetrahydroxybenzene.","definition_xrefs":["EC:1.97.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyrogallol hydroxytransferase activity","secondary_identifiers":["UM-BBD_reactionID:r0006","MetaCyc:1.97.1.2-RXN","RHEA:21000"],"synonyms":[{"name":"1,2,3,5-tetrahydroxybenzene hydroxyltransferase activity","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene-pyrogallol hydroxyltransferase (transhydroxylase)","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene:1,2,3-trihydroxybenzene hydroxyltransferase activity","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene:1,2,3-trihydroxybenzene hydroxytransferase activity","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene:pyrogallol transhydroxylase activity","type":"related"},{"name":"pyrogallol hydroxyltransferase activity","type":"exact"},{"name":"transhydroxylase activity","type":"related"}],"termid":"GO:0018706"}


id: PR:Q9Y7T1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tap42 gene.","definition_xrefs":["UniProtKB:Q9Y7T1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C63.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.05","synonyms":[{"name":"Spom972h-tap42","type":"exact"}],"termid":"PR:Q9Y7T1"}


id: GO:0070826
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic protein complex that contains integrin, mobilferrin and a flavin monooxygenase, is capable of reducing Fe(III) to Fe(II) utilizing NADPH, and is involved in iron transport. Fe(II) is required in the cell as the substrate for ferrochelatase in the synthesis of heme.","definition_xrefs":["GOC:rph","PMID:8639593","GOC:mah","PMID:11842004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"paraferritin complex","termid":"GO:0070826"}


id: GO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of putrescine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine acetylation","termid":"GO:0032920"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: GO:0031701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an angiotensin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"angiotensin receptor binding","synonyms":[{"name":"angiotensin receptor ligand","type":"narrow"}],"termid":"GO:0031701"}


id: PBO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_diglyceride_level","termid":"PBO:0034437"}


id: SO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A beta strand describes a single length of polypeptide chain that forms part of a beta sheet. A single continuous stretch of amino acids adopting an extended conformation of hydrogen bonds between the N-O and the C=O of another part of the peptide. This forms a secondary protein structure in which two or more extended polypeptide regions are hydrogen-bonded to one another in a planar array.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_strand","secondary_identifiers":["BS:00042","http://en.wikipedia.org/wiki/Beta_sheet"],"synonyms":[{"name":"strand","type":"related"}],"termid":"SO:0001111"}


id: PBO:0074530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA D","termid":"PBO:0074530"}


id: PBO:0001032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk4/ sensor for unfolded proteins in the ER (predicted)","termid":"PBO:0001032"}


id: GO:0061921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propionylation of peptidyl-lysine.","definition_xrefs":["PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine propionylation","termid":"GO:0061921"}


id: PBO:0044462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 61, pseudogene","termid":"PBO:0044462"}


id: PBO:0005442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase (predicted)","termid":"PBO:0005442"}


id: GO:1905700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GO_REF:0000058","PMID:15198509","GOC:TermGenie","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1905699"},{"relation_name":"is_a","term_name":"negative regulation of response to drug","termid":"GO:2001024"},{"relation_name":"negatively_regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"down regulation of drug transmembrane export","type":"narrow"},{"name":"down-regulation of drug transmembrane export","type":"narrow"},{"name":"downregulation of drug transmembrane export","type":"narrow"},{"name":"inhibition of drug transmembrane export","type":"narrow"},{"name":"negative regulation of drug transmembrane export","type":"narrow"},{"name":"negative regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905700"}


id: PBO:0079087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 4-1","termid":"PBO:0079087"}


id: GO:0098847
data:
  {"annotated_genes":["SJAG_04863","SJAG_02362","SJAG_02194","SJAG_05214","SJAG_00939","SJAG_04245","SJAG_03855","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[92268,85414,107725,104314,110794,91294,107750,106569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA of a specific nucleotide composition.","definition_xrefs":["PMID:9531483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA binding","termid":"GO:0003697"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04863":null,"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sequence-specific single stranded DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098847","terms_by_termid":{"GO:0043047":null,"GO:0098505":null}}


id: GO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription factor TFIIH holo complex.","definition_xrefs":["PMID:11259578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex binding","termid":"GO:0062058"}


id: PBO:0036094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_mitotic_S_phase","termid":"PBO:0036094"}


id: PBO:0078241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 21/OR9-2 (pseudogene)","termid":"PBO:0078241"}


id: GO:0035733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a hepatic stellate cell resulting from exposure to a cytokine, chemokine, hormone, cellular ligand or soluble factor.","definition_xrefs":["GOC:bf","CL:0000632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast activation","termid":"GO:0072537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell activation","termid":"GO:0035733"}


id: FYPO:0007826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to leucine starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:33534698","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during cellular response to amino acid starvation","termid":"FYPO:0007825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to leucine starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to leucine starvation","type":"related"},{"name":"decreased protein level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007826"}


id: PR:Q10132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isopentenyl-diphosphate Delta-isomerase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02441","PANTHER:PTHR10885:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate Delta-isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.15","secondary_identifiers":["UniProtKB:Q10132"],"synonyms":[{"name":"IPP isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IDI1","type":"exact"},{"name":"isopentenyl pyrophosphate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10132"}


id: GO:2001297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N(omega)-methyl-L-arginine.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"N(omega)-methyl-L-arginine metabolic process","termid":"GO:2001296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"N(omega)-methyl-L-arginine catabolic process","synonyms":[{"name":"N(omega)-methyl-L-arginine breakdown","type":"exact"},{"name":"N(omega)-methyl-L-arginine catabolism","type":"exact"},{"name":"N(omega)-methyl-L-arginine degradation","type":"exact"}],"termid":"GO:2001297"}


id: GO:0046487
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97210,101266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyoxylate, the anion of glyoxylic acid, HOC-COOH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glyoxylate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glyoxylate metabolism","type":"exact"}],"termid":"GO:0046487","terms_by_termid":{"GO:0009436":null}}


id: PATO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure.","definition_xrefs":["PATOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendritic","synonyms":[{"name":"dendriform","type":"exact"},{"name":"dendroid","type":"exact"},{"name":"dendroidal","type":"exact"}],"termid":"PATO:0002045"}


id: PBO:0086185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine kinase; essential for cell wall remodeling during growth; localized to sites of polarized growth and the mother-daughter bud neck; homolog of the alpha, beta, and gamma isoforms of mammalian protein kinase C (PKC)","termid":"PBO:0086185"}


id: SO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Ngaro retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR. RT is a reverse transcriptase. RH is RNAse H. YR is Tyrosine recombinase. Inverted terminal repeats (ITRs) in Ngaro are arranged in A-pol-B-A-B order where A and B represent ITRs.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ngaro_YR_retrotransposon","synonyms":[{"name":"Ngaro YR retrotransposon","type":"exact"},{"name":"Ngaro retrotransposon","type":"exact"},{"name":"RYN retrotransposon","type":"exact"}],"termid":"SO:0002288"}


id: GO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of mesenchymal tissue that contributes to the formation of a limb bud.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme migration","termid":"GO:0090131"},{"relation_name":"part_of","term_name":"limb bud formation","termid":"GO:0060174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}


id: PBO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 21","termid":"PBO:0052729"}


id: PR:O74690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu13 gene.","definition_xrefs":["UniProtKB:O74690","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"13 kDa ribonucleoprotein-associated protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.03c","synonyms":[{"name":"Spom972h-snu13","type":"exact"}],"termid":"PR:O74690"}


id: PBO:0031846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031846"}


id: PBO:0052546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor A1, pseudogene","termid":"PBO:0052546"}


id: PR:O43081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC947.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C947.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.06c","synonyms":[{"name":"Spom972h-SPBC947.06c","type":"exact"}],"termid":"PR:O43081"}


id: PBO:0055744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1B divergent transcript","termid":"PBO:0055744"}


id: GO:0004098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cerebroside 3-sulfate + H2O = a cerebroside + sulfate.","definition_xrefs":["EC:3.1.6.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cerebroside-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-1606807","Reactome:R-HSA-9840949","MetaCyc:CEREBROSIDE-SULFATASE-RXN","RHEA:21300"],"synonyms":[{"name":"arylsulfatase A activity","type":"related"},{"name":"cerebroside sulfate sulfatase activity","type":"related"},{"name":"cerebroside-3-sulfate 3-sulfohydrolase activity","type":"related"},{"name":"cerebroside-sulphatase activity","type":"exact"}],"termid":"GO:0004098"}


id: GO:1904954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["PMID:22988876","GOC:bf","GO_REF:0000060","GOC:TermGenie","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904954)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"}],"termid":"GO:1904954"}


id: PBO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase Sod1","termid":"PBO:0000718"}


id: PBO:0091542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho842","termid":"PBO:0091542"}


id: PBO:0056325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K7 C-terminal like","termid":"PBO:0056325"}


id: PBO:0071773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 1","termid":"PBO:0071773"}


id: PBO:0029792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_actin_cortical_patch","termid":"PBO:0029792"}


id: GO:0030961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-arginine to form peptidyl-hydroxyarginine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine hydroxylation","termid":"GO:0030961"}


id: PBO:0111870
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin","termid":"PBO:0111870"}


id: PBO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone Rot1 (predicted)","termid":"PBO:0001821"}


id: PBO:0060147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mtr4 exosome RNA helicase","termid":"PBO:0060147"}


id: PBO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 5","termid":"PBO:0047478"}


id: GO:1901512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-microperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(-)-microperfuranone metabolic process","termid":"GO:1901510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone biosynthetic process","synonyms":[{"name":"(-)-microperfuranone anabolism","type":"exact"},{"name":"(-)-microperfuranone biosynthesis","type":"exact"},{"name":"(-)-microperfuranone formation","type":"exact"},{"name":"(-)-microperfuranone synthesis","type":"exact"}],"termid":"GO:1901512"}


id: PBO:0089457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein Qtr3-like","termid":"PBO:0089457"}


id: SO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that is depleted of nucleosomes and accessible to DNA-binding proteins including transcription factors and nucleases.","definition_xrefs":["SO:ds","PMID:25903461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"overlaps","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accessible_DNA_region","synonyms":[{"name":"accessible DNA region","type":"exact"}],"termid":"SO:0002331"}


id: PBO:0068890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 131, pseudogene","termid":"PBO:0068890"}


id: PR:P21565
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle 54 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04701","PANTHER:PTHR11564:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 54 kDa protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.06c","secondary_identifiers":["UniProtKB:P21565"],"synonyms":[{"name":"SRP54 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRP54","type":"exact"}],"termid":"PR:P21565"}


id: FYECO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were cold shocked followed by recovery at a temperature range higher than normal for standard pombe growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock and recovery at high temperature","termid":"FYECO:0000323"}


id: GO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"is_a","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall organization","synonyms":[{"name":"cell wall organization and biogenesis","type":"narrow"},{"name":"cellulose and pectin-containing cell wall organization and biogenesis","type":"related"},{"name":"plant-type cell wall organisation","type":"exact"},{"name":"plant-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0009664"}


id: PBO:0055948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 57","termid":"PBO:0055948"}


id: MOD:00424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-pyridylethyl-L-cysteine.","definition_xrefs":["PubMed:11760118","PubMed:626389","PubMed:8783016","Unimod:31#C","PubMed:8297018","OMSSA:112","DeltaMass:253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-pyridylethyl-L-cysteine","synonyms":[{"name":"PECys","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-pyridinylethyl-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"},{"name":"spyridylethylc","type":"exact"},{"name":"vinylpyridine derivatized cysteine residue","type":"exact"}],"termid":"MOD:00424"}


id: GO:0051502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diterpene phytoalexins, terpenoids with 20 carbons produced by plants in response to environmental stresses.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"diterpene phytoalexin metabolic process","termid":"GO:0051501"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"diterpene phytoalexin biosynthetic process","synonyms":[{"name":"diterpene phytoalexin anabolism","type":"exact"},{"name":"diterpene phytoalexin biosynthesis","type":"exact"},{"name":"diterpene phytoalexin formation","type":"exact"},{"name":"diterpene phytoalexin synthesis","type":"exact"}],"termid":"GO:0051502"}


id: GO:0009078
data:
  {"annotated_genes":["SJAG_04145","SJAG_00396","SJAG_03243","SJAG_06635","SJAG_02841","SJAG_03562","SJAG_03985","SJAG_04098","SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[99483,106273,86907,102363,97007,109449,106634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[107288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006551"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino acid that requires pyruvate for its synthesis, e.g. alanine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyruvate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate family amino acid metabolism","type":"exact"}],"termid":"GO:0009078","terms_by_termid":{"GO:0006551":null,"GO:0009098":null,"GO:0042853":null}}


id: GO:0010104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ethylene (ethene) signal transduction.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"regulates","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ethylene-activated signaling pathway","synonyms":[{"name":"regulation of ethene mediated signaling pathway","type":"exact"},{"name":"regulation of ethene mediated signalling pathway","type":"exact"},{"name":"regulation of ethylene mediated signaling pathway","type":"related"},{"name":"regulation of ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0010104"}


id: FYPO:0003377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to nitrosative stress is lower than normal. Total RNA or a specific RNA may be affected. Nitrosative stress often results from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GO:0071500","PMID:20204527","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to nitrosative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to nitrosative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to nitrosative stress","type":"exact"},{"name":"reduced RNA level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003377"}


id: SO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is bound by another molecule.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bound_by_factor","synonyms":[{"name":"bound by factor","type":"exact"}],"termid":"SO:0000277"}


id: PBO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1M2 pseudogene 1","termid":"PBO:0039652"}


id: SO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the final codon of an incompletely annotated transcript is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_terminal_codon_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:incomplete_terminal_codon_variant","type":"exact"},{"name":"incomplete terminal codon variant","type":"exact"},{"name":"partial_codon","type":"exact"}],"termid":"SO:0001626"}


id: PBO:0070833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 12","termid":"PBO:0070833"}


id: PBO:0060367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenesis regulating glycosidase (putative)","termid":"PBO:0060367"}


id: PBO:0048150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN binding protein 2","termid":"PBO:0048150"}


id: PBO:0063215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionyl-CoA carboxylase subunit beta","termid":"PBO:0063215"}


id: PBO:0005080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein (predicted)","termid":"PBO:0005080"}


id: MOD:01396
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:8557573","RESID:AA0473","PubMed:7592021"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"has_functional_parent","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline (Pro)","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01396"}


id: PBO:0012822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-local_domain","termid":"PBO:0012822"}


id: GO:0010557
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id: GO:1904609
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id: PR:Q9UUH7
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id: GO:0018588
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id: GO:0031727
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR2 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR2 chemokine receptor binding","synonyms":[{"name":"CCR2 chemokine receptor ligand","type":"narrow"},{"name":"monocyte chemoattractant protein 1 receptor binding","type":"exact"}],"termid":"GO:0031727"}


id: GO:0106358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADPH.","definition_xrefs":["RHEA:21416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase [NADP+] activity","termid":"GO:0106358"}


id: GO:0038019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of a Wnt receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive a Wnt signal. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:19643732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Wnt receptor recycling","synonyms":[{"name":"Frizzled recycling","type":"narrow"}],"termid":"GO:0038019"}


id: PBO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein 2","termid":"PBO:0004917"}


id: GO:0034345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of type III interferon production. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:add","PMID:16734557","PMID:15546383","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of type III interferon production","termid":"GO:0034344"},{"relation_name":"negatively_regulates","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of type III interferon production","synonyms":[{"name":"down regulation of type III interferon production","type":"exact"},{"name":"down-regulation of type III interferon production","type":"exact"},{"name":"downregulation of type III interferon production","type":"exact"},{"name":"inhibition of type III interferon production","type":"narrow"},{"name":"negative regulation of type III IFN production","type":"exact"}],"termid":"GO:0034345"}


id: GO:1904123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A serotonin receptor signaling pathway that results in positive regulation of fatty acid beta-oxidation.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24120942","GO_REF:0000063","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0023052","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","synonyms":[{"name":"activation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"stimulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"}],"termid":"GO:1904123"}


id: GO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eclosion","synonyms":[{"name":"down regulation of eclosion","type":"exact"},{"name":"down-regulation of eclosion","type":"exact"},{"name":"downregulation of eclosion","type":"exact"},{"name":"inhibition of eclosion","type":"narrow"}],"termid":"GO:0045804"}


id: GO:0033844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of sulfate from the D-galactose 6-sulfate residues of porphyran, producing 3,6-anhydrogalactose residues.","definition_xrefs":["EC:2.5.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"galactose-6-sulfurylase activity","secondary_identifiers":["MetaCyc:2.5.1.5-RXN"],"synonyms":[{"name":"D-galactose-6-sulfate:alkyltransferase (cyclizing) activity","type":"related"},{"name":"galactose 6-sulfatase activity","type":"related"},{"name":"galactose-6-sulfatase activity","type":"related"},{"name":"porphyran sulfatase activity","type":"related"}],"termid":"GO:0033844"}


id: PBO:0053662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 839","termid":"PBO:0053662"}


id: PBO:0030184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_population","termid":"PBO:0030184"}


id: GO:0002720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cytokine production that contributes to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"positively_regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002741","GO:0002744"],"synonyms":[{"name":"activation of cytokine production during immune response","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"positive regulation of cytokine production during immune response","type":"related"},{"name":"positive regulation of cytokine secretion involved in immune response","type":"narrow"},{"name":"stimulation of cytokine production during immune response","type":"narrow"},{"name":"up regulation of cytokine production during immune response","type":"related"},{"name":"up-regulation of cytokine production during immune response","type":"related"},{"name":"upregulation of cytokine production during immune response","type":"related"}],"termid":"GO:0002720"}


id: PBO:0062951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABIR family member 2","termid":"PBO:0062951"}


id: PBO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf4 (predicted)","termid":"PBO:0000639"}


id: PBO:0061680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 98 and 96 precursor","termid":"PBO:0061680"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: GO:0015491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation A(out) + cation B(in) = cation A(in) + cation B(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cation:cation antiporter activity (obsolete GO:0015491)","termid":"GO:0015491"}


id: PBO:0044918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 2","termid":"PBO:0044918"}


id: PBO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm3","termid":"PBO:0005108"}


id: PBO:0051159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38-3 (non-functional)","termid":"PBO:0051159"}


id: PBO:0049327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 1","termid":"PBO:0049327"}


id: GO:0004180
data:
  {"annotated_genes":["SJAG_00451","SJAG_04819","SJAG_00975","SJAG_01868","SJAG_02117","SJAG_03586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84457,105576],"is_not":false,"summary":null,"term":"GO:0004180"},{"annotations":[90667,73231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[100571,84458,88021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain.","direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00451":null,"SJAG_00975":null,"SJAG_01868":null,"SJAG_02117":null,"SJAG_03586":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9753632","Reactome:R-HSA-1247910","RHEA:28783"],"termid":"GO:0004180","terms_by_termid":{"GO:0004180":null,"GO:0004181":null,"GO:0004185":null}}


id: PBO:0003978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase His5","termid":"PBO:0003978"}


id: PBO:0111440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mug28, implicated in mRNA processing","termid":"PBO:0111440"}


id: PBO:0086992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for splicing of the group I intron bI5 of the COB pre-mRNA; nuclear-encoded mitochondrial protein that binds to the RNA to promote splicing; also involved in but not essential for splicing of the COB bI2 intron and the intron in the 21S rRNA gene","termid":"PBO:0086992"}


id: GO:0004674
data:
  {"annotated_genes":["SJAG_01084","SJAG_00402","SJAG_01082","SJAG_00610","SJAG_04461","SJAG_00649","SJAG_02838","SJAG_01000","SJAG_04457","SJAG_05018","SJAG_02878","SJAG_00256","SJAG_00875","SJAG_00845","SJAG_03438","SJAG_00356","SJAG_03209","SJAG_03854","SJAG_00150","SJAG_02022","SJAG_05304","SJAG_04287","SJAG_00378","SJAG_04052","SJAG_01047","SJAG_02058","SJAG_03486","SJAG_00690","SJAG_03386","SJAG_00329","SJAG_02104","SJAG_01618","SJAG_00996","SJAG_03421","SJAG_01654","SJAG_04980","SJAG_03557","SJAG_04268","SJAG_00004","SJAG_00963","SJAG_04435","SJAG_04469","SJAG_04394","SJAG_04465","SJAG_03720","SJAG_02736","SJAG_04468","SJAG_00661","SJAG_03753","SJAG_01680","SJAG_04507","SJAG_02923","SJAG_04312","SJAG_01805","SJAG_00704","SJAG_02858","SJAG_02712","SJAG_02468","SJAG_03061","SJAG_01311","SJAG_03592","SJAG_03384","SJAG_01942","SJAG_02498","SJAG_03501","SJAG_03887","SJAG_03048","SJAG_01373","SJAG_03529","SJAG_03709","SJAG_02426","SJAG_00718","SJAG_04206","SJAG_03602","SJAG_04486","SJAG_04655","SJAG_04761","SJAG_04552","SJAG_04126","SJAG_03376","SJAG_01825","SJAG_04280","SJAG_04232","SJAG_04760","SJAG_03067","SJAG_03967","SJAG_02592","SJAG_00364","SJAG_04734","SJAG_00486","SJAG_01837","SJAG_02760","SJAG_01718","SJAG_04551","SJAG_02249","SJAG_01885","SJAG_03160","SJAG_01855","SJAG_04777","SJAG_00678","SJAG_01787","SJAG_03799","SJAG_05231","SJAG_02392","SJAG_01376","SJAG_00342","SJAG_01799","SJAG_03987","SJAG_02723","SJAG_05290","SJAG_04597","SJAG_01040","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69764,74940,78482,79364,84081,84115,85297,85746,85881,86046,86995,87152,87183,87372,87934,88296,88344,88367,88562,89412,89635,89953,90019,90093,90454,90618,91642,91871,92062,93140,93593,94264,94633,95189,96358,96380,96577,97127,97322,97570,97984,98038,98322,98584,99124,99895,100492,100768,101359,101541,101708,101995,102229,102566,102571,102811,102846,103020,104776,105237,105238,106388,106965,107123,107218,107759,107863,108041,108233,108234,108760,108905,109357,109435,110031,110449,110656,110952,111089,112191,112247,112248,112315,112423,112462,112671,112867,113105,113622,113969,114159,114368,114557,114993],"is_not":false,"summary":null,"term":"GO:0004674"},{"annotations":[113618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004676"},{"annotations":[97179,89769,74211,112670,72376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004683"},{"annotations":[98037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004691"},{"annotations":[90540,102228,105236,92011,101874,105235,98582,111516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004693"},{"annotations":[99035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004697"},{"annotations":[86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004699"},{"annotations":[89021,88722,105881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004694"},{"annotations":[110688,102809,112422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072371"},{"annotations":[112866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035175"},{"annotations":[90040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072354"},{"annotations":[98337,92578,90579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004707"},{"annotations":[83795,97084,88469,102458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004709"},{"annotations":[97085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008349"},{"annotations":[113291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004711"},{"annotations":[92012,94035,90580,102230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008353"},{"annotations":[92013,102231,90541,105239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140834"},{"annotations":[90542,105240,102232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140836"}]},"cv_name":"molecular_function","definition":"Catalysis 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id: GO:0018450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myrtenol + O2 + 2 H+ + 2 e- = 2 H2O + myrtenal.","definition_xrefs":["UM-BBD_reactionID:r0710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"myrtenol dehydrogenase activity","termid":"GO:0018450"}


id: PBO:0039389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha pseudogene 1","termid":"PBO:0039389"}


id: MOD:00709
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur oxygenated L-methionine","synonyms":[{"name":"SOxyMet","type":"exact"}],"termid":"MOD:00709"}


id: PBO:0076752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 2","termid":"PBO:0076752"}


id: PBO:0083343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene CMP2/YML057W","termid":"PBO:0083343"}


id: PATO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being tapering gradually into a rigid point.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuspidate","termid":"PATO:0001973"}


id: PATO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000089 relative disease sensitivity (obsolete PATO:0000089)","termid":"PATO:0000089"}


id: PBO:0047553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF10 antisense RNA 1","termid":"PBO:0047553"}


id: PBO:0055629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3068","termid":"PBO:0055629"}


id: PBO:0084769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NAD+ transporter; involved in the transport of NAD+ into the mitochondria (see also YEA6); member of the mitochondrial carrier subfamily; disputed role as a pyruvate transporter; has putative mouse and human orthologs; YIA6 has a paralog, YEA6, that arose from the whole genome duplication; human NAD+ transporter MCART1/SLC25A51 functionally complements the yia6 yea6 double null mutant, and yeast YIA6 reciprocally complements defects in MCART1/SLC25A51 null cells","termid":"PBO:0084769"}


id: PBO:0067864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 166","termid":"PBO:0067864"}


id: PBO:0061456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA in the aldehyde dehydrogenase 1A pathway","termid":"PBO:0061456"}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["GOC:rb","GOC:pde","PMID:11238902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


id: PBO:0082637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; similar to human ataxin-2","termid":"PBO:0082637"}


id: PBO:0075383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 30","termid":"PBO:0075383"}


id: PBO:0029576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_DEM","termid":"PBO:0029576"}


id: _global:disposition_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has disposition","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disposition_of","secondary_identifiers":["RO:0000092"],"termid":"_global:disposition_of"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: PBO:0082771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle checkpoint; involved in sensing lack of tension on mitotic chromosomes; protects centromeric Rec8p at meiosis I; required for accurate chromosomal segregation at meiosis II and for mitotic chromosome stability; recruits condensin to the pericentric region of chromosomes during meiosis; dissociates from pericentromeres when sister kinetochores are under tension","termid":"PBO:0082771"}


id: GO:0102772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a phytoceramide + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.5","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sphingolipid C4-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-14250","RHEA:55808"],"synonyms":[{"name":"sphingolipid long-chain base 4-hydroxylase activity","type":"related"}],"termid":"GO:0102772"}


id: GO:0061147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the endocardial endothelium over time, from its initial formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelium development","termid":"GO:0003158"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial endothelium development","termid":"GO:0061147"}


id: PBO:0039555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 2","termid":"PBO:0039555"}


id: PBO:0054258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1643","termid":"PBO:0054258"}


id: PBO:0086314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with sequence similarity to acireductone synthases; involved in methionine salvage; found in both the cytoplasm and nucleus","termid":"PBO:0086314"}


id: PBO:0053983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1299","termid":"PBO:0053983"}


id: GO:0006041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine metabolic process","synonyms":[{"name":"chitosamine metabolic process","type":"exact"},{"name":"chitosamine metabolism","type":"exact"},{"name":"glucosamine metabolism","type":"exact"}],"termid":"GO:0006041"}


id: GO:0055056
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[113369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of the D-enantiomer of the hexose monosaccharide glucose from one side of a membrane to the other.","definition_xrefs":["GOC:mah","GOC:jid","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"D-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8981574","Reactome:R-HSA-5632804","Reactome:R-HSA-5632871","Reactome:R-HSA-8981570","Reactome:R-HSA-429094","Reactome:R-HSA-450095","Reactome:R-HSA-8981553","Reactome:R-HSA-8981564","Reactome:R-HSA-5339524"],"termid":"GO:0055056","terms_by_termid":{"GO:0005358":null,"GO:0140108":null}}


id: GO:0060565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of APC-Cdc20 complex activity regulating the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of APC-Cdc20 complex activity (obsolete GO:0060565)","synonyms":[{"name":"inhibition of APC activity during mitotic cell cycle","type":"exact"},{"name":"inhibition of APC-Cdc20 complex activity","type":"exact"},{"name":"inhibition of APC/C activity during mitotic cell cycle","type":"related"},{"name":"inhibition of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"inhibition of mitotic anaphase-promoting complex activity","type":"related"}],"termid":"GO:0060565"}


id: PBO:0011461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit A/ SAGA complex subunit Taf12","termid":"PBO:0011461"}


id: PR:O13822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.06 gene.","definition_xrefs":["UniProtKB:O13822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C19A8.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.06","synonyms":[{"name":"Spom972h-SPAC19A8.06","type":"exact"}],"termid":"PR:O13822"}


id: GO:0170001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ergothioneine from one side of a membrane to the other.","definition_xrefs":["PMID:29530864","PMID:15795384","PMID:20601551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ergothioneine transmembrane transporter activity","termid":"GO:0170001"}


id: PBO:0075582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 6","termid":"PBO:0075582"}


id: GO:1902558
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"}]},"cv_name":"biological_process","definition":"The process in which 5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["PMID:24296033","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902558","terms_by_termid":{"GO:1990553":null}}


id: RO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_with","termid":"RO:0002224"}


id: GO:1901233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in axis elongation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in axis elongation","synonyms":[{"name":"down regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"down-regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"downregulation of convergent extension involved in axis elongation","type":"exact"},{"name":"inhibition of convergent extension involved in axis elongation","type":"narrow"}],"termid":"GO:1901233"}


id: PATO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks parts or has fewer parts of type","synonyms":[{"name":"loss of","type":"exact"}],"termid":"PATO:0001999"}


id: FYPO:0002946
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"cell wall defects","type":"exact"}],"termid":"FYPO:0002946","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0068380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 181","termid":"PBO:0068380"}


id: FYPO:0006995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin silencing at centromere inner repeat","synonyms":[{"name":"normal chromatin silencing at centromere imr","type":"exact"},{"name":"normal chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0006995"}


id: PBO:0072903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAMP1 antisense RNA 1","termid":"PBO:0072903"}


id: PBO:0029494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_anaphase_II","termid":"PBO:0029494"}


id: GO:0044258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown into fatty acids and monoglycerides of lipids in the small intestine. Lipids are broken down by lipases released by the pancreas.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"intestinal lipid catabolic process","synonyms":[{"name":"intestinal lipid breakdown","type":"exact"},{"name":"intestinal lipid catabolism","type":"exact"},{"name":"intestinal lipid degradation","type":"exact"}],"termid":"GO:0044258"}


id: PBO:0041998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 47","termid":"PBO:0041998"}


id: PBO:0064063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 97","termid":"PBO:0064063"}


id: FYPO:0004158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains more than four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"elongated vegetative cell with fragmented septum and more than four nuclei","synonyms":[{"name":"elongated cell with fragmented septum and more than four nuclei during mitotic cell cycle","type":"related"},{"name":"elongated cell with fragmented septum and more than four nuclei during vegetative growth","type":"exact"},{"name":"long vegetative cell with fragmented septum and more than four nuclei","type":"exact"}],"termid":"FYPO:0004158"}


id: PBO:0054695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2104","termid":"PBO:0054695"}


id: PBO:0050747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 9","termid":"PBO:0050747"}


id: PBO:0068342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113B","termid":"PBO:0068342"}


id: GO:0006077
data:
  {"annotated_genes":["SJAG_02590","SJAG_04073","SJAG_02446","SJAG_00771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90414,86818,98638,112729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->6)-beta-D-glucans, compounds composed of glucose residues linked by (1->6)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00771":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_04073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,6-beta-glucan metabolic process","type":"exact"},{"name":"1,6-beta-glucan metabolism","type":"exact"},{"name":"beta-1,6 glucan metabolic process","type":"exact"},{"name":"beta-1,6 glucan metabolism","type":"exact"}],"termid":"GO:0006077","terms_by_termid":{"GO:0006078":null}}


id: PATO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which starts later than the natural start time or the reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed","synonyms":[{"name":"late","type":"related"}],"termid":"PATO:0000502"}


id: PBO:0028059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcriptional_response_to_pheromone","termid":"PBO:0028059"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000257"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: GO:2001043
data:
  {"annotated_genes":["SJAG_01774","SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85959,104146],"is_not":false,"summary":null,"term":"GO:2001043"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01774":null,"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cell separation after cytokinesis","type":"related"},{"name":"positive regulation of cytokinetic cell separation","type":"related"}],"termid":"GO:2001043","terms_by_termid":{"GO:2001043":null}}


id: FYPO:0007288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein galactosylation is normal (i.e. indistinguishable from wild type). Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0042125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein galactosylation during vegetative growth","synonyms":[{"name":"normal protein galactosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007288"}


id: PR:Q9P6I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic non-specific dipeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11014:SF15","PRO:DNx","OMA:SCHPO02354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys-Gly metallodipeptidase dug1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.08","secondary_identifiers":["UniProtKB:Q9P6I2"],"synonyms":[{"name":"GSH degradosomal complex subunit DUG1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CNDP2","type":"exact"}],"termid":"PR:Q9P6I2"}


id: PATO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's inability of being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flexibility","termid":"PATO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflexible","synonyms":[{"name":"stiff","type":"exact"},{"name":"stiffness","type":"related"}],"termid":"PATO:0001545"}


id: PBO:0062707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 1","termid":"PBO:0062707"}


id: GO:0043043
data:
  {"annotated_genes":["SJAG_03494","SJAG_00988","SJAG_04032","SJAG_00792","SJAG_02599","SJAG_04031","SJAG_01351","SJAG_00469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043041"},{"annotations":[90305,90313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[114313,89505,104625,93214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[90270],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[101573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.","definition_xrefs":["GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide anabolism","type":"exact"},{"name":"peptide biosynthesis","type":"exact"},{"name":"peptide formation","type":"exact"},{"name":"peptide synthesis","type":"exact"}],"termid":"GO:0043043","terms_by_termid":{"GO:0006750":null,"GO:0019290":null,"GO:0031169":null,"GO:0043041":null,"GO:1905569":null}}


id: PBO:0061895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive 3","termid":"PBO:0061895"}


id: GO:0044619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism increases the extent of relaxation of smooth muscle in the uterus of a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of relaxation of uterine smooth muscle in another organism","termid":"GO:0044618"},{"relation_name":"is_a","term_name":"positive regulation of uterine smooth muscle relaxation","termid":"GO:1900721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of uterine smooth muscle in another organism","synonyms":[{"name":"positive regulation of relaxation of uterine smooth muscle in other organism","type":"exact"}],"termid":"GO:0044619"}


id: GO:1905011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphate ions from the cytosol across the vacuolar membrane and into the vacuolar lumen.","definition_xrefs":["GOC:TermGenie","GO_REF:0000078","PMID:26554016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transmembrane phosphate ion transport from cytosol to vacuole","secondary_identifiers":["GO:0007037"],"synonyms":[{"name":"vacuolar phosphate transport","type":"broad"}],"termid":"GO:1905011"}


id: GO:1902701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to propan-2-ol.","definition_xrefs":["PMID:18727018","GOC:mengo_curators","PMID:19539744","GO_REF:0000093","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to propan-2-ol (obsolete GO:1902701)","synonyms":[{"name":"pentose breakdown to propan-2-ol","type":"exact"},{"name":"pentose catabolic process to isopropanol","type":"exact"},{"name":"pentose catabolic process to isopropyl alcohol","type":"exact"},{"name":"pentose catabolism to propan-2-ol","type":"exact"},{"name":"pentose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902701"}


id: GO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"},{"relation_name":"part_of","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axillary shoot meristem initiation","synonyms":[{"name":"axillary bud meristem initiation","type":"related"}],"termid":"GO:0090506"}


id: PBO:0109457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid N-acetyltransferase","termid":"PBO:0109457"}


id: PBO:0067988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 290","termid":"PBO:0067988"}


id: PBO:0076239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2","termid":"PBO:0076239"}


id: GO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + glutarate = ADP + glutaryl-CoA + H+ + phosphate.","definition_xrefs":["RHEA:14169","EC:6.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutarate-CoA ligase activity","secondary_identifiers":["MetaCyc:GLUTARATE--COA-LIGASE-RXN","KEGG_REACTION:R02402"],"synonyms":[{"name":"glutarate:CoA ligase (ADP-forming)","type":"related"},{"name":"glutaryl coenzyme A synthetase activity","type":"related"},{"name":"glutaryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047948"}


id: PBO:0060838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural precursor cell expressed, developmentally down-regulated 9","termid":"PBO:0060838"}


id: GO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:15771591","ISBN:0781735149","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002474"}


id: PBO:0064780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1A pseudogene 1","termid":"PBO:0064780"}


id: FYPO:0003218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the modification of a wobble base uridine residue in a tRNA to 5-methoxycarbonylmethyl-2-thiouridine is abolished.","definition_xrefs":["GO:0002926","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","synonyms":[{"name":"abolished mcm5s2U34 biosynthesis","type":"exact"},{"name":"abolished tRNA U34 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","type":"exact"},{"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis during mitotic cell cycle","type":"related"},{"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis during vegetative growth","type":"exact"},{"name":"abolished thiolation and methoxycarbonylmethylation at tRNA U34","type":"exact"},{"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis abolished","type":"exact"}],"termid":"FYPO:0003218"}


id: PBO:0051571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 16","termid":"PBO:0051571"}


id: PBO:0046734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EWS RNA binding protein 1","termid":"PBO:0046734"}


id: PBO:0063732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 4","termid":"PBO:0063732"}


id: PBO:0053785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1036","termid":"PBO:0053785"}


id: PBO:0072252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 27","termid":"PBO:0072252"}


id: GO:0055073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of cadmium ions within an organism or cell.","definition_xrefs":["GOC:ai","GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cadmium ion homeostasis (obsolete GO:0055073)","synonyms":[{"name":"cadmium homeostasis","type":"exact"}],"termid":"GO:0055073"}


id: FYPO:0000788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000788"}


id: PBO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug117","termid":"PBO:0005432"}


id: PBO:0056925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase","termid":"PBO:0056925"}


id: PBO:0077816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 13","termid":"PBO:0077816"}


id: PBO:0055667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 3","termid":"PBO:0055667"}


id: GO:0042489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","PMID:15355794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of odontogenesis","termid":"GO:0042483"},{"relation_name":"is_a","term_name":"regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042487"},{"relation_name":"negatively_regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"down regulation of odontogenesis","type":"broad"},{"name":"down-regulation of odontogenesis","type":"broad"},{"name":"downregulation of odontogenesis","type":"broad"},{"name":"inhibition of odontogenesis","type":"broad"},{"name":"negative regulation of odontogenesis","type":"broad"},{"name":"negative regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"negative regulation of odontogenesis of dentine-containing tooth","type":"related"}],"termid":"GO:0042489"}


id: PBO:0063384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 4","termid":"PBO:0063384"}


id: GO:0007232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to osmotic change, as mediated through a Sho1 osmosensor system.","definition_xrefs":["GOC:jl","PMID:26787842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"osmosensory signaling pathway via Sho1 osmosensor","synonyms":[{"name":"osmosensory signalling pathway via Sho1 osmosensor","type":"exact"},{"name":"signal transduction during osmotic stress via Sho1 osmosensor","type":"exact"}],"termid":"GO:0007232"}


id: PBO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk18 (predicted)","termid":"PBO:0002316"}


id: GO:0005302
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100036],"is_not":false,"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-tyrosine from one side of a membrane to the other. L-tyrosine is 2-amino-3-(4-hydroxyphenyl)propanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-tyrosine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015508"],"synonyms":[{"name":"L-tyrosine permease activity","type":"exact"},{"name":"L-tyrosine transporter activity","type":"broad"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0005302","terms_by_termid":{"GO:0005302":null}}


id: PBO:0048704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 1","termid":"PBO:0048704"}


id: PBO:0070411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA3 pseudogene 1","termid":"PBO:0070411"}


id: PBO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCXR divergent transcript","termid":"PBO:0044666"}


id: PR:Q9USZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02988","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle 20 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.04","secondary_identifiers":["UniProtKB:Q9USZ5"],"synonyms":[{"name":"Spom972h-TRAPPC2","type":"exact"},{"name":"TRAPP 20 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ5"}


id: GO:0007506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonadal mesoderm development","termid":"GO:0007506"}


id: PBO:0026827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0026827"}


id: GO:0098665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of serotonin receptor activity.","definition_xrefs":["PMID:16116092","GOC:bhm","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serotonin receptor complex","synonyms":[{"name":"5-HT receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor complex","type":"exact"},{"name":"5HT receptor complex","type":"exact"}],"termid":"GO:0098665"}


id: PATO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in a tissue by virtue of the relation between the absorbed dose to the effective biological damage of the radiation to that tissue.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation equivalent dose","termid":"PATO:0001746"}


id: GO:0072234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric nephron tubule over time, from its initial formation to the mature structure. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"metanephric tubule development","termid":"GO:0072170"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule development","termid":"GO:0072234"}


id: PBO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK4 antisense RNA 1","termid":"PBO:0045325"}


id: GO:1903667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["GO_REF:0000059","PMID:22711818","GOC:TermGenie","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of negative chemotaxis","termid":"GO:0050923"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of chemorepellent activity","synonyms":[{"name":"regulation of chemorepellant activity","type":"exact"}],"termid":"GO:1903667"}


id: PBO:0004651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Sar1","termid":"PBO:0004651"}


id: PR:Q9UTP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta6 gene.","definition_xrefs":["UniProtKB:Q9UTP3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.05c","synonyms":[{"name":"Spom972h-fta6","type":"exact"},{"name":"sim4 complex subunit fta6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTP3"}


id: FYPO:0005666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"abnormal actin cytoskeleton during meiosis","synonyms":[{"name":"abnormal actin cytoskeleton during meiotic nuclear division","type":"exact"},{"name":"abnormal actin cytoskeleton physical object quality during meiosis","type":"exact"}],"termid":"FYPO:0005666"}


id: PBO:0038602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAP2 intronic transcript 1","termid":"PBO:0038602"}


id: PBO:0080674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 1","termid":"PBO:0080674"}


id: GO:1990533
data:
  {"annotated_genes":["SJAG_02601","SJAG_04283"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103361,112206],"is_not":false,"summary":null,"term":"GO:1990533"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of one subunit known as Dom34 or Pelota that has similarity to translation termination factor eRF1, and another subunit, Hbs1, that is a GTPase with similarity to translation termination factor eRF3. The Dom34-Hbs1 complex has a role in cotranslational mRNA quality control by promoting ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, facilitating no-go decay and nonstop decay.","definition_xrefs":["PMID:21448132","PMID:22503425","PMID:20890290","PMID:21102444","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02601":null,"SJAG_04283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dom34-Hbs1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dom34:Hbs1 complex","type":"exact"}],"termid":"GO:1990533","terms_by_termid":{"GO:1990533":null}}


id: FYPO:0001255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during cellular response to oxygen","synonyms":[{"name":"increased protein accumulation during cellular response to oxygen","type":"related"},{"name":"increased protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001255"}


id: PR:O74173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 1-beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04800","PANTHER:PTHR11595:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.04","secondary_identifiers":["UniProtKB:O74173"],"synonyms":[{"name":"EF-1-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF1B2","type":"exact"}],"termid":"PR:O74173"}


id: GO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 8-oxo-GDP + H2O = 8-oxo-GMP + phosphate.","definition_xrefs":["PMID:22556419","GOC:pde","RHEA:62356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-oxo-GDP phosphatase activity","secondary_identifiers":["EC:3.6.1.58","Reactome:R-HSA-2395873"],"termid":"GO:0044716"}


id: PBO:0066362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 regulator of GUCY2D","termid":"PBO:0066362"}


id: PBO:0005812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metacaspase Pca1","termid":"PBO:0005812"}


id: PBO:0087184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A49; essential for nucleolar assembly and for high polymerase loading rate; required for nucleolar localization of Rpa34p","termid":"PBO:0087184"}


id: PBO:0079744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 11","termid":"PBO:0079744"}


id: PBO:0086839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein tyrosine phosphatase; required for cell cycle arrest in response to oxidative damage of DNA","termid":"PBO:0086839"}


id: PBO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation regulator Gcn1 (predicted)","termid":"PBO:0001424"}


id: SO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleic tag which is used in a ligation step of library preparation process to allow pooling of samples while maintaining ability to identify individual source material and creation of a multiplexed library.","definition_xrefs":["PMID:22574170","OBO:prs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiplexing_sequence_identifier","synonyms":[{"name":"multiplexing sequence identifier","type":"exact"}],"termid":"SO:0002023"}


id: PBO:0070579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 45","termid":"PBO:0070579"}


id: FYECO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any aspect of an experiment that the experimenter controls and that does not depend on which strain/organism/cells are used.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fission yeast phenotype condition","synonyms":[{"name":"phenotype condition","type":"related"}],"termid":"FYECO:0000001"}


id: GO:0032816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"positively_regulates","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell activation","synonyms":[{"name":"activation of natural killer cell activation","type":"narrow"},{"name":"positive regulation of NK cell activation","type":"exact"},{"name":"stimulation of natural killer cell activation","type":"narrow"},{"name":"up regulation of natural killer cell activation","type":"exact"},{"name":"up-regulation of natural killer cell activation","type":"exact"},{"name":"upregulation of natural killer cell activation","type":"exact"}],"termid":"GO:0032816"}


id: PBO:0111065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn GCFC2 ortholog","termid":"PBO:0111065"}


id: GO:1901369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyclic 2,3-bisphospho-D-glyceric acid.","definition_xrefs":["GOC:crds","PMID:2226838","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyclic 2,3-bisphospho-D-glycerate biosynthetic process","synonyms":[{"name":"cDPG biosynthesis","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid anabolism","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid biosynthesis","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid biosynthetic process","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid formation","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid synthesis","type":"exact"},{"name":"cyclic 2,3-diphosphoglycerate biosynthesis","type":"exact"}],"termid":"GO:1901369"}


id: GO:0007631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior associated with the intake of food.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feeding behavior","secondary_identifiers":["Wikipedia:List_of_feeding_behaviours","GO:0044370","GO:0044372","GO:0044369","GO:0044371","GO:0044367","GO:0044366","GO:0044368"],"synonyms":[{"name":"behavioral response to food","type":"exact"},{"name":"behavioural response to food","type":"exact"},{"name":"eating","type":"narrow"},{"name":"feeding behaviour","type":"exact"},{"name":"feeding from phloem of other organism","type":"narrow"},{"name":"feeding from plant phloem","type":"narrow"},{"name":"feeding from tissue of other organism","type":"narrow"},{"name":"feeding from vascular tissue of another organism","type":"narrow"},{"name":"feeding from xylem of other organism","type":"narrow"},{"name":"feeding on blood of other organism","type":"narrow"},{"name":"feeding on or from other organism","type":"narrow"},{"name":"feeding on plant sap","type":"narrow"},{"name":"hematophagy","type":"narrow"},{"name":"injection of substance into other organism during feeding on blood of other organism","type":"narrow"},{"name":"taking of blood meal","type":"narrow"}],"termid":"GO:0007631"}


id: PATO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased temperature","secondary_identifiers":["PATO:0000678"],"synonyms":[{"name":"high temperature","type":"exact"},{"name":"hot","type":"exact"}],"termid":"PATO:0001305"}


id: GO:0010041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(III) ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron(III) ion","synonyms":[{"name":"response to iron(III)","type":"exact"}],"termid":"GO:0010041"}


id: PBO:0029707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division","termid":"PBO:0029707"}


id: PBO:0076793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEDC2 antisense RNA 1","termid":"PBO:0076793"}


id: PBO:0065185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROSER2 antisense RNA 1","termid":"PBO:0065185"}


id: PBO:0062899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoglutarate receptor 1","termid":"PBO:0062899"}


id: GO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear outer membrane (obsolete GO:0031309)","synonyms":[{"name":"integral to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031309"}


id: PBO:0053747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 974","termid":"PBO:0053747"}


id: PBO:0036546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein, human C6orf136 ortholog","termid":"PBO:0036546"}


id: PBO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6B","termid":"PBO:0060290"}


id: MOD:00002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-glycosylserine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-glycosyl-L-serine","synonyms":[{"name":"OGlycoSer","type":"exact"}],"termid":"MOD:00002"}


id: PBO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterised trans-sulfuration enzyme (predicted)","termid":"PBO:0002368"}


id: PBO:0049916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif 1","termid":"PBO:0049916"}


id: FYPO:0000820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a peptide pheromone released into the growth medium by cells is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of substance in growth medium","termid":"FYPO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased concentration of pheromone in growth medium","synonyms":[{"name":"decreased accumulation of pheromone in growth medium","type":"related"},{"name":"decreased concentration of peptide pheromone in growth medium","type":"exact"},{"name":"decreased level of pheromone in growth medium","type":"exact"},{"name":"decreased release of pheromone into growth medium","type":"related"},{"name":"pheromone production: decreased","type":"related"},{"name":"reduced concentration of pheromone in growth medium","type":"exact"}],"termid":"FYPO:0000820"}


id: GO:0032258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cytoplasm to vacuole targeting pathway that uses machinery common with autophagy. The Cvt vesicle is formed when the receptor protein, Atg19, binds to the complexes of the target protein (aminopeptidase or alpha-mannosidase homododecamers), forming the Cvt complex. Atg11 binds to Atg9 and transports the Cvt complex to the pre-autophagosome (PAS). The phagophore membrane expands around the Cvt complex (excluding bulk cytoplasm) forming the Cvt vesicle. This pathway is mostly observed in yeast.","definition_xrefs":["PMID:12865942","PMID:15659643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"is_a","term_name":"process utilizing autophagic mechanism","termid":"GO:0061919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006605","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cytoplasm to vacuole targeting by the Cvt pathway","termid":"GO:0032258"}


id: PBO:0060565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 1","termid":"PBO:0060565"}


id: SO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non coding RNA sequence, present in the cytoplasm.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"scRNA_primary_transcript","termid":"SO:0000012"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:scRNA","type":"exact"},{"name":"small cytoplasmic RNA","type":"exact"}],"termid":"SO:0000013"}


id: GO:2000756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"}


id: FYECO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which palmitic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ palmitic acid","termid":"FYECO:0000043"}


id: MOD:00031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-selenocysteine, a natural pretranslational modification.","definition_xrefs":["ChEBI:30000","PubMed:10523135","PubMed:2037562","PubMed:1066676","PubMed:4734725","PubMed:6076213","RESID:AA0022","PubMed:2963330","PubMed:6217842","PubMed:6714945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteine residue","synonyms":[{"name":"(2R)-2-amino-3-selanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-selanylpropanoic acid","type":"exact"},{"name":"3-selenylalanine","type":"exact"},{"name":"L-selenocysteine","type":"exact"},{"name":"NON_STD Selenocysteine","type":"exact"},{"name":"SeCys","type":"exact"},{"name":"Sec","type":"exact"},{"name":"selenium cysteine","type":"exact"}],"termid":"MOD:00031"}


id: PBO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 18","termid":"PBO:0070713"}


id: PBO:0072884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 2","termid":"PBO:0072884"}


id: PBO:0056717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchyme homeobox 2","termid":"PBO:0056717"}


id: GO:2000180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of androgen biosynthetic process.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"negatively_regulates","term_name":"androgen biosynthetic process","termid":"GO:0006702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of androgen biosynthetic process","synonyms":[{"name":"negative regulation of androgen anabolism","type":"exact"},{"name":"negative regulation of androgen biosynthesis","type":"exact"},{"name":"negative regulation of androgen formation","type":"exact"},{"name":"negative regulation of androgen synthesis","type":"exact"}],"termid":"GO:2000180"}


id: PBO:0028115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tributyltin","termid":"PBO:0028115"}


id: PR:O13752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized TLC domain-containing protein C17A2.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.02c","secondary_identifiers":["UniProtKB:O13752"],"synonyms":[{"name":"Spom972h-TMEM56","type":"exact"}],"termid":"PR:O13752"}


id: PBO:0064939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyglutamine binding protein 1","termid":"PBO:0064939"}


id: PBO:0043384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clavesin 2","termid":"PBO:0043384"}


id: PBO:0045162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 2","termid":"PBO:0045162"}


id: PBO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX/EXS domain protein (predicted)","termid":"PBO:0005850"}


id: PBO:0058640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-2","termid":"PBO:0058640"}


id: GO:0042983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta, a glycoprotein associated with Alzheimer's disease.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"amyloid precursor protein metabolic process","termid":"GO:0042982"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid precursor protein biosynthetic process","synonyms":[{"name":"APP biosynthesis","type":"exact"},{"name":"APP biosynthetic process","type":"exact"},{"name":"amyloid precursor protein anabolism","type":"exact"},{"name":"amyloid precursor protein biosynthesis","type":"exact"},{"name":"amyloid precursor protein formation","type":"exact"},{"name":"amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042983"}


id: GO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splitting or migration of one epithelial sheet into two involved in the process of deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"delamination involved in gastrulation with mouth forming second","termid":"GO:0055112"}


id: PBO:0060737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 2","termid":"PBO:0060737"}


id: PBO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament-based_movement","termid":"PBO:0035754"}


id: GO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microspike, a dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:11429692","PMID:12153987","ISBN:0815316194","PMID:19095735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"microspike assembly","synonyms":[{"name":"microspike biogenesis","type":"related"},{"name":"microspike biosynthesis","type":"exact"},{"name":"microspike formation","type":"exact"}],"termid":"GO:0030035"}


id: GO:1902838
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["PMID:23087209","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nuclear migration along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"regulation of nuclear movement, microtubule-mediated","type":"broad"},{"name":"regulation of nucleus migration","type":"broad"},{"name":"regulation of transport of nucleus by microtubules","type":"exact"},{"name":"regulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902838","terms_by_termid":{"GO:1902854":null}}


id: PR:O59830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.10 gene.","definition_xrefs":["UniProtKB:O59830","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C965.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.10","synonyms":[{"name":"Spom972h-SPCC965.10","type":"exact"}],"termid":"PR:O59830"}


id: GO:1901938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-exo-alpha-bergamotene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene metabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene metabolism","type":"exact"}],"termid":"GO:1901938"}


id: PBO:0027411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thioredoxin_peroxidase_activity","termid":"PBO:0027411"}


id: SO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4-acetyl-2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_acetyl_2_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:027"],"synonyms":[{"name":"N4 acetyl 2 prime O methylcytidine","type":"exact"},{"name":"N4-acetyl-2'-O-methylcytidine","type":"exact"},{"name":"ac4Cm","type":"exact"}],"termid":"SO:0001288"}


id: GO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of ubiquitin groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deubiquitination (obsolete GO:0016578)","synonyms":[{"name":"histone deubiquitinylation","type":"exact"},{"name":"histone deubiquitylation","type":"exact"}],"termid":"GO:0016578"}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: GO:0071009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal snRNP complex that is formed by the association of the U4atac/U6atac and U5 snRNPs.","definition_xrefs":["GOC:mah","PMID:16201866","ISBN:0879695897","GOC:krc","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U4atac/U6atac x U5 tri-snRNP complex","synonyms":[{"name":"U4atac/U6atac.U5 snRNP complex","type":"exact"}],"termid":"GO:0071009"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: PBO:0059415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 1","termid":"PBO:0059415"}


id: PBO:0089297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase Ted1","termid":"PBO:0089297"}


id: PBO:0053339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 207","termid":"PBO:0053339"}


id: PBO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease Sxa1","termid":"PBO:0002000"}


id: PBO:0073701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKAP1 antisense RNA 2","termid":"PBO:0073701"}


id: GO:1904251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of bile acid metabolic process","synonyms":[{"name":"regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904251"}


id: FYPO:0000911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the cell nucleus is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:12896976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002403","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased nuclear RNA level during vegetative growth","synonyms":[{"name":"increased RNA level in nucleus during vegetative growth","type":"exact"},{"name":"increased nuclear RNA level during mitotic cell cycle","type":"related"},{"name":"increased nuclear transcript level during vegetative growth","type":"exact"},{"name":"nuclear RNA accumulation during vegetative growth","type":"related"},{"name":"nuclear accumulation of RNA","type":"related"},{"name":"nuclear accumulation of mRNA","type":"narrow"},{"name":"nuclear mRNA accumulation during vegetative growth","type":"narrow"}],"termid":"FYPO:0000911"}


id: PBO:0060615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1B pseudogene","termid":"PBO:0060615"}


id: PBO:0083242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression induced by iron-regulated transcriptional activator Aft2p","termid":"PBO:0083242"}


id: PBO:0076430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 6","termid":"PBO:0076430"}


id: PBO:0062830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSMR divergent transcript","termid":"PBO:0062830"}


id: PR:Q9UTL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C144.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.05","synonyms":[{"name":"Spom972h-SPAC144.05","type":"exact"}],"termid":"PR:Q9UTL9"}


id: FYPO:0000822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of pheromone in growth medium","termid":"FYPO:0000820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased concentration of P-factor in growth medium","synonyms":[{"name":"decreased accumulation of P-factor in growth medium","type":"related"},{"name":"decreased level of P-factor in growth medium","type":"exact"},{"name":"decreased release of P-factor into growth medium","type":"related"},{"name":"reduced concentration of P-factor in growth medium","type":"exact"}],"termid":"FYPO:0000822"}


