# terms

id: PBO:0047313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 2","termid":"PBO:0047313"}


id: PBO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1D divergent transcript","termid":"PBO:0060326"}


id: PBO:0068458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 34, pseudogene","termid":"PBO:0068458"}


id: GO:0160065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:21131906","PMID:22684255","PMID:22525225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"SIN/MEN signaling complex","synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065"}


id: PATO:0002395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned away from the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized abaxially","termid":"PATO:0002395"}


id: PBO:0086527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YFL019C is not an essential gene","termid":"PBO:0086527"}


id: FYPO:0003460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular trehalose level during cellular response to oxidative stress","synonyms":[{"name":"decreased cellular trehalose level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during oxidative stress response","type":"exact"},{"name":"decreased cellular trehalose level during vegetative growth and during cellular response to oxidative stress","type":"exact"},{"name":"decreased cellular trehalose level in response to oxidative stress","type":"exact"},{"name":"decreased trehalose accumulation during cellular response to oxidative stress","type":"related"},{"name":"reduced cellular trehalose level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0003460"}


id: GO:0008349
data:
  {"annotated_genes":["SJAG_03384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97058],"is_not":false,"summary":null,"term":"GO:0008349"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of serine and threonine residues in a mitogen-activated protein kinase kinase kinase (MAPKKK), resulting in activation of MAPKKK. MAPKKK signaling pathways relay, amplify and integrate signals from the plasma membrane to the nucleus in response to a diverse range of extracellular stimuli.","definition_xrefs":["PMID:11790549","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0004672","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"MAP kinase kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-177692","Reactome:R-HSA-936991","Reactome:R-HSA-9645442"],"synonyms":[{"name":"MAP4K activity","type":"exact"},{"name":"MAPKKKK","type":"exact"}],"termid":"GO:0008349","terms_by_termid":{"GO:0008349":null}}


id: GO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from a DNA template as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:txnOH","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-templated transcription in response to stress (obsolete GO:0043620)","synonyms":[{"name":"regulation of DNA-dependent transcription in response to stress","type":"exact"}],"termid":"GO:0043620"}


id: GO:0060858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances within a cell by a cellular process that begins with the formation of membrane-bounded vesicles in which the transported substances are enclosed or located in the vesicle membrane which are then targeted to, and fuse with, an acceptor membrane contributing to the shedding of a floral organ.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle-mediated transport involved in floral organ abscission","synonyms":[{"name":"membrane trafficking involved in floral organ shedding","type":"related"}],"termid":"GO:0060858"}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: MOD:01724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01724"}


id: GO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose, with the production of acetic acid, butyric acid, carbon dioxide (CO2), and dihydrogen; effected by some saccharolytic species of Clostridium, e.g. C. butyricum.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process","termid":"GO:0006007"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"glucose catabolic process to butyrate","synonyms":[{"name":"butyrate fermentation","type":"exact"},{"name":"glucose fermentation to butyrate","type":"exact"}],"termid":"GO:0030645"}


id: PBO:0010241
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge, prl10 was a subsequence of SPNCRNA.1234","termid":"PBO:0010241"}


id: GO:2001243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"negative regulation of intrinsic apoptosis","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"negative regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001243"}


id: PBO:0057035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 129-1","termid":"PBO:0057035"}


id: _global:hyperparasitized_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of hyperparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasitized_by","secondary_identifiers":["RO:0002554"],"synonyms":[{"name":"has epiparasite","type":"related"},{"name":"has hyperparasite","type":"related"},{"name":"hyperparasitoidized by","type":"related"}],"termid":"_global:hyperparasitized_by"}


id: PBO:0056140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LZTS1 antisense RNA 1","termid":"PBO:0056140"}


id: PBO:0080276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 39 pseudogene","termid":"PBO:0080276"}


id: PBO:0076576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 4","termid":"PBO:0076576"}


id: GO:0019197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Includes phosphoenolpyruvate-protein phosphatase (enzyme I of the phosphotransferase system) and protein-N(PI)-phosphohistidine-sugar phosphotransferase (enzyme II of the phosphotransferase system).","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"phosphoenolpyruvate-dependent sugar phosphotransferase complex","termid":"GO:0019197"}


id: PBO:0078189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-2","termid":"PBO:0078189"}


id: FYPO:0006823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, but elongates at a slower rate than normal and divides with an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"slow vegetative cell growth","termid":"FYPO:0006821"},{"relation_name":"is_a","term_name":"viable small vegetative cell","termid":"FYPO:0000648"},{"relation_name":"is_a","term_name":"slow vegetative cell growth","termid":"FYPO:0006821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000005","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"viable small vegetative cell with slow cell growth","synonyms":[{"name":"mitosis with small cell size and slow cell growth","type":"related"},{"name":"reduced size at cell division with slow cell growth","type":"related"},{"name":"small viable vegetative cell with slow cell growth","type":"exact"},{"name":"viable small cell with slow cell growth during vegetative growth","type":"exact"},{"name":"viable small vegetative cell with slow cell growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006823"}


id: FYPO:0007453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the Arp2/3 protein complex is lower than normal.","definition_xrefs":["PMID:10588653","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level in Arp2/3 complex","synonyms":[{"name":"decreased protein level in Arp2/3 complex during mitotic cell cycle","type":"related"},{"name":"decreased protein level in Arp2/3 complex during vegetative growth","type":"exact"},{"name":"decreased protein level in Arp2/3 protein complex","type":"exact"},{"name":"reduced protein level in Arp2/3 complex","type":"exact"}],"termid":"FYPO:0007453"}


id: PBO:0088111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase Y; processed to mature form by Prb1p","termid":"PBO:0088111"}


id: FYPO:0002255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"enlarged nucleus","synonyms":[{"name":"enlarged nuclei","type":"exact"}],"termid":"FYPO:0002255"}


id: SO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA or RNA molecules that have been selected from random pools based on their ability to bind other molecules.","direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aptamer","secondary_identifiers":["http://en.wikipedia.org/wiki/Aptamer"],"termid":"SO:0000031"}


id: GO:0046995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen reduces a known acceptor other than a cytochrome, an iron-sulfur protein, NAD, NADP, or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","secondary_identifiers":["EC:1.12.98.-"],"termid":"GO:0046995"}


id: PBO:0050770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1","termid":"PBO:0050770"}


id: PBO:0110483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 pseudogene 1","termid":"PBO:0110483"}


id: PBO:0076156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 divergent transcript","termid":"PBO:0076156"}


id: PATO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a somewhat elongated form with approximately parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblong","termid":"PATO:0000946"}


id: PBO:0036497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved calcium-binding protein","termid":"PBO:0036497"}


id: PBO:0085294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein; contains 3 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; member of DUP240 gene family; PRM9 has a paralog, PRM8, that arose from a segmental duplication","termid":"PBO:0085294"}


id: PBO:0034522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_arsenite","termid":"PBO:0034522"}


id: GO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of isoprenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Isoprenoids comprise a group of compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"isoprenoid transport","termid":"GO:0046864"}


id: FYPO:0002502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"},{"relation_name":"is_a","term_name":"normal protein palmitoylation","termid":"FYPO:0002500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein palmitoylation during vegetative growth","synonyms":[{"name":"normal protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide palmitoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002502"}


id: PBO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 3 pseudogene","termid":"PBO:0061915"}


id: FYPO:0005371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which linear minichromosomes are lost at a higher frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PMID:11226171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during vegetative growth","termid":"FYPO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased linear minichromosome loss during vegetative growth","synonyms":[{"name":"increased linear minichromosome loss during mitotic cell cycle","type":"related"},{"name":"mitotic linear minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0005371"}


id: GO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of SNARE complex disassembly","termid":"GO:0035541"}


id: GO:0050214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + O2 + progesterone = A + H2O + testosterone acetate.","definition_xrefs":["RHEA:11984","EC:1.14.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"progesterone monooxygenase activity","secondary_identifiers":["MetaCyc:PROGESTERONE-MONOOXYGENASE-RXN","KEGG_REACTION:R02212"],"synonyms":[{"name":"progesterone hydroxylase activity","type":"related"},{"name":"progesterone,hydrogen-donor:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0050214"}


id: PBO:0064634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate amidotransferase","termid":"PBO:0064634"}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: PBO:0091796
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2709414_2709414insC","termid":"PBO:0091796"}


id: PBO:0039069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 1","termid":"PBO:0039069"}


id: GO:0033412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"UAG codon-amino acid adaptor activity","synonyms":[{"name":"TAG codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033412"}


id: PBO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse Glia Maturation Factor homolog","termid":"PBO:0001293"}


id: PBO:0084256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol phosphatase involved in inositol pyrophosphate metabolism; hydrolyzes the beta-phosphate from the 5-diphosphate group of PP-InsPs including: 5PP-IP5 (IP7), 1,5PP-IP4 (IP8) and 5-PP-InsP4; functions as an anti-prion (anti-[PSI]) component; member of the atypical dual-specificity subgroup of the protein tyrosine-phosphatase (PTP) superfamily; localizes to the cytoplasm","termid":"PBO:0084256"}


id: PBO:0072957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sciellin","termid":"PBO:0072957"}


id: PBO:0091960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase, type B family protein","termid":"PBO:0091960"}


id: PBO:0083290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant is viable","termid":"PBO:0083290"}


id: PBO:0081341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 141","termid":"PBO:0081341"}


id: GO:0052617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + ent-kaur-16-en-19-al + oxygen = H2O + NADP+ + ent-kaurenoate.","definition_xrefs":["MetaCyc:RXN-7580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ent-kaur-16-en-19-al oxidase activity","secondary_identifiers":["RHEA:10928","EC:1.14.14.86"],"termid":"GO:0052617"}


id: PBO:0060241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein H","termid":"PBO:0060241"}


id: PBO:0077062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 8","termid":"PBO:0077062"}


id: PBO:0080846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 10","termid":"PBO:0080846"}


id: FYPO:0007497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which fewer, larger nuclear exosome foci are present than normal. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"aggregated nuclear exosome foci","synonyms":[{"name":"Mmi1 nuclear foci present in decreased numbers","type":"related"},{"name":"aggregated Mmi1 nuclear foci","type":"exact"},{"name":"aggregated nuclear exosome foci during mitotic cell cycle","type":"related"},{"name":"aggregated nuclear exosome foci during vegetative growth","type":"exact"},{"name":"nuclear exosome foci present in decreased numbers","type":"related"}],"termid":"FYPO:0007497"}


id: FYPO:0002790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles present in increased numbers","synonyms":[{"name":"additional vacuoles present","type":"exact"},{"name":"extra vacuoles","type":"exact"},{"name":"vacuoles present in greater numbers","type":"exact"}],"termid":"FYPO:0002790"}


id: GO:0009243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the O side chain of a lipopolysaccharide, which determines the antigenic specificity of the organism. It is made up of about 50 repeating units of a branched tetrasaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"O antigen metabolic process","termid":"GO:0046402"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"O antigen biosynthetic process","synonyms":[{"name":"O antigen anabolism","type":"exact"},{"name":"O antigen biosynthesis","type":"exact"},{"name":"O antigen formation","type":"exact"},{"name":"O antigen synthesis","type":"exact"}],"termid":"GO:0009243"}


id: FYPO:0004638
data:
  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cellular physical object quality","type":"exact"}],"termid":"FYPO:0004638","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000356":null,"FYPO:0000648":null,"FYPO:0000747":null,"FYPO:0001012":null,"FYPO:0001122":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0002026":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0004205":null,"FYPO:0004293":null,"FYPO:0004295":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0006433":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO:0007801":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0062775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 3","termid":"PBO:0062775"}


id: GO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-keto-5-aminohexanoate + acetyl-CoA = L-3-aminobutyryl-CoA + acetoacetate.","definition_xrefs":["PMID:13064","MetaCyc:R125-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"3-keto-5-aminohexanoate cleavage activity","secondary_identifiers":["RHEA:31555"],"synonyms":[{"name":"3-keto-5-aminohexanoate cleavage enzyme","type":"exact"}],"termid":"GO:0043720"}


id: GO:2000485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamine transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"glutamine transport","termid":"GO:0006868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of glutamine transport","synonyms":[{"name":"regulation of L-glutamine transport","type":"related"}],"termid":"GO:2000485"}


id: PBO:0026634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5_acetylation","termid":"PBO:0026634"}


id: MOD:00022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-methionine.","definition_xrefs":["PubMed:6692818","RESID:AA0013","PubMed:6411710","ChEBI:29983","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine residue","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"2-azanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"L-(-)-methionine","type":"exact"},{"name":"L-methionine","type":"exact"},{"name":"Met","type":"exact"},{"name":"S-methyl-L-homocysteine","type":"exact"},{"name":"alpha-amino-gamma-methylmercaptobutyric acid","type":"exact"},{"name":"alpha-amino-gamma-methylthiobutyric acid","type":"exact"},{"name":"gamma-methylthio-alpha-aminobutyric acid","type":"exact"}],"termid":"MOD:00022"}


id: GO:0035519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 29 of the ubiquitin monomers, is added to a protein. K29-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:17028573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K29-linked ubiquitination","synonyms":[{"name":"protein K29-linked polyubiquitination","type":"exact"}],"termid":"GO:0035519"}


id: PR:Q96WV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA (guanine-N(7)-)-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04520","PANTHER:PTHR23417:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N(7)-)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.04c","secondary_identifiers":["UniProtKB:Q96WV1"],"synonyms":[{"name":"Spom972h-METTL1","type":"exact"},{"name":"tRNA (guanine(46)-N(7))-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m7G46)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transfer RNA methyltransferase 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV1"}


id: PBO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs120 (predicted)","termid":"PBO:0001942"}


id: GO:1905538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a polysome.","definition_xrefs":["GOC:TermGenie","GOC:bc","GOC:PARL","PMID:18426977"],"gene_count":0,"genotype_count":0,"name":"obsolete polysome binding (obsolete GO:1905538)","synonyms":[{"name":"polyribosome binding","type":"exact"}],"termid":"GO:1905538"}


id: PBO:0027376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_and_nuclear_pore_aggregation_in_cytoplasm_during_mitotic_telophase","termid":"PBO:0027376"}


id: PR:O14043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.10c","synonyms":[{"name":"Spom972h-csc4","type":"exact"}],"termid":"PR:O14043"}


id: PBO:0085127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein found in preribosomal complexes; contains an RNA recognition motif (RRM); relative distribution to the nucleolus increases upon DNA replication stress","termid":"PBO:0085127"}


id: PR:O42667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssm4 gene.","definition_xrefs":["UniProtKB:O42667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein ssm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.13c","synonyms":[{"name":"Spom972h-ssm4","type":"exact"}],"termid":"PR:O42667"}


id: GO:1990578
data:
  {"annotated_genes":["SJAG_00784","SJAG_01227","SJAG_01422","SJAG_03281","SJAG_01329","SJAG_01785","SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83599,90888,93974,94824,96748,102477,111743],"is_not":false,"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"The membrane of the perinuclear endoplasmic reticulum, which is the portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus.","definition_xrefs":["PMID:25454947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"part_of","term_name":"perinuclear endoplasmic reticulum","termid":"GO:0097038"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00784":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01785":null,"SJAG_03281":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perinuclear ER membrane","type":"exact"}],"termid":"GO:1990578","terms_by_termid":{"GO:1990578":null}}


id: PBO:0088295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyrimidine nucleotide Rim2","termid":"PBO:0088295"}


id: GO:0071481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to X-ray","termid":"GO:0010165"},{"relation_name":"is_a","term_name":"cellular response to ionizing radiation","termid":"GO:0071479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to X-ray","synonyms":[{"name":"cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:0071481"}


id: GO:0005496
data:
  {"annotated_genes":["SJAG_01590","SJAG_02982","SJAG_02323","SJAG_00355","SJAG_03718","SJAG_01407","SJAG_01329","SJAG_04018","SJAG_00054","SJAG_01722","SJAG_02375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90809],"is_not":false,"summary":null,"term":"GO:0005496"},{"annotations":[104375,105538,98768,107492,112376,90421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"},{"annotations":[106026,102482,86619,97825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032934"}]},"cv_name":"molecular_function","definition":"Binding to a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02982":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"steroid binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005496","terms_by_termid":{"GO:0005496":null,"GO:0008142":null,"GO:0032934":null}}


id: GO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide catabolic process (obsolete GO:0017184)","synonyms":[{"name":"peptidyl-diphthamide breakdown","type":"exact"},{"name":"peptidyl-diphthamide catabolism","type":"exact"},{"name":"peptidyl-diphthamide degradation","type":"exact"}],"termid":"GO:0017184"}


id: GO:1903138
data:
  {"annotated_genes":["SJAG_02392","SJAG_05000","SJAG_03263","SJAG_01114","SJAG_04825","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92026,95598,99966,103204,103775,114418],"is_not":false,"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of MAPK cascade involved in cell wall organization or biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23934882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stress-activated MAPK cascade","termid":"GO:0032873"},{"relation_name":"is_a","term_name":"regulation of cell wall integrity MAPK cascade","termid":"GO:1903137"},{"relation_name":"negatively_regulates","term_name":"cell wall integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cell wall integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"down regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"down regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"down regulation of Mpk1 cascade","type":"narrow"},{"name":"down regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"down regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"down regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"down regulation of Slt2 cascade","type":"narrow"},{"name":"down regulation of cell integrity MAPK pathway","type":"exact"},{"name":"down regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"down-regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"down-regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"down-regulation of Mpk1 cascade","type":"narrow"},{"name":"down-regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"down-regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"down-regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"down-regulation of Slt2 cascade","type":"narrow"},{"name":"down-regulation of cell integrity MAPK pathway","type":"exact"},{"name":"down-regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"downregulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"downregulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"downregulation of Mpk1 cascade","type":"narrow"},{"name":"downregulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"downregulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"downregulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"downregulation of Slt2 cascade","type":"narrow"},{"name":"downregulation of cell integrity MAPK pathway","type":"exact"},{"name":"downregulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"inhibition of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"inhibition of MAPK cascade involved in cell wall organization or biogenesis","type":"narrow"},{"name":"inhibition of MAPKKK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"inhibition of Mpk1 cascade","type":"narrow"},{"name":"inhibition of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"inhibition of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"inhibition of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"inhibition of Slt2 cascade","type":"narrow"},{"name":"inhibition of cell integrity MAPK pathway","type":"narrow"},{"name":"inhibition of cell wall biogenesis, MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"negative regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"negative regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"negative regulation of Mpk1 cascade","type":"narrow"},{"name":"negative regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"negative regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"negative regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"negative regulation of Slt2 cascade","type":"narrow"},{"name":"negative regulation of cell integrity MAPK pathway","type":"exact"},{"name":"negative regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"}],"termid":"GO:1903138","terms_by_termid":{"GO:1903138":null}}


id: PBO:0027580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multiseptate_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027580"}


id: PBO:0041680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dependent secretion activator","termid":"PBO:0041680"}


id: GO:2000206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000206"}


id: PATO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/obconical"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conical","termid":"PATO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obconical","termid":"PATO:0002347"}


id: FYPO:0004791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22959349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"increased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"increased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004791"}


id: GO:0071434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of angiotensin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to angiotensin","synonyms":[{"name":"angiotensin mediated chemotaxis","type":"broad"},{"name":"angiotensin-mediated cell chemotaxis","type":"exact"}],"termid":"GO:0071434"}


id: PR:Q9UTC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00201","PANTHER:PTHR13303:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: PBO:0066385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC114 meiotic recombination protein","termid":"PBO:0066385"}


id: PBO:0027690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_enlarged_around_nucleus","termid":"PBO:0027690"}


id: PBO:0030994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_osmotic_stress","termid":"PBO:0030994"}


id: PBO:0028983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_acid_phosphatase_activity","termid":"PBO:0028983"}


id: PBO:0031501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fatty_acid_synthase_activity","termid":"PBO:0031501"}


id: PBO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor-like Chr3 (predicted)","termid":"PBO:0000211"}


id: GO:1905838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric D-loop disassembly.","definition_xrefs":["GOC:BHF","GO_REF:0000058","PMID:15200954","GOC:nc","GOC:TermGenie","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"regulates","term_name":"telomeric D-loop disassembly","termid":"GO:0061820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of telomeric D-loop disassembly","termid":"GO:1905838"}


id: PBO:0027227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heme_binding","termid":"PBO:0027227"}


id: GO:1905675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adaptive immune memory response.","definition_xrefs":["PMID:26831526","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response","termid":"GO:0002820"},{"relation_name":"is_a","term_name":"regulation of adaptive immune memory response","termid":"GO:1905674"},{"relation_name":"negatively_regulates","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune memory response","synonyms":[{"name":"down regulation of adaptive immune memory response","type":"exact"},{"name":"down-regulation of adaptive immune memory response","type":"exact"},{"name":"downregulation of adaptive immune memory response","type":"exact"},{"name":"inhibition of adaptive immune memory response","type":"narrow"}],"termid":"GO:1905675"}


id: GO:1905802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to manganese ion","synonyms":[{"name":"regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905802"}


id: GO:1901136
data:
  {"annotated_genes":["SJAG_00409","SJAG_00620","SJAG_03676","SJAG_03771","SJAG_06621","SJAG_02247","SJAG_02369","SJAG_01359","SJAG_03013","SJAG_00605","SJAG_02009","SJAG_00839","SJAG_05314","SJAG_04192","SJAG_00461","SJAG_04870","SJAG_02945","SJAG_01673","SJAG_02796","SJAG_03373","SJAG_02481","SJAG_02959","SJAG_03828","SJAG_00633","SJAG_03852","SJAG_03903","SJAG_01012","SJAG_02107","SJAG_01310","SJAG_00685","SJAG_06622","SJAG_03660","SJAG_03032","SJAG_04334","SJAG_04487","SJAG_04927","SJAG_01858","SJAG_04048","SJAG_00957","SJAG_02580","SJAG_02135","SJAG_04495","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[83810,83811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[97667,87943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[112533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[101607,105097,101608,105100,112503,99804,91186,101606,105094,105098,101973,105564,105095,90696,105563,101972,105565,105566,105568,99545,94439,105096,105562,105099,105567,94167,100616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[85403,104542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[95148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[90159,102652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"},{"annotations":[100619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94356,107740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72033,75077],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[87259,86851,108339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[89724,91889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[110127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01858":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03013":null,"SJAG_03032":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03771":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative breakdown","type":"exact"},{"name":"carbohydrate derivative catabolism","type":"exact"},{"name":"carbohydrate derivative degradation","type":"exact"}],"termid":"GO:1901136","terms_by_termid":{"GO:0006096":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006256":null,"GO:0009972":null,"GO:0015938":null,"GO:0034232":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0046135":null,"GO:0046168":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0097466":null,"GO:1901911":null}}


id: PBO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30","termid":"PBO:0051148"}


id: PBO:0062389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 10 pseudogene","termid":"PBO:0062389"}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: PBO:0083896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; found in stable complex with Nic96p and two other FG-nucleoproteins (Nsp1p and Nup49p)","termid":"PBO:0083896"}


id: PBO:0063960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1","termid":"PBO:0063960"}


id: CHEBI:22907
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleomycin","termid":"CHEBI:22907"}


id: PBO:0067486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 620, pseudogene","termid":"PBO:0067486"}


id: GO:1990469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex found in Drosophila consisting of the gene products of cuff, del and rhi. It regulates the licensing of transcription of dual-strand PIWI interacting RNA (piRNA) source loci by binding to dual-strand-cluster chromatin, probably via the H3K9me3-binding activity of Rhi. Rhi binding brings the putative termination cofactor Cuff in close proximity to the nascent piRNA precursor transcript which it appears to protect from degradation.","definition_xrefs":["PMID:24906153","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"PET complex","termid":"GO:1990923"},{"relation_name":"part_of","term_name":"germ cell nucleus","termid":"GO:0043073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Rhino-Deadlock-Cutoff Complex","synonyms":[{"name":"RDC complex","type":"exact"},{"name":"rhi-del-cuff complex","type":"exact"}],"termid":"GO:1990469"}


id: PBO:0034367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_in","termid":"PBO:0034367"}


id: FYPO:0001354
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115305],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115334,115692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115657],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115445,115625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115306],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_02392","SJAG_01143","SJAG_04280"],"name":"abnormal cellular component assembly during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02592","SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","pom1delta","mid1delta","sty1delta"],"synonyms":[{"name":"abnormal cellular component assembly at cellular level during vegetative growth","type":"exact"},{"name":"abnormal cellular component assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001354","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0063660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 1","termid":"PBO:0063660"}


id: PBO:0071258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 3","termid":"PBO:0071258"}


id: PBO:0060089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 36","termid":"PBO:0060089"}


id: PBO:0064671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 6","termid":"PBO:0064671"}


id: GO:0010480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a microsporocyte cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A microsporocyte is a diploid (2n) cell that undergoes meiosis and forms four haploid (1n) microspores; also called microspore mother cell and, in seed plants, pollen mother cell.","definition_xrefs":["PMID:16751349","CL:0000248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"sporocyte differentiation","termid":"GO:0048533"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microsporocyte differentiation","synonyms":[{"name":"pollen mother cell differentiation","type":"related"}],"termid":"GO:0010480"}


id: GO:0003917
data:
  {"annotated_genes":["SJAG_05193","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100579,100787],"is_not":false,"summary":null,"term":"GO:0003917"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853","GO:0140097"],"is_obsolete":false,"name":"DNA topoisomerase type I (single strand cut, ATP-independent) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:5.99.1.2-RXN","EC:5.6.2.1"],"synonyms":[{"name":"DNA topoisomerase I activity","type":"narrow"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"nicking-closing enzyme activity","type":"related"},{"name":"omega-protein activity","type":"related"},{"name":"relaxing enzyme activity","type":"related"},{"name":"swivelase activity","type":"related"},{"name":"topoisomerase","type":"broad"},{"name":"type I DNA topoisomerase activity","type":"exact"},{"name":"type I topoisomerase activity","type":"exact"},{"name":"untwisting enzyme activity","type":"related"}],"termid":"GO:0003917","terms_by_termid":{"GO:0003917":null}}


id: PBO:0072798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 4","termid":"PBO:0072798"}


id: PBO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemojuvelin BMP co-receptor","termid":"PBO:0050008"}


id: PATO:0000949
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being abnormally flattened or coalesced.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciated","termid":"PATO:0000949"}


id: PBO:0050472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A cluster","termid":"PBO:0050472"}


id: FYPO:0003206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to salt stress. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to salt stress","synonyms":[{"name":"decreased protein binding during cellular response to salt stress","type":"exact"},{"name":"decreased protein-protein interaction during salt stress","type":"exact"},{"name":"decreased protein-protein interaction in response to salt stress","type":"related"},{"name":"reduced protein-protein interaction during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003206"}


id: PBO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.2.3","termid":"PBO:0001819"}


id: PBO:0089671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific Rab GEF Spo13","termid":"PBO:0089671"}


id: PBO:0088202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc accumulation in cytosol; ortholog of the mouse KE4 and member of the ZIP (ZRT, IRT-like Protein) family","termid":"PBO:0088202"}


id: PBO:0041463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf95 antisense RNA 1","termid":"PBO:0041463"}


id: FYPO:0002157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal glucosyltransferase activity","termid":"FYPO:0001086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002157"}


id: PR:Q9UUN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prenylated Rab acceptor protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04300","PRO:DNx","PANTHER:PTHR19317:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.02c","secondary_identifiers":["UniProtKB:Q9UUN5"],"synonyms":[{"name":"Spom972h-RABAC1","type":"exact"}],"termid":"PR:Q9UUN5"}


id: GO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by circulating epinephrine-norepinephrine","termid":"GO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating epinephrine","synonyms":[{"name":"increased force of heart contraction by circulating adrenaline","type":"related"},{"name":"increased force of heart contraction by epinephrine in the bloodstream","type":"exact"},{"name":"positive regulation of heart contraction by circulating adrenaline","type":"related"},{"name":"positive regulation of heart contraction by circulating epinephrine","type":"related"}],"termid":"GO:0003088"}


id: PBO:0029507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_with_abnormal_shape","termid":"PBO:0029507"}


id: _global:instance_of
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"instance_of","termid":"_global:instance_of"}


id: FYPO:0006259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the length of the mitotic spindle is normal (i.e. indistinguishable from wild type) during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle morphology","termid":"FYPO:0007106"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle length during metaphase","synonyms":[{"name":"normal mitotic spindle length during metaphase during vegetative growth","type":"exact"},{"name":"normal spindle length during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal spindle length during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006259"}


id: GO:1903176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000059","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tyrosine 3-monooxygenase activity","synonyms":[{"name":"regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"regulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903176"}


id: PBO:0057737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1343","termid":"PBO:0057737"}


id: PBO:0051614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 receptor antagonist","termid":"PBO:0051614"}


id: FYPO:0005980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is decreased.","definition_xrefs":["PomBase:mah","PMID:27075176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament bundle assembly","termid":"FYPO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"decreased actin filament bundle assembly","synonyms":[{"name":"actin bundling decreased","type":"exact"},{"name":"decreased actin bundling","type":"exact"},{"name":"decreased actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"decreased actin filament bundle assembly during vegetative growth","type":"exact"},{"name":"reduced filament bundle assembly","type":"exact"}],"termid":"FYPO:0005980"}


id: GO:0000976
data:
  {"annotated_genes":["SJAG_02048","SJAG_00698","SJAG_04712","SJAG_06576","SJAG_00163","SJAG_02311","SJAG_00958","SJAG_04584","SJAG_02709","SJAG_02149","SJAG_05153","SJAG_05343","SJAG_03538","SJAG_02472","SJAG_04092","SJAG_02922","SJAG_02569","SJAG_06599","SJAG_01725","SJAG_01243","SJAG_00421","SJAG_01532","SJAG_04421","SJAG_00124","SJAG_02752","SJAG_01707","SJAG_03120","SJAG_02415","SJAG_01694","SJAG_00861","SJAG_04839","SJAG_02052","SJAG_04036","SJAG_03014","SJAG_04855","SJAG_02810","SJAG_01583","SJAG_03735","SJAG_02254","SJAG_03911","SJAG_04749","SJAG_03241","SJAG_02938","SJAG_00304","SJAG_00266","SJAG_01062","SJAG_00792","SJAG_03388","SJAG_04249","SJAG_01307","SJAG_03183","SJAG_03484","SJAG_03879","SJAG_05337","SJAG_02138","SJAG_00202","SJAG_01740","SJAG_03519","SJAG_03473","SJAG_05331","SJAG_00979","SJAG_03622","SJAG_00802","SJAG_05006","SJAG_02730","SJAG_02326","SJAG_05247","SJAG_01916","SJAG_04813","SJAG_03143","SJAG_02242","SJAG_02218","SJAG_00987","SJAG_00926","SJAG_01441","SJAG_02691","SJAG_04191","SJAG_01157","SJAG_04611","SJAG_05288","SJAG_03918","SJAG_04388","SJAG_00037","SJAG_03923","SJAG_00693","SJAG_00210","SJAG_01343","SJAG_03354","SJAG_00664","SJAG_04009","SJAG_05339","SJAG_00073","SJAG_00692","SJAG_00386","SJAG_02747","SJAG_05253","SJAG_03346","SJAG_02252","SJAG_02406","SJAG_01930","SJAG_02956","SJAG_04917","SJAG_00896","SJAG_02813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71208,72055,75384,92975,99279,104630,109805],"is_not":false,"summary":null,"term":"GO:0000976"},{"annotations":[112226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000987"},{"annotations":[86864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001046"},{"annotations":[91312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001018"},{"annotations":[89345,112600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001165"},{"annotations":[108102,105324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001164"},{"annotations":[105914,99513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001163"},{"annotations":[85668,91875,92456,103160,105359,102408,98855,84682,93552,93701,104144,84626,109576,99718,102888,94287,77245,98390,98439,107228,93475,95656,102523,104977,88938,90897,100600,108052,90914,101992,103745,93702,88647,93104,97645,96276,102266,83822,106899,95957,96650,108092,112761,86300,89472,104805,104392,107069,100935,84259,92753,100605,113614,92221,110737,110247,89412,93705,105358,109854,79352,93235,88092,93703,84188,107053,108093,85249,93704,98206,103214,107037,94597,105529,110986,112229,89894,112623,114178,105869,105221,90251,114458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[103215,104978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[108053,91761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[103746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"},{"annotations":[111777,114179,114050,98391,85005,88821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000977"},{"annotations":[95732,84413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[95734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[95735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[99232,91764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"},{"annotations":[98441,103965,96037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulatory region nucleic acid binding","termid":"GO:0001067"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":104,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00073":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00202":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00692":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00896":null,"SJAG_00926":null,"SJAG_00958":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01707":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02242":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02691":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02747":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02813":null,"SJAG_02922":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03014":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_03923":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04611":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04917":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05253":null,"SJAG_05288":null,"SJAG_05331":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription cis-regulatory region binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000975","GO:0044212","GO:0000984","GO:0001017"],"synonyms":[{"name":"bacterial-type RNA polymerase regulatory region DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"eubacterial-type RNA polymerase regulatory region DNA binding","type":"narrow"},{"name":"eubacterial-type RNA polymerase regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"regulatory region DNA binding","type":"broad"},{"name":"transcription regulatory region DNA binding","type":"related"},{"name":"transcription regulatory region sequence-specific DNA binding","type":"exact"}],"termid":"GO:0000976","terms_by_termid":{"GO:0000976":null,"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0000987":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0001018":null,"GO:0001046":null,"GO:0001147":null,"GO:0001162":null,"GO:0001163":null,"GO:0001164":null,"GO:0001165":null,"GO:0044377":null}}


id: PBO:0060866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 9","termid":"PBO:0060866"}


id: PBO:0004623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate kinase (predicted)","termid":"PBO:0004623"}


id: PBO:0028947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate-cysteine_ligase_activity","termid":"PBO:0028947"}


id: GO:1902485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-cysteine.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:12941942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-cysteine binding","termid":"GO:1902485"}


id: PBO:0076307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 3","termid":"PBO:0076307"}


id: GO:0006749
data:
  {"annotated_genes":["SJAG_02599","SJAG_03316","SJAG_05181","SJAG_00903","SJAG_04858","SJAG_01351","SJAG_01612","SJAG_00988","SJAG_03494","SJAG_04726","SJAG_01995","SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84203,95431,98953,101374],"is_not":false,"summary":null,"term":"GO:0006749"},{"annotations":[104597,114282,89479,93189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[98415,94542,104885,95361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_02599":null,"SJAG_03316":null,"SJAG_03494":null,"SJAG_04726":null,"SJAG_04858":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione metabolism","type":"exact"},{"name":"oxidized glutathione reduction","type":"narrow"}],"termid":"GO:0006749","terms_by_termid":{"GO:0006749":null,"GO:0006750":null,"GO:0006751":null}}


id: GO:0035164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an embryonic mesoderm-derived hemocyte precursor cell acquires the specialized features of the phagocytic blood-cell type, the plasmatocyte.","definition_xrefs":["PMID:11921077","GOC:bf","PMID:8174791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic hemocyte differentiation","termid":"GO:0035163"},{"relation_name":"is_a","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic plasmatocyte differentiation","synonyms":[{"name":"embryonic plasmatocyte cell differentiation","type":"exact"}],"termid":"GO:0035164"}


id: FYPO:0007785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested at the G2/MI phase transition. Cells arrested at the G2/MI transition down-even in the presence of nutrients, in contrast with arrest at the mitotic G2/M transition, where cells continue to grow.","definition_xrefs":["PMID:28476936","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in meiosis II","termid":"FYPO:0002223"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"abolished growth during meiotic cell cycle arrest at G2/M1","type":"related"}],"termid":"FYPO:0007785"}


id: FYPO:0004952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the prospore membrane begins to form and enclose the nucleus, but the leading edge does not close completely, leaving a gap in the membrane.","definition_xrefs":["PMID:17951524","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000121","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"incomplete prospore membrane closure","synonyms":[{"name":"incomplete enclosure of nucleus by forespore membrane","type":"related"},{"name":"incomplete engulfment of nucleus by forespore membrane","type":"related"},{"name":"incomplete forespore membrane closure","type":"exact"}],"termid":"FYPO:0004952"}


id: GO:0140707
data:
  {"annotated_genes":["SJAG_03449","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115689,87530,85286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"}]},"cv_name":"molecular_function","definition":"Binding to chromatin and the nuclear inner membrane, in order to establish and maintain the heterochromatin location and organization, or to enable equal segregation of the nuclear membrane during mitosis.","definition_xrefs":["PMID:24184107","PMID:31048766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"chromatin-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0140707","terms_by_termid":{"GO:0062239":null}}


id: PATO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in an organ by virtue of the multiplication of an equivalent dose to that organ multiplied by the tissue weighting factor for that organ.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation effective dose","termid":"PATO:0001747"}


id: GO:0051352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ligase activity","synonyms":[{"name":"down regulation of ligase activity","type":"exact"},{"name":"down-regulation of ligase activity","type":"exact"},{"name":"downregulation of ligase activity","type":"exact"},{"name":"inhibition of ligase activity","type":"narrow"},{"name":"ligase inhibitor","type":"exact"}],"termid":"GO:0051352"}


id: PBO:0067651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 826, pseudogene","termid":"PBO:0067651"}


id: PBO:0090852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter Tna1","termid":"PBO:0090852"}


id: GO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Arg-Xaa bond in Lys-Arg-Xaa and Arg-Arg-Xaa to process Yeast alpha-factor pheromone and killer toxin precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete kexin activity (obsolete GO:0004290)","synonyms":[{"name":"Kex 2p proteinase","type":"narrow"},{"name":"Kex2 endopeptidase","type":"narrow"},{"name":"Kex2 endoprotease","type":"narrow"},{"name":"Kex2 endoproteinase","type":"narrow"},{"name":"Kex2 protease","type":"narrow"},{"name":"Kex2 proteinase","type":"narrow"},{"name":"Kex2-like endoproteinase","type":"narrow"},{"name":"Kex2-like precursor protein processing endoprotease","type":"narrow"},{"name":"andrenorphin-Gly-generating enzyme","type":"related"},{"name":"endoproteinase Kex2p","type":"related"},{"name":"gene KEX2 dibasic proteinase","type":"narrow"},{"name":"kexin activity","type":"exact"},{"name":"paired-basic endopeptidase activity","type":"related"},{"name":"prohormone-processing KEX2 proteinase","type":"narrow"},{"name":"prohormone-processing endoprotease activity","type":"related"},{"name":"prohormone-processing proteinase activity","type":"related"},{"name":"protease KEX2","type":"related"},{"name":"proteinase Kex2p","type":"related"},{"name":"proteinase yscF activity","type":"narrow"},{"name":"yeast KEX2 protease activity","type":"narrow"},{"name":"yeast cysteine proteinase F","type":"related"}],"termid":"GO:0004290"}


id: PBO:0039569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 63","termid":"PBO:0039569"}


id: GO:0044464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cell, the basic structural and functional unit of all organisms.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell part (obsolete GO:0044464)","synonyms":[{"name":"cellular subcomponent","type":"exact"},{"name":"protoplast","type":"related"}],"termid":"GO:0044464"}


id: GO:0004911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-2 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-2 receptor activity","synonyms":[{"name":"IL-2 receptor activity","type":"exact"},{"name":"IL-2R","type":"exact"}],"termid":"GO:0004911"}


id: GO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + myo-inositol hexakisphosphate = phosphate + 1L-myo-inositol 1,2,3,4,6-pentakisphosphate.","definition_xrefs":["EC:3.1.3.72","MetaCyc:3.1.3.72-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-phytase activity","secondary_identifiers":["RHEA:13001"],"synonyms":[{"name":"myo-inositol-hexakisphosphate 5-phosphohydrolase activity","type":"related"}],"termid":"GO:0050533"}


id: PBO:0046850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 12 pseudogene 1","termid":"PBO:0046850"}


id: PBO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCAF8 divergent transcript","termid":"PBO:0044601"}


id: PR:P49373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfs1 gene.","definition_xrefs":["UniProtKB:P49373","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor S-II (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.03c","synonyms":[{"name":"Spom972h-tfs1","type":"exact"},{"name":"TFIIS (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P49373"}


id: PBO:0053088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1F","termid":"PBO:0053088"}


id: PBO:0055289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2716","termid":"PBO:0055289"}


id: GO:0034355
data:
  {"annotated_genes":["SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85228],"is_not":false,"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"Any process that generates nicotinamide adenine dinucleotide (NAD) from derivatives of it, without de novo synthesis; salvage is usually from the degradation products nicotinic acid (Na) and nicotinamide (Nam).","definition_xrefs":["GOC:mah","PMID:27374990","PMID:12648681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"},{"relation_name":"is_a","term_name":"pyridine nucleotide salvage","termid":"GO:0019365"},{"relation_name":"is_a","term_name":"purine nucleotide salvage","termid":"GO:0032261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NAD salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD salvage pathway","type":"exact"}],"termid":"GO:0034355","terms_by_termid":{"GO:0034355":null}}


id: GO:2000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in cardiac right atrium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:2000161)","termid":"GO:2000161"}


id: PBO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 6","termid":"PBO:0048494"}


id: PBO:0063223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 3","termid":"PBO:0063223"}


id: PBO:0031249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_organization_during_vegetative_growth","termid":"PBO:0031249"}


id: PBO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A","termid":"PBO:0046042"}


id: GO:1901897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:BHF","PMID:19708671","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"}


id: PBO:0049288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 7, pseudogene","termid":"PBO:0049288"}


id: PBO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_transport","termid":"PBO:0031714"}


id: PBO:0039854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 20","termid":"PBO:0039854"}


id: GO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046001"}


id: GO:0030319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular di-, tri-valent inorganic anion homeostasis (obsolete GO:0030319)","synonyms":[{"name":"cellular di-, tri-valent inorganic anion homeostasis","type":"exact"}],"termid":"GO:0030319"}


id: GO:0044634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the alternative pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, alternative pathway in another organism (obsolete GO:0044634)","synonyms":[{"name":"negative regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044634"}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: GO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the concentration of calcium ions in the cytosol after fertilization or the physiological activation of an egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytosolic calcium ion concentration involved in egg activation","synonyms":[{"name":"elevation of cytosolic calcium ion concentration involved in egg activation","type":"exact"}],"termid":"GO:0060470"}


id: GO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"secondary metabolite catabolic process","synonyms":[{"name":"secondary metabolite breakdown","type":"exact"},{"name":"secondary metabolite catabolism","type":"exact"},{"name":"secondary metabolite degradation","type":"exact"}],"termid":"GO:0090487"}


id: GO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the urogenital tract.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal tolerance induction","termid":"GO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in urogenital tract","termid":"GO:0002425"}


id: PBO:0044258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR Ig-like cell adhesion molecule","termid":"PBO:0044258"}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: GO:0005638
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"},{"relation_name":"part_of","term_name":"nuclear lamina","termid":"GO:0005652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0034399"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0034399"],"is_obsolete":false,"name":"lamin filament","synonyms":[{"name":"type V intermediate filament","type":"exact"}],"termid":"GO:0005638"}


id: PBO:0086397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytosolic protein of unknown function","termid":"PBO:0086397"}


id: GO:0103072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acyl CoA = formyl-CoA + an odd numbered straight chain 2,3,4-saturated fatty aldehyde.","definition_xrefs":["EC:4.1.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"straight chain (R)-2-hydroxy fatty acyl-CoA lyase activity","secondary_identifiers":["MetaCyc:RXN66-475"],"termid":"GO:0103072"}


id: GO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin D receptor activity","synonyms":[{"name":"PGD receptor activity","type":"related"},{"name":"PGD(2) receptor activity","type":"exact"}],"termid":"GO:0004956"}


id: PBO:0005359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUA5/yciO/yrdC family protein Sua5 (predicted)","termid":"PBO:0005359"}


id: PBO:0069434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 699, pseudogene","termid":"PBO:0069434"}


id: FYPO:0003405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased glyoxalase III activity","synonyms":[{"name":"reduced glyoxalase III activity","type":"exact"}],"termid":"FYPO:0003405"}


id: FYPO:0005846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000641","FYPO:0000002","FYPO:0000661","FYPO:0005447","FYPO:0000707"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"abnormal H3-K9 specific histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0005846"}


id: GO:0140432
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87870],"is_not":false,"summary":null,"term":"GO:0140432"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in 5'OH-RNA according to the reaction 5'OH-RNA + H20 = 5'OH-NpN (dinucleotide) + 5'P-RNA.","definition_xrefs":["PMID:31777937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"5'-hydroxyl dinucleotide hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140432","terms_by_termid":{"GO:0140432":null}}


id: PR:P15258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ral2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ral2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.05c","synonyms":[{"name":"Spom972h-ral2","type":"exact"}],"termid":"PR:P15258"}


id: PBO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase Lcf1","termid":"PBO:0003767"}


id: GO:0047876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligoglycosylglucosylceramide = ceramide + oligoglycosylglucose.","definition_xrefs":["MetaCyc:ENDOGLYCOSYLCERAMIDASE-RXN","EC:3.2.1.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"endoglycosylceramidase activity","secondary_identifiers":["RHEA:22288"],"synonyms":[{"name":"EGCase activity","type":"related"},{"name":"endo-glucosylceramidase activity","type":"related"},{"name":"endoglycoceramidase activity","type":"related"},{"name":"glycosyl-N-acetyl-sphingosine 1,1-beta-D-glucanohydrolase activity","type":"related"},{"name":"oligoglycosylglucosylceramide glycohydrolase activity","type":"related"}],"termid":"GO:0047876"}


id: PBO:0042345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD81 antisense RNA 1","termid":"PBO:0042345"}


id: PBO:0063866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary cilia formation","termid":"PBO:0063866"}


id: PBO:0061521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P) dependent steroid dehydrogenase-like","termid":"PBO:0061521"}


id: SO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved a contact with another molecule.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"molecular_contact_region","synonyms":[{"name":"molecular contact region","type":"related"}],"termid":"SO:0100002"}


id: PBO:0047184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 201 member B","termid":"PBO:0047184"}


id: PBO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","termid":"PBO:0001674"}


id: PBO:0043198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase B","termid":"PBO:0043198"}


id: PBO:0011989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2 (predicted)","termid":"PBO:0011989"}


id: GO:0007416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction assembly","termid":"GO:0034329"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"synapse assembly","secondary_identifiers":["Wikipedia:Synaptogenesis"],"synonyms":[{"name":"synapse biogenesis","type":"exact"},{"name":"synaptogenesis","type":"exact"}],"termid":"GO:0007416"}


id: PBO:0048819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 3","termid":"PBO:0048819"}


id: PBO:0089150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein TPR repeat-like","termid":"PBO:0089150"}


id: FYPO:0004586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of caffeine and hydroxyurea. Cells stop growing (and may die) at concentrations of caffeine and hydroxyurea that allow wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:10757807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caffeine and hydroxyurea","synonyms":[{"name":"hypersensitive to caffeine and hydroxyurea","type":"exact"},{"name":"sensitive to caffeine and HU","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to caffeine and hydroxyurea during vegetative growth","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea in combination","type":"exact"}],"termid":"FYPO:0004586"}


id: GO:1905268
data:
  {"annotated_genes":["SJAG_02723","SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[104656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization.","definition_xrefs":["GOC:pr","GO_REF:0000058","PMID:654321","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"negatively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045798","GO:1903309"],"synonyms":[{"name":"down regulation of chromatin assembly or disassembly","type":"related"},{"name":"down regulation of chromatin organisation","type":"exact"},{"name":"down regulation of chromatin organization","type":"exact"},{"name":"down regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"down-regulation of chromatin assembly or disassembly","type":"related"},{"name":"down-regulation of chromatin organisation","type":"exact"},{"name":"down-regulation of chromatin organization","type":"exact"},{"name":"down-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"downregulation of chromatin assembly or disassembly","type":"related"},{"name":"downregulation of chromatin organisation","type":"exact"},{"name":"downregulation of chromatin organization","type":"exact"},{"name":"downregulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"inhibition of chromatin assembly or disassembly","type":"narrow"},{"name":"inhibition of chromatin organisation","type":"narrow"},{"name":"inhibition of chromatin organization","type":"narrow"},{"name":"inhibition of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"negative regulation of chromatin assembly or disassembly","type":"related"},{"name":"negative regulation of chromatin assembly/disassembly","type":"exact"},{"name":"negative regulation of chromatin modification","type":"related"},{"name":"negative regulation of chromatin organisation","type":"exact"},{"name":"negative regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905268","terms_by_termid":{"GO:0060906":null,"GO:0061188":null}}


id: PBO:0069810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1096, pseudogene","termid":"PBO:0069810"}


id: PBO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_processing_during_vegetative_growth","termid":"PBO:0035889"}


id: PR:O94293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.08 gene.","definition_xrefs":["UniProtKB:O94293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C887.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.08","synonyms":[{"name":"Spom972h-SPBC887.08","type":"exact"}],"termid":"PR:O94293"}


id: PBO:0004043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a (predicted)","termid":"PBO:0004043"}


id: SO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary between an intron and an exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_junction","synonyms":[{"name":"splice boundary","type":"exact"},{"name":"splice junction","type":"exact"}],"termid":"SO:0001421"}


id: GO:0048568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic organ development","synonyms":[{"name":"embryonic organogenesis","type":"exact"}],"termid":"GO:0048568"}


id: PBO:0026725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_proteasome_localization_to_nuclear_periphery","termid":"PBO:0026725"}


id: GO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric mesenchymal tissue are generated and organized. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"metanephric mesenchyme development","termid":"GO:0072075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"}


id: GO:0010678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that decreases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates carried out by repression of transcription.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-templated (obsolete GO:0010678)","synonyms":[{"name":"negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by repression of transcription","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by transcriptional repression","type":"exact"}],"termid":"GO:0010678"}


id: PR:Q8WZK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC839.02 gene.","definition_xrefs":["UniProtKB:Q8WZK5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related trafficking adapter C839.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.02","synonyms":[{"name":"Spom972h-SPBC839.02","type":"exact"}],"termid":"PR:Q8WZK5"}


id: PBO:0065331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 55","termid":"PBO:0065331"}


id: GO:0010270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the oxygen evolving complex (OEC) of photosystem II on a thylakoid membrane. The OEC protects the calcium-4 manganese-5 oxide cluster which is bound to the D1 and CP43 proteins. The exact protein composition of the OEC varies between cyanobacteria and plants, and in plants consists of three extrinsic nuclear-encoded polypeptides: PsbO, PsbP and PsbQ.","definition_xrefs":["PMID:16282331","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II assembly","termid":"GO:0010207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"photosystem II oxygen evolving complex assembly","synonyms":[{"name":"OEC (PSII) ASSEMBLY","type":"exact"}],"termid":"GO:0010270"}


id: PBO:0056354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 domain containing 3","termid":"PBO:0056354"}


id: GO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + O2 = 2-phenylacetamide + CO2 + H2O.","definition_xrefs":["EC:1.13.12.9","RHEA:10712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylalanine 2-monooxygenase activity","secondary_identifiers":["MetaCyc:PHENYLALANINE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R00690"],"synonyms":[{"name":"L-phenylalanine oxidase (deaminating and decarboxylating)","type":"related"},{"name":"L-phenylalanine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"l-phenylalanine oxidase (deaminating and decarboxylating) activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating) oxidase activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating)oxidase activity","type":"related"}],"termid":"GO:0050172"}


id: PBO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 36","termid":"PBO:0071738"}


id: GO:0031383
data:
  {"annotated_genes":["SJAG_00514","SJAG_03453","SJAG_02379","SJAG_01794","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89657,87039,107527,84123,86069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mating projection biogenesis","type":"related"}],"termid":"GO:0031383","terms_by_termid":{"GO:1902917":null}}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_03453","SJAG_02379","SJAG_01794","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107527,89657,86069,84123,87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: PBO:0047318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 2","termid":"PBO:0047318"}


id: PBO:0031261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_telomere","termid":"PBO:0031261"}


id: PBO:0027893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_dissociated_from_spindle","termid":"PBO:0027893"}


id: PBO:0055244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2671","termid":"PBO:0055244"}


id: GO:0004177
data:
  {"annotated_genes":["SJAG_00969","SJAG_06636","SJAG_01088","SJAG_00181","SJAG_03744","SJAG_01896","SJAG_03022","SJAG_02033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84721],"is_not":false,"summary":null,"term":"GO:0004177"},{"annotations":[99448,106212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004239"},{"annotations":[89570,84472,94014,106214,99450,84723,110608,101909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain.","definition_xrefs":["PMID:24157837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00969":null,"SJAG_01088":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_03022":null,"SJAG_03744":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0008233","GO:0016787"],"is_obsolete":false,"name":"aminopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2534096","MetaCyc:RXN0-5052","EC:3.4.11.-","Reactome:R-HSA-983162","Reactome:R-HSA-1236954"],"termid":"GO:0004177","terms_by_termid":{"GO:0004177":null,"GO:0004239":null,"GO:0070006":null}}


id: FYPO:0005760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["GO:0098610","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased cell-cell adhesion","synonyms":[{"name":"increased adhesion between unicellular organisms","type":"exact"},{"name":"increased cell-cell adhesion during mitotic cell cycle","type":"related"},{"name":"increased cell-cell adhesion during vegetative growth","type":"exact"}],"termid":"FYPO:0005760"}


id: PBO:0089926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body assembly WD repeat protein","termid":"PBO:0089926"}


id: PBO:0038721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 16","termid":"PBO:0038721"}


id: PBO:0017959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family Utp18 (predicted)","termid":"PBO:0017959"}


id: FYPO:0000189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mRNA splicing via the spliceosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal mRNA splicing, via spliceosome","synonyms":[{"name":"abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abnormal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0000189"}


id: RO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"RO:0002454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasite_of","synonyms":[{"name":"epiparasite of","type":"related"},{"name":"hyperparasitoid of","type":"related"}],"termid":"RO:0002553"}


id: GO:0140847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that stops, prevents or reduces the transition from the initiation to the elongation phases of transcription by RNA polymerase II.","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140845"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase II promoter clearance","termid":"GO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140847"}


id: GO:0030339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-acyl ethyl ester + H2O = a long-chain carboxylic acid + ethanol.","definition_xrefs":["EC:3.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty-acyl-ethyl-ester synthase activity","secondary_identifiers":["RHEA:16641","MetaCyc:FATTY-ACYL-ETHYL-ESTER-SYNTHASE-RXN"],"synonyms":[{"name":"FAEE synthase activity","type":"related"},{"name":"FAEES activity","type":"related"},{"name":"fatty-acyl ethyl ester synthase","type":"exact"},{"name":"long-chain-fatty-acyl-ethyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0030339"}


id: PBO:0059600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 12","termid":"PBO:0059600"}


id: PBO:0110262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor and polyadenylation specificity factor complex RNA-binding protein Rna15","termid":"PBO:0110262"}


id: SOFP:dicistronic
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"true if transcript codes for >1 non-overlapping CDSs","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic","termid":"SOFP:dicistronic"}


id: PBO:0090112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit","termid":"PBO:0090112"}


id: PBO:0084721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; exposed to the mitochondrial matrix; associates with mitochondrial ribosomes; NOT required for respiratory growth; homolog of human Letm1, a protein implicated in Wolf-Hirschhorn syndrome","termid":"PBO:0084721"}


id: GO:1905164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagosome maturation.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of phagosome maturation","termid":"GO:1905162"},{"relation_name":"positively_regulates","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagosome maturation","synonyms":[{"name":"activation of phagosome maturation","type":"narrow"},{"name":"up regulation of phagosome maturation","type":"exact"},{"name":"up-regulation of phagosome maturation","type":"exact"},{"name":"upregulation of phagosome maturation","type":"exact"}],"termid":"GO:1905164"}


id: GO:1905235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quercetin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:24914722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to quercetin","termid":"GO:1905235"}


id: GO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type II interferon","termid":"GO:0034341"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type II interferon","synonyms":[{"name":"cellular response to gamma-interferon","type":"related"},{"name":"cellular response to immune interferon","type":"exact"},{"name":"cellular response to interferon-gamma","type":"broad"},{"name":"cellular response to type II IFN","type":"broad"}],"termid":"GO:0071346"}


id: MOD:01585
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and a glycine residue by an ester bond to form O-glycyl-L-serine.","definition_xrefs":["PubMed:17502423","RESID:AA0495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(aminoacetyl)oxy]propanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl serine ester (Gly-Ser) (interchain with S-...)","type":"exact"},{"name":"CROSSLNK Glycyl serine ester (Ser-Gly) (interchain with G-...)","type":"exact"},{"name":"O-(glycyl)-L-serine","type":"exact"},{"name":"O3-(aminoacetyl)serine","type":"exact"},{"name":"serine glycinate ester","type":"exact"}],"termid":"MOD:01585"}


id: PBO:0042371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 molecule","termid":"PBO:0042371"}


id: PBO:0077862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 3","termid":"PBO:0077862"}


id: FYPO:0007710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is lower than normal.","definition_xrefs":["PomBase:mah","PMID:33723569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Ssb1 foci","synonyms":[{"name":"decreased number of RPA foci","type":"exact"},{"name":"decreased number of Rad11 foci","type":"exact"},{"name":"decreased number of Rpa1 foci","type":"exact"},{"name":"decreased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"decreased number of Ssb1 foci during vegetative growth","type":"exact"},{"name":"reduced number of Ssb1 foci","type":"exact"}],"termid":"FYPO:0007710"}


id: PBO:0030299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle","termid":"PBO:0030299"}


id: GO:0033385
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105656,95748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving geranylgeranyl diphosphate, a polyprenol compound involved in the biosynthesis of a variety of terpenoids including chlorophylls, carotenoids, tocopherols, plastoquinones, and the plant hormones gibberellins.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"geranylgeranyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranylgeranyl diphosphate metabolism","type":"exact"},{"name":"geranylgeranyldiphosphate metabolic process","type":"exact"}],"termid":"GO:0033385","terms_by_termid":{"GO:0033386":null}}


id: PBO:0040511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 1B","termid":"PBO:0040511"}


id: GO:0014716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Skeletal muscle satellite cell asymmetric division that occurs during a process in which damaged muscle tissue is being rebuilt.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle satellite stem cell asymmetric division","termid":"GO:0014833"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration","termid":"GO:0014834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite stem cell asymmetric division involved in skeletal muscle regeneration","synonyms":[{"name":"satellite cell asymmetric division involved in skeletal muscle regeneration","type":"exact"}],"termid":"GO:0014716"}


id: GO:0008437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of thyrotropin-releasing hormone (TRH), a hormone released by the mammalian hypothalamus into the hypophyseal-portal circulation in response to neural and/or chemical stimuli. Upon receptor binding, TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0005515","GO:0005488","GO:0098772"],"is_obsolete":false,"name":"thyrotropin-releasing hormone activity","synonyms":[{"name":"TRH activity","type":"exact"},{"name":"thyrotropin releasing hormone activity","type":"exact"}],"termid":"GO:0008437"}


id: GO:0036211
data:
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id: RO:HOM0000061
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Xenology that involves genes that ended up in a given genome as a result of a combination of vertical inheritance and horizontal gene transfer.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_xenology_relationship_with","termid":"RO:HOM0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pseudoparalogy_relationship_with","synonyms":[{"name":"pseudoparalogous to","type":"exact"}],"termid":"RO:HOM0000061"}


id: PBO:0064801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1CB divergent transcript","termid":"PBO:0064801"}


id: PBO:0088395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth3","termid":"PBO:0088395"}


id: PBO:0089690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCP1 homology domain, HAD hydrolase superfamily","termid":"PBO:0089690"}


id: PBO:0070618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 2","termid":"PBO:0070618"}


id: GO:0120316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of the sperm flagellum, the microtubule-based axoneme and associated structures that are part of a sperm flagellum (or cilium).","definition_xrefs":["GOC:krc","PMID:32791035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"motile cilium assembly","termid":"GO:0044458"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"},{"relation_name":"part_of","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"sperm flagellum assembly","termid":"GO:0120316"}


id: PBO:0054623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2028","termid":"PBO:0054623"}


id: PBO:0017917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transport protein, tspO homolog (predicted)","termid":"PBO:0017917"}


id: PR:Q9USW9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgf29 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA-associated factor 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.07c","synonyms":[{"name":"Spom972h-sgf29","type":"exact"}],"termid":"PR:Q9USW9"}


id: GO:1901558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metformin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to metformin","termid":"GO:1901558"}


id: PBO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0012551"}


id: PBO:0073593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOC2 leucine rich repeat scaffold protein","termid":"PBO:0073593"}


id: GO:0019717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptosome (obsolete GO:0019717)","secondary_identifiers":["Wikipedia:Synaptosome"],"synonyms":[{"name":"synaptosome","type":"exact"}],"termid":"GO:0019717"}


id: PBO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase (predicted)","termid":"PBO:0000864"}


id: GO:0021793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone is directed to a specific target site in response to a repulsive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:jid","PMID:14699587","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemorepulsion of axon","termid":"GO:0061643"},{"relation_name":"part_of","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of branchiomotor axon","synonyms":[{"name":"negative chemotaxis of branchiomotor axon","type":"exact"}],"termid":"GO:0021793"}


id: PR:O13786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pep7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar segregation protein pep7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.08","synonyms":[{"name":"Spom972h-pep7","type":"exact"}],"termid":"PR:O13786"}


id: GO:0019874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,8-diazacyclotetradecane-2,9-dione + H2O = N-(6-aminohexanoyl)-6-aminohexanoate.","definition_xrefs":["EC:3.5.2.12","RHEA:16225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"6-aminohexanoate-cyclic-dimer hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r1097","KEGG_REACTION:R03448","MetaCyc:3.5.2.12-RXN"],"synonyms":[{"name":"1,8-diazacyclotetradecane-2,9-dione lactamhydrolase activity","type":"related"}],"termid":"GO:0019874"}


id: GO:0034890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan diol = endosulfan ether + H2O.","definition_xrefs":["UM-BBD_reactionID:r1386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"endosulfan diol hydrolyase (cyclizing) activity","termid":"GO:0034890"}


id: PBO:0053742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 968","termid":"PBO:0053742"}


id: PBO:0110333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 3","termid":"PBO:0110333"}


id: PBO:0050170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 26","termid":"PBO:0050170"}


id: PBO:0053570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 588","termid":"PBO:0053570"}


id: PBO:0004298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM-MHF complex subunit Mhf1","termid":"PBO:0004298"}


id: GO:0033927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltohexaose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltohexaosidase activity","secondary_identifiers":["MetaCyc:3.2.1.98-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltohexaohydrolase activity","type":"related"},{"name":"G6-amylase activity","type":"related"},{"name":"exo-maltohexaohydrolase activity","type":"related"},{"name":"maltohexaose-producing amylase activity","type":"related"}],"termid":"GO:0033927"}


id: GO:1903993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein stabilization.","definition_xrefs":["PMID:18573880","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein stabilization (obsolete GO:1903993)","synonyms":[{"name":"down regulation of lysosomal protein stabilization","type":"narrow"},{"name":"down regulation of positive regulation of protein stability","type":"exact"},{"name":"down regulation of protein sequestering","type":"related"},{"name":"down regulation of protein stabilization","type":"exact"},{"name":"down regulation of protein stabilization activity","type":"related"},{"name":"down-regulation of lysosomal protein stabilization","type":"narrow"},{"name":"down-regulation of positive regulation of protein stability","type":"exact"},{"name":"down-regulation of protein sequestering","type":"related"},{"name":"down-regulation of protein stabilization","type":"exact"},{"name":"down-regulation of protein stabilization activity","type":"related"},{"name":"downregulation of lysosomal protein stabilization","type":"narrow"},{"name":"downregulation of positive regulation of protein stability","type":"exact"},{"name":"downregulation of protein sequestering","type":"related"},{"name":"downregulation of protein stabilization","type":"exact"},{"name":"downregulation of protein stabilization activity","type":"related"},{"name":"inhibition of lysosomal protein stabilization","type":"narrow"},{"name":"inhibition of positive regulation of protein stability","type":"narrow"},{"name":"inhibition of protein sequestering","type":"related"},{"name":"inhibition of protein stabilization","type":"narrow"},{"name":"inhibition of protein stabilization activity","type":"related"},{"name":"negative regulation of lysosomal protein stabilization","type":"narrow"},{"name":"negative regulation of positive regulation of protein stability","type":"exact"},{"name":"negative regulation of protein sequestering","type":"related"},{"name":"negative regulation of protein stabilization","type":"exact"},{"name":"negative regulation of protein stabilization activity","type":"related"}],"termid":"GO:1903993"}


id: PATO:0001264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light yellow","synonyms":[{"name":"blond","type":"related"}],"termid":"PATO:0001264"}


id: GO:0035290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8.","definition_xrefs":["PMID:1360402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk segmentation","termid":"GO:0035290"}


id: PR:Q10434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-actin-capping protein subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin-capping protein subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.07","secondary_identifiers":["UniProtKB:Q10434"],"synonyms":[{"name":"SPAC12B10.07","type":"related"},{"name":"Spom972h-CAPZA2","type":"exact"}],"termid":"PR:Q10434"}


id: PBO:0056670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 8","termid":"PBO:0056670"}


id: GO:0048306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex in the presence of calcium.","definition_xrefs":["PMID:10485905","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent protein binding","termid":"GO:0048306"}


id: PBO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (predicted)","termid":"PBO:0002198"}


id: GO:0090174
data:
  {"annotated_genes":["SJAG_03403","SJAG_00810","SJAG_03347","SJAG_02595","SJAG_04978","SJAG_03552","SJAG_01633","SJAG_00204","SJAG_03536","SJAG_03889","SJAG_05184","SJAG_00171","SJAG_04513","SJAG_01697","SJAG_04739","SJAG_03848","SJAG_00826","SJAG_02241","SJAG_00557","SJAG_02587","SJAG_00430","SJAG_03670","SJAG_04023","SJAG_01324","SJAG_00380","SJAG_02315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[113041,97273,90490,95663,86382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[92125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[84749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[101863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[86775,113673,97238,113634,114648,94272,103550,97004,96366,104853,108850,105833,96050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[113743,104193,91734,105983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of two lipid bilayers to form a single organelle membrane.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"organelle membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090174","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null}}


id: PBO:0062799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OS9 endoplasmic reticulum lectin","termid":"PBO:0062799"}


id: PBO:0003489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein (predicted)","termid":"PBO:0003489"}


id: GO:1902661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24277933","GO_REF:0000058","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"positively_regulates","term_name":"glucose mediated signaling pathway","termid":"GO:0010255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glucose mediated signaling pathway","synonyms":[{"name":"activation of glucose mediated signaling pathway","type":"narrow"},{"name":"activation of glucose mediated signalling","type":"narrow"},{"name":"positive regulation of glucose mediated signalling","type":"exact"},{"name":"up regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up regulation of glucose mediated signalling","type":"exact"},{"name":"up-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucose mediated signalling","type":"exact"},{"name":"upregulation of glucose mediated signaling pathway","type":"exact"},{"name":"upregulation of glucose mediated signalling","type":"exact"}],"termid":"GO:1902661"}


id: GO:0035879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactate across a plasma membrane.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transmembrane transport","termid":"GO:0035873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"plasma membrane lactate transport","synonyms":[{"name":"lactate plasma membrane transport","type":"exact"}],"termid":"GO:0035879"}


id: PBO:0085877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0085877"}


id: PBO:0046586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 28","termid":"PBO:0046586"}


id: GO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2B L-lysine (position 5) = CoA + histone H2B N6-acetyl-L-lysine (position 5).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B acetyltransferase activity","termid":"GO:0044013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0034212","GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"histone H2BK5 acetyltransferase activity","synonyms":[{"name":"histone acetylase activity (H2B-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2B-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2B-K5 specific)","type":"exact"}],"termid":"GO:0044014"}


id: GO:0023059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The positive regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive adaptation of signaling pathway","synonyms":[{"name":"positive adaptation of signalling pathway","type":"exact"}],"termid":"GO:0023059"}


id: PBO:0077760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 2","termid":"PBO:0077760"}


id: PBO:0061683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 133","termid":"PBO:0061683"}


id: GO:2000116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity","synonyms":[{"name":"regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2000116"}


id: PR:O14277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01525","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.08","secondary_identifiers":["UniProtKB:O14277"],"synonyms":[{"name":"Spom972h-RPS5","type":"exact"}],"termid":"PR:O14277"}


id: PBO:0056132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 1","termid":"PBO:0056132"}


id: GO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine uptake","termid":"GO:0051631"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acetylcholine uptake","synonyms":[{"name":"activation of acetylcholine uptake","type":"narrow"},{"name":"positive regulation of acetylcholine import","type":"exact"},{"name":"stimulation of acetylcholine uptake","type":"narrow"},{"name":"up regulation of acetylcholine uptake","type":"exact"},{"name":"up-regulation of acetylcholine uptake","type":"exact"},{"name":"upregulation of acetylcholine uptake","type":"exact"}],"termid":"GO:0051633"}


id: PBO:0068356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 1","termid":"PBO:0068356"}


id: PBO:0080244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 7 pseudogene","termid":"PBO:0080244"}


id: PBO:0069598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 875, pseudogene","termid":"PBO:0069598"}


id: PBO:0072945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 26A","termid":"PBO:0072945"}


id: PBO:0072987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem cell inhibitory RNA transcript","termid":"PBO:0072987"}


id: PBO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine","termid":"PBO:0000374"}


id: PBO:0044467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 2, pseudogene","termid":"PBO:0044467"}


id: PBO:0074649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 38B","termid":"PBO:0074649"}


id: PBO:0054069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1416","termid":"PBO:0054069"}


id: PBO:0063466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor like 2, pseudogene","termid":"PBO:0063466"}


id: PBO:0056277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAN2A1 divergent transcript","termid":"PBO:0056277"}


id: GO:1904326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of circadian sleep/wake cycle, wakefulness.","definition_xrefs":["GO_REF:0000058","PMID:10923657","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"},{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, wakefulness","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, wakefulness","type":"narrow"}],"termid":"GO:1904326"}


id: GO:0047218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumarate + UDP-D-glucose = 4-O-beta-D-glucosyl-4-hydroxycinnamate + UDP.","definition_xrefs":["EC:2.4.1.126","MetaCyc:2.4.1.126-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"hydroxycinnamate 4-beta-glucosyltransferase activity","secondary_identifiers":["RHEA:21636"],"synonyms":[{"name":"UDP-glucose-hydroxycinnamate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-4-hydroxycinnamate 4-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hydroxycinnamoyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxycinnamate glucosyltransferase activity","type":"related"}],"termid":"GO:0047218"}


id: PBO:0049711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase 1","termid":"PBO:0049711"}


id: GO:0102427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allocryptopine + NADPH + O2 + H+ = 6-hydroxy-allocryptopine + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"allocryptopine 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13828"],"termid":"GO:0102427"}


id: PBO:0084494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Mei5p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084494"}


id: PBO:0054172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1545","termid":"PBO:0054172"}


id: GO:0043259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha5, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-10 complex","synonyms":[{"name":"laminin-511 complex","type":"exact"}],"termid":"GO:0043259"}


id: PBO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase (predicted)","termid":"PBO:0000952"}


id: PBO:0027578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposon-derived_cDNA_recombination","termid":"PBO:0027578"}


id: GO:0036045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a malonyl group (CO-CH2-CO) to peptidyl-lysine to form N6-malonyl-L-lysine.","definition_xrefs":["GOC:sp","PMID:22076378","RESID:AA0568","PMID:21908771","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine malonylation (obsolete GO:0036045)","synonyms":[{"name":"lysine malonylation","type":"exact"},{"name":"peptidyl-lysine malonylation","type":"exact"}],"termid":"GO:0036045"}


id: GO:0019332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of nitrite (NO2) to nitrate (NO3), using oxygen (O2) as the electron acceptor. Nitrite oxidation is the final step in nitrification, the oxidation of ammonia to nitrate, and nitrite oxidoreductase (NOR) is the key enzyme complex that catalyzes the conversion of nitrite to nitrate in nitrite oxidizing species.","definition_xrefs":["MetaCyc:P282-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using nitrite as electron donor","synonyms":[{"name":"nitrite oxidation","type":"broad"}],"termid":"GO:0019332"}


id: PBO:0079096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 9-1","termid":"PBO:0079096"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: GO:0006663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether lipid biosynthetic process","termid":"GO:0008611"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"platelet activating factor biosynthetic process","synonyms":[{"name":"PAF biosynthesis","type":"exact"},{"name":"PAF biosynthetic process","type":"exact"},{"name":"platelet activating factor anabolism","type":"exact"},{"name":"platelet activating factor biosynthesis","type":"exact"},{"name":"platelet activating factor formation","type":"exact"},{"name":"platelet activating factor synthesis","type":"exact"}],"termid":"GO:0006663"}


id: PBO:0091364
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule plus-end tracking protein","termid":"PBO:0091364"}


id: PBO:0087074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L36B; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L36, no bacterial homolog; RPL36B has a paralog, RPL36A, that arose from the whole genome duplication","termid":"PBO:0087074"}


id: GO:0043856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to an anti-sigma factor and stopping, preventing or reducing the rate of its activity.","definition_xrefs":["GOC:jl","GOC:txnOH","PMID:15576799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"anti-sigma factor antagonist activity","synonyms":[{"name":"anti-anti-sigma factor activity","type":"exact"}],"termid":"GO:0043856"}


id: GO:0120338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the radial spoke 3 that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary axoneme.","definition_xrefs":["PMID:348711799","PMID:22754630","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke head","termid":"GO:0001535"},{"relation_name":"part_of","term_name":"radial spoke 3","termid":"GO:0120335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"radial spoke head 3","synonyms":[{"name":"radial spokehead 3","type":"exact"}],"termid":"GO:0120338"}


id: PBO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu43","termid":"PBO:0032735"}


id: PBO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030671"}


id: PBO:0087667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner ring of the nuclear pore complex (NPC); contributes to NPC assembly and tethering of DNA to the nuclear periphery; both Nup170p and NUP157p are similar to human Nup155p; NUP157 has a paralog, NUP170, that arose from the whole genome duplication","termid":"PBO:0087667"}


id: PBO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton regulator RNA","termid":"PBO:0044511"}


id: PR:Q10280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gaf1 gene.","definition_xrefs":["UniProtKB:Q10280","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor gaf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.01","synonyms":[{"name":"Gaf-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gaf1","type":"exact"}],"termid":"PR:Q10280"}


id: PR:Q9URX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.05c gene.","definition_xrefs":["UniProtKB:Q9URX1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC93-like protein C922.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.05c","synonyms":[{"name":"Spom972h-SPAC922.05c","type":"exact"}],"termid":"PR:Q9URX1"}


id: GO:0061746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate; this reaction requires the presence of single-stranded DNA, and it drives another reaction.","definition_xrefs":["PMID:26277776","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete single-stranded DNA-dependent GTPase activity (obsolete GO:0061746)","termid":"GO:0061746"}


id: PBO:0086821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR187C is not an essential gene","termid":"PBO:0086821"}


id: SO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether the sequence is the same direction as a feature (forward) or the opposite direction as a feature (reverse).","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direction_attribute","synonyms":[{"name":"direction attribute","type":"exact"}],"termid":"SO:0001029"}


id: PBO:0074878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58C","termid":"PBO:0074878"}


id: PBO:0064100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 2","termid":"PBO:0064100"}


id: GO:0032918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of spermidine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine acetylation","termid":"GO:0032918"}


id: GO:0102216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + a maltodextrin = AMP + hydrogenphosphate + a 6-phosphogluco-maltodextrin.","definition_xrefs":["EC:2.7.9.4","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"maltodextrin water dikinase","secondary_identifiers":["MetaCyc:RXN-12201"],"termid":"GO:0102216"}


id: GO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an S-alkyl-L-cysteine S-oxide = an alkyl sulfenate + 2-aminoacrylate.","definition_xrefs":["EC:4.4.1.4","MetaCyc:ALLIIN-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"alliin lyase activity","secondary_identifiers":["RHEA:20141"],"synonyms":[{"name":"L-cysteine sulfoxide lyase activity","type":"related"},{"name":"S-alkyl-L-cysteine S-oxide alkyl-sulfenate-lyase (2-aminoacrylate-forming)","type":"related"},{"name":"S-alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alliin alkyl-sulfenate-lyase activity","type":"related"},{"name":"alliinase activity","type":"related"},{"name":"cysteine sulfoxide lyase activity","type":"related"},{"name":"cysteine sulphoxide lyase activity","type":"related"}],"termid":"GO:0047654"}


id: PBO:0087261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase of the the RAM signaling network; Ndr/LATS family member; binds regulatory subunit Mob2p; involved in regulation of cellular morphogenesis, polarized growth, and septum destruction; phosphorylation by Cbk1p regulates localization and activity of Ace2p transcription factor and Ssd1p translational repressor; Cbk1p activity is regulated by both phosphorylation and specific localization; relocalizes to cytoplasm upon DNA replication stress","termid":"PBO:0087261"}


id: GO:0032263
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89934],"is_not":false,"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"Any process which produces guanosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032263","terms_by_termid":{"GO:0032263":null}}


id: PBO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transporter (predicted)","termid":"PBO:0001286"}


id: GO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur amino acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of sulfur amino acid metabolic process","synonyms":[{"name":"down regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"down-regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"downregulation of sulfur amino acid metabolic process","type":"exact"},{"name":"inhibition of sulfur amino acid metabolic process","type":"narrow"},{"name":"negative regulation of sulfur amino acid metabolism","type":"exact"}],"termid":"GO:0031336"}


id: PBO:0075087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 137","termid":"PBO:0075087"}


id: GO:0019211
data:
  {"annotated_genes":["SJAG_04968","SJAG_01270","SJAG_00883","SJAG_04638","SJAG_00078","SJAG_00095","SJAG_00369","SJAG_00526","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103397],"is_not":false,"summary":null,"term":"GO:0019211"},{"annotations":[89100,114064,111130,93872,102740,112054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[86168,94032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01270":null,"SJAG_03681":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"phosphatase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019211","terms_by_termid":{"GO:0008160":null,"GO:0019211":null,"GO:0072542":null}}


id: PATO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to detect or perceive external stimulation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity toward","synonyms":[{"name":"sensitivity","type":"exact"}],"termid":"PATO:0000085"}


id: FYPO:0005099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal poly(A) polymerase activity","termid":"FYPO:0005098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased poly(A) polymerase activity","synonyms":[{"name":"decreased PAP activity","type":"exact"},{"name":"decreased polynucleotide adenylyltransferase activity","type":"exact"},{"name":"reduced poly(A) polymerase activity","type":"exact"}],"termid":"FYPO:0005099"}


id: PBO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1","termid":"PBO:0047730"}


id: SO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript derived from the transcript of the telomere.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_transcript","synonyms":[{"name":"telomeric transcript","type":"exact"}],"termid":"SO:0001927"}


id: PBO:0086350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase sodium pump; involved in Na+ and Li+ efflux to allow salt tolerance","termid":"PBO:0086350"}


id: PBO:0081510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 416","termid":"PBO:0081510"}


id: PBO:0039769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 4","termid":"PBO:0039769"}


id: PR:Q10109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lem2 gene.","definition_xrefs":["UniProtKB:Q10109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.10","synonyms":[{"name":"LEM domain protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lem2","type":"exact"}],"termid":"PR:Q10109"}


id: PBO:0109977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109977"}


id: GO:1903893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","PMID:22013210","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of ATF6-mediated unfolded protein response","termid":"GO:1903891"},{"relation_name":"positively_regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"up regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"activation of ATF6 branch of UPR","type":"narrow"},{"name":"activation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of ATF6-alpha UPR branch","type":"narrow"},{"name":"activation of ATF6-beta UPR branch","type":"narrow"},{"name":"activation of ATF6-mediated unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by ATF6 stress sensor","type":"narrow"},{"name":"activation of activating transcription factor 6 signaling in unfolded protein response","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"narrow"},{"name":"positive regulation of ATF6 branch of UPR","type":"exact"},{"name":"positive regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"positive regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"positive regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"positive regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up regulation of ATF6 branch of UPR","type":"exact"},{"name":"up regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up-regulation of ATF6 branch of UPR","type":"exact"},{"name":"up-regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up-regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"upregulation of ATF6 branch of UPR","type":"exact"},{"name":"upregulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"upregulation of ATF6-beta UPR branch","type":"narrow"},{"name":"upregulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"upregulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"upregulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903893"}


id: PBO:0071845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 40","termid":"PBO:0071845"}


id: SO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TTCTTTGTTY, bound an HMG-box transcription factor such as S. pombe Ste11, and found in promoters of genes up-regulated early in meiosis.","definition_xrefs":["PMID:1657709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_box","synonyms":[{"name":"TR box","type":"exact"}],"termid":"SO:0001858"}


id: PBO:0064578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member A","termid":"PBO:0064578"}


id: PBO:0039250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 2 family member","termid":"PBO:0039250"}


id: PBO:0089647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein","termid":"PBO:0089647"}


id: GO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size.","definition_xrefs":["PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"macropinocytosis","secondary_identifiers":["GO:1902538"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"single-organism macropinocytosis","type":"related"}],"termid":"GO:0044351"}


id: GO:0140903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 26) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 26). This reaction is the addition of a methyl group to the arginine residue at position 26 of histone H3.","definition_xrefs":["PMID:17882261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0008276","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"histone H3R26 methyltransferase activity","synonyms":[{"name":"histone H3R26 arginine methyltransferase activity","type":"exact"},{"name":"histone methylase activity (H3-R26 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R26 specific)","type":"exact"},{"name":"histone-H3R26 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R26 specific)","type":"exact"}],"termid":"GO:0140903"}


id: GO:0009732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a hexose is received and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"detection of monosaccharide stimulus","termid":"GO:0034287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hexose stimulus","synonyms":[{"name":"perception of hexose stimulus","type":"related"}],"termid":"GO:0009732"}


id: PATO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loose","termid":"PATO:0001802"}


id: GO:0008470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanoyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = 3-methyl-(2E)-butenoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:7640268","RHEA:12276","PMID:25450250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acyl-CoA dehydrogenase activity","termid":"GO:0016937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isovaleryl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN0-2301","Reactome:R-HSA-70745","EC:1.3.8.4"],"synonyms":[{"name":"3-methylbutanoyl-CoA:(acceptor) oxidoreductase activity","type":"related"},{"name":"3-methylbutanoyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"isovaleroyl-coenzyme A dehydrogenase activity","type":"related"},{"name":"isovaleryl-coenzyme A dehydrogenase activity","type":"related"}],"termid":"GO:0008470"}


id: GO:0097046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulation of DNA replication by a mechanism that allows a DNA replication fork to progress beyond a termination site, which is a region containing fork pausing elements that influence the progression and merging of DNA replication forks.","definition_xrefs":["GOC:pr","GOC:bf","PMID:20797631","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication termination","termid":"GO:2000621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"replication fork progression beyond termination site","termid":"GO:0097046"}


id: GO:1903688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of border follicle cell migration.","definition_xrefs":["GOC:als","PMID:18394891","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell migration","termid":"GO:0010634"},{"relation_name":"is_a","term_name":"regulation of border follicle cell migration","termid":"GO:1903684"},{"relation_name":"positively_regulates","term_name":"border follicle cell migration","termid":"GO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of border follicle cell migration","synonyms":[{"name":"activation of border follicle cell migration","type":"narrow"}],"termid":"GO:1903688"}


id: PATO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elongated raised margin or border.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ridged","synonyms":[{"name":"ridge-like","type":"exact"}],"termid":"PATO:0002358"}


id: PBO:0062051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily V member 1","termid":"PBO:0062051"}


id: PBO:0030508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_topoisomerase_inhibitor","termid":"PBO:0030508"}


id: GO:0051347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transferase activity","synonyms":[{"name":"activation of transferase activity","type":"narrow"},{"name":"stimulation of transferase activity","type":"narrow"},{"name":"transferase activator","type":"exact"},{"name":"up regulation of transferase activity","type":"exact"},{"name":"up-regulation of transferase activity","type":"exact"},{"name":"upregulation of transferase activity","type":"exact"}],"termid":"GO:0051347"}


id: SO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_match","synonyms":[{"name":"nucleotide match","type":"exact"}],"termid":"SO:0000347"}


id: PBO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype,_adaptive_response_to_loss_of_mtDNA_(obsolete_FYPO:0000221)","termid":"PBO:0031213"}


id: SO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The simplest repeated component of a repeat region. A single repeat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_unit","secondary_identifiers":["http://www.insdc.org/files/feature_table.html"],"synonyms":[{"name":"repeat unit","type":"exact"}],"termid":"SO:0000726"}


id: GO:0045647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"negatively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte differentiation","synonyms":[{"name":"down regulation of erythrocyte differentiation","type":"exact"},{"name":"down-regulation of erythrocyte differentiation","type":"exact"},{"name":"downregulation of erythrocyte differentiation","type":"exact"},{"name":"inhibition of erythrocyte differentiation","type":"narrow"},{"name":"negative regulation of RBC differentiation","type":"exact"},{"name":"negative regulation of red blood cell differentiation","type":"exact"}],"termid":"GO:0045647"}


id: GO:1905145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetylcholine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:21238497","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to acetylcholine","termid":"GO:1905144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetylcholine","termid":"GO:1905145"}


id: PBO:0071959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6","termid":"PBO:0071959"}


id: PBO:0085477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable membrane protein; possible role in proton symport of glycerol; member of the MBOAT family of putative membrane-bound O-acyltransferases; homolog of the mammalian Hedgehog pathway modulator HHAT; GUP2 has a paralog, GUP1, that arose from the whole genome duplication","termid":"PBO:0085477"}


id: PBO:0057480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 599","termid":"PBO:0057480"}


id: GO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aldosterone into the circulatory system. Aldosterone is a pregnane-based steroid hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"aldosterone secretion","termid":"GO:0035932"}


id: PBO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endocytosis","termid":"PBO:0031776"}


id: PBO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-homologous end joining factor 1","termid":"PBO:0060989"}


id: PBO:0086542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR022C is not an essential gene","termid":"PBO:0086542"}


id: GO:0005923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes.","definition_xrefs":["ISBN:0815332181","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bicellular tight junction","secondary_identifiers":["Wikipedia:Tight_junction","NIF_Subcellular:sao1939999134"],"synonyms":[{"name":"zonula occludens","type":"exact"}],"termid":"GO:0005923"}


id: GO:0102220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dihydrogen + NAD + 2 an oxidized ferredoxin = NADH + 3 H+ + 2 a reduced ferredoxin.","definition_xrefs":["RHEA:30279","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrogenase activity (NAD+, ferredoxin)","secondary_identifiers":["EC:1.12.1.4","MetaCyc:RXN-12215"],"termid":"GO:0102220"}


id: GO:0072399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of cytokinesis checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:0072420"],"synonyms":[{"name":"cytokinesis checkpoint effector process","type":"exact"},{"name":"response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:0072399"}


id: GO:0061554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"ganglion morphogenesis","termid":"GO:0061552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion formation","synonyms":[{"name":"ganglia formation","type":"related"}],"termid":"GO:0061554"}


id: GO:0060573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of the identity of a cell in a field of cells that is being instructed as to how to differentiate. Once specification has taken place, that cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate specification involved in pattern specification","termid":"GO:0060573"}


id: FYPO:0002969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to mitotic spindle pole body","synonyms":[{"name":"increased protein localisation to mitotic spindle pole body","type":"exact"},{"name":"increased protein localization to mitotic SPB","type":"exact"},{"name":"increased protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0002969"}


id: GO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the stamen are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen morphogenesis","secondary_identifiers":["GO:0048426"],"termid":"GO:0048448"}


id: PBO:0056759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 14, N6-adenosine-methyltransferase subunit","termid":"PBO:0056759"}


id: GO:0016644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, disulfide, an iron-sulfur protein, NAD, NADP or oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors (obsolete GO:0016644)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"exact"}],"termid":"GO:0016644"}


id: PBO:0081339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 138","termid":"PBO:0081339"}


id: PBO:0088922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm1","termid":"PBO:0088922"}


id: PBO:0027618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0027618"}


id: PBO:0074305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX4 interacting protein","termid":"PBO:0074305"}


id: PBO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus_during_vegetative_growth","termid":"PBO:0036008"}


id: GO:0002654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"activation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"positive regulation of immune response-dependent tolerance induction","type":"exact"},{"name":"stimulation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"up regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"up-regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"upregulation of tolerance induction dependent upon immune response","type":"exact"}],"termid":"GO:0002654"}


id: PR:Q9P6R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit delta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13822:SF1","PRO:DNx","OMA:SCHPO03536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit delta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.04","secondary_identifiers":["UniProtKB:Q9P6R6"],"synonyms":[{"name":"F-ATPase delta subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5D","type":"exact"}],"termid":"PR:Q9P6R6"}


id: PBO:0087859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in maintenance of ion homeostasis; also involved in protection against DNA damage caused by bleomycin and other oxidants; contains a C-terminal leucine-rich repeat","termid":"PBO:0087859"}


id: GO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to DNA in a random coil configuration.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete random coil DNA binding (obsolete GO:0003695)","synonyms":[{"name":"random coil binding","type":"exact"}],"termid":"GO:0003695"}


id: PBO:0042943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD2 adjacent suppressive regulatory RNA","termid":"PBO:0042943"}


id: GO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"discadenine metabolic process","synonyms":[{"name":"discadenine metabolism","type":"exact"}],"termid":"GO:0034267"}


id: SO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A secondary structure variant that compensate for the change made by a previous variant.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_secondary_structure_variant","termid":"SO:0001596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory_transcript_secondary_structure_variant","synonyms":[{"name":"compensatory transcript secondary structure variant","type":"exact"}],"termid":"SO:0001597"}


id: PBO:0085381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter involved in multidrug resistance and resistance to singlet oxygen species","termid":"PBO:0085381"}


id: GO:0048542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lymph gland over time, from its formation to the mature structure. The lymph gland is one of the sites of hemocyte differentiation. It consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages.","definition_xrefs":["GOC:rc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph gland development","synonyms":[{"name":"haematopoietic organ development","type":"broad"},{"name":"haemopoietic organ development","type":"broad"},{"name":"hematopoietic organ development","type":"broad"},{"name":"hemopoietic organ development","type":"broad"}],"termid":"GO:0048542"}


id: GO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the ability of the host to mount a defense in response to its presence. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"},{"relation_name":"is_a","term_name":"response to host defenses","termid":"GO:0052200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host defense response","secondary_identifiers":["GO:0052255"],"synonyms":[{"name":"mitigation by symbiont of host defense response","type":"exact"},{"name":"modulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host defense response","type":"exact"},{"name":"pathogenesis","type":"related"},{"name":"perturbation by symbiont of host defense response","type":"exact"}],"termid":"GO:0052031"}


id: FYPO:0005983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of potassium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal potassium export","termid":"FYPO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased potassium export","synonyms":[{"name":"decreased cellular potassium export","type":"exact"},{"name":"decreased potassium export during mitotic cell cycle","type":"related"},{"name":"decreased potassium export during vegetative growth","type":"exact"},{"name":"decreased potassium export from cell","type":"exact"},{"name":"decreased potassium ion export","type":"exact"},{"name":"decreased potassium ion export across plasma membrane","type":"exact"},{"name":"reduced potassium export","type":"exact"}],"termid":"FYPO:0005983"}


id: GO:0102135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (22S)-22-hydroxycampest-4-en-3-one + NADPH + O2 = (22R,23R)-22,23-dihydroxy-campest-4-en-3-one + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(22S)-22-hydroxy-campest-4-en-3-one C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11530"],"termid":"GO:0102135"}


id: PBO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 2","termid":"PBO:0060014"}


id: SO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A light region between two darkly staining bands in a polytene chromosome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interband","synonyms":[{"name":"chromosome interband","type":"related"}],"termid":"SO:0000450"}


id: PBO:0011098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13","termid":"PBO:0011098"}


id: PR:O42872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component ski6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.10c","secondary_identifiers":["UniProtKB:O42872"],"synonyms":[{"name":"Spom972h-EXOSC4","type":"exact"},{"name":"ribosomal RNA-processing protein 41 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42872"}


id: GO:0097290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of alpha-ribazole, the benzimidazole nucleoside in adenosyl cobalamin (vitamin B12).","definition_xrefs":["MetaCyc:PWY-6269","GOC:yaf","MetaCyc:PWY-5508","UniPathway:UPA00061"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ribazole biosynthetic process (obsolete GO:0097290)","synonyms":[{"name":"alpha-ribazole anabolism","type":"exact"},{"name":"alpha-ribazole biosynthesis","type":"exact"},{"name":"alpha-ribazole formation","type":"exact"},{"name":"alpha-ribazole synthesis","type":"exact"}],"termid":"GO:0097290"}


id: PBO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCXR divergent transcript","termid":"PBO:0044666"}


id: PBO:0083968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucoamylase (glucan 1,4-alpha-glucosidase); allows yeast to degrade starch","termid":"PBO:0083968"}


id: PBO:0068664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 45, pseudogene","termid":"PBO:0068664"}


id: GO:0086064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels and contributes to the process of cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling","termid":"GO:0010644"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}


id: GO:0052422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism effects a change in the enzyme activity of its symbiont organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of symbiont catalytic activity","secondary_identifiers":["GO:0052428"],"synonyms":[{"name":"modulation by host of symbiont enzyme activity","type":"exact"},{"name":"modulation by host of symbiont molecular function","type":"broad"}],"termid":"GO:0052422"}


id: FYPO:0000212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to heat is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to heat","synonyms":[{"name":"abnormal cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0000212"}


id: GO:0051627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of epinephrine uptake","termid":"GO:0051626"},{"relation_name":"negatively_regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epinephrine uptake","synonyms":[{"name":"down regulation of epinephrine uptake","type":"exact"},{"name":"down-regulation of epinephrine uptake","type":"exact"},{"name":"downregulation of epinephrine uptake","type":"exact"},{"name":"negative regulation of adrenaline uptake","type":"exact"},{"name":"negative regulation of epinephrine import","type":"exact"}],"termid":"GO:0051627"}


id: GO:0031889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a urotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"urotensin receptor binding","synonyms":[{"name":"urotensin receptor ligand","type":"narrow"}],"termid":"GO:0031889"}


id: GO:0075187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specialized structure, consisted of stalked, thick-walled, lobed cells of vegetative epiphytic hyphae, is formed, to attach and penetrate the host surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyphopodium formation","synonyms":[{"name":"hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075187"}


id: PR:O94666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.08c","secondary_identifiers":["UniProtKB:O94666"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC158 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3A","type":"exact"}],"termid":"PR:O94666"}


id: PBO:0047958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(22)(q13)","termid":"PBO:0047958"}


id: PBO:0087021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 40S subunit protein S0A; required for maturation of 18S rRNA along with Rps0Bp; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal; homologous to human ribosomal protein SA and bacterial S2; RPS0A has a paralog, RPS0B, that arose from the whole genome duplication;","termid":"PBO:0087021"}


id: PBO:0027131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_early_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0027131"}


id: PBO:0065891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB38, member RAS oncogene family","termid":"PBO:0065891"}


id: PBO:0016619
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quant_gene_ex_copies_per_cell","termid":"PBO:0016619"}


id: PBO:0071800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 1A","termid":"PBO:0071800"}


id: GO:0034938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pryrole-2-carboxylate + NADH + O2 + H+ = 5-hydroxypyrrole-2-carboxylate + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyrrole-2-carboxylate monooxygenase activity","secondary_identifiers":["EC:1.14.14.-"],"termid":"GO:0034938"}


id: PBO:0070975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 13","termid":"PBO:0070975"}


id: GO:1903371
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903373"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endoplasmic reticulum tubular network organization.","definition_xrefs":["GOC:TermGenie","PMID:24891604","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum tubular network organization","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"regulation of ER tubular network organisation","type":"exact"},{"name":"regulation of ER tubular network organization","type":"exact"},{"name":"regulation of endoplasmic reticulum tubular network organisation","type":"exact"}],"termid":"GO:1903371","terms_by_termid":{"GO:1903373":null}}


id: GO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to modulating the rate or frequency of cell proliferation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of cell proliferation (obsolete GO:0044340)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of cell proliferation","type":"exact"}],"termid":"GO:0044340"}


id: GO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XIV) chains; type XIV collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"},{"relation_name":"is_a","term_name":"anchoring collagen complex","termid":"GO:0030934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XIV trimer","termid":"GO:0005596"}


id: FYPO:0003324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the spectrum of light absorption observed in whole cells or isolated mitochondria, and attributed to cytochromes present, differs from wild type.","definition_xrefs":["PMID:8668131","PMID:22349564","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"altered cytochrome absorption spectrum","synonyms":[{"name":"altered mitochondrial absorption spectrum","type":"related"}],"termid":"FYPO:0003324"}


id: GO:0061443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cushion cell.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"endocardial cushion development","termid":"GO:0003197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell differentiation","termid":"GO:0061443"}


id: PBO:0089064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase","termid":"PBO:0089064"}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: PBO:0084527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the FLO family of cell wall flocculation proteins; not expressed in most lab strains; overproduction induces flocculation that can be inhibited by mannose, sucrose, or glucose; overproduction also promotes haploid invasive growth and diploid filamentous growth","termid":"PBO:0084527"}


id: GO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NAD+ = 3-dehydroshikimate + NADH + H+.","definition_xrefs":["RHEA:17741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.282","KEGG_REACTION:R06847"],"synonyms":[{"name":"3-dehydroshikimate reductase activity","type":"related"},{"name":"3-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NAD(P)(+) 3-oxidoreductase activity","type":"related"},{"name":"shikimate:NAD(P)(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0052734"}


id: PBO:0070599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 66","termid":"PBO:0070599"}


id: GO:0045468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that ensures that the R8 cells are selected in a precise progressive pattern so that they are evenly spaced throughout the eye disc.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R8 cell spacing in compound eye","synonyms":[{"name":"R8 cell spacing in compound eye","type":"related"},{"name":"regulation of R8 spacing","type":"exact"}],"termid":"GO:0045468"}


id: PATO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000311 color hue value (obsolete PATO:0000311)","termid":"PATO:0000311"}


id: PBO:0052812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 78","termid":"PBO:0052812"}


id: PBO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 123","termid":"PBO:0042459"}


id: PBO:0058301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4675","termid":"PBO:0058301"}


id: PBO:0003713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INheritance of Peroxisomes","termid":"PBO:0003713"}


id: PBO:0079230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 7A","termid":"PBO:0079230"}


id: FYPO:0004072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during a cellular response to a pheromone. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to pheromone","synonyms":[{"name":"transcripts absent from cell during cellular response to pheromone","type":"exact"},{"name":"undetectable RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0004072"}


id: GO:0016823
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018773"},{"annotations":[102936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-carbon bond in a ketonic substance, a substance containing a keto (C=O) group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.7.1.-"],"termid":"GO:0016823","terms_by_termid":{"GO:0018773":null,"GO:0047621":null}}


id: GO:0036134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H2 = 12-hydroxyheptadecatrienoic acid (HHT) + malonaldehyde (MDA).","definition_xrefs":["PMID:11297515","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"12-hydroxyheptadecatrienoic acid synthase activity","secondary_identifiers":["RHEA:48644","Reactome:R-HSA-2161613"],"synonyms":[{"name":"prostaglandin H2 degradation activity","type":"related"}],"termid":"GO:0036134"}


id: GO:0007436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland morphogenesis","termid":"GO:0007436"}


id: PBO:0091189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 8","termid":"PBO:0091189"}


id: GO:0071572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 56 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 deacetylation (obsolete GO:0071572)","termid":"GO:0071572"}


id: FYPO:0000639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly begins later than normal.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of septum assembly","synonyms":[{"name":"delayed onset of division septum assembly","type":"exact"},{"name":"delayed onset of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"delayed onset of septation","type":"broad"},{"name":"delayed onset of septum assembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of septum assembly during vegetative growth","type":"exact"},{"name":"delayed onset of septum formation","type":"exact"},{"name":"delayed septum assembly","type":"exact"}],"termid":"FYPO:0000639"}


id: PBO:0079235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC9 divergent transcript","termid":"PBO:0079235"}


id: MOD:01962
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine.","definition_xrefs":["PubMed:19236052","RESID:AA0606","PubMed:12186869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetylamino-2,4,6-trideoxy-beta-D-glucopyranosyl)amino]-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (DATDGlc) asparagine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","type":"exact"},{"name":"N4-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-asparagine","type":"exact"},{"name":"N4-[N,N-diacetylbacillosaminyl]asparagine","type":"exact"},{"name":"N4-[N2,N4-diacetylbacillosaminyl]asparagine","type":"exact"}],"termid":"MOD:01962"}


id: PBO:0072824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component","termid":"PBO:0072824"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: PBO:0029344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_tRNA_absent_from_cell","termid":"PBO:0029344"}


id: GO:0016637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or related compound, a cytochrome, an iron-sulfur protein, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-CH group of donors, other acceptors (obsolete GO:0016637)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016637"}


id: PBO:0091488
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ErMes Regulator","termid":"PBO:0091488"}


id: GO:0003159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of an endothelium is generated and organized. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"endothelium development","termid":"GO:0003158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an endothelium","termid":"GO:0003159"}


id: GO:0050926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis","termid":"GO:0050926"}


id: GO:1990028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by an intermediate voltage-gated channel. An intermediate voltage-gated channel is a channel whose open state is dependent on intermediate voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:16382099","Wikipedia:Calcium_channel","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intermediate voltage-gated calcium channel activity","synonyms":[{"name":"R-type calcium channel","type":"related"}],"termid":"GO:1990028"}


id: PBO:0044367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, testis, pseudogene","termid":"PBO:0044367"}


id: FYPO:0000173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the DNA replication checkpoint in a mitotic cell cycle is abnormal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA integrity checkpoint","termid":"FYPO:0000643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic cell cycle DNA replication checkpoint","secondary_identifiers":["FYPO:0000823"],"synonyms":[{"name":"abnormal DNA replication checkpoint","type":"broad"},{"name":"abnormal mitotic cell cycle DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0000173"}


id: GO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl salicylate + H2O = salicylic acid + methanol + H+.","definition_xrefs":["MetaCyc:RXNQT-4366","PMID:18467465","PMID:18643994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"methyl salicylate esterase activity","synonyms":[{"name":"MESA esterase activity","type":"exact"},{"name":"methyl SA esterase activity","type":"exact"},{"name":"methylsalicylate esterase activity","type":"exact"},{"name":"salicylic acid methyl ester esterase activity","type":"exact"}],"termid":"GO:0080031"}


id: PBO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta Nda3","termid":"PBO:0004744"}


id: GO:0034058
data:
  {"annotated_genes":["SJAG_03347","SJAG_00380","SJAG_00204","SJAG_02315","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86382,90490,95663,97273,113041],"is_not":false,"summary":null,"term":"GO:0034058"}]},"cv_name":"biological_process","definition":"The homotypic fusion of endocytic vesicles to form or add to an early endosome.","definition_xrefs":["PMID:11964142","PMID:9422733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00380":null,"SJAG_02315":null,"SJAG_03347":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endosomal vesicle fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endosome vesicle fusion","type":"exact"}],"termid":"GO:0034058","terms_by_termid":{"GO:0034058":null}}


id: GO:0030400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A recruiting factor or adaptor molecule associated with the proteasome that activates degradation of specific proteasomal substrates and links them to the degradation machinery; it is not involved in ubiquitination; does not possess proteolytic activity.","definition_xrefs":["PMID:11500370"],"gene_count":0,"genotype_count":0,"name":"obsolete protease substrate recruitment factor activity (obsolete GO:0030400)","synonyms":[{"name":"protease substrate recruitment factor activity","type":"exact"}],"termid":"GO:0030400"}


id: PBO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene synthase Erg9 (predicted)","termid":"PBO:0003389"}


id: MOD:00229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to form alpha-1-microglobulin-Ig alpha complex chromophore.","definition_xrefs":["PubMed:7506257","PubMed:11877257","PubMed:11058759","RESID:AA0224","PubMed:7535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1-microglobulin-Ig alpha complex chromophore","synonyms":[{"name":"BINDING Multimeric 3-hydroxykynurenine chromophore (covalent)","type":"exact"},{"name":"alpha-1-microglobulin-Ig alpha complex chromophore","type":"exact"}],"termid":"MOD:00229"}


id: PBO:0088470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf15","termid":"PBO:0088470"}


id: PBO:0074787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 8","termid":"PBO:0074787"}


id: PBO:0054417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1813","termid":"PBO:0054417"}


id: GO:0032358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized pyrimidine residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized DNA binding","termid":"GO:0032356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"oxidized pyrimidine DNA binding","synonyms":[{"name":"oxidised pyrimidine DNA binding","type":"exact"},{"name":"oxidized pyrimidine base DNA binding","type":"exact"},{"name":"oxidized pyrimidine nucleobase DNA binding","type":"exact"}],"termid":"GO:0032358"}


id: PBO:0026859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_in_anaphase-promoting_complex","termid":"PBO:0026859"}


id: GO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an enzyme.","definition_xrefs":["GOC:ebc","GOC:jl","GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalytic activity","secondary_identifiers":["GO:0048554"],"synonyms":[{"name":"activation of enzyme activity","type":"narrow"},{"name":"activation of metalloenzyme activity","type":"narrow"},{"name":"positive regulation of enzyme activity","type":"exact"},{"name":"positive regulation of metalloenzyme activity","type":"narrow"},{"name":"stimulation of enzyme activity","type":"narrow"},{"name":"stimulation of metalloenzyme activity","type":"narrow"},{"name":"up regulation of enzyme activity","type":"exact"},{"name":"up regulation of metalloenzyme activity","type":"narrow"},{"name":"up-regulation of enzyme activity","type":"exact"},{"name":"up-regulation of metalloenzyme activity","type":"narrow"},{"name":"upregulation of enzyme activity","type":"exact"},{"name":"upregulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043085"}


id: PBO:0047367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 20","termid":"PBO:0047367"}


id: GO:0099093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion (Ca2+) is transported out of the mitochondrial matrix, and into the cytosol.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion transmembrane transport","termid":"GO:0006851"},{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"calcium export from the mitochondrion","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion","type":"exact"},{"name":"mitochondrial calcium ion export","type":"broad"},{"name":"mitochondrial calcium release","type":"exact"}],"termid":"GO:0099093"}


id: PBO:0074591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 5C","termid":"PBO:0074591"}


id: PBO:0040149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH1L antisense RNA 1","termid":"PBO:0040149"}


id: PBO:0085930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial protein that physically interacts with Tim23p; null mutant displays reduced respiratory growth","termid":"PBO:0085930"}


id: GO:1901427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a propan-1-ol stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to propan-1-ol","termid":"GO:1901427"}


id: PBO:0069915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1207, pseudogene","termid":"PBO:0069915"}


id: PR:Q8TFI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- loc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFI0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1751.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.04","synonyms":[{"name":"Spom972h-loc1","type":"exact"}],"termid":"PR:Q8TFI0"}


id: PBO:0058015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3941","termid":"PBO:0058015"}


id: PBO:0055618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3057","termid":"PBO:0055618"}


id: PBO:0059841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 1","termid":"PBO:0059841"}


id: PBO:0068395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 214","termid":"PBO:0068395"}


id: PBO:0110200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p23 homolog, Hsp90 co-chaperone Wos2","termid":"PBO:0110200"}


id: PBO:0040909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 13","termid":"PBO:0040909"}


id: GO:0010069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of the zygote in a plane perpendicular to the long axis of the embryo sac to produce a larger basal cell near the micropyle and a small terminal cell close to what was the central cell and is now the developing endosperm. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb","ISBN:0865427429","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cytokinesis","termid":"GO:0000281"},{"relation_name":"is_a","term_name":"zygote asymmetric cell division","termid":"GO:0010070"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"zygote asymmetric cytokinesis in embryo sac","termid":"GO:0010069"}


id: GO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte activation","termid":"GO:0042117"}


id: PBO:0038388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_region","termid":"PBO:0038388"}


id: PBO:0061093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK6 homeobox 2","termid":"PBO:0061093"}


id: PBO:0030393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell_(obsolete_FYPO:0001224)","termid":"PBO:0030393"}


id: GO:0018131
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxazole or thiazole, five-membered heterocyclic ring structures containing an oxygen and a sulfur, respectively, in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole or thiazole metabolic process","termid":"GO:0046484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxazole or thiazole biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxazole or thiazole anabolism","type":"exact"},{"name":"oxazole or thiazole biosynthesis","type":"exact"},{"name":"oxazole or thiazole formation","type":"exact"},{"name":"oxazole or thiazole synthesis","type":"exact"}],"termid":"GO:0018131","terms_by_termid":{"GO:0052837":null}}


id: PBO:0017457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in","termid":"PBO:0017457"}


id: GO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of central tolerance induction","termid":"GO:0002646"}


id: PATO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mobility","termid":"PATO:0002283"}


id: PBO:0013443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft1 (predicted)","termid":"PBO:0013443"}


id: PBO:0048536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 2","termid":"PBO:0048536"}


id: PBO:0061001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein pseudogene 1","termid":"PBO:0061001"}


id: GO:0071006
data:
  {"annotated_genes":["SJAG_04783","SJAG_04898","SJAG_01315","SJAG_01504","SJAG_04117"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91568,93011,96840,101923,113345],"is_not":false,"summary":null,"term":"GO:0071006"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.","definition_xrefs":["PMID:19239890","GOC:ab","GOC:krc","GOC:mah","ISBN:0879695897","ISBN:0879697393","PMID:18322460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01315":null,"SJAG_01504":null,"SJAG_04117":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U2-type catalytic step 1 spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG catalytic step 1 spliceosome","type":"narrow"},{"name":"U2-type activated spliceosome","type":"exact"},{"name":"major catalytic step 1 spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex B2","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071006","terms_by_termid":{"GO:0071006":null}}


id: PBO:0063477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 5","termid":"PBO:0063477"}


id: PBO:0042415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26 pseudogene 1","termid":"PBO:0042415"}


id: PBO:0057285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 505","termid":"PBO:0057285"}


id: GO:2000562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD4-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell proliferation","termid":"GO:0046642"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000515"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell proliferation","termid":"GO:2000561"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, alpha-beta T cell proliferation","termid":"GO:0035739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD4-positive, alpha-beta T cell proliferation","termid":"GO:2000562"}


id: PBO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 115","termid":"PBO:0044828"}


id: GO:0036433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans, octa-cis-undecaprenol + ATP = di-trans,octa-cis-undecaprenyl phosphate + ADP + H+.","definition_xrefs":["RHEA:28122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenol kinase activity","termid":"GO:0009038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"di-trans, poly-cis-undecaprenol kinase activity","secondary_identifiers":["KEGG_REACTION:R05626","MetaCyc:UNDECAPRENOL-KINASE-RXN"],"synonyms":[{"name":"ditrans,polycis-undecaprenol kinase activity","type":"related"}],"termid":"GO:0036433"}


id: PBO:0031041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_DHA_in_growth_medium","termid":"PBO:0031041"}


id: PR:P37818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arginase-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Car1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP26C9.02c","secondary_identifiers":["UniProtKB:P37818"],"synonyms":[{"name":"SPBP26C9.02c","type":"related"},{"name":"Spom972h-ARG2","type":"exact"}],"termid":"PR:P37818"}


id: GO:0050708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein secretion","termid":"GO:0050708"}


id: GO:0070596
data:
  {"annotated_genes":["SJAG_04236","SJAG_00424","SJAG_04184","SJAG_01028","SJAG_04666","SJAG_00610","SJAG_03057","SJAG_02916","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100330,110538,85352,113908,105244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[91109,85643,88605,99006],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-alpha-glucan anabolism","type":"exact"},{"name":"1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"1,3-alpha-glucan formation","type":"exact"},{"name":"1,3-alpha-glucan synthesis","type":"exact"},{"name":"alpha-1,3 glucan anabolism","type":"exact"},{"name":"alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"alpha-1,3 glucan formation","type":"exact"},{"name":"alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070596","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0068990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 234, pseudogene","termid":"PBO:0068990"}


id: GO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen transcytosis carried out by M cells in the mucosal-associated lymphoid tissue (MALT). Transcytosis is the process of the directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side. M cells are specialized epithelia cells with a microfold structure that are adept at moving antigens from the gut lumen to antigen presenting cells in the MALT.","definition_xrefs":["GOC:jal","PMID:12843411","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"},{"relation_name":"part_of","term_name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","termid":"GO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"antigen transcytosis by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen transcytosis by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in mucosal-associated lymphoid tissue","type":"exact"}],"termid":"GO:0002412"}


id: PBO:0039552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 46","termid":"PBO:0039552"}


id: GO:0075069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an infection cushion of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont infection cushion to host","synonyms":[{"name":"adhesion of symbiont infection cushion to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075069"}


id: PBO:0012598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alditol NADP+ 1-oxidoreductase activity (predicted)","termid":"PBO:0012598"}


id: PBO:0066040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 9","termid":"PBO:0066040"}


id: FYPO:0005363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle kinetochore microtubule depolymerization, occurs to a lesser extent than normal during mitotic chromosome recapture.","definition_xrefs":["PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization","termid":"FYPO:0004650"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000641","FYPO:0000631","FYPO:0000337","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased kinetochore microtubule catastrophe during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased kinetochore microtubule depolymerisation during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased kinetochore microtubule shrinkage during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during kinetochore retrieval","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to SPB","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during sister kinetochore recapture","type":"exact"},{"name":"reduced kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0005363"}


id: FYPO:0004225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of nucleosome binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abnormal nucleosome binding","termid":"FYPO:0004225"}


id: FYPO:0007317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation in the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased cytoplasmic translation","synonyms":[{"name":"decreased cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translation during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translation","type":"exact"}],"termid":"FYPO:0007317"}


id: PBO:0058794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7515","termid":"PBO:0058794"}


id: SO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 25S_rRNA, which functions as a component of the large subunit of the ribosome in some eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_25S_gene","synonyms":[{"name":"25S rRNA gene","type":"exact"},{"name":"25S_rRNA_gene","type":"exact"}],"termid":"SO:0002242"}


id: GO:0048860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a glioblast into daughter cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glioblast division","termid":"GO:0048860"}


id: GO:0043380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of memory T cell differentiation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"memory T cell differentiation","termid":"GO:0043379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of memory T cell differentiation","synonyms":[{"name":"regulation of memory T cell development","type":"related"},{"name":"regulation of memory T lymphocyte differentiation","type":"exact"},{"name":"regulation of memory T-cell differentiation","type":"exact"},{"name":"regulation of memory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043380"}


id: PBO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 antisense RNA 1","termid":"PBO:0051691"}


id: GO:0072438
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA replication checkpoint","type":"exact"}],"termid":"GO:0072438","terms_by_termid":{"GO:0072441":null}}


id: GO:0099037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endosome membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of presynaptic endosome membrane (obsolete GO:0099037)","termid":"GO:0099037"}


id: PBO:0075196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 8","termid":"PBO:0075196"}


id: FYPO:0004658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has two nuclei and more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"binucleate multiseptate vegetative cell","termid":"FYPO:0001223"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"inviable binucleate multiseptate vegetative cell","synonyms":[{"name":"inviable binucleate multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable binucleate multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; binucleate multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004658"}


id: GO:0044151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of host on or near symbiont surface (obsolete GO:0044151)","synonyms":[{"name":"growth of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0044151"}


id: SO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The insertion and deletion of uridine (U) residues, usually within coding regions of mRNA transcripts of cryptogenes in the mitochondrial genome of kinetoplastid protozoa.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000597 transcript_edited_by_U_insertion/deletion (obsolete SO:0000597)","termid":"SO:0000597"}


id: PBO:0031310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle","termid":"PBO:0031310"}


id: PBO:0005749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAX inhibitor family protein Bxi1","termid":"PBO:0005749"}


id: PBO:0027717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0027717"}


id: GO:0018607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-indanone + NADPH + 1/2 O2 = NADP+ + 3,4-dihydrocoumarin.","definition_xrefs":["UM-BBD_reactionID:r0417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-indanone monooxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018607"}


id: GO:1900825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during action potential","termid":"GO:0098902"},{"relation_name":"regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"}


id: PBO:0043383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clavesin 1","termid":"PBO:0043383"}


id: PBO:0034363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_severity_of_condition","termid":"PBO:0034363"}


id: PBO:0086516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; not conserved in closely related Saccharomyces species; multicopy suppressor of glucose transport defects, likely due to the presence of an HXT4 regulatory element in the region","termid":"PBO:0086516"}


id: PATO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light red","termid":"PATO:0001262"}


id: PBO:0061872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte expressed protein","termid":"PBO:0061872"}


id: PBO:0043302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 19A","termid":"PBO:0043302"}


id: GO:0071216
data:
  {"annotated_genes":["SJAG_01837","SJAG_01805","SJAG_04332","SJAG_00082","SJAG_03048","SJAG_04183","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112829,98539,107366,89986,86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[100315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90717,98552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to biotic stress","type":"narrow"}],"termid":"GO:0071216","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: FYPO:0003891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PomBase:mah","PMID:11104907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal intragenic meiotic recombination","synonyms":[{"name":"normal meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0003891"}


id: GO:0010573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of vascular endothelial growth factor production due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"vascular endothelial growth factor production","synonyms":[{"name":"VEGF production","type":"exact"}],"termid":"GO:0010573"}


id: GO:0005586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(III) chains; type III collagen triple helices associate to form fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type III trimer","termid":"GO:0005586"}


id: PBO:0043954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 2","termid":"PBO:0043954"}


id: GO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A growth factor that binds selectively and non-covalently to glial cell-derived neurotrophic factor receptors.","definition_xrefs":["GOC:vw","PMID:11476867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor binding","synonyms":[{"name":"glial cell line-derived neurotrophic factor receptor binding","type":"related"},{"name":"glial cell line-derived neurotrophic factor receptor ligand","type":"narrow"}],"termid":"GO:0030116"}


id: PR:Q9USH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy1 gene.","definition_xrefs":["UniProtKB:Q9USH7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein psy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.03c","synonyms":[{"name":"Spom972h-psy1","type":"exact"}],"termid":"PR:Q9USH7"}


id: PBO:0017894
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dis1 Suppressing protein Kinase","termid":"PBO:0017894"}


id: PBO:0049430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 7","termid":"PBO:0049430"}


id: MOD:00504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine.","definition_xrefs":["PubMed:11955008","PubMed:11955007","RESID:AA0059#var","OMSSA:79","PubMed:1386601","PubMed:7543369","PubMed:1326520","PubMed:6436247","Unimod:135#G"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-(cis,cis-delta 5,delta 8)-tetradecadienoylglycine","synonyms":[{"name":"(cis,cis-delta 5, delta 8)-tetradecadienoyl","type":"related"},{"name":"Myristoyl+Delta:H(-4)","type":"related"},{"name":"N-(C14:2 aliphatic acyl)glycine","type":"exact"},{"name":"myristoylation-4H (two double bonds)","type":"exact"},{"name":"ntermpepmyristoyl4hg","type":"exact"}],"termid":"MOD:00504"}


