# terms

id: GO:0060253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of glial cell proliferation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"negatively_regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell proliferation","termid":"GO:0060253"}


id: PBO:0071161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a","termid":"PBO:0071161"}


id: PBO:0109518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPDYE1 and UBE2D4 antisense RNA 1","termid":"PBO:0109518"}


id: PBO:0057011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 101-2","termid":"PBO:0057011"}


id: FYPO:0000213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which vesicle-mediated transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal vesicle-mediated transport during vegetative growth","synonyms":[{"name":"abnormal vesicle-mediated protein transport during vegetative growth","type":"narrow"},{"name":"abnormal vesicle-mediated transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000213"}


id: PBO:0029543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population,_vegetative_cells_with_abnormal_morphology,_including_long_cells_(obsolete_FYPO:0002179)","termid":"PBO:0029543"}


id: PBO:0042954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 8","termid":"PBO:0042954"}


id: PBO:0044833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 121","termid":"PBO:0044833"}


id: GO:0099140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the presynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton organization","termid":"GO:0099187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"presynaptic actin cytoskeleton organization","termid":"GO:0099140"}


id: PBO:0057972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689d-2","termid":"PBO:0057972"}


id: PBO:0063582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo ribosomal biogenesis factor 1 pseudogene 2","termid":"PBO:0063582"}


id: PBO:0017079
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GalactoMannan Synthesis defective","termid":"PBO:0017079"}


id: GO:0042128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances.","definition_xrefs":["PMID:10542156","PMID:8122899","GOC:mah","GOC:das"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate metabolic process","termid":"GO:0042126"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0071941"],"is_obsolete":false,"name":"nitrate assimilation","secondary_identifiers":["MetaCyc:PWY-381"],"synonyms":[{"name":"assimilatory nitrate reduction","type":"exact"}],"termid":"GO:0042128"}


id: PBO:0061543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 6","termid":"PBO:0061543"}


id: GO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume","synonyms":[{"name":"diuresis","type":"broad"},{"name":"elevation of urinary volume","type":"exact"},{"name":"increase in urine flow","type":"exact"}],"termid":"GO:0035810"}


id: PBO:0088496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family protein Rtc3","termid":"PBO:0088496"}


id: GO:0034631
data:
  {"annotated_genes":["SJAG_01546","SJAG_03835","SJAG_03116","SJAG_03062","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[105224,95409,92967,99236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["PMID:17486116","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"},{"relation_name":"part_of","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"microtubule anchoring at spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to SPB","type":"exact"},{"name":"attachment of spindle microtubules to spindle pole body","type":"exact"},{"name":"microtubule anchoring at SPB","type":"exact"}],"termid":"GO:0034631","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: PBO:0077114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 23","termid":"PBO:0077114"}


id: GO:0061942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of c-di-GMP signaling.","definition_xrefs":["PMID:22864416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of c-di-GMP signaling","termid":"GO:0061940"},{"relation_name":"negatively_regulates","term_name":"c-di-GMP signaling","termid":"GO:0061939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of c-di-GMP signaling","termid":"GO:0061942"}


id: GO:0045481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-endo-hydroxycineole + NAD+ = 6-oxocineole + H+ + NADH.","definition_xrefs":["RHEA:11736","EC:1.1.1.241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-endo-hydroxycineole dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02994","MetaCyc:6-ENDO-HYDROXYCINEOLE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"6-endo-hydroxycineole:NAD+ 6-oxidoreductase activity","type":"related"}],"termid":"GO:0045481"}


id: PBO:0049406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2B","termid":"PBO:0049406"}


id: GO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-threonine to form peptidyl-O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"peptidyl-threonine sulfation","termid":"GO:0050985"}


id: GO:0050055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonoate D-ring-lactone + H2O = limonoate.","definition_xrefs":["MetaCyc:LIMONIN-D-RING-LACTONASE-RXN","EC:3.1.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"limonin-D-ring-lactonase activity","secondary_identifiers":["RHEA:10896"],"synonyms":[{"name":"limonin lactone hydrolase activity","type":"related"},{"name":"limonin-D-ring-lactone hydrolase activity","type":"related"},{"name":"limonoate-D-ring-lactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050055"}


id: GO:0040027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:kmv","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vulval development","termid":"GO:0040028"},{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"negatively_regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vulval development","synonyms":[{"name":"down regulation of vulval development","type":"exact"},{"name":"down-regulation of vulval development","type":"exact"},{"name":"downregulation of vulval development","type":"exact"},{"name":"inhibition of vulval development","type":"narrow"}],"termid":"GO:0040027"}


id: PBO:0087594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; involved in the cellular stress response; similar to S. pombe Tti2p; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0087594"}


id: GO:0051501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diterpene phytoalexins, a class of diterpene formed in plants in response to fungal infection, physical damage, chemical injury, or a pathogenic process; they are sometimes referred to as plant antibiotics. Diterpenes are unsaturated hydrocarbons containing 20 carbon atoms and 4 branched methyl groups and are made up of isoprenoid units.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"diterpene phytoalexin metabolic process","synonyms":[{"name":"diterpene phytoalexin metabolism","type":"exact"}],"termid":"GO:0051501"}


id: PBO:0073275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 10","termid":"PBO:0073275"}


id: MOD:01370
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 6x(13)C,1x(15)N labeled residue.","definition_xrefs":["PubMed:11857757","PubMed:11999733","PubMed:12175151","Unimod:695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,1x(15)N labeled residue","synonyms":[{"name":"13C(6) 15N(1) Silac label","type":"related"},{"name":"Label:13C(6)15N(1)","type":"related"}],"termid":"MOD:01370"}


id: FYPO:0006176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of actin cortical patch localization","synonyms":[{"name":"decreased rate of actin cortical patch localisation","type":"exact"},{"name":"decreased rate of actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cortical patch localization during vegetative growth","type":"exact"},{"name":"decreased rate of actin cortical patch movement","type":"related"},{"name":"decreased rate of actin patch localization","type":"exact"},{"name":"reduced rate of actin cortical patch localization","type":"exact"}],"termid":"FYPO:0006176"}


id: GO:1902244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cis-abienol.","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cis-abienol metabolic process","synonyms":[{"name":"cis-abienol metabolism","type":"exact"}],"termid":"GO:1902244"}


id: PR:Q9HGN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36B7.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGN8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.02","synonyms":[{"name":"Spom972h-SPBC36B7.02","type":"exact"}],"termid":"PR:Q9HGN8"}


id: GO:0098819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that depolarizes a postsynaptic membrane relative to its resting potential. This has an excitatory effect on the post-synaptic cell, moving the membrane potential towards the firing threshold.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depolarization of postsynaptic membrane","termid":"GO:0098819"}


id: PBO:0081077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC8B, pseudogene","termid":"PBO:0081077"}


id: PBO:0058531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6076","termid":"PBO:0058531"}


id: PBO:0068404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 223","termid":"PBO:0068404"}


id: PBO:0085760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in the cell cycle checkpoint into anaphase; in complex with Mad1p and Bub3p, prevents progression into anaphase in presence of spindle damage; Cdc28p-mediated phosphorylation at Bub1p-T566 is important for degradation in anaphase and adaptation of checkpoint to prolonged mitotic arrest; associates with centromere DNA via Skp1p; involved in Sgo1p relocalization in response to sister kinetochore tension; paralog MAD3 arose from whole genome duplication","termid":"PBO:0085760"}


id: GO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl","PMID:21781281","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"modulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044488"}


id: GO:0033104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that permits the transfer of proteins into the extracellular milieu or directly into host cells via the type VI secretion system. Proteins secreted by this complex do not require an N-terminal signal sequence.","definition_xrefs":["PMID:16763151","GOC:mlg","PMID:16432199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type VI protein secretion system complex","synonyms":[{"name":"T6SS complex","type":"exact"}],"termid":"GO:0033104"}


id: PBO:0054592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1995","termid":"PBO:0054592"}


id: PBO:0038306
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_level","termid":"PBO:0038306"}


id: GO:0140545
data:
  {"annotated_genes":["SJAG_04187","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85501,100400],"is_not":false,"summary":null,"term":"GO:0140545"}]},"cv_name":"molecular_function","definition":"An ATP-dependent molecular chaperone activity that mediates the solubilization of ordered protein aggregates.","definition_xrefs":["PMID:26312418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein disaggregase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein disaggregase activity","type":"broad"},{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140545","terms_by_termid":{"GO:0140545":null}}


id: GO:0035472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the choriogonadotropin hormone to initiate a change in cell activity.","definition_xrefs":["GOC:bf","PMID:1922095","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"choriogonadotropin hormone receptor activity","synonyms":[{"name":"CG receptor activity","type":"exact"},{"name":"chorio-gonadotrophin receptor activity","type":"exact"},{"name":"chorionic gonadotropin hormone receptor","type":"exact"}],"termid":"GO:0035472"}


id: FYPO:0001396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal NETO","synonyms":[{"name":"normal NETO during mitotic cell cycle","type":"related"},{"name":"normal NETO during vegetative growth","type":"exact"},{"name":"normal activation of bipolar cell growth","type":"related"},{"name":"normal cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"normal new end take-off","type":"exact"},{"name":"normal switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0001396"}


id: GO:0098928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"presynaptic signal transduction","synonyms":[{"name":"presynaptic signaling pathway","type":"exact"}],"termid":"GO:0098928"}


id: GO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.","definition_xrefs":["GOC:pr","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 methylation (obsolete GO:0070734)","synonyms":[{"name":"histone H3 K27 methylation","type":"exact"},{"name":"histone H3K27me","type":"exact"},{"name":"histone lysine H3 K27 methylation","type":"exact"}],"termid":"GO:0070734"}


id: GO:0060220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}


id: PBO:0065115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C iota","termid":"PBO:0065115"}


id: GO:0075160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075160)","synonyms":[{"name":"positive regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075160"}


id: PBO:0039133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl tRNA synthetase complex interacting multifunctional protein 2","termid":"PBO:0039133"}


id: PBO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit Snt2","termid":"PBO:0001259"}


id: PBO:0089287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter","termid":"PBO:0089287"}


id: GO:0021951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that guide a precerebellar neuron towards their signals, where this process is involved in tangential migration.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in precerebellar neuron migration","synonyms":[{"name":"positive chemotaxis involved in precerebellar neuron migration","type":"exact"}],"termid":"GO:0021951"}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: PBO:0026853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026853"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: PBO:0065388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 2","termid":"PBO:0065388"}


id: MOD:02017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with an arachidonoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"arachidonoylated residue","termid":"MOD:02018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-arachidonoylated residue","termid":"MOD:02017"}


id: PBO:0005311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ubiquinone binding protein Coq10","termid":"PBO:0005311"}


id: PBO:0072329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 15","termid":"PBO:0072329"}


id: GO:1902025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrate into a cell or organelle.","definition_xrefs":["PMID:22658680","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nitrate import","synonyms":[{"name":"nitrate influx","type":"exact"},{"name":"nitrate uptake","type":"exact"}],"termid":"GO:1902025"}


id: FYPO:0000201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone deacetylation during vegetative growth","synonyms":[{"name":"abnormal histone deacetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000201"}


id: PBO:0052425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KiSS-1 metastasis suppressor","termid":"PBO:0052425"}


id: CHEBI:16240
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen peroxide","termid":"CHEBI:16240"}


id: FYPO:0000366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA localization is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA localization during vegetative growth","termid":"FYPO:0000360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA localization","synonyms":[{"name":"RNA localization: decreased","type":"related"},{"name":"decreased RNA localisation","type":"exact"},{"name":"decreased RNA localization during mitotic cell cycle","type":"related"},{"name":"decreased RNA localization during vegetative growth","type":"exact"},{"name":"reduced RNA localization","type":"exact"}],"termid":"FYPO:0000366"}


id: PBO:0029469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucose_binding","termid":"PBO:0029469"}


id: PBO:0027016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_catalytic_activity","termid":"PBO:0027016"}


id: GO:2000425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of apoptotic cell clearance","synonyms":[{"name":"regulation of apoptotic cell removal","type":"exact"},{"name":"regulation of efferocytosis","type":"exact"},{"name":"regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000425"}


id: PBO:0063024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4","termid":"PBO:0063024"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"}],"termid":"GO:0120332"}


id: PBO:0039186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 17A","termid":"PBO:0039186"}


id: PR:O13825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immediate early response 3-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01030","PRO:DNx","PANTHER:PTHR15858:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.09","secondary_identifiers":["UniProtKB:O13825"],"synonyms":[{"name":"Spom972h-IER3IP1","type":"exact"}],"termid":"PR:O13825"}


id: PBO:0029057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole","termid":"PBO:0029057"}


id: GO:0007550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of dosage compensation (obsolete GO:0007550)","synonyms":[{"name":"establishment of dosage compensation","type":"exact"}],"termid":"GO:0007550"}


id: GO:0015931
data:
  {"annotated_genes":["SJAG_00641","SJAG_04148","SJAG_01185","SJAG_03470","SJAG_01529","SJAG_03729","SJAG_00612","SJAG_03002","SJAG_03986","SJAG_02661","SJAG_04017","SJAG_00434","SJAG_03156","SJAG_00154","SJAG_03300","SJAG_04622","SJAG_00298","SJAG_03334","SJAG_05328","SJAG_02520","SJAG_04162","SJAG_00093","SJAG_01652","SJAG_04721","SJAG_04202","SJAG_04536","SJAG_01083","SJAG_03283","SJAG_00992","SJAG_01534","SJAG_00471","SJAG_04347","SJAG_02534","SJAG_01715","SJAG_03847","SJAG_01584","SJAG_04472","SJAG_02425","SJAG_03593","SJAG_04697","SJAG_04480","SJAG_03452","SJAG_02209","SJAG_01960","SJAG_02050","SJAG_00375","SJAG_03503","SJAG_04115","SJAG_04589","SJAG_02704","SJAG_04083","SJAG_02757","SJAG_00178","SJAG_04328","SJAG_04325","SJAG_04310","SJAG_04379","SJAG_04645","SJAG_04406","SJAG_00760","SJAG_01374","SJAG_01177","SJAG_03693","SJAG_02274","SJAG_03358","SJAG_01013","SJAG_01467","SJAG_00339","SJAG_01449","SJAG_01065","SJAG_04656","SJAG_03299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[99039,107088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[107089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[61280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035350"},{"annotations":[89535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[85212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[63025,111328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[107090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[107091,99040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[87049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[103755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[89103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[111684,99184,101561,111073,113545,113419,85711,86833,93298,85234,97331,100130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[59277,58093,63955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[61279,107092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901679"},{"annotations":[106625,112237,112495,111685,111171,100131,88205,97573,98832,101924,104890,107312,115060,93147,111979,98931,102345,109442,112748,103827,87167,98149,110642,106059,114164,88395,112601,92735,98047,107944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[95483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[96596,101238,92326,85244,90198,91177,92707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[98740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[101453,109727,85581,101926,108190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[95719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[109728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"},{"annotations":[84617,111737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[108567,111738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[89305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[108568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[101159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[101160,65708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound 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compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0015931","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0015867":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0035348":null,"GO:0035350":null,"GO:0036085":null,"GO:0051028":null,"GO:0071528":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:0140021":null,"GO:1901679":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null,"GO:1990569":null,"GO:1990570":null}}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: GO:0035047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rotation of centrosomes and associated pronuclei in one-cell embryos such as those of Caenorhabditis elegans, occurring as a transition between pronuclear migration and pronuclear fusion.","definition_xrefs":["ISBN:087969307X","PMID:10085292","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centrosomal and pronuclear rotation","termid":"GO:0035047"}


id: GO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydrouracil + H2O = 3-ureidopropionate.","definition_xrefs":["EC:3.5.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydropyrimidinase activity","secondary_identifiers":["RHEA:16121","Reactome:R-HSA-73589","Reactome:R-HSA-73618","MetaCyc:DIHYDROPYRIMIDINASE-RXN"],"synonyms":[{"name":"5,6-dihydropyrimidine amidohydrolase activity","type":"related"},{"name":"D-hydantoinase activity","type":"related"},{"name":"hydantoin peptidase activity","type":"related"},{"name":"hydantoinase activity","type":"related"},{"name":"hydropyrimidine hydrase activity","type":"related"},{"name":"pyrimidine hydrase activity","type":"related"}],"termid":"GO:0004157"}


id: PBO:0068164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 471","termid":"PBO:0068164"}


id: PBO:0071979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 8","termid":"PBO:0071979"}


id: PBO:0054212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1592","termid":"PBO:0054212"}


id: PBO:0060175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTUS2 antisense RNA 2","termid":"PBO:0060175"}


id: GO:0004704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of the alpha or beta subunit of the inhibitor of kappaB kinase complex (IKK).","definition_xrefs":["PMID:20685151"],"gene_count":0,"genotype_count":0,"name":"obsolete NF-kappaB-inducing kinase activity (obsolete GO:0004704)","synonyms":[{"name":"NIK","type":"exact"}],"termid":"GO:0004704"}


id: PBO:0036116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_actin_filament-based_movement","termid":"PBO:0036116"}


id: PBO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member D","termid":"PBO:0047049"}


id: MOD:01183
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-selenocysteine residues to form L-selenocystine,","definition_xrefs":["PubMed:17715293","ChEBI:28553","PubMed:6076213","RESID:AA0437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocystine (oxidized selenocysteine) (Sec-Sec)","synonyms":[{"name":"(R,R)-3,3'-diselane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobisalanine","type":"exact"},{"name":"3,3'-diselenodialanine","type":"exact"},{"name":"CROSSLNK Selenocystine (Sec-Sec)","type":"exact"},{"name":"L-selenocystine","type":"exact"},{"name":"Sec2","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldiselenide","type":"exact"},{"name":"beta,beta'-diselenodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-diselenide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)diselenide","type":"exact"},{"name":"diselenocysteine","type":"exact"},{"name":"selenium cystine","type":"exact"}],"termid":"MOD:01183"}


id: FYPO:0007928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethylenediaminetetraacetic acid (EDTA). Cells stop growing (and may die) at a concentration of ethylenediaminetetraacetic acid (EDTA) that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ethylenediaminetetraacetic acid","synonyms":[{"name":"sensitive to EDTA","type":"exact"}],"termid":"FYPO:0007928"}


id: PBO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 5","termid":"PBO:0017082"}


id: PBO:0091867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, S. japonicus protein (SJAG_00124) predicted on opposite strand, one is likely incorrect, similarity detected with tblastn (S. japonicus 4008650-4008727) in this frame","termid":"PBO:0091867"}


id: GO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:23430248","PMID:22228629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"premature acrosome loss","termid":"GO:0061948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of premature acrosome loss","termid":"GO:0061949"}


id: GO:0048732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gland development","termid":"GO:0048732"}


id: GO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic salinity response","termid":"GO:0042538"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic salinity response","synonyms":[{"name":"cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:0071475"}


id: GO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"}


id: PBO:0039965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 8","termid":"PBO:0039965"}


id: GO:0044127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont regulates its progression from an initial condition to a later condition, within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of development of symbiont in host","termid":"GO:0044127"}


id: PBO:0055641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3080","termid":"PBO:0055641"}


id: GO:0036431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dCMP = ADP + dCDP.","definition_xrefs":["RHEA:25094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylate kinase activity","termid":"GO:0004127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"dCMP kinase activity","secondary_identifiers":["MetaCyc:RXN-7913","KEGG_REACTION:R01665"],"synonyms":[{"name":"ATP:dCMP phosphotransferase activity","type":"exact"}],"termid":"GO:0036431"}


id: GO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"negatively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell proliferation","synonyms":[{"name":"down regulation of mast cell proliferation","type":"exact"},{"name":"down-regulation of mast cell proliferation","type":"exact"},{"name":"downregulation of mast cell proliferation","type":"exact"},{"name":"inhibition of mast cell proliferation","type":"narrow"}],"termid":"GO:0070667"}


id: GO:0009909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of shoot system development","termid":"GO:0048831"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flower development","termid":"GO:0009909"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: GO:0033557
data:
  {"annotated_genes":["SJAG_05237","SJAG_05180"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95464,97349],"is_not":false,"summary":null,"term":"GO:0033557"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses an endonuclease activity that specifically cleaves certain types of branched DNA structures; because such structures often form during the replication ribosomal DNA (rDNA) repeats, the complex plays a role in the maintenance of rDNA. The subunits are known as Slx1 and Slx 4 in budding and fission yeasts, and are conserved in eukaryotes.","definition_xrefs":["PMID:16467377","PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Slx1-Slx4 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033557","terms_by_termid":{"GO:0033557":null}}


id: FYPO:0002150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which none of the cells in a population of spores are viable. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell population","termid":"FYPO:0002059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002059"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002059","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"inviable spore population","synonyms":[{"name":"essential in spore population","type":"related"},{"name":"inviable population of spores","type":"exact"},{"name":"lethal in spore population","type":"exact"}],"termid":"FYPO:0002150"}


id: GO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta5 integrin complex bound to fibronectin and secreted frizzled-related protein 2.","definition_xrefs":["PMID:14709558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha5-beta5-fibronectin-SFRP2 complex","synonyms":[{"name":"ITGA5-ITGB5-FN-1-SFRP2 complex","type":"narrow"}],"termid":"GO:0071138"}


id: GO:0099026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of presynaptic membrane (obsolete GO:0099026)","synonyms":[{"name":"anchored component of presynaptic plasma membrane","type":"exact"}],"termid":"GO:0099026"}


id: PBO:0065159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 9","termid":"PBO:0065159"}


id: PBO:0091841
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A replaces histone H3 in new nucleosomes at centromeres during mitotic G2 phase","termid":"PBO:0091841"}


id: PBO:0028411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chromium","termid":"PBO:0028411"}


id: PBO:0057368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-2","termid":"PBO:0057368"}


id: PBO:0069940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1233, pseudogene","termid":"PBO:0069940"}


id: GO:0141146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of a host tissue. This can occur via the disruption of the extracellular matrix, or the detachment of cells from the extracellular matrix, or the dissociation of the cells composing that tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:14651638","PMID:11982763","PMID:26355030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host tissue","synonyms":[{"name":"cytopathogenic effect","type":"related"}],"termid":"GO:0141146"}


id: PBO:0040685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 3","termid":"PBO:0040685"}


id: PBO:0055631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3070","termid":"PBO:0055631"}


id: PBO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opposite strand to sno20","termid":"PBO:0004046"}


id: PBO:0068889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 130, pseudogene","termid":"PBO:0068889"}


id: GO:2000231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic stellate cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast proliferation","termid":"GO:0048146"},{"relation_name":"is_a","term_name":"regulation of pancreatic stellate cell proliferation","termid":"GO:2000229"},{"relation_name":"positively_regulates","term_name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic stellate cell proliferation","termid":"GO:2000231"}


id: PBO:0081521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 430","termid":"PBO:0081521"}


id: PR:O94478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug137 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 137 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.11","synonyms":[{"name":"Spom972h-mug137","type":"exact"}],"termid":"PR:O94478"}


id: FYPO:0006339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:15937127"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"lethal; mononucleate vegetative cell with mislocalized nucleus","type":"exact"},{"name":"mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"mononucleate cell with asymmetrically localized nucleus","type":"exact"},{"name":"mononucleate cell with displaced nucleus","type":"exact"},{"name":"mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"mononucleate cell with misplaced nucleus","type":"exact"},{"name":"mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"vegetative cell with mislocalized mononucleus","type":"exact"}],"termid":"FYPO:0006339"}


id: GO:0048019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to decrease the ability of the receptor agonist to bind and activate the receptor.","definition_xrefs":["GOC:ceb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor inhibitor activity","termid":"GO:0030547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0005515","GO:0003674","GO:0098772","GO:0005488"],"is_obsolete":false,"name":"receptor antagonist activity","synonyms":[{"name":"receptor ligand activity","type":"broad"}],"termid":"GO:0048019"}


id: FYPO:0007109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is normal (i.e. indistinguishable from wild type during meiotic prometaphase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic centromere clustering during meiotic prometaphase I","synonyms":[{"name":"normal centromere clustering during meiotic prometaphase I","type":"exact"},{"name":"normal chromosome retrieval during meiotic prometaphase I","type":"related"},{"name":"normal kinetochore retrieval during meiotic prometaphase I","type":"related"},{"name":"normal meiotic centromere clustering during prometaphase I","type":"exact"}],"termid":"FYPO:0007109"}


id: GO:0003702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase II transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity (obsolete GO:0003702)","synonyms":[{"name":"RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0003702"}


id: GO:0018659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NADPH + H+ + O2 = protocatechuate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0109","MetaCyc:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate monooxygenase activity","type":"related"},{"name":"4-hydroxybenzoate,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"p-hydroxybenzoate hydrolyase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoate-3-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydrolase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoic hydroxylase activity","type":"related"},{"name":"para-hydroxybenzoate hydroxylase activity","type":"broad"}],"termid":"GO:0018659"}


id: GO:0055059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric neuroblast division","termid":"GO:0055059"}


id: PBO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.2","termid":"PBO:0000837"}


id: PBO:0062847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocrin","termid":"PBO:0062847"}


id: PBO:0041911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBLL1 pseudogene 1","termid":"PBO:0041911"}


id: PBO:0084076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication","termid":"PBO:0084076"}


id: PBO:0084781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peroxiredoxin with thioredoxin peroxidase activity; has a role in reduction of hydroperoxides; reactivation requires Trr2p and glutathione; induced during respiratory growth and oxidative stress; phosphorylated; protein abundance increases in response to DNA replication stress","termid":"PBO:0084781"}


id: PBO:0071640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 4","termid":"PBO:0071640"}


id: PBO:0039002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"afadin, adherens junction formation factor","termid":"PBO:0039002"}


id: PBO:0003843
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.3","termid":"PBO:0003843"}


id: GO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["PMID:10578051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790","GO:0055086","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty-acyl-CoA catabolic process","synonyms":[{"name":"fatty-acyl-CoA breakdown","type":"exact"},{"name":"fatty-acyl-CoA catabolism","type":"exact"},{"name":"fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036115"}


id: PBO:0074200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 10","termid":"PBO:0074200"}


id: GO:0022402
data:
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id: GO:1900400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of iron ion import.","definition_xrefs":["GOC:TermGenie","PMID:18622392","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900400)","synonyms":[{"name":"regulation of iron import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:1900400"}


id: PBO:0068621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 1","termid":"PBO:0068621"}


id: GO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of cell wall invaginations in a synergid cell, similar to those in transfer cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"filiform apparatus","termid":"GO:0043680"}


id: MOD:00901
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-alanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-alanine residue","synonyms":[{"name":"ModAla","type":"exact"}],"termid":"MOD:00901"}


id: PBO:0033760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiosis_I","termid":"PBO:0033760"}


id: GO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}


id: GO:0043099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates a pyrimidine deoxyribonucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside salvage","termid":"GO:0043097"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside biosynthetic process","termid":"GO:0046126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside salvage","termid":"GO:0043099"}


id: GO:0141033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by polymerizing the host filamentous actin. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18331467","PMID:25293534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin polymerization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin polymerization","type":"exact"}],"termid":"GO:0141033"}


id: PBO:0078304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-9","termid":"PBO:0078304"}


id: GO:0036353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of a single ubiquitin group to lysine-119 (H2A- K119) in metazoans, and at the equivalent residue in other organisms.","definition_xrefs":["GOC:sp","PMID:15386022"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K119 monoubiquitination (obsolete GO:0036353)","synonyms":[{"name":"histone H2A monoubiquitination (H2A-K119)","type":"exact"}],"termid":"GO:0036353"}


id: PBO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit","termid":"PBO:0001082"}


id: GO:0070463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of a tubulin dimer to accelerate release of ADP and phosphate.","definition_xrefs":["GOC:mah","PMID:16906148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"tubulin-dependent ATPase activity","synonyms":[{"name":"tubulin-activated ATPase activity","type":"exact"}],"termid":"GO:0070463"}


id: PR:O14142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3G6.05 gene.","definition_xrefs":["UniProtKB:O14142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sym1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.05","synonyms":[{"name":"Spom972h-SPAC3G6.05","type":"exact"}],"termid":"PR:O14142"}


id: PBO:0036103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0036103"}


id: PBO:0048587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 1","termid":"PBO:0048587"}


id: PBO:0067517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 658, pseudogene","termid":"PBO:0067517"}


id: PR:Q9Y7T3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA(His) guanylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(His) guanylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.07","secondary_identifiers":["UniProtKB:Q9Y7T3"],"synonyms":[{"name":"Spom972h-THG1L","type":"exact"},{"name":"tRNA-histidine guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T3"}


id: PBO:0078556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 44","termid":"PBO:0078556"}


id: GO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + vitexin 2''-O-beta-L-rhamnoside = S-adenosyl-L-homocysteine + 7-O-methylvitexin 2''-O-beta-L-rhamnoside.","definition_xrefs":["EC:2.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"vitexin 2''-O-rhamnoside 7-O-methyltransferase activity","secondary_identifiers":["RHEA:11432","MetaCyc:RXN-4981"],"synonyms":[{"name":"S-adenosyl-L-methionine:vitexin-2''-O-beta-L-rhamnoside 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033801"}


id: GO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural plate development","termid":"GO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate morphogenesis","termid":"GO:0001839"}


id: FYPO:0003670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mycophenolic acid. Cells stop growing (and may die) at a concentration of mycophenolic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to mycophenolic acid","synonyms":[{"name":"hypersensitive to mycophenolic acid","type":"exact"},{"name":"sensitive to MPA","type":"exact"},{"name":"sensitive to mycophenolic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to mycophenolic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003670"}


id: PBO:0057633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1208","termid":"PBO:0057633"}


id: PBO:0083123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol-P-Man dependent alpha(1-3) mannosyltransferase; involved in synthesis of dolichol-linked oligosaccharide donor for N-linked glycosylation of proteins; G353A missense mutation in human ortholog ALG3 implicated in carbohydrate deficient glycoprotein syndrome type IV, which is characterized by microcephaly, severe epilepsy, minimal psychomotor development, partial deficiency of sialic acids in serum glycoproteins; wild-type human ALG3 can complement yeast alg3 mutant","termid":"PBO:0083123"}


id: GO:0097182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor Xa (F10); formation of the complex inhibits the serine protease activity of coagulation factor Xa.","definition_xrefs":["PMID:6323392","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor Xa complex","synonyms":[{"name":"PCI-coagulation factor Xa complex","type":"exact"},{"name":"SERPINA5-coagulation factor Xa complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor Xa complex","type":"exact"},{"name":"serpin A5-coagulation factor Xa complex","type":"exact"}],"termid":"GO:0097182"}


id: GO:0005915
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"zonula adherens","secondary_identifiers":["NIF_Subcellular:sao1400623473"],"synonyms":[{"name":"adhesion belt","type":"exact"},{"name":"belt desmosome","type":"exact"},{"name":"intermediate junction","type":"exact"},{"name":"zonula adhaerens","type":"exact"}],"termid":"GO:0005915"}


id: GO:0032821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell proliferation","termid":"GO:0032818"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation involved in immune response","termid":"GO:0032820"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"down regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"down-regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"downregulation of natural killer cell proliferation during immune response","type":"related"},{"name":"inhibition of natural killer cell proliferation during immune response","type":"narrow"},{"name":"negative regulation of NK cell proliferation during immune response","type":"related"},{"name":"negative regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032821"}


id: GO:0060698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of endoribonuclease.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease inhibitor activity","termid":"GO:0008428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0004857","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"endoribonuclease inhibitor activity","termid":"GO:0060698"}


id: PBO:0080618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 54","termid":"PBO:0080618"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:9237682","RESID:AA0271","PubMed:12709052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: GO:0006433
data:
  {"annotated_genes":["SJAG_01259","SJAG_02236"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102098,103300],"is_not":false,"summary":null,"term":"GO:0006433"}]},"cv_name":"biological_process","definition":"The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. The prolyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a methionine-accetping tRNA.","definition_xrefs":["GOC:mah","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01259":null,"SJAG_02236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"prolyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006433","terms_by_termid":{"GO:0006433":null}}


id: GO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"regulates","term_name":"glucose import","termid":"GO:0046323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of glucose import","synonyms":[{"name":"regulation of glucose uptake","type":"exact"}],"termid":"GO:0046324"}


id: FYPO:0002258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"},{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles present in increased numbers","synonyms":[{"name":"fragmented vacuoles","type":"related"},{"name":"small vacuoles present in greater numbers","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size","type":"exact"}],"termid":"FYPO:0002258"}


id: PR:O42878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase C8E11.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.01c","synonyms":[{"name":"Saccharase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC8E11.01c","type":"exact"},{"name":"beta-fructofuranosidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42878"}


id: GO:0102426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin 3-O-beta-D-glucopyranoside + UDP-alpha-D-glucose = myricetin 3-O-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"myricetin-3-O-glucoside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13823"],"termid":"GO:0102426"}


id: PBO:0004529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine (K) and glutamic acid (E) Rich protein","termid":"PBO:0004529"}


id: PBO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 3","termid":"PBO:0050035"}


id: GO:0009838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a body part.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abscission","secondary_identifiers":["Wikipedia:Abscission"],"termid":"GO:0009838"}


id: PR:Q7Z996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pop8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleases P protein subunit pop8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.20","synonyms":[{"name":"Spom972h-pop8","type":"exact"}],"termid":"PR:Q7Z996"}


id: PBO:0072295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 13","termid":"PBO:0072295"}


id: PR:Q9Y815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsv2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein rsv2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.14","synonyms":[{"name":"Spom972h-rsv2","type":"exact"},{"name":"required for stationary phase viability protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y815"}


id: PBO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Fizzy Related","termid":"PBO:0018261"}


id: FYPO:0004085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is decreased during the vegetative growth phase of the life cycle. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"},{"relation_name":"is_a","term_name":"decreased cell growth","termid":"FYPO:0004075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased vegetative cell growth","synonyms":[{"name":"reduced vegetative cell growth","type":"exact"}],"termid":"FYPO:0004085"}


id: PBO:0056155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage enriched lincRNA repressor of IFN-gamma signaling","termid":"PBO:0056155"}


id: GO:1904653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung alveolus development.","definition_xrefs":["PMID:23962064","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung alveolus development","synonyms":[{"name":"regulation of alveolarization","type":"exact"},{"name":"regulation of alveologenesis","type":"exact"}],"termid":"GO:1904653"}


id: PBO:0084654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor orotate phosphoribosyltransferase (OPRTase) isozyme; catalyzes the fifth enzymatic step in the de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate; URA10 has a paralog, URA5, that arose from the whole genome duplication","termid":"PBO:0084654"}


id: FYPO:0004958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondrion differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"altered RNA level in mitochondrion","synonyms":[{"name":"abnormal RNA level in mitochondrion","type":"exact"},{"name":"abnormal RNA level in mitochondrion during vegetative growth","type":"exact"},{"name":"abnormal mitochondrial RNA level","type":"exact"},{"name":"abnormal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"altered RNA level in mitochondrion during mitotic cell cycle","type":"related"},{"name":"altered mitochondrial RNA level","type":"exact"},{"name":"altered transcript level in mitochondrion","type":"exact"}],"termid":"FYPO:0004958"}


id: GO:1903169
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87424,109558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:BHF","GOC:TermGenie","PMID:24125847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion membrane transport","type":"exact"},{"name":"regulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1903169","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0074753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 112","termid":"PBO:0074753"}


id: FYPO:0004608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiotic cell cycle","termid":"FYPO:0006406"},{"relation_name":"output_of","term_name":"abnormal prospore-specific spindle pole body remodeling","termid":"FYPO:0003561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0000121","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiosis II","synonyms":[{"name":"abnormal SPB morphology during meiosis II","type":"exact"},{"name":"abnormal spindle pole body morphology during second meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body structure during meiosis II","type":"narrow"}],"termid":"FYPO:0004608"}


id: PBO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 4","termid":"PBO:0060684"}


id: GO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP catabolic process (obsolete GO:0030829)","synonyms":[{"name":"regulation of cGMP breakdown","type":"exact"},{"name":"regulation of cGMP catabolism","type":"exact"},{"name":"regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030829"}


id: PATO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000535 salt sensitivity value (obsolete PATO:0000535)","termid":"PATO:0000535"}


id: PBO:0080241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 4","termid":"PBO:0080241"}


id: GO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate = ADP + acetyl phosphate.","definition_xrefs":["EC:2.7.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acetate kinase activity","secondary_identifiers":["MetaCyc:ACETATEKIN-RXN","RHEA:11352"],"synonyms":[{"name":"AK activity","type":"related"},{"name":"ATP:acetate phosphotransferase activity","type":"related"},{"name":"AckA","type":"related"},{"name":"acetate kinase (phosphorylating) activity","type":"related"},{"name":"acetic kinase activity","type":"related"},{"name":"acetokinase activity","type":"related"}],"termid":"GO:0008776"}


id: FYPO:0003125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translational initiation in the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytoplasmic translational initiation","synonyms":[{"name":"decreased cytoplasmic translation initiation","type":"exact"},{"name":"decreased cytoplasmic translational initiation during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translational initiation during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translational initiation","type":"exact"}],"termid":"FYPO:0003125"}


id: PBO:0091994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase","termid":"PBO:0091994"}


id: PBO:0090044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4","termid":"PBO:0090044"}


id: FYPO:0001185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an alpha-glucosidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased alpha-glucosidase activity","synonyms":[{"name":"reduced alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001185"}


id: PBO:0049184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 1","termid":"PBO:0049184"}


id: PBO:0051904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 11","termid":"PBO:0051904"}


id: PBO:0042215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L2 pseudogene 1","termid":"PBO:0042215"}


id: PBO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0000728"}


id: GO:0097484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single dendrite involved in cellular development.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite extension","termid":"GO:0097484"}


id: PBO:0053833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1098","termid":"PBO:0053833"}


id: PBO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B","termid":"PBO:0039714"}


id: PBO:0078659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 12-1","termid":"PBO:0078659"}


id: GO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of achromobactin, a citrate siderophore, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:10928541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"achromobactin transport","termid":"GO:0042935"}


id: GO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-methionine = S-adenosyl-L-homocysteine + S-methyl-L-methionine.","definition_xrefs":["EC:2.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"methionine S-methyltransferase activity","secondary_identifiers":["MetaCyc:METHIONINE-S-METHYLTRANSFERASE-RXN","RHEA:13761"],"synonyms":[{"name":"S-adenosyl methionine:methionine methyl transferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-methionine S-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-methionine methyltransferase activity","type":"related"},{"name":"methionine methyltransferase activity","type":"related"}],"termid":"GO:0030732"}


id: PBO:0027696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_cytoplasmic_microtubules","termid":"PBO:0027696"}


id: PBO:0068004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 306","termid":"PBO:0068004"}


id: PBO:0056238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI family member, X-linked","termid":"PBO:0056238"}


id: PBO:0054913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2327","termid":"PBO:0054913"}


id: GO:0170057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of an RNA with 3'-phosphate or 2',3'-cyclic-phosphate ends to an RNA with 5'-hydroxy ends according to either (i) a 3'-end 3'-phospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + GTP = a ribonucleotidyl-ribonucleotide-RNA + diphosphate + GMP; or (ii) a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + GTP + H2O = a ribonucleotidyl-ribonucleotide-RNA + diphosphate + GMP + H+.","definition_xrefs":["EC:6.5.1.8","PMID:21311021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA ligase activity","termid":"GO:0008452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"RNA ligase (GTP) activity","synonyms":[{"name":"3'-phosphate/5'-hydroxy nucleic acid ligase activity","type":"exact"}],"termid":"GO:0170057"}


id: PBO:0045019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 2A","termid":"PBO:0045019"}


id: GO:0002029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that stops, prevents, or reduces the frequency, rate or extent of G protein-coupled receptor signaling pathway after prolonged stimulation with an agonist of the pathway.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"desensitization of G protein-coupled receptor signaling pathway","synonyms":[{"name":"desensitisation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"desensitization of G-protein coupled receptor protein signaling pathway","type":"exact"}],"termid":"GO:0002029"}


id: GO:0097722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of a sperm cell.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm motility","synonyms":[{"name":"sperm movement","type":"exact"}],"termid":"GO:0097722"}


id: PBO:0053579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 602","termid":"PBO:0053579"}


id: GO:0004800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2.","definition_xrefs":["EC:1.21.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thyroxine 5'-deiodinase activity","secondary_identifiers":["MetaCyc:THYROXINE-DEIODINASE-RXN","RHEA:19745","Reactome:R-HSA-350869","Reactome:R-HSA-209772"],"synonyms":[{"name":"L-thyroxine iodohydrolase (reducing) activity","type":"related"},{"name":"acceptor:3,5,3'-triiodo-L-thyronine oxidoreductase (iodinating)","type":"related"},{"name":"diiodothyronine 5'-deiodinase activity","type":"related"},{"name":"iodothyronine 5'-deiodinase activity","type":"related"},{"name":"iodothyronine outer ring monodeiodinase activity","type":"related"},{"name":"outer ring-deiodinating pathway","type":"exact"},{"name":"thyroxine 5' deiodinase activity","type":"exact"},{"name":"thyroxine deiodinase activity","type":"broad"},{"name":"type I iodothyronine deiodinase activity","type":"narrow"},{"name":"type II iodothyronine deiodinase activity","type":"narrow"}],"termid":"GO:0004800"}


id: SOFP:chromosome
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Name of chromosome the feature occurs on(?)","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome","termid":"SOFP:chromosome"}


id: FYPO:0007542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of double-stranded DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal double-stranded DNA binding","synonyms":[{"name":"normal dsDNA binding","type":"exact"}],"termid":"FYPO:0007542"}


id: GO:1903630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aminoacyl-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:2280766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aminoacyl-tRNA ligase activity","synonyms":[{"name":"regulation of aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"}],"termid":"GO:1903630"}


id: GO:0075525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF.","definition_xrefs":["GOC:bf","PMID:18824510","GOC:ch","GOC:jl","PMID:18631147","VZ:858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational termination-reinitiation","synonyms":[{"name":"termination reinitiation involved in viral translation","type":"exact"},{"name":"viral translation involving termination re-initiation","type":"exact"},{"name":"viral translation involving termination-reinitiation","type":"exact"},{"name":"viral translation involving translational stop-start","type":"exact"}],"termid":"GO:0075525"}


id: GO:0045763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amino acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"negatively_regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular amino acid metabolic process","synonyms":[{"name":"down regulation of amino acid metabolic process","type":"exact"},{"name":"down-regulation of amino acid metabolic process","type":"exact"},{"name":"downregulation of amino acid metabolic process","type":"exact"},{"name":"inhibition of amino acid metabolic process","type":"narrow"},{"name":"negative regulation of amino acid metabolism","type":"exact"}],"termid":"GO:0045763"}


id: PBO:0027706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_processivity_factor_activity","termid":"PBO:0027706"}


id: SO:0001645
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A measurable sequence feature that varies within a population.","definition_xrefs":["SO:db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetic_marker","synonyms":[{"name":"genetic marker","type":"related"}],"termid":"SO:0001645"}


id: PBO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 28 pseudogene","termid":"PBO:0062149"}


id: PBO:0084354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase; reduces intracellular ROS, contributes to L-proline analog resistance and tolerance to ethanol and freezing; member of N-acetyltransferase superfamily; not found in S288C, present in strains with Sigma1278b background; located on left arm of Chr X ~ 15 kb from telomere; identical to MPR1 except for one base at position 254, leading to Gly at position 85 in MPR1 and Glu in MPR2; present also in Japanese industrial baker's yeast","termid":"PBO:0084354"}


id: PBO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involucrin","termid":"PBO:0051969"}


id: GO:0019441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"kynurenine metabolic process","termid":"GO:0070189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"tryptophan catabolic process to kynurenine","secondary_identifiers":["MetaCyc:TRPKYNCAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to kynurenine","type":"exact"},{"name":"tryptophan degradation to kynurenine","type":"exact"}],"termid":"GO:0019441"}


id: GO:0000183
data:
  {"annotated_genes":["SJAG_01075","SJAG_01579","SJAG_00883","SJAG_02723","SJAG_00934","SJAG_03844","SJAG_03982","SJAG_02778"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88277,100279,103424,104353,108303,109490,110607],"is_not":false,"summary":null,"term":"GO:0000183"},{"annotations":[102836],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin at ribosomal DNA, characterized by the modified histone H3K9me3.","definition_xrefs":["PMID:10219245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rDNA chromatin silencing","type":"broad"},{"name":"chromatin silencing at rDNA","type":"related"},{"name":"chromatin silencing at ribosomal DNA","type":"broad"},{"name":"heterochromatic silencing at rDNA","type":"broad"},{"name":"rDNA heterochromatin assembly","type":"exact"}],"termid":"GO:0000183","terms_by_termid":{"GO:0000183":null,"GO:0061188":null}}


id: GO:1903871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA recombinase mediator complex.","definition_xrefs":["PMID:18347097","GO_REF:0000079","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"DNA recombinase mediator complex assembly","synonyms":[{"name":"DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903871"}


id: GO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + terephthalate = (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+.","definition_xrefs":["EC:1.14.12.15","RHEA:10312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"terephthalate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.12.15-RXN","UM-BBD_reactionID:r0150","KEGG_REACTION:R05148"],"synonyms":[{"name":"1,4-dicarboxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018628"}


id: PBO:0090170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf12","termid":"PBO:0090170"}


id: PBO:0085946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; not an essential gene; YLR413W has a paralog, FAT3, that arose from the whole genome duplication","termid":"PBO:0085946"}


id: PR:P0CT64
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1601 gene.","definition_xrefs":["UniProtKB:P0CT64","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.14","synonyms":[{"name":"Spom972h-rps1601","type":"exact"}],"termid":"PR:P0CT64"}


id: GO:0097302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which diacylglyceryl transfer leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["GOC:pde","GOC:yaf","UniPathway:UPA00664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein biosynthetic process","termid":"GO:0042158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"lipoprotein biosynthetic process via diacylglyceryl transfer","synonyms":[{"name":"lipoprotein biosynthesis (diacylglyceryl transfer)","type":"exact"}],"termid":"GO:0097302"}


id: GO:0047251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylthioacetohydroximate + UDP-D-glucose = desulfoglucotropeolin + UDP.","definition_xrefs":["MetaCyc:2.4.1.195-RXN","EC:2.4.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"thiohydroximate beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:13757"],"synonyms":[{"name":"N-hydroxythioamide S-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-hydroxy-2-phenylethanethioamide S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:thiohydroximate S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:thiohydroximate glucosyltransferase activity","type":"related"},{"name":"desulfoglucosinolate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"thiohydroximate S-glucosyltransferase activity","type":"related"},{"name":"thiohydroximate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-thiohydroximate glucosyltransferase activity","type":"related"}],"termid":"GO:0047251"}


id: PATO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000143 addictive substance (obsolete PATO:0000143)","termid":"PATO:0000143"}


id: GO:0035127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic limb morphogenesis","termid":"GO:0035127"}


id: PBO:0075247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 17","termid":"PBO:0075247"}


id: SO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for an piwi associated RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piRNA_gene","synonyms":[{"name":"piRNA gene","type":"exact"}],"termid":"SO:0001638"}


id: GO:0035967
data:
  {"annotated_genes":["SJAG_01556","SJAG_02419","SJAG_02341","SJAG_00552","SJAG_01516","SJAG_00226","SJAG_01768","SJAG_00054","SJAG_04612","SJAG_00270","SJAG_05022","SJAG_04187","SJAG_04435","SJAG_04471","SJAG_00530","SJAG_00173","SJAG_03841","SJAG_03482","SJAG_04283","SJAG_00403","SJAG_03815","SJAG_04567","SJAG_01160","SJAG_00790","SJAG_00564","SJAG_04103","SJAG_03345","SJAG_00219","SJAG_03611","SJAG_01737","SJAG_03657","SJAG_00681","SJAG_04118","SJAG_02601","SJAG_04262"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108484,84327,100395,101389,106202,106203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[99113,106205,106204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[105844,104195,106529,105946,109819],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[89146,94903,110395,113385,113539,105768,112957,110263,112209,90693,85892,97418,103363,110006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[85493,84051,99598,109180],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[89292,85741],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[84581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"},{"annotations":[86643,107051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein that is not folded in its correct three-dimensional structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"},{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00226":null,"SJAG_00270":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00552":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01160":null,"SJAG_01516":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_01768":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02601":null,"SJAG_03345":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04187":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to topologically incorrect protein","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to misfolded or unfolded protein","type":"related"}],"termid":"GO:0035967","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null,"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: PBO:0056163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1","termid":"PBO:0056163"}


id: GO:0033250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a penicillin + H2O = a substituted beta-amino acid derivative of the penicillin.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactamase activity","termid":"GO:0008800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"penicillinase activity","secondary_identifiers":["MetaCyc:BETA-LACTAMASE-RXN"],"termid":"GO:0033250"}


id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: PR:Q9P7N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20902:SF0","PRO:DNx","OMA:SCHPO03727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.05","secondary_identifiers":["UniProtKB:Q9P7N9"],"synonyms":[{"name":"Spom972h-TRAPPC5","type":"exact"},{"name":"TRAPP subunit trs31 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N9"}


id: PBO:0087281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shuttling pre-60S factor; involved in the biogenesis of ribosomal large subunit; interacts directly with Arx1p; responsible for Tif6p recycling defects in absence of Rei1p","termid":"PBO:0087281"}


id: PBO:0077205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 20","termid":"PBO:0077205"}


id: PBO:0041145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 4","termid":"PBO:0041145"}


id: PBO:0017966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 gamma subunit","termid":"PBO:0017966"}


id: GO:0043005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection","secondary_identifiers":["NIF_Subcellular:sao867568886"],"synonyms":[{"name":"nerve fiber","type":"related"},{"name":"neurite","type":"narrow"},{"name":"neuron process","type":"exact"},{"name":"neuron protrusion","type":"exact"},{"name":"neuronal cell projection","type":"exact"}],"termid":"GO:0043005"}


id: PBO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate kinase (predicted)","termid":"PBO:0000593"}


id: GO:0050943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of iridophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iridophore differentiation","termid":"GO:0050937"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"iridophore differentiation","termid":"GO:0050935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of iridophore differentiation","synonyms":[{"name":"down regulation of iridophore differentiation","type":"exact"},{"name":"down-regulation of iridophore differentiation","type":"exact"},{"name":"downregulation of iridophore differentiation","type":"exact"},{"name":"inhibition of iridophore differentiation","type":"narrow"}],"termid":"GO:0050943"}


id: FYPO:0003966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to salt stress","synonyms":[{"name":"increased protein accumulation during cellular response to salt stress","type":"related"},{"name":"increased protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003966"}


id: FYPO:0005471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate synthase activity using NADH as a cofactor is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate synthase (NADH) activity","termid":"FYPO:0005470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abolished glutamate synthase (NADH) activity","synonyms":[{"name":"abolished L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abolished NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abolished NADH: GOGAT activity","type":"related"},{"name":"abolished glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"},{"name":"glutamate synthase (NADH) activity abolished","type":"exact"}],"termid":"FYPO:0005471"}


id: GO:0102677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + campesterol + O2 + NADPH = (22S)-22-hydroxycampesterol + H2O + NADP.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"campesterol,NADPH:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-4225"],"termid":"GO:0102677"}


id: GO:0072576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the liver are generated and organized.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver morphogenesis","termid":"GO:0072576"}


id: GO:2001268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043154"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","termid":"GO:2001267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","synonyms":[{"name":"negative regulation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"negative regulation of initiator caspase activity","type":"narrow"}],"termid":"GO:2001268"}


id: RO:HOM0000010
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that is detected by similarity in content and organization between chromosomes.","definition_xrefs":["MeSH:Synteny"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_homology_relationship_with","synonyms":[{"name":"syntenic homologous to","type":"exact"},{"name":"synteny","type":"related"}],"termid":"RO:HOM0000010"}


id: PBO:0028733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynine_level_during_vegetative_growth","termid":"PBO:0028733"}


id: PBO:0030406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Glc3Man9GlcNAc_absent_from_cell","termid":"PBO:0030406"}


id: GO:0015369
data:
  {"annotated_genes":["SJAG_04698","SJAG_04028","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86925,87409,94525,111735],"is_not":false,"summary":null,"term":"GO:0015369"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in).","definition_xrefs":["TC:2.A.19.2.-","RHEA:71799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04028":null,"SJAG_04096":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"calcium:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8949687"],"synonyms":[{"name":"calcium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015369","terms_by_termid":{"GO:0015369":null}}


id: PBO:0027720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_acetylation","termid":"PBO:0027720"}


id: PBO:0081619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 548","termid":"PBO:0081619"}


id: PBO:0017866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug168","termid":"PBO:0017866"}


id: GO:0071389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mineralocorticoid stimulus. Mineralocorticoids are hormonal C21 corticosteroids synthesized from cholesterol and characterized by their similarity to aldosterone. Mineralocorticoids act primarily on water and electrolyte balance.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"}


id: PBO:0110351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX8C pseudogene 1","termid":"PBO:0110351"}


id: GO:0034914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trinitrophenol hydride Meisenheimer complex = 2,4-dinitrophenol + nitrite. Trinitrophenol is also known as TNP.","definition_xrefs":["UM-BBD_reactionID:r1448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trinitrophenol hydride denitratase activity","secondary_identifiers":["EC:1.7.99.-"],"synonyms":[{"name":"2,4,6-trinitrophenol hydride denitratase activity","type":"exact"},{"name":"TNP hydride denitratase activity","type":"exact"}],"termid":"GO:0034914"}


id: PBO:0029970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_mitotic_cell_cycle","termid":"PBO:0029970"}


id: PBO:0041543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 107","termid":"PBO:0041543"}


id: PBO:0076909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 1","termid":"PBO:0076909"}


id: PBO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin opposite strand/antisense RNA","termid":"PBO:0048601"}


id: GO:0034594
data:
  {"annotated_genes":["SJAG_00063","SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[104496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol trisphosphate + H2O = phosphatidylinositol bisphosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol trisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034594","terms_by_termid":{"GO:0016314":null,"GO:0034485":null}}


id: PBO:0088442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase","termid":"PBO:0088442"}


id: PBO:0077062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 8","termid":"PBO:0077062"}


id: GO:1902888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an astral microtubule.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000087","PMID:16054030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to astral microtubule","synonyms":[{"name":"protein localisation in astral microtubule","type":"exact"},{"name":"protein localisation to astral microtubule","type":"exact"},{"name":"protein localization in astral microtubule","type":"exact"}],"termid":"GO:1902888"}


id: PBO:0070394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORA antisense RNA 1","termid":"PBO:0070394"}


id: PBO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 39 subfamily A member 1","termid":"PBO:0044488"}


id: PBO:0111741
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family","termid":"PBO:0111741"}


id: GO:2000003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle checkpoint","termid":"GO:1901978"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"positively_regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of DNA damage checkpoint","synonyms":[{"name":"positive regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000003"}


id: GO:0009356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses 4-amino-4-deoxychorismate synthase activity.","definition_xrefs":["PMID:2251281","PMID:7592344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"aminodeoxychorismate synthase complex","synonyms":[{"name":"4-amino-4-deoxychorismate synthase complex","type":"related"},{"name":"ADC synthase complex","type":"exact"},{"name":"p-aminobenzoate synthetase complex","type":"related"}],"termid":"GO:0009356"}


id: PBO:0074151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1","termid":"PBO:0074151"}


id: GO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the phloem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via phloem (obsolete GO:0023068)","synonyms":[{"name":"signal transmission via phloem","type":"exact"}],"termid":"GO:0023068"}


id: PBO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates sdh41","termid":"PBO:0001370"}


id: FYPO:0002417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores and germinated spores with elongated germ tubes. The elongated cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and germinated spores with elongated germ tubes (obsolete FYPO:0002417)","termid":"FYPO:0002417"}


id: PBO:0039786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12B","termid":"PBO:0039786"}


id: PBO:0050122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 32","termid":"PBO:0050122"}


id: GO:0042255
data:
  {"annotated_genes":["SJAG_04669","SJAG_01296","SJAG_02508","SJAG_02868","SJAG_01839","SJAG_04066","SJAG_02840","SJAG_04847","SJAG_02335","SJAG_04180","SJAG_03617","SJAG_02803","SJAG_03846","SJAG_02759","SJAG_01811","SJAG_02479","SJAG_00513","SJAG_05679","SJAG_04940","SJAG_01548","SJAG_03012","SJAG_03155","SJAG_01122","SJAG_01568","SJAG_01454","SJAG_02952","SJAG_03424","SJAG_03466","SJAG_00722","SJAG_00323","SJAG_03080","SJAG_03496","SJAG_03458","SJAG_02830","SJAG_02535","SJAG_01339","SJAG_05248","SJAG_04992","SJAG_00949","SJAG_02184","SJAG_04492","SJAG_04004","SJAG_04599","SJAG_03798","SJAG_00523","SJAG_04998","SJAG_04524","SJAG_01606","SJAG_02754","SJAG_04108","SJAG_02427","SJAG_02390","SJAG_04746","SJAG_03773","SJAG_01169","SJAG_01420","SJAG_02477","SJAG_03666","SJAG_00572","SJAG_00689","SJAG_04176","SJAG_01161","SJAG_02340","SJAG_00841","SJAG_00882","SJAG_04395","SJAG_04304","SJAG_02749","SJAG_02436"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104900],"is_not":false,"summary":null,"term":"GO:0042255"},{"annotations":[112832,111948,105206,99696,102182,94174,96913,96584,103624,98703,85853,96769,95365,109093,111949,88593,89404,108336,112345,89012,107005,107632,115032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[98087,111531,112756,106935,112755,100318,111530,88299,91032,100467,100240,93266,100987,101393,106934,94175,95639,98088,98704,83904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[92069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042256"},{"annotations":[104576],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[108183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061668"},{"annotations":[98667,113922,99863,111823,93676,98666,114328,97389,93677,111890,89566,101734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"},{"annotations":[100050,73976,97915,107808,107807,101853,107603,102990,86107,93616,108271,107806,101854,93615,97913,92767,107604,107972,90955,112615,114749,97914,102991,96646],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[103814,109269],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the mature ribosome and of its subunits.","definition_xrefs":["PMID:30467428","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00323":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00572":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01169":null,"SJAG_01296":null,"SJAG_01339":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01548":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02184":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02390":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02749":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02803":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03155":null,"SJAG_03424":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03617":null,"SJAG_03666":null,"SJAG_03773":null,"SJAG_03798":null,"SJAG_03846":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04746":null,"SJAG_04847":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_04998":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"ribosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0042257"],"synonyms":[{"name":"ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0042255","terms_by_termid":{"GO:0000027":null,"GO:0000028":null,"GO:0034462":null,"GO:0042255":null,"GO:0042256":null,"GO:0061668":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: GO:0140140
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111329],"is_not":false,"summary":null,"term":"GO:0140140"}]},"cv_name":"biological_process","definition":"The process in which a guanine nucleotide is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:vw","PMID:14998997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine transmembrane transport","termid":"GO:1903716"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrial guanine nucleotide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140140","terms_by_termid":{"GO:0140140":null}}


id: GO:0061685
data:
  {"annotated_genes":["SJAG_04846"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111897],"is_not":false,"summary":null,"term":"GO:0061685"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphthine methyl ester + H2O = diphthine + H+ + methanol.","definition_xrefs":["GOC:dph","PMID:24739148","RHEA:42656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"diphthine methylesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.1.97"],"termid":"GO:0061685","terms_by_termid":{"GO:0061685":null}}


id: PBO:0063310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCGF3 antisense RNA 1","termid":"PBO:0063310"}


id: PATO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's disposition to lose an entitity by natural process.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shedability","termid":"PATO:0001729"}


id: PR:Q9Y810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23427:SF2","OMA:SCHPO02894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome oxidase assembly protein shy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1215.01","secondary_identifiers":["UniProtKB:Q9Y810"],"synonyms":[{"name":"SURF1-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SURF1","type":"exact"}],"termid":"PR:Q9Y810"}


id: PBO:0046606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 8","termid":"PBO:0046606"}


id: PBO:0049797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 3","termid":"PBO:0049797"}


id: SO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron","synonyms":[{"name":"inside intron","type":"exact"}],"termid":"SO:0000069"}


id: PBO:0066728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 25","termid":"PBO:0066728"}


id: GO:0031406
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to a carboxylic acid, an organic acid containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"carboxylic acid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031406","terms_by_termid":{"GO:0016594":null}}


id: PBO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 23","termid":"PBO:0072053"}


id: PR:Q10102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.01c gene.","definition_xrefs":["UniProtKB:Q10102","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.01c","synonyms":[{"name":"Spom972h-SPAC18G6.01c","type":"exact"}],"termid":"PR:Q10102"}


id: GO:1903570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein kinase D signaling.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:20497126","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein kinase D signaling (obsolete GO:1903570)","synonyms":[{"name":"regulation of PKD signal transduction","type":"exact"},{"name":"regulation of PKD signaling cascade","type":"related"},{"name":"regulation of protein kinase D signal transduction","type":"exact"},{"name":"regulation of protein kinase D signaling cascade","type":"related"},{"name":"regulation of protein kinase D signalling cascade","type":"related"}],"termid":"GO:1903570"}


id: PBO:0041408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 141","termid":"PBO:0041408"}


id: GO:2000975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"positively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-B cell differentiation","synonyms":[{"name":"positive regulation of pro-B cell development","type":"related"},{"name":"positive regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000975"}


id: GO:0070916
data:
  {"annotated_genes":["SJAG_03015","SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91341,93696],"is_not":false,"summary":null,"term":"GO:0070916"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses inositol phosphoceramide synthase activity and contains a catalytic subunit and a regulatory subunit (Aur1p and Kei1p, respectively, in Saccharomyces).","definition_xrefs":["PMID:19726565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"inositol phosphoceramide synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPC synthase complex","type":"exact"}],"termid":"GO:0070916","terms_by_termid":{"GO:0070916":null}}


id: PBO:0050634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 4","termid":"PBO:0050634"}


id: PBO:0053122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 15","termid":"PBO:0053122"}


id: GO:0099506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicles along actin filaments within a cell, powered by molecular motors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along actin filament","termid":"GO:0030050"},{"relation_name":"is_a","term_name":"synaptic vesicle cytoskeletal transport","termid":"GO:0099514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle transport along actin filament","termid":"GO:0099506"}


id: PBO:0043793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylation element binding protein 4","termid":"PBO:0043793"}


id: PBO:0091618
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homologous PM factor","termid":"PBO:0091618"}


id: SO:1000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000121 sequence_variant_causing_polypeptide_localization_change (obsolete SO:1000121)","synonyms":[{"name":"mutation causing polypeptide localization change","type":"related"},{"name":"sequence variant causing polypeptide localization change","type":"exact"}],"termid":"SO:1000121"}


id: GO:0032153
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division site","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"synonyms":[{"name":"cell division plane","type":"exact"}],"termid":"GO:0032153","terms_by_termid":{"GO:0000085":null,"GO:0000923":null,"GO:0000935":null,"GO:0000936":null,"GO:0005826":null,"GO:0031097":null,"GO:0032153":null,"GO:0032154":null,"GO:0032169":null,"GO:0032178":null,"GO:0036391":null,"GO:0051325":null,"GO:0051329":null,"GO:0071341":null,"GO:0090689":null,"GO:0110085":null,"GO:0110115":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null,"GO:1990753":null}}


id: PBO:0049077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 108","termid":"PBO:0049077"}


id: PBO:0085499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein anchored to mitochondrial inner membrane; may have a redundant function with Sco1p in delivery of copper to cytochrome c oxidase; interacts with Cox2p; SCO2 has a paralog, SCO1, that arose from the whole genome duplication","termid":"PBO:0085499"}


id: PBO:0065886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB34, member RAS oncogene family","termid":"PBO:0065886"}


id: PBO:0029351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydroxyurea","termid":"PBO:0029351"}


id: PBO:0076839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 6","termid":"PBO:0076839"}


id: GO:1900971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sarcinapterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin metabolic process","termid":"GO:1900968"},{"relation_name":"regulates","term_name":"sarcinapterin biosynthetic process","termid":"GO:1900868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0042559","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of sarcinapterin biosynthetic process","synonyms":[{"name":"regulation of sarcinapterin anabolism","type":"exact"},{"name":"regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"regulation of sarcinapterin formation","type":"exact"},{"name":"regulation of sarcinapterin synthesis","type":"exact"}],"termid":"GO:1900971"}


id: PBO:0065565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 5","termid":"PBO:0065565"}


id: PBO:0053545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 551","termid":"PBO:0053545"}


id: GO:1900700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"positively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"activation of o-orsellinic acid anabolism","type":"exact"},{"name":"activation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"activation of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"activation of o-orsellinic acid formation","type":"exact"},{"name":"activation of o-orsellinic acid synthesis","type":"exact"},{"name":"positive regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"positive regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"positive regulation of o-orsellinic acid formation","type":"exact"},{"name":"positive regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"up regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"up regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"up regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"up regulation of o-orsellinic acid formation","type":"exact"},{"name":"up regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"up-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"up-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"up-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"up-regulation of o-orsellinic acid formation","type":"exact"},{"name":"up-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"upregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"upregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"upregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"upregulation of o-orsellinic acid formation","type":"exact"},{"name":"upregulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900700"}


id: PBO:0061783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occludin","termid":"PBO:0061783"}


id: PBO:0039705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apelin receptor","termid":"PBO:0039705"}


id: PBO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"external_link","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT overexpression expression profiling","termid":"PBO:0018154"}


id: PBO:0062421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 66 pseudogene","termid":"PBO:0062421"}


id: GO:0102179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-ethylidenelophenol + NADH + O2 + H+ = 4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"24-ethylidenelophenol 4alpha-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11935","RHEA:59032"],"termid":"GO:0102179"}


id: GO:0042718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete structures that partition the water-insoluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed.","definition_xrefs":["PMID:18046696","PMID:6337890","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"yolk","termid":"GO:0060417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"yolk granule","termid":"GO:0042718"}


id: GO:0021788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:14699587","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in neural tube","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in neural tube","type":"exact"}],"termid":"GO:0021788"}


id: GO:0032077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of deoxyribonuclease activity","termid":"GO:0032070"},{"relation_name":"is_a","term_name":"positive regulation of nuclease activity","termid":"GO:0032075"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of deoxyribonuclease activity","synonyms":[{"name":"DNase activator","type":"related"},{"name":"activation of deoxyribonuclease activity","type":"narrow"},{"name":"deoxyribonuclease activator","type":"related"},{"name":"stimulation of deoxyribonuclease activity","type":"narrow"},{"name":"up regulation of deoxyribonuclease activity","type":"exact"},{"name":"up-regulation of deoxyribonuclease activity","type":"exact"},{"name":"upregulation of deoxyribonuclease activity","type":"exact"}],"termid":"GO:0032077"}


id: GO:0051927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051927)","synonyms":[{"name":"down regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"down-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"downregulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"inhibition of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"negative regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of calcium transport via voltage gated calcium channel","type":"related"}],"termid":"GO:0051927"}


id: PBO:0045050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 cilia and flagella associated protein","termid":"PBO:0045050"}


id: PBO:0109514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCP nuclear cofactor family member 1","termid":"PBO:0109514"}


id: PBO:0074389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle induced lncRNA, enhancer of proliferation","termid":"PBO:0074389"}


id: PR:000050521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein scr1 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Ser-235, Ser-332, Ser-333, Ser-408, and Ser-410 of the amino acid sequence represented by UniProtKB:O14335. Example: UniProtKB:O14335, Ser-235/Ser-332/Ser-333/Ser-408/Ser-410, PR:000026291.","definition_xrefs":["PMID:22140232","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding protein scr1 (Schizosaccharomyces pombe)","termid":"PR:000050519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scr1/UnPhos:(S236,S332,S333,S408,S410)","pombase_gene_id":"SPBC1D7.02c","synonyms":[{"name":"Spom-scr1/Phos:1","type":"exact"},{"name":"UniProtKB:O14335, Ser-235/Ser-332/Ser-333/Ser-408/Ser-410, PR:000026291","type":"narrow"},{"name":"scr1/UnPhos:(S236,S332,S333,S408,S410)","type":"exact"}],"termid":"PR:000050521"}


id: PBO:0028775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitinyl_hydrolase_activity","termid":"PBO:0028775"}


id: GO:1990204
data:
  {"annotated_genes":["SJAG_02901","SJAG_04677","SJAG_MIT03","SJAG_01671","SJAG_00755","SJAG_03861","SJAG_03920","SJAG_01763","SJAG_02464","SJAG_01012","SJAG_02006","SJAG_00885","SJAG_02646","SJAG_00601","SJAG_00866","SJAG_01490","SJAG_03490","SJAG_01402","SJAG_04665","SJAG_04675","SJAG_07006","SJAG_00409","SJAG_03064","SJAG_00080","SJAG_03290","SJAG_02158","SJAG_00260","SJAG_03641","SJAG_06382","SJAG_03163","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62343,68160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009331"},{"annotations":[92600,84913,109221,83671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005960"},{"annotations":[88652,88656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[109389,85415,112933,85050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005749"},{"annotations":[113831,114296,111275,100263,115185,100668,86200,104150,109595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005750"},{"annotations":[83674,108262,102918,106327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[83675,110422,91201,95216,104787,114597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045254"},{"annotations":[88640,103447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005971"}]},"cv_name":"cellular_component","definition":"Any protein complex that possesses oxidoreductase activity.","definition_xrefs":["PMID:18982432","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00409":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00866":null,"SJAG_00885":null,"SJAG_01012":null,"SJAG_01402":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02398":null,"SJAG_02464":null,"SJAG_02646":null,"SJAG_02901":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03490":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03920":null,"SJAG_04665":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_06382":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"oxidoreductase complex","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidation-reduction complex","type":"exact"},{"name":"redox complex","type":"exact"}],"termid":"GO:1990204","terms_by_termid":{"GO:0005749":null,"GO:0005750":null,"GO:0005960":null,"GO:0005971":null,"GO:0009331":null,"GO:0033573":null,"GO:0045252":null,"GO:0045254":null}}


id: PBO:0041255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 198","termid":"PBO:0041255"}


id: PBO:0088944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Fhl1","termid":"PBO:0088944"}


id: PBO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp9","termid":"PBO:0004267"}


id: PBO:0065125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D3","termid":"PBO:0065125"}


id: GO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plays a role in regulating transcription initiation.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription initiation factor activity (obsolete GO:0016986)","synonyms":[{"name":"transcription initiation factor activity","type":"exact"},{"name":"transcriptional initiation factor activity","type":"exact"}],"termid":"GO:0016986"}


id: GO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.","definition_xrefs":["PMID:11756452","PMID:11713266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"methylosome","synonyms":[{"name":"20S methylosome","type":"exact"},{"name":"20S methyltransferase complex","type":"exact"}],"termid":"GO:0034709"}


id: PR:Q9URZ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-L-isoaspartate(D-aspartate) O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11579:SF0","OMA:SCHPO02279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.08","secondary_identifiers":["UniProtKB:Q9URZ1"],"synonyms":[{"name":"L-isoaspartyl protein carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCMT1","type":"exact"},{"name":"protein L-isoaspartyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-beta-aspartate methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ1"}


id: GO:0009717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"isoflavonoid metabolic process","termid":"GO:0046287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoflavonoid biosynthetic process","synonyms":[{"name":"isoflavonoid anabolism","type":"exact"},{"name":"isoflavonoid biosynthesis","type":"exact"},{"name":"isoflavonoid formation","type":"exact"},{"name":"isoflavonoid synthesis","type":"exact"}],"termid":"GO:0009717"}


id: PBO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 11 pseudogene","termid":"PBO:0062156"}


id: PBO:0085487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Profilin; binds actin, phosphatidylinositol 4,5-bisphosphate, and polyproline regions; involved in cytoskeleton organization; required for normal timing of actin polymerization in response to thermal stress; protein abundance increases in response to DNA replication stress; highly conserved protein; human PFN1 (profilin 1) complements temperature sensitive pfy1 mutants, PFN1 mutations are a rare cause of ALS","termid":"PBO:0085487"}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[115468,115469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["PomBase:mah","GO:0000920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444","SJAG_02252","SJAG_03143"],"single_locus_genotype_uniquenames":["agn1delta","ace2delta","sep1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0051085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assisting in the correct posttranslational noncovalent assembly of proteins, which is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' post-translational protein folding","termid":"GO:0051084"},{"relation_name":"is_a","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0006457","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chaperone cofactor-dependent protein refolding","secondary_identifiers":["GO:0070389"],"synonyms":[{"name":"chaperone co-factor-dependent protein folding","type":"related"},{"name":"chaperone co-factor-dependent protein refolding","type":"exact"},{"name":"chaperone cofactor-dependent 'de novo' protein folding","type":"exact"},{"name":"chaperone cofactor-dependent protein folding","type":"exact"},{"name":"chaperone mediated protein folding requiring cofactor","type":"related"}],"termid":"GO:0051085"}


id: FYPO:0002519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell cycle arrest that normally occurs in response to mitotic G2/M transition cell cycle checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished response to mitotic G2/M transition checkpoint signaling","synonyms":[{"name":"abolished mitotic G2/M transition arrest","type":"related"},{"name":"cell cycle arrest resulting from mitotic G2/M transition checkpoint activation abolished","type":"exact"},{"name":"mitotic G2/M checkpoint arrest deficient","type":"related"}],"termid":"FYPO:0002519"}


id: PBO:0091306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2","termid":"PBO:0091306"}


id: PBO:0035963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035963"}


id: PBO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 28","termid":"PBO:0072342"}


id: GO:0018523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quinoline + acceptor + H2O = isoquinolin-1(2H)-one + reduced acceptor.","definition_xrefs":["EC:1.3.99.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"quinoline 2-oxidoreductase activity","secondary_identifiers":["UM-BBD_reactionID:r0045","MetaCyc:1.3.99.17-RXN","RHEA:17749"],"synonyms":[{"name":"quinoline:acceptor 2-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0018523"}


id: PBO:0073504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 3","termid":"PBO:0073504"}


id: GO:0042796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016073","GO:0006351"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase III","synonyms":[{"name":"snRNA transcription from Pol III promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0042796"}


id: _global:affected_by
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a gene product that influences the modification, where the experiment does not distinguish between direct action (e.g. adds or removes a modification) and indirect effects.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affected_by","termid":"_global:affected_by"}


id: MOD:00329
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a glutamic acid residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0324","PubMed:11821421","PubMed:11139583","PubMed:11980497","Unimod:436#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyheme-L-glutamate ester","synonyms":[{"name":"5-hydroxymethyl protoporphyrin IX 5-glutamate ester","type":"exact"},{"name":"BINDING Heme (covalent; via 1 link)","type":"exact"},{"name":"Hydroxyheme","type":"related"},{"name":"[3-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-7,12-diethenyl-8,13,17-trimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"cytochrome P450 CYP4A family heme cofactor","type":"exact"},{"name":"hydroxyheme","type":"related"},{"name":"hydroxyheme-L-glutamate ester","type":"exact"}],"termid":"MOD:00329"}


id: GO:0120017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a ceramide from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:25797198","GOC:krc","PMID:20823909","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transfer activity","termid":"GO:0120016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ceramide transfer activity","secondary_identifiers":["GO:0035620"],"synonyms":[{"name":"ceramide carrier activity","type":"exact"},{"name":"ceramide transporter activity","type":"broad"},{"name":"intermembrane ceramide transfer activity","type":"narrow"}],"termid":"GO:0120017"}


id: PBO:0083570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF MRS1","termid":"PBO:0083570"}


id: PBO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp2","termid":"PBO:0002075"}


id: PBO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase I Gls1 (predicted)","termid":"PBO:0001947"}


id: PBO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS3 and NABP interacting protein","termid":"PBO:0051684"}


id: PBO:0029574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination_(obsolete_FYPO:0002147)","termid":"PBO:0029574"}


id: PBO:0031022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_concentration_of_P-factor_in_growth_medium","termid":"PBO:0031022"}


id: PBO:0057733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1321","termid":"PBO:0057733"}


id: GO:1902607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["PMID:23407708","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"regulation of large conductance calcium-activated potassium channel activity","termid":"GO:1902606"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of large conductance calcium-activated potassium channel activity","synonyms":[{"name":"down regulation of BK KCa channels","type":"exact"},{"name":"down regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"down regulation of BK channel activity","type":"related"},{"name":"down regulation of large conductance KCa channels","type":"exact"},{"name":"down regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"down-regulation of BK KCa channels","type":"exact"},{"name":"down-regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"down-regulation of BK channel activity","type":"related"},{"name":"down-regulation of large conductance KCa channels","type":"exact"},{"name":"down-regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"downregulation of BK KCa channels","type":"exact"},{"name":"downregulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"downregulation of BK channel activity","type":"related"},{"name":"downregulation of large conductance KCa channels","type":"exact"},{"name":"downregulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"inhibition of BK KCa channels","type":"narrow"},{"name":"inhibition of BK calcium-activated potassium channel activity","type":"narrow"},{"name":"inhibition of BK channel activity","type":"related"},{"name":"inhibition of large conductance KCa channels","type":"narrow"},{"name":"inhibition of large conductance calcium-activated potassium channel activity","type":"narrow"},{"name":"negative regulation of BK KCa channels","type":"exact"},{"name":"negative regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"negative regulation of BK channel activity","type":"related"},{"name":"negative regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902607"}


id: PBO:0055238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2665","termid":"PBO:0055238"}


id: PBO:0079527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-yW synthesizing protein 1 homolog B","termid":"PBO:0079527"}


id: PBO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence","termid":"PBO:0000041"}


id: PBO:0029339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_tRNA_processing_intermediates_with_3'_extensions","termid":"PBO:0029339"}


id: PBO:0059905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 28","termid":"PBO:0059905"}


id: PBO:0036525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBS domain protein implicated in magnesium homeostasis (predicted)","termid":"PBO:0036525"}


id: PBO:0058193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4486","termid":"PBO:0058193"}


id: PBO:0076025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24","termid":"PBO:0076025"}


id: GO:0035346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of hypoxanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of hypoxanthine transport","termid":"GO:0035345"},{"relation_name":"positively_regulates","term_name":"hypoxanthine transport","termid":"GO:0035344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hypoxanthine transport","synonyms":[{"name":"positive regulation of 6-hydroxypurine transport","type":"exact"}],"termid":"GO:0035346"}


id: PBO:0064577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POT1 antisense RNA 1","termid":"PBO:0064577"}


id: PBO:0072047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 17","termid":"PBO:0072047"}


id: GO:0150050
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the septin cytoskeleton contained within the postsynapse.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:28065648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic septin cytoskeleton","termid":"GO:0150050"}


id: PBO:0076669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2","termid":"PBO:0076669"}


id: PR:O94380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI transamidase component PIG-T that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03902","PANTHER:PTHR12959:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component PIG-T homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.15","secondary_identifiers":["UniProtKB:O94380"],"synonyms":[{"name":"Spom972h-PIGT","type":"exact"}],"termid":"PR:O94380"}


id: PBO:0046871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule B","termid":"PBO:0046871"}


id: PBO:0083127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-ribulokinase; carbohydrate kinase that specifically converts D-ribulose to D-ribulose 5-phosphate during pentose metabolism; null mutant accumulates D-ribulose and the precursor ribitol; proposed to function as a D-ribulose metabolic repair enzyme; member of the FGGY family of carbohydrate kinases; human homolog, FGGY, is involved in both D-ribulose and ribitol metabolism; human FGGY has been linked to both sporadic amyotrophic lateral sclerosis and bipolar disorder","termid":"PBO:0083127"}


id: PR:Q09907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease III-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00443","PRO:DNx","PANTHER:PTHR10359:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease III homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.07","secondary_identifiers":["UniProtKB:Q09907"],"synonyms":[{"name":"DNA glycoslyase/AP lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NTHL1","type":"exact"},{"name":"bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09907"}


id: GO:0061888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte activation.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:20005821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of astrocyte differentiation","termid":"GO:0048710"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte activation","termid":"GO:0061888"}


id: PBO:0060491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 2","termid":"PBO:0060491"}


id: SO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_loop","synonyms":[{"name":"miRNA loop","type":"exact"}],"termid":"SO:0001246"}


id: PR:Q9P7L4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fumarylacetoacetate hydrolase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11820:SF7","OMA:SCHPO03866","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C21C3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.09c","secondary_identifiers":["UniProtKB:Q9P7L4"],"synonyms":[{"name":"Spom972h-FAHD1","type":"exact"}],"termid":"PR:Q9P7L4"}


id: GO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.","definition_xrefs":["PMID:21123617","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen-containing extracellular matrix","termid":"GO:0062023"}


id: PBO:0057367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-1","termid":"PBO:0057367"}


id: RO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"RO:0002018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","termid":"RO:0002017"}


id: PBO:0078209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-2","termid":"PBO:0078209"}


id: GO:0021842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons away from the signal during migration from the subpallium to the cortex.","definition_xrefs":["GOC:jid","GO_REF:0000021","PMID:12626695","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"negative chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021842"}


id: GO:0014839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myoblast migrates along an entire fiber to the site of injury. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","PMID:16607119","CL:0000056","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast migration","termid":"GO:0051451"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast migration involved in skeletal muscle regeneration","synonyms":[{"name":"mononucleate cell migration involved in skeletal muscle regeneration","type":"broad"}],"termid":"GO:0014839"}


id: GO:0004021
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107426],"is_not":false,"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.","definition_xrefs":["EC:2.6.1.2","RHEA:19453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine-oxo-acid transaminase activity","termid":"GO:0047635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-alanine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70524","Reactome:R-HSA-507749","Reactome:R-HSA-507775","MetaCyc:ALANINE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-70523","KEGG_REACTION:R00258"],"synonyms":[{"name":"ALT","type":"related"},{"name":"GPT","type":"related"},{"name":"L-alanine aminotransferase activity","type":"broad"},{"name":"L-alanine transaminase activity","type":"broad"},{"name":"L-alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine aminotransferase activity","type":"broad"},{"name":"alanine transaminase activity","type":"broad"},{"name":"alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine-pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine aminotransferase","type":"broad"},{"name":"glutamic acid-pyruvic acid transaminase activity","type":"related"},{"name":"glutamic--alanine transaminase activity","type":"related"},{"name":"glutamic--pyruvic transaminase activity","type":"related"},{"name":"glutamic-pyruvic aminotransferase activity","type":"related"},{"name":"pyruvate transaminase activity","type":"broad"},{"name":"pyruvate-alanine aminotransferase activity","type":"related"},{"name":"pyruvate-glutamate transaminase activity","type":"related"}],"termid":"GO:0004021","terms_by_termid":{"GO:0004021":null}}


id: PBO:0055413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2843","termid":"PBO:0055413"}


id: PBO:0031656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031656"}


id: PBO:0013766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit Acp2","termid":"PBO:0013766"}


id: GO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin C, the calcium-binding subunit of the troponin complex.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"troponin C binding","termid":"GO:0030172"}


id: GO:0050942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"positively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pigment cell differentiation","synonyms":[{"name":"activation of pigment cell differentiation","type":"narrow"},{"name":"stimulation of pigment cell differentiation","type":"narrow"},{"name":"up regulation of pigment cell differentiation","type":"exact"},{"name":"up-regulation of pigment cell differentiation","type":"exact"},{"name":"upregulation of pigment cell differentiation","type":"exact"}],"termid":"GO:0050942"}


id: FYPO:0005508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transport of a substance from the plasma membrane to the vacuole is abnormal. Transport normally occurs in two stages, plasma membrane to endosome followed by endosome to vacuole transport.","definition_xrefs":["PMID:26749213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal plasma membrane to vacuole transport","synonyms":[{"name":"abnormal plasma membrane to vacuole protein transport","type":"narrow"}],"termid":"FYPO:0005508"}


id: GO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurine + 2-oxoglutarate = sulfoacetaldehyde + L-glutamate.","definition_xrefs":["PMID:16535664","RHEA:16353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"taurine-2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:RXN-2301","EC:2.6.1.55"],"synonyms":[{"name":"taurine aminotransferase activity","type":"exact"},{"name":"taurine transaminase activity","type":"exact"},{"name":"taurine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"taurine--glutamate transaminase activity","type":"related"},{"name":"taurine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0050322"}


id: PR:P78827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketol-acid reductoisomerase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.12","synonyms":[{"name":"Spom972h-ilv5","type":"exact"},{"name":"acetohydroxy-acid reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78827"}


id: PR:P41838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rae1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)+ RNA export protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.05c","synonyms":[{"name":"Spom972h-rae1","type":"exact"}],"termid":"PR:P41838"}


id: GO:1902743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:16054028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lamellipodium organization","termid":"GO:1902743"}


id: GO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-7 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-7 production","termid":"GO:0032676"},{"relation_name":"positively_regulates","term_name":"interleukin-7 production","termid":"GO:0032636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-7 production","secondary_identifiers":["GO:0150114","GO:0045413"],"synonyms":[{"name":"activation of interleukin-7 production","type":"narrow"},{"name":"positive regulation of IL-7 production","type":"exact"},{"name":"positive regulation of interleukin-7 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-7 secretion","type":"narrow"},{"name":"stimulation of interleukin-7 production","type":"narrow"},{"name":"up regulation of interleukin-7 production","type":"exact"},{"name":"up-regulation of interleukin-7 production","type":"exact"},{"name":"upregulation of interleukin-7 production","type":"exact"}],"termid":"GO:0032756"}


id: GO:2000860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mineralocorticoid secretion","termid":"GO:2000857"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"positively_regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of aldosterone secretion","termid":"GO:2000860"}


id: GO:1905899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle tissue development.","definition_xrefs":["GOC:bhm","GO_REF:0000058","PMID:14709716","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"smooth muscle tissue development","termid":"GO:0048745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle tissue development","termid":"GO:1905899"}


id: PBO:0090594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L58","termid":"PBO:0090594"}


id: PBO:0066196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 15","termid":"PBO:0066196"}


id: PBO:0042953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 7","termid":"PBO:0042953"}


id: GO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 member 1 taste receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor binding","termid":"GO:0031883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 member 1 taste receptor binding","synonyms":[{"name":"type 1 member 1 taste receptor ligand","type":"narrow"}],"termid":"GO:0031884"}


id: PBO:0082130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin assembly factor; C-terminal WCA domain activates Arp2/3 complex-mediated nucleation of branched actin filaments, polyproline domain nucleates actin filaments independent of Arp2/3; mutants are defective in endocytosis, bud site selection, cytokinesis; human homolog WAS (Wiskott-Aldrich Syndrome) implicated in severe immunodeficiency; human WAS complements yeast null mutant, but only in presence of WIPF1, which mediates localization of WAS to cortical patches","termid":"PBO:0082130"}


id: FYPO:0001988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a pH higher than that of standard S. pombe growth medium (abut 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal cell population growth at high pH","synonyms":[{"name":"normal growth at high pH","type":"broad"},{"name":"normal vegetative cell population growth at high pH","type":"exact"}],"termid":"FYPO:0001988"}


id: PBO:0056206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B1","termid":"PBO:0056206"}


id: PBO:0086626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; overexpression causes a cell cycle delay or arrest; YML053C is not an essential gene","termid":"PBO:0086626"}


id: GO:0032640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of tumor necrosis factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Tumor necrosis factor is an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis.","definition_xrefs":["PMID:10891884","GOC:mah","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor production","secondary_identifiers":["GO:1990774","GO:0042533"],"synonyms":[{"name":"TNF alpha biosynthesis","type":"narrow"},{"name":"TNF biosynthesis","type":"narrow"},{"name":"TNF biosynthetic process","type":"narrow"},{"name":"TNF production","type":"exact"},{"name":"TNF-alpha biosynthesis","type":"narrow"},{"name":"TNF-alpha biosynthetic process","type":"narrow"},{"name":"TNF-alpha production","type":"related"},{"name":"Tnfa production","type":"related"},{"name":"cachectin production","type":"exact"},{"name":"tumor necrosis factor anabolism","type":"narrow"},{"name":"tumor necrosis factor biosynthesis","type":"narrow"},{"name":"tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"tumor necrosis factor formation","type":"narrow"},{"name":"tumor necrosis factor secretion","type":"narrow"},{"name":"tumor necrosis factor synthesis","type":"narrow"},{"name":"tumor necrosis factor-alpha production","type":"related"}],"termid":"GO:0032640"}


id: PBO:0062687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 8 pseudogene","termid":"PBO:0062687"}


id: GO:0051408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glyceraldehyde 3-phosphate(out) + phosphate(in) = glyceraldehyde 3-phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"triose-phosphate:phosphate antiporter activity","termid":"GO:0009670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde 3-phosphate:phosphate antiporter activity","synonyms":[{"name":"glyceraldehyde 3-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051408"}


id: GO:2001128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"},{"relation_name":"is_a","term_name":"methylamine metabolic process","termid":"GO:0030416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}


id: PBO:0069246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 501, pseudogene","termid":"PBO:0069246"}


id: PBO:0003268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine diphosphate-N-acetylglucosamine transporter Hut1","termid":"PBO:0003268"}


id: PBO:0083603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase","termid":"PBO:0083603"}


id: PBO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin mu","termid":"PBO:0043966"}


id: PBO:0060483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 5","termid":"PBO:0060483"}


id: FYPO:0000932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"increased protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"increased protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000932"}


id: GO:0141089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of glucose.","definition_xrefs":["PMID:17470517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"glucose sensor activity","synonyms":[{"name":"glucose sensing activity","type":"exact"}],"termid":"GO:0141089"}


id: PATO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female fertile","termid":"PATO:0000888"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased female fertility","synonyms":[{"name":"low female fertility","type":"exact"}],"termid":"PATO:0001830"}


id: GO:0005524
data:
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id: PBO:0043243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 3","termid":"PBO:0043243"}


id: FYPO:0007732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007732"}


id: PBO:0067219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 286, pseudogene","termid":"PBO:0067219"}


id: PBO:0036260
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADEnine requiring","termid":"PBO:0036260"}


id: PBO:0027738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphatase_activity","termid":"PBO:0027738"}


id: GO:0072002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Malpighian tubule over time, from its formation to the mature structure. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which leads into the posterior part of the gut.","definition_xrefs":["FBbt:00005786","GOC:mtg_kidney_jan10","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"renal tubule development","termid":"GO:0061326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule development","termid":"GO:0072002"}


id: GO:0140193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140193)","termid":"GO:0140193"}


id: PBO:0043952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B3","termid":"PBO:0043952"}


id: GO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host chemokine activity.","definition_xrefs":["VZ:813","GOC:bf","UniProtKB-KW:KW-1086","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host chemokine activity (obsolete GO:0039553)","synonyms":[{"name":"down-regulation by virus of host chemokine activity","type":"exact"},{"name":"downregulation by virus of host chemokine activity","type":"exact"},{"name":"inhibition by virus of host chemokine activity","type":"narrow"},{"name":"inhibition of host chemokines by virus","type":"narrow"},{"name":"negative regulation by virus of host chemokine activity","type":"exact"}],"termid":"GO:0039553"}


id: FYPO:0001986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-fluorouracil than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to 5-fluorouracil","synonyms":[{"name":"resistance to 5-FU","type":"exact"},{"name":"resistance to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"resistance to 5-fluorouracil during vegetative growth","type":"exact"},{"name":"resistant to 5-fluorouracil","type":"exact"}],"termid":"FYPO:0001986"}


id: GO:0008091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0015629","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"spectrin","secondary_identifiers":["NIF_Subcellular:sao536287099","Wikipedia:Spectrin"],"termid":"GO:0008091"}


id: PBO:0062517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 3 (gene/pseudogene)","termid":"PBO:0062517"}


id: GO:0043539
data:
  {"annotated_genes":["SJAG_00439","SJAG_03699","SJAG_04509","SJAG_00333","SJAG_02057","SJAG_04140","SJAG_03453","SJAG_03090","SJAG_02605","SJAG_03340","SJAG_04502","SJAG_01401","SJAG_04614","SJAG_03695","SJAG_03371","SJAG_03618","SJAG_01213","SJAG_00142","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84159,85467,87076,87350,87395,87396,96160,101302,105466,106744,109167,113436,114506],"is_not":false,"summary":null,"term":"GO:0043539"},{"annotations":[107396,101193,113240,108280,107112,105073,97810,109166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein serine/threonine kinase.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00333":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_02605":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein ser/thr kinase activator activity","type":"exact"}],"termid":"GO:0043539","terms_by_termid":{"GO:0043539":null,"GO:0061575":null}}


id: PBO:0046209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 2","termid":"PBO:0046209"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: PBO:0048383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 6","termid":"PBO:0048383"}


id: GO:1990985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to oxidative stress.","definition_xrefs":["PMID:25950479","GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis in response to oxidative stress (obsolete GO:1990985)","termid":"GO:1990985"}


id: PBO:0039676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit mu 1","termid":"PBO:0039676"}


id: PBO:0026789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h-_cells","termid":"PBO:0026789"}


id: PR:P36607
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.01c","synonyms":[{"name":"DNA repair protein RAD5 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad8","type":"exact"}],"termid":"PR:P36607"}


id: PATO:0000591
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A thickness which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"thickness","termid":"PATO:0000915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased thickness","synonyms":[{"name":"high thickness","type":"exact"},{"name":"stout","type":"exact"},{"name":"thick","type":"related"},{"name":"thickened","type":"exact"}],"termid":"PATO:0000591"}


id: PBO:0068305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 10","termid":"PBO:0068305"}


id: PBO:0087599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; null mutant is sensitive to drug inducing secretion of vacuolar cargo; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0087599"}


id: GO:0090116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete C-5 methylation of cytosine (obsolete GO:0090116)","termid":"GO:0090116"}


id: GO:2000299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of Rho-dependent protein serine/threonine kinase activity","termid":"GO:2000298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"negative regulation of ROCK kinase activity","type":"exact"},{"name":"negative regulation of Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:2000299"}


id: PBO:0030344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_hypoxia","termid":"PBO:0030344"}


id: PBO:0027788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cytoplasm_with_increased_protein_localization_to_nucleus","termid":"PBO:0027788"}


id: PBO:0017593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family Vps74 (predicted)","termid":"PBO:0017593"}


id: PBO:0028033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_elongated_mononucleate_vegetative_cell","termid":"PBO:0028033"}


id: GO:1900526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:8056324","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900526)","synonyms":[{"name":"negative regulation of phosphatidylserine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900526"}


id: PBO:0073000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 2","termid":"PBO:0073000"}


id: PBO:0039179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 9","termid":"PBO:0039179"}


id: GO:0047668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-amygdalin + H2O = (R)-prunasin + D-glucose.","definition_xrefs":["RHEA:14177","EC:3.2.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"amygdalin beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R02985","GO:0080080","MetaCyc:AMYGDALIN-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"(R)-amygdalin beta-glucosidase activity","type":"exact"},{"name":"amygdalin b-glucosidase activity","type":"exact"},{"name":"amygdalin beta-D-glucohydrolase activity","type":"related"},{"name":"amygdalin glucosidase activity","type":"related"},{"name":"amygdalin hydrolase activity","type":"related"},{"name":"amygdalinase","type":"broad"}],"termid":"GO:0047668"}


id: PATO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coating quality which is sticky or clammy.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coating","termid":"PATO:0002012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viscid","termid":"PATO:0001370"}


id: PBO:0081689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 610","termid":"PBO:0081689"}


id: PBO:0070426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 4","termid":"PBO:0070426"}


id: GO:2000268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, intrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, intrinsic pathway","termid":"GO:2000266"},{"relation_name":"positively_regulates","term_name":"blood coagulation, intrinsic pathway","termid":"GO:0007597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of blood coagulation, intrinsic pathway","termid":"GO:2000268"}


id: GO:0072052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}


id: FYPO:0004616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, does not occur at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["PomBase:mah","GO:0070462","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"abolished cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"abolished microtubule catastrophe at cell tip","type":"related"},{"name":"abolished microtubule plus end shrinkage at cell tip","type":"related"},{"name":"abolished plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"cytoplasmic microtubule depolymerization at plus end at cell tip abolished","type":"exact"}],"termid":"FYPO:0004616"}


