# terms

id: PBO:0001366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase (inferred_from_context)","termid":"PBO:0001366"}


id: PBO:0062989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin coregulated like","termid":"PBO:0062989"}


id: PBO:0042310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 4","termid":"PBO:0042310"}


id: GO:0051938
data:
  {"annotated_genes":["SJAG_00626","SJAG_03256","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901481"},{"annotations":[99997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[92732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate, the L-enantiomer of the anion of 2-aminopentanedioic acid, into a cell or organelle.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-glutamate import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate uptake","type":"exact"}],"termid":"GO:0051938","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null,"GO:1901481":null}}


id: PBO:0026884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_nitrogen_starvation","termid":"PBO:0026884"}


id: PBO:0068870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 110, pseudogene","termid":"PBO:0068870"}


id: PBO:0059721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 29","termid":"PBO:0059721"}


id: GO:1901947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["PMID:22027823","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolism","type":"exact"}],"termid":"GO:1901947"}


id: GO:1904071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic active zone. The presynaptic active zone is a specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["PMID:10769383","GOC:TermGenie","GOC:pr","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone assembly","synonyms":[{"name":"pre-synaptic active zone assembly","type":"exact"},{"name":"pre-synaptic active zone component assembly","type":"narrow"},{"name":"pre-synaptic active zone component formation","type":"narrow"},{"name":"pre-synaptic active zone formation","type":"exact"},{"name":"presynaptic active zone formation","type":"exact"}],"termid":"GO:1904071"}


id: GO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to retinoic acid","synonyms":[{"name":"response to vitamin A acid","type":"exact"}],"termid":"GO:0032526"}


id: PBO:0063834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA dioxygenase domain containing 1","termid":"PBO:0063834"}


id: GO:1903225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23154389","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"negatively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodermal cell differentiation","synonyms":[{"name":"down regulation of endoderm cell differentiation","type":"exact"},{"name":"down regulation of endodermal cell differentiation","type":"exact"},{"name":"down-regulation of endoderm cell differentiation","type":"exact"},{"name":"down-regulation of endodermal cell differentiation","type":"exact"},{"name":"downregulation of endoderm cell differentiation","type":"exact"},{"name":"downregulation of endodermal cell differentiation","type":"exact"},{"name":"inhibition of endoderm cell differentiation","type":"narrow"},{"name":"inhibition of endodermal cell differentiation","type":"narrow"},{"name":"negative regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903225"}


id: PBO:0082517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0082517"}


id: PBO:0088214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2H2-type","termid":"PBO:0088214"}


id: GO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075705)","synonyms":[{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral penetration via endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075705"}


id: PR:Q10307
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6C3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.02c","secondary_identifiers":["UniProtKB:Q10307"],"synonyms":[{"name":"Spom972h-CHCHD10","type":"exact"}],"termid":"PR:Q10307"}


id: GO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during metaphase. Typically, sister chromatids are held together at their centromeres and chromosomes are covered with a large number of molecules, including ribonucleoproteins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metaphase chromosome (obsolete GO:0005710)","synonyms":[{"name":"metaphase chromosome","type":"exact"}],"termid":"GO:0005710"}


id: GO:0160060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which the drive for sleep increases sleep propensity with prolonged wakefulness.","definition_xrefs":["PMID:30509635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sleep homeostasis","termid":"GO:0160060"}


id: PBO:0072734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 4","termid":"PBO:0072734"}


id: PBO:0002864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor homolog Aif1 (predicted)","termid":"PBO:0002864"}


id: PBO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor 2C2 associated protein","termid":"PBO:0061438"}


id: PBO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor serine/threonine protein phosphatase Ppa1","termid":"PBO:0001636"}


id: PBO:0073978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 3","termid":"PBO:0073978"}


id: PBO:0080627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 74","termid":"PBO:0080627"}


id: PBO:0042189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D1","termid":"PBO:0042189"}


id: FYPO:0001685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to purvalanol A","synonyms":[{"name":"increased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"increased transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001685"}


id: PBO:0047152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member B, pseudogene","termid":"PBO:0047152"}


id: PBO:0050265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 43","termid":"PBO:0050265"}


id: PR:Q10209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4H3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.01","synonyms":[{"name":"Spom972h-SPAC4H3.01","type":"exact"}],"termid":"PR:Q10209"}


id: GO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal.","definition_xrefs":["GOC:mah","GOC:BHF","CL:0000115","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell apoptotic process","synonyms":[{"name":"apoptosis of endothelial cells","type":"exact"},{"name":"endothelial cell apoptosis","type":"narrow"},{"name":"endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of endothelial cells","type":"exact"},{"name":"programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:0072577"}


id: GO:0050833
data:
  {"annotated_genes":["SJAG_04593","SJAG_01924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90568,110319],"is_not":false,"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyruvate, 2-oxopropanoate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372342"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0050833","terms_by_termid":{"GO:0050833":null}}


id: GO:0072290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric nephron tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in metanephros development","termid":"GO:0035788"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"}


id: FYPO:0006041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic metaphase chromosome recapture is decreased.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000337","FYPO:0000641","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased rate of chromosome recapture during mitosis","type":"exact"},{"name":"decreased rate of chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased rate of kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased rate of metaphase chromosome recapture during mitotic cell cycle","type":"related"},{"name":"decreased rate of mitotic kinetochore retrieval","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased rate of mitotic sister kinetochore recapture","type":"exact"},{"name":"increased time to mitotic metaphase chromosome recapture","type":"related"},{"name":"reduced rate of mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0006041"}


id: GO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deletion of B cells by apoptotic process occurring as part of central tolerance induction and B cell selection.","definition_xrefs":["GOC:add","GOC:jal","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deletion","termid":"GO:0002516"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"part_of","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell deletion","synonyms":[{"name":"central B lymphocyte deletion","type":"exact"},{"name":"central B-cell deletion","type":"exact"},{"name":"central B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002342"}


id: GO:0007236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ssk1 protein (obsolete GO:0007236)","synonyms":[{"name":"activation of Ssk1 protein","type":"exact"}],"termid":"GO:0007236"}


id: GO:0006940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"regulates","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle contraction","termid":"GO:0006940"}


id: PBO:0028226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_cellular_response_to_heat","termid":"PBO:0028226"}


id: PBO:0063335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA antisense RNA 1","termid":"PBO:0063335"}


id: PBO:0054458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1855","termid":"PBO:0054458"}


id: GO:0015757
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The process in which galactose is transported across a lipid bilayer, from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"galactose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose transport","type":"related"}],"termid":"GO:0015757","terms_by_termid":{"GO:0140425":null}}


id: PBO:0046906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member G","termid":"PBO:0046906"}


id: PBO:0083098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase; DNA recombination/repair translocase, supercoils DNA, promotes DNA strand opening; stimulates strand exchange by modifying dsDNA topology; involved in recombinational repair of DNA double-strand breaks (DSBs) during mitosis, meiosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; phosphorylated in response to DNA damage","termid":"PBO:0083098"}


id: PBO:0089828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC1 DNA repair endonuclease non-catalytic subunit Swi10","termid":"PBO:0089828"}


id: GO:0043752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RTP + adenosylcobinamide = adenosylcobinamide phosphate + RDP (where RTP is either ATP or GTP).","definition_xrefs":["EC:2.7.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"adenosylcobinamide kinase activity","secondary_identifiers":["MetaCyc:2.7.1.156-RXN"],"synonyms":[{"name":"AdoCbi kinase/AdoCbi-phosphate guanylyltransferase","type":"broad"},{"name":"CobU","type":"related"},{"name":"RTP:adenosylcobinamide phosphotransferase activity","type":"exact"},{"name":"adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase","type":"broad"}],"termid":"GO:0043752"}


id: PBO:0071271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 5","termid":"PBO:0071271"}


id: GO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.","definition_xrefs":["EC:2.4.2.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"NAD+ ADP-ribosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9729279","Reactome:R-HSA-8948800","Reactome:R-HSA-2187325","Reactome:R-HSA-5688276","Reactome:R-HSA-3640858","Reactome:R-HSA-8938073","Reactome:R-HSA-5687653","Reactome:R-HSA-9686061","MetaCyc:NAD+-ADP-RIBOSYLTRANSFERASE-RXN","Reactome:R-HSA-5651723"],"synonyms":[{"name":"ADP-ribosyltransferase (polymerizing) activity","type":"related"},{"name":"NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"related"},{"name":"poly(ADP-ribose) synthase activity","type":"related"},{"name":"poly(ADP-ribose) synthetase activity","type":"related"},{"name":"poly(ADP-ribose)polymerase activity","type":"related"},{"name":"poly(adenosine diphosphate ribose) polymerase activity","type":"related"}],"termid":"GO:0003950"}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:atr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"atrazine metabolic process","termid":"GO:0018873"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["MetaCyc:P141-PWY"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: GO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"positively_regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of alpha-beta T cell differentiation","synonyms":[{"name":"activation of alpha-beta T cell differentiation","type":"narrow"},{"name":"positive regulation of alpha-beta T cell development","type":"related"},{"name":"positive regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"positive regulation of alpha-beta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of alpha-beta T cell differentiation","type":"narrow"},{"name":"up regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"up-regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"upregulation of alpha-beta T cell differentiation","type":"exact"}],"termid":"GO:0046638"}


id: PBO:0057848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3160-1","termid":"PBO:0057848"}


id: PBO:0047592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen like 1","termid":"PBO:0047592"}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007128"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Pachytene","Wikipedia:Meiosis#Pachytene"],"termid":"GO:0000239"}


id: GO:1903768
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of taste receptor activity.","definition_xrefs":["GOC:TermGenie","PMID:16720576","GO_REF:0000088","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"taste receptor complex","termid":"GO:1903768"}


id: PBO:0071691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 23","termid":"PBO:0071691"}


id: PBO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (predicted)","termid":"PBO:0003118"}


id: PR:Q9P6K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv14 gene.","definition_xrefs":["UniProtKB:Q9P6K6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-derived vesicles protein erv14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30C2.05","synonyms":[{"name":"Spom972h-erv14","type":"exact"}],"termid":"PR:Q9P6K6"}


id: PBO:0028583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_vegetative_growth","termid":"PBO:0028583"}


id: FYPO:0000843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,4-dithiothreitol (DTT). Cells stop growing (and may die) at a concentration of dithiothreitol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to dithiothreitol","synonyms":[{"name":"hypersensitive to dithiothreitol","type":"exact"},{"name":"sensitive to 1,4-dithiothreitol","type":"exact"},{"name":"sensitive to DTT","type":"exact"},{"name":"sensitive to dithiothreitol during mitotic cell cycle","type":"related"},{"name":"sensitive to dithiothreitol during vegetative growth","type":"exact"}],"termid":"FYPO:0000843"}


id: PBO:0028431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_nucleus_during_mating","termid":"PBO:0028431"}


id: PBO:0061607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1","termid":"PBO:0061607"}


id: PBO:0079072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 6-1","termid":"PBO:0079072"}


id: PBO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 3","termid":"PBO:0071697"}


id: PBO:0051952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 1","termid":"PBO:0051952"}


id: PBO:0084455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase; involved in adding the 4th and 5th mannose residues of O-linked glycans","termid":"PBO:0084455"}


id: PR:000030002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"Spom-CHEK2","type":"exact"}],"termid":"PR:000030002"}


id: GO:0032940
data:
  {"annotated_genes":["SJAG_02368","SJAG_00430","SJAG_03754","SJAG_03718","SJAG_00332","SJAG_04509","SJAG_03499","SJAG_00280","SJAG_01448","SJAG_02529","SJAG_00826","SJAG_03536","SJAG_04966","SJAG_02366","SJAG_04343","SJAG_03763","SJAG_01697","SJAG_01925","SJAG_03915","SJAG_01324","SJAG_00661","SJAG_03357","SJAG_02004","SJAG_01772","SJAG_02166","SJAG_04960","SJAG_03938","SJAG_04044","SJAG_07004","SJAG_02012","SJAG_02320","SJAG_02753","SJAG_00355","SJAG_02587","SJAG_03864","SJAG_02518","SJAG_02572","SJAG_03005","SJAG_01563","SJAG_01048","SJAG_04058","SJAG_01722","SJAG_04517","SJAG_03246"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87469,91203,97000,88449,84218,98818,101220,110101,98076,86942,109076,111787,112372,113264,113668,84974,114645,93625,114939,84621,87329,87653,88193,90043,90417,91165,104370,103547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006887"},{"annotations":[96327],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[84129,90027,94574],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[85922,114318,114543,114942,88510,113633,96406,86774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[110315,84846,86944,113844,95702,98078,110035,114943],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The controlled release of a substance by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01324":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02529":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"secretion by cell","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Secretion"],"synonyms":[{"name":"cellular secretion","type":"exact"}],"termid":"GO:0032940","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: MOD:01342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00530. Remap to MOD:00530.","definition_xrefs":["Unimod:162","PubMed:12148805"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01342 selenium substitution for sulfur - site M (obsolete MOD:01342)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01342"}


id: GO:2001265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of C-C chemokine binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine binding","termid":"GO:2001263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of C-C chemokine binding","termid":"GO:2001265"}


id: PBO:0055071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2488","termid":"PBO:0055071"}


id: PBO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-thialysine","termid":"PBO:0030143"}


id: PBO:0086457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; may regulate purine nucleotide homeostasis as overexpression in an AMD1 strain grown in adenine results in greatly reduced GDP and GTP intracellular levels; not an essential gene; YJL070C has a paralog, YBR284W, that arose from the whole genome duplication","termid":"PBO:0086457"}


id: GO:0043761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-digeranylgeranylglycerol + L-serine = archaetidylserine + CMP.","definition_xrefs":["PMID:12562787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"archaetidylserine synthase activity","secondary_identifiers":["EC:2.7.8.38"],"synonyms":[{"name":"CDP-2,3-di-O-geranylgeranyl-sn-glycerol inositol 1-archaetidyltransferase activity","type":"exact"},{"name":"CDP-2,3-di-O-geranylgeranyl-sn-glycerol:l-serine O-archaetidyltransferase activity","type":"exact"}],"termid":"GO:0043761"}


id: GO:0160076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical inflammasome complex assembly.","definition_xrefs":["PMID:26375259","PMID:22002608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"negatively_regulates","term_name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of non-canonical inflammasome complex assembly","termid":"GO:0160076"}


id: PBO:0109131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 4","termid":"PBO:0109131"}


id: PBO:0005873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine, mitochondrial","termid":"PBO:0005873"}


id: PBO:0109840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_allele_systematic_id","termid":"PBO:0109840"}


id: GO:0090320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"chylomicron remnant clearance","termid":"GO:0034382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chylomicron remnant clearance","termid":"GO:0090320"}


id: PBO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with PIN3 cooperatively inhibits the nucleation of actin filaments; overexpression blocks receptor-mediated endocytosis; protein increases in abundance and forms nuclear foci in response to DNA replication stress; LSB1 has a paralog, PIN3, that arose from the whole genome duplication","termid":"PBO:0085002"}


id: PBO:0067926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 228","termid":"PBO:0067926"}


id: FYPO:0000042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires sulfite in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for sulfite","synonyms":[{"name":"growth auxotrophic for sulfite during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for sulfite during vegetative growth","type":"exact"},{"name":"growth auxotrophic for sulphite","type":"exact"},{"name":"sulfite auxotrophy","type":"exact"}],"termid":"FYPO:0000042"}


id: PBO:0091732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase Ymr31/Kgd4","termid":"PBO:0091732"}


id: GO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + oxamate = oxalurate + phosphate.","definition_xrefs":["EC:2.1.3.5","RHEA:22984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"oxamate carbamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02937","MetaCyc:OXAMATE-CARBAMOYLTRANSFERASE-RXN"],"synonyms":[{"name":"carbamoyl-phosphate:oxamate carbamoyltransferase activity","type":"related"},{"name":"oxamic transcarbamylase activity","type":"related"}],"termid":"GO:0050205"}


id: GO:0032691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"negative regulation of interleukin-1 production","termid":"GO:0032692"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050713","GO:0050724"],"synonyms":[{"name":"down regulation of interleukin-1 beta production","type":"exact"},{"name":"down-regulation of interleukin-1 beta production","type":"exact"},{"name":"downregulation of interleukin-1 beta production","type":"exact"},{"name":"inhibition of interleukin-1 beta production","type":"narrow"},{"name":"negative regulation of IL-1 beta production","type":"exact"},{"name":"negative regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032691"}


id: PBO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3","termid":"PBO:0004728"}


id: PBO:0067607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 775, pseudogene","termid":"PBO:0067607"}


id: PBO:0028513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_domain","termid":"PBO:0028513"}


id: PBO:0054415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1811","termid":"PBO:0054415"}


id: GO:0021928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to basket cells. A cerebellar basket cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["PMID:15157725","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basket cell precursor proliferation","termid":"GO:0021928"}


id: PR:P14965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ura4 gene.","definition_xrefs":["UniProtKB:P14965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.05c","synonyms":[{"name":"OMP decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OMPDCase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OMPdecase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ura4","type":"exact"},{"name":"UMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine 5'-monophosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14965"}


id: PBO:0041276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 3","termid":"PBO:0041276"}


id: PBO:0057826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3145","termid":"PBO:0057826"}


id: PBO:0082843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle protein; involved in vesicle formation and incorporation of specific secretory cargo; required for the delivery of bud-site selection protein Axl2p and Nha1p antiporter to cell surface; related to Drosophila cornichon; ERV14 has a paralog, ERV15, that arose from the whole genome duplication","termid":"PBO:0082843"}


id: GO:1904192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["PMID:24498161","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte apoptotic process","synonyms":[{"name":"regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904192"}


id: PBO:0071946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 23","termid":"PBO:0071946"}


id: FYPO:0006275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pyknosis, the form of chromatin condensation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["GO:0030263","PMID:18653539","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased pyknosis during stationary phase","synonyms":[{"name":"increased apoptotic chromosome condensation during stationary phase","type":"exact"}],"termid":"FYPO:0006275"}


id: PR:O13671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10997:SF8","OMA:SCHPO02811","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin-alpha re-exporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.05","secondary_identifiers":["UniProtKB:O13671"],"synonyms":[{"name":"Spom972h-CSE1L","type":"exact"},{"name":"cellular apoptosis susceptibility protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13671"}


id: PBO:0083166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF MAK3/YPR051W","termid":"PBO:0083166"}


id: GO:1901980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:23449501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inward rectifier potassium channel activity","termid":"GO:1901979"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inward rectifier potassium channel activity","synonyms":[{"name":"activation of Kir channel activity","type":"exact"},{"name":"activation of inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of Kir channel activity","type":"exact"},{"name":"up regulation of Kir channel activity","type":"exact"},{"name":"up regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of Kir channel activity","type":"exact"},{"name":"up-regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of Kir channel activity","type":"exact"},{"name":"upregulation of inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1901980"}


id: GO:0034076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = cucurbitadienol.","definition_xrefs":["PMID:18033581","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cucurbitadienol synthase activity","termid":"GO:0034076"}


id: PBO:0074612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 15B-1","termid":"PBO:0074612"}


id: GO:0120139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity.","definition_xrefs":["PMID:17097615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity","termid":"GO:0120138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity","termid":"GO:0120139"}


id: PBO:0046647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 28","termid":"PBO:0046647"}


id: GO:0033490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate lathosterol.","definition_xrefs":["MetaCyc:PWY66-341","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cholesterol biosynthetic process via lathosterol","synonyms":[{"name":"cholesterol anabolism via lathosterol","type":"exact"},{"name":"cholesterol biosynthesis via lathosterol","type":"exact"},{"name":"cholesterol formation via lathosterol","type":"exact"},{"name":"cholesterol synthesis via lathosterol","type":"exact"}],"termid":"GO:0033490"}


id: PBO:0077766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 2","termid":"PBO:0077766"}


id: GO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannan, a group of polysaccharides containing a backbone composed of a polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannan metabolic process","synonyms":[{"name":"mannan metabolism","type":"exact"}],"termid":"GO:0010412"}


id: PBO:0067726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 24","termid":"PBO:0067726"}


id: PBO:0074544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SND1 intronic transcript 1","termid":"PBO:0074544"}


id: GO:2000734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000733"},{"relation_name":"negatively_regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"negative regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000734"}


id: GO:0103016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H+ + a tRNA uridine34 + a [TusE sulfur carrier protein]-S-sulfanylcysteine = AMP + diphosphoric acid + a tRNA 2-thiouridine34 + a [TusE sulfur carrier protein]-L-cysteine.","definition_xrefs":["PMID:12949933","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA-specific 2-thiouridylase activity","secondary_identifiers":["MetaCyc:RXN0-2023"],"termid":"GO:0103016"}


id: GO:0097563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["ISBN:9780124260207","GOC:giardia","PMID:5961344","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left middle basal body pair","termid":"GO:0097563"}


id: GO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of angiotensin-converting enzyme, thereby preventing the synthesis of angiotensin II from its precursor, angiotensin I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete angiotensin-converting enzyme inhibitor activity (obsolete GO:0042031)","synonyms":[{"name":"ACE inhibitor","type":"exact"},{"name":"angiotensin-converting enzyme inhibitor activity","type":"exact"},{"name":"peptidyl dipeptidase A inhibitor","type":"exact"}],"termid":"GO:0042031"}


id: PBO:0054146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1513","termid":"PBO:0054146"}


id: PBO:0046375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTR1 pseudogene 1","termid":"PBO:0046375"}


id: PBO:0090936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase Ptp4/Dgk1","termid":"PBO:0090936"}


id: PBO:0109598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transvar_coordinates","termid":"PBO:0109598"}


id: PBO:0058508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5698","termid":"PBO:0058508"}


id: PBO:0044929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase eta","termid":"PBO:0044929"}


id: SO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where recombination has occurred for the purpose of generating a diversity in the immune system.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature_of_rearranged_gene","termid":"SO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_feature","synonyms":[{"name":"vertebrate immune system gene recombination feature","type":"exact"}],"termid":"SO:0000301"}


id: PBO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 5, pseudogene","termid":"PBO:0061432"}


id: MOD:01135
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex-HexNAc","termid":"MOD:01135"}


id: PBO:0055098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2516","termid":"PBO:0055098"}


id: PBO:0085020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinate phosphoribosyltransferase; acts in the salvage pathway of NAD+ biosynthesis; required for silencing at rDNA and telomeres and has a role in silencing at mating-type loci; localized to the nucleus","termid":"PBO:0085020"}


id: GO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate biosynthetic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate biosynthesis","type":"exact"},{"name":"dihydrosphingosine-1-phosphate biosynthetic process","type":"exact"},{"name":"sphinganine-1-phosphate anabolism","type":"exact"},{"name":"sphinganine-1-phosphate biosynthesis","type":"exact"},{"name":"sphinganine-1-phosphate formation","type":"exact"},{"name":"sphinganine-1-phosphate synthesis","type":"exact"}],"termid":"GO:0006669"}


id: PBO:0040367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 4","termid":"PBO:0040367"}


id: GO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the use of stored sperm from the first-mating male is inhibited by the seminal fluid of subsequently mating males.","definition_xrefs":["PMID:10440373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm incapacitation","termid":"GO:0046694"}


id: FYPO:0003557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of antisense RNA measured in a cell is higher than normal. Antisense RNA is transcribed from the coding, rather than the template, strand of DNA.","definition_xrefs":["PomBase:mah","SO:0000644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered antisense RNA level during vegetative growth","termid":"FYPO:0005857"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased antisense RNA level","synonyms":[{"name":"increased antisense RNA accumulation","type":"related"},{"name":"increased antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased antisense RNA level during vegetative growth","type":"exact"},{"name":"increased antisense RNA transcript level","type":"exact"},{"name":"increased level of antisense transcripts","type":"exact"}],"termid":"FYPO:0003557"}


id: PBO:0109012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 13, pseudogene","termid":"PBO:0109012"}


id: PBO:0065874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 2","termid":"PBO:0065874"}


id: PBO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU pseudogene 2","termid":"PBO:0047324"}


id: GO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylceramide metabolic process","termid":"GO:0006678"},{"relation_name":"is_a","term_name":"glycosylceramide biosynthetic process","termid":"GO:0046476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucosylceramide biosynthetic process","synonyms":[{"name":"glucosylceramide anabolism","type":"exact"},{"name":"glucosylceramide biosynthesis","type":"exact"},{"name":"glucosylceramide formation","type":"exact"},{"name":"glucosylceramide synthesis","type":"exact"}],"termid":"GO:0006679"}


id: FYPO:0003567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the mitotic spindle pole body localization into the nuclear envelope is abnormal.","definition_xrefs":["PMID:19942852","GO:0140480","PomBase:mah","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body localization","termid":"FYPO:0000534"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope","secondary_identifiers":["FYPO:0006595"],"synonyms":[{"name":"abnormal establishment of spindle pole body localization to nuclear envelope","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormal mitotic spindle pole body localization to nuclear envelope","type":"related"},{"name":"abnormal spindle pole body insertion into nuclear envelope during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003567"}


id: PBO:0060056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 3","termid":"PBO:0060056"}


id: PBO:0067575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 732, pseudogene","termid":"PBO:0067575"}


id: GO:0072339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactam biosynthetic process","synonyms":[{"name":"cellular lactam anabolism","type":"exact"},{"name":"cellular lactam biosynthesis","type":"exact"},{"name":"cellular lactam biosynthetic process","type":"exact"},{"name":"cellular lactam formation","type":"exact"},{"name":"cellular lactam synthesis","type":"exact"}],"termid":"GO:0072339"}


id: FYPO:0006905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["GO:0031568","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell size control checkpoint","termid":"FYPO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0000257","FYPO:0000631","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint","synonyms":[{"name":"normal G1 cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006905"}


id: PATO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's once or in or a few unpredictable instances.","definition_xrefs":["PATO:MAH","WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic","termid":"PATO:0000428"}


id: GO:0018644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene + H+ + NADH + O2 = 2-hydroxytoluene + H2O + NAD+.","definition_xrefs":["RHEA:20349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"toluene 2-monooxygenase activity","secondary_identifiers":["EC:1.14.13.243","MetaCyc:TOLUENE-2-MONOOXYGENASE-RXN","UM-BBD_enzymeID:e0222"],"termid":"GO:0018644"}


id: PBO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition","termid":"PBO:0031802"}


id: GO:0007207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by acetylcholine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dph","GOC:mah","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by G-protein coupled acetylcholine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by muscarinic acetylcholine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by muscarinic acetylcholine receptor signalling pathway","type":"exact"},{"name":"muscarinic acetylcholine receptor, phospholipase C activating pathway","type":"related"},{"name":"muscarinic receptor signaling pathway via activation of PLC","type":"exact"},{"name":"phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway","type":"exact"}],"termid":"GO:0007207"}


id: GO:1990986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a DNA recombinase complex into its constituent strand exchange proteins (recombinases).","definition_xrefs":["PMID:19540122","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex disassembly","termid":"GO:0032986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA recombinase disassembly","synonyms":[{"name":"Rad51 nucleoprotein filament disassembly","type":"related"}],"termid":"GO:1990986"}


id: GO:1990979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of copper ions passing through the blood-brain barrier.","definition_xrefs":["PMID:24614235"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transport across blood-brain barrier (obsolete GO:1990979)","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:1990979"}


id: MOD:00326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-pyrrolysine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:15314242","PubMed:11435424","RESID:AA0321#LYS","PubMed:12029132","Unimod:435#K","PubMed:16096277","PubMed:12029131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"L-pyrrolysine residue","termid":"MOD:01187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine (Lys)","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl(Lys)","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:00326"}


id: PR:Q09824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rep2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator protein rep2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.11c","synonyms":[{"name":"Spom972h-rep2","type":"exact"}],"termid":"PR:Q09824"}


id: PBO:0039604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member D","termid":"PBO:0039604"}


id: GO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an endothelial cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell development","termid":"GO:0001885"}


id: PBO:0068907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 150, pseudogene","termid":"PBO:0068907"}


id: PATO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000379 relative frequency value (obsolete PATO:0000379)","termid":"PATO:0000379"}


id: PBO:0074050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A30 antisense RNA 1","termid":"PBO:0074050"}


id: PBO:0087738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; this complex is involved in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance","termid":"PBO:0087738"}


id: GO:0042784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal execution of the activation of complement in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:7745740","PMID:20194595","PMID:21191012","PMID:25830295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation","secondary_identifiers":["GO:0051811","VZ:811"],"synonyms":[{"name":"active evasion of host immune response via regulation of host complement system","type":"related"},{"name":"active evasion of immune response of other organism via regulation of complement system of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of host complement system","type":"exact"},{"name":"active immune evasion via regulation of host complement system","type":"exact"},{"name":"evasion of host immune response via modulation of host complement system","type":"exact"},{"name":"evasion of host immune response via regulation of host complement system","type":"exact"},{"name":"suppression of complement activation by another organism","type":"broad"}],"termid":"GO:0042784"}


id: PBO:0087114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; proposed to act in protein synthesis, nuclear pore complex biogenesis and maintenance as well as protein folding and prion maintenance; ; has similarity to the mammalian BAG-1 protein","termid":"PBO:0087114"}


id: PR:Q10585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase delaying protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.03","synonyms":[{"name":"Spom972h-spd1","type":"exact"},{"name":"protein p14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10585"}


id: PBO:0111802
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase family","termid":"PBO:0111802"}


id: PBO:0011439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+] (predicted)","termid":"PBO:0011439"}


id: GO:1903754
data:
  {"annotated_genes":["SJAG_00140","SJAG_00113","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91374,93740,99903],"is_not":false,"summary":null,"term":"GO:1903754"}]},"cv_name":"cellular_component","definition":"The plus-end of a cortical microtubule.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule plus-end","termid":"GO:1904511"},{"relation_name":"part_of","term_name":"cortical microtubule","termid":"GO:0055028"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"cortical microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cortical microtubule plus end","type":"exact"}],"termid":"GO:1903754","terms_by_termid":{"GO:1903754":null}}


id: PBO:0065031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 6","termid":"PBO:0065031"}


id: PBO:0079168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein","termid":"PBO:0079168"}


id: GO:0030157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pancreatic juice secretion","termid":"GO:0030157"}


id: PBO:0049675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase","termid":"PBO:0049675"}


id: PBO:0075445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastin","termid":"PBO:0075445"}


id: GO:0097557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the right posteriolateral basal body and extends cytoplasmically toward the cell posterior, marking the right anterior boundary of the lateral shield and the right lateral region of the funis before exiting at the right lateral region of the cell body.","definition_xrefs":["ISBN:9780124260207","GOC:giardia","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right posteriolateral flagellum","synonyms":[{"name":"right posteriolateral cilium","type":"exact"},{"name":"right posterolateral cilium","type":"exact"},{"name":"right posterolateral flagellum","type":"exact"}],"termid":"GO:0097557"}


id: GO:0070931
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a Golgi-associated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"Golgi-associated vesicle lumen","termid":"GO:0070931"}


id: GO:0031962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear mineralocorticoid receptor.","definition_xrefs":["GOC:mah","PMID:12511169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear mineralocorticoid receptor binding","synonyms":[{"name":"mineralocorticoid receptor binding","type":"broad"}],"termid":"GO:0031962"}


id: GO:0071613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme B due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"granzyme B production","termid":"GO:0071613"}


id: GO:0019428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin biosynthetic process","secondary_identifiers":["MetaCyc:URSIN-PWY"],"synonyms":[{"name":"allantoin anabolism","type":"exact"},{"name":"allantoin biosynthesis","type":"exact"},{"name":"allantoin formation","type":"exact"},{"name":"allantoin synthesis","type":"exact"}],"termid":"GO:0019428"}


id: PBO:0030319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oleoyl-CoA_ligase_activity","termid":"PBO:0030319"}


id: GO:1990295
data:
  {"annotated_genes":["SJAG_01297","SJAG_02695","SJAG_00930","SJAG_02045","SJAG_02336","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97581,99703,100053,104418],"is_not":false,"summary":null,"term":"GO:1990295"},{"annotations":[97580,93148],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905759"},{"annotations":[87560],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"A cytoskeletal part that consists of an array of microtubules and associated molecules that forms at the end of anaphase, and in which microtubules are nucleated from an equatorial microtubule organizing center.","definition_xrefs":["PMID:9601091","PMID:11792817","PMID:17072892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01297":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"post-anaphase microtubule array","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAA","type":"exact"},{"name":"post-anaphase array","type":"exact"}],"termid":"GO:1990295","terms_by_termid":{"GO:1905759":null,"GO:1905760":null,"GO:1990295":null}}


id: GO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps3, Hps5, and Hps6 proteins; the mouse complex contains ru2 and ru.","definition_xrefs":["PMID:15031569","PMID:12548288","PMID:14718540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BLOC-2 complex","termid":"GO:0031084"}


id: GO:1901789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzoyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"benzoyl-CoA metabolic process","termid":"GO:1901787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"benzoyl-CoA biosynthetic process","synonyms":[{"name":"benzoyl-CoA anabolism","type":"exact"},{"name":"benzoyl-CoA biosynthesis","type":"exact"},{"name":"benzoyl-CoA formation","type":"exact"},{"name":"benzoyl-CoA synthesis","type":"exact"}],"termid":"GO:1901789"}


id: GO:0021711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature unipolar brush cell in the cerebellum. Differentiation includes the processes involved in commitment of a neuroblast to a unipolar brush cell fate. A unipolar brush cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar unipolar brush cell differentiation","termid":"GO:0021711"}


id: PBO:0065493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 2","termid":"PBO:0065493"}


id: RO:0008507
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_on","termid":"RO:0008507"}


id: GO:1904090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of peptidase inhibitor activity.","definition_xrefs":["GOC:TermGenie","PMID:20860624","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"peptidase inhibitor complex","synonyms":[{"name":"Cathepsin-B - cystatin-A complex","type":"narrow"}],"termid":"GO:1904090"}


id: GO:0097273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine.","definition_xrefs":["GOC:yaf","PMID:12695560"],"gene_count":0,"genotype_count":0,"name":"obsolete creatinine homeostasis (obsolete GO:0097273)","termid":"GO:0097273"}


id: GO:0046342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate.","definition_xrefs":["PMID:6147353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-diacylglycerol metabolic process","termid":"GO:0046341"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol catabolic process","synonyms":[{"name":"CDP-diacylglycerol breakdown","type":"exact"},{"name":"CDP-diacylglycerol catabolism","type":"exact"},{"name":"CDP-diacylglycerol degradation","type":"exact"}],"termid":"GO:0046342"}


id: FYPO:0000058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer mitochondrial nucleoids than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondrial nucleoids present in decreased numbers","synonyms":[{"name":"decreased number of mitochondrial nucleoids","type":"exact"},{"name":"fewer mitochondrial nucleoids present","type":"exact"},{"name":"mitochondrial nucleoid decreased number","type":"exact"},{"name":"mitochondrial nucleoids present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondrial nucleoids present in decreased numbers during vegetative growth","type":"exact"},{"name":"mitochondrial nucleoids present in reduced numbers","type":"exact"}],"termid":"FYPO:0000058"}


id: PBO:0053210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LGALS8 antisense RNA 1","termid":"PBO:0053210"}


id: PBO:0085225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Para hydroxybenzoate polyprenyl transferase; catalyzes the second step in ubiquinone (coenzyme Q) biosynthesis; human COQ2, mutations in which are implicated in an increased risk of mutiple-system atrophy, can complement a yeast coq2 null mutant","termid":"PBO:0085225"}


id: PBO:0062617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily W member 1","termid":"PBO:0062617"}


id: GO:0140398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: versicolorin B + NADPH + O2 = versicolorin A + NADP+ + 2 H2O. Uses heme-thiolate as a co-factor. Involved in the synthesis of aflatoxins in the fungus Aspergillus parasiticus.","definition_xrefs":["PMID:15006741","PMID:8368837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"versicolorin B desaturase activity","secondary_identifiers":["RHEA:35743","MetaCyc:RXN-9495","KEGG_REACTION:R10479"],"termid":"GO:0140398"}


id: GO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the surface configuration of a cell during the vegetative growth phase. The vegetative growth phase is the growth phase during which single celled organisms reproduce by budding or other asexual methods.","definition_xrefs":["GOC:go_curators","GOC:vw","GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape during vegetative growth phase (obsolete GO:0000903)","synonyms":[{"name":"cell morphogenesis during vegetative growth phase","type":"related"},{"name":"cellular morphogenesis during vegetative growth","type":"related"},{"name":"regulation of cell morphogenesis during vegetative growth phase","type":"related"}],"termid":"GO:0000903"}


id: PBO:0045186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B5 pseudogene 1","termid":"PBO:0045186"}


id: PBO:0039786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12B","termid":"PBO:0039786"}


id: RO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has developmental contribution from","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_developmentally_contribute_to","termid":"RO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_contributes_to","termid":"RO:0002255"}


id: PBO:0068816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 54, pseudogene","termid":"PBO:0068816"}


id: PBO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transporter (predicted)","termid":"PBO:0002078"}


id: PBO:0063376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 2, ethanolamine","termid":"PBO:0063376"}


id: GO:0010702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histolysis (obsolete GO:0010702)","termid":"GO:0010702"}


id: PBO:0063486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 3","termid":"PBO:0063486"}


id: PBO:0059052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX network transcriptional repressor","termid":"PBO:0059052"}


id: GO:0046286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0098754","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"flavonoid phytoalexin catabolic process","synonyms":[{"name":"flavonoid phytoalexin breakdown","type":"exact"},{"name":"flavonoid phytoalexin catabolism","type":"exact"},{"name":"flavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046286"}


id: PBO:0070592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 58","termid":"PBO:0070592"}


id: PBO:0076026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK24 antisense RNA 1","termid":"PBO:0076026"}


id: PBO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 14","termid":"PBO:0070784"}


id: PBO:0012590
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human NF1","termid":"PBO:0012590"}


id: PBO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 20","termid":"PBO:0050318"}


id: PBO:0049787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (gene/pseudogene)","termid":"PBO:0049787"}


id: PBO:0057456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 575","termid":"PBO:0057456"}


id: GO:0033173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a member of the NFAT protein family as a consequence of NFAT dephosphorylation by Ca(2+)-activated calcineurin. The cascade begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin dephosphorylates multiple phosphoserine residues on NFAT, resulting in the translocation of NFAT to the nucleus. The cascade ends with regulation of transcription by NFAT. The calcineurin-NFAT cascade lies downstream of many cell surface receptors, including G protein-coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs) that signal to mobilize calcium ions (Ca2+).","definition_xrefs":["GOC:mah","PMID:15928679","GOC:lm","PMID:12975316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcineurin-NFAT signaling cascade","synonyms":[{"name":"calcineurin-NFAT signaling pathway","type":"related"},{"name":"calcineurin-NFAT signalling pathway","type":"related"}],"termid":"GO:0033173"}


id: PBO:0077629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 1","termid":"PBO:0077629"}


id: MOD:01387
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-methyl-L-threonine.","definition_xrefs":["RESID:AA0464","PubMed:7328054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated threonine","termid":"MOD:01803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"O-methyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-methoxybutanoic acid","type":"exact"},{"name":"MOD_RES O-methylthreonine","type":"exact"},{"name":"O-methyl threonine","type":"exact"},{"name":"O-methyl-L-threonine","type":"exact"},{"name":"OMeThr","type":"exact"},{"name":"threonine methyl ether","type":"exact"}],"termid":"MOD:01387"}


id: PBO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SRT1 and RER2","termid":"PBO:0016545"}


id: GO:0100044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular hyperosmotic salinity response.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter (obsolete GO:0100044)","termid":"GO:0100044"}


id: FYPO:0008075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is increased.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0008075"}


id: PBO:0070069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 26, pseudogene","termid":"PBO:0070069"}


id: GO:0031385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the end of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of termination of mating projection growth","termid":"GO:0031385"}


id: PBO:0028958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_UDP-galactose_transmembrane_transport","termid":"PBO:0028958"}


id: GO:0018501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of a di- or tetrachlorinated dienol to the corresponding catechol.","definition_xrefs":["UM-BBD_enzymeID:e0411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-chlorobenzene dihydrodiol dehydrogenase activity","termid":"GO:0018501"}


id: PBO:0054869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2283","termid":"PBO:0054869"}


id: PBO:0038717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 12","termid":"PBO:0038717"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: PBO:0075259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 12","termid":"PBO:0075259"}


id: PBO:0090440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa49","termid":"PBO:0090440"}


id: GO:0071118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the extracellular matrix protein NOV.","definition_xrefs":["PMID:12902636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-NOV complex","synonyms":[{"name":"ITGAV-ITGB3-FN-1-NOV complex","type":"narrow"}],"termid":"GO:0071118"}


id: GO:0015963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"diadenosine triphosphate biosynthetic process","synonyms":[{"name":"diadenosine triphosphate anabolism","type":"exact"},{"name":"diadenosine triphosphate biosynthesis","type":"exact"},{"name":"diadenosine triphosphate formation","type":"exact"},{"name":"diadenosine triphosphate synthesis","type":"exact"}],"termid":"GO:0015963"}


id: GO:0008129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity for peptide bonds, with preference for a residue bearing a large hydrophobic side chain at the P2 position. Does not accept Val at P1'.","definition_xrefs":["EC:3.4.22.14"],"gene_count":0,"genotype_count":0,"name":"obsolete actinidain activity (obsolete GO:0008129)","synonyms":[{"name":"actinidain activity","type":"exact"},{"name":"actinidia anionic protease activity","type":"narrow"},{"name":"actinidin activity","type":"related"},{"name":"proteinase A2 of actinidia chinensis","type":"related"}],"termid":"GO:0008129"}


id: PBO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein sap61","termid":"PBO:0003365"}


id: PBO:0078271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 7-1","termid":"PBO:0078271"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: GO:0033696
data:
  {"annotated_genes":["SJAG_03635","SJAG_01610","SJAG_03664","SJAG_03945","SJAG_02701","SJAG_03118","SJAG_02401","SJAG_02165","SJAG_03997","SJAG_04213","SJAG_00335","SJAG_01601","SJAG_00302","SJAG_04755","SJAG_03543","SJAG_01046"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84382,86950,90259,92331,95066,95285,95309,98166,98167,98168,99215,99387,108776,108777,108778,109224,111403,113253,113869],"is_not":false,"summary":null,"term":"GO:0033696"}]},"cv_name":"biological_process","definition":"A process that forms a boundary that limits the spreading of heterochromatin along a chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin organization","termid":"GO:0070828"},{"relation_name":"part_of","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_01046":null,"SJAG_01601":null,"SJAG_01610":null,"SJAG_02165":null,"SJAG_02401":null,"SJAG_02701":null,"SJAG_03118":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03945":null,"SJAG_03997":null,"SJAG_04213":null,"SJAG_04755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"heterochromatin boundary formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031454"],"synonyms":[{"name":"maintenance of heterochromatin boundaries","type":"related"},{"name":"negative regulation of extent of heterochromatin assembly","type":"related"},{"name":"negative regulation of extent of heterochromatin formation","type":"related"},{"name":"negative regulation of heterochromatin spreading","type":"related"},{"name":"regulation of extent of heterochromatin assembly","type":"related"},{"name":"regulation of extent of heterochromatin formation","type":"exact"},{"name":"regulation of heterochromatin spreading","type":"related"}],"termid":"GO:0033696","terms_by_termid":{"GO:0033696":null}}


id: PBO:0112405
data:
  {"annotated_genes":["SJAG_MIT09","SJAG_MIT15","SJAG_MIT37"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56009,56017,56041],"is_not":false,"summary":null,"term":"PBO:0112405"}]},"cv_name":"EC numbers","gene_count":3,"genes_by_uniquename":{"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"is_obsolete":false,"name":"3.6.1.34","termid":"PBO:0112405","terms_by_termid":{"PBO:0112405":null}}


id: PBO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein blinkin, Spc7","termid":"PBO:0015706"}


id: PBO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-cytochrome p450 reductase","termid":"PBO:0004092"}


id: GO:0047894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin = adenosine 3',5'-diphosphate + H+ + quercetin 3-sulfate.","definition_xrefs":["EC:2.8.2.25","RHEA:13453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"flavonol 3-sulfotransferase activity","secondary_identifiers":["MetaCyc:FLAVONOL-3-SULFOTRANSFERASE-RXN","KEGG_REACTION:R02159"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin 3-sulfotransferase activity","type":"exact"},{"name":"flavonol 3-sulphotransferase activity","type":"exact"}],"termid":"GO:0047894"}


id: GO:0032546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"deoxyribonucleoside binding","termid":"GO:0032546"}


id: FYPO:0005123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from late meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PomBase:mah","PMID:17927811","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of late meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of late meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of late meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of late meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005123"}


id: PBO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rrp3 (predicted)","termid":"PBO:0001630"}


id: GO:0051258
data:
  {"annotated_genes":["SJAG_02761","SJAG_02245","SJAG_03540","SJAG_02624","SJAG_00521","SJAG_00279","SJAG_02737","SJAG_01215","SJAG_07018","SJAG_04982","SJAG_04703","SJAG_02609","SJAG_01268","SJAG_03835","SJAG_01894","SJAG_02700","SJAG_01756","SJAG_04100","SJAG_04479","SJAG_02566","SJAG_02886","SJAG_00856","SJAG_00677","SJAG_01993","SJAG_03086","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90004,64217,88502,94998,93894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[113083],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[95059,114748,88503,110477,88688,84482],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[106753,105787,105019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[102598,97139,96233,96538,113088,113317],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[97140,114773],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[114254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[86874,98898,101315,86029,97908],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[110480,93897],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01268":null,"SJAG_01756":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03086":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04703":null,"SJAG_04982":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer biosynthesis","type":"exact"},{"name":"protein polymer biosynthetic process","type":"exact"},{"name":"protein polymer formation","type":"exact"}],"termid":"GO:0051258","terms_by_termid":{"GO:0007020":null,"GO:0030041":null,"GO:0030833":null,"GO:0030954":null,"GO:0042989":null,"GO:0046785":null,"GO:0051016":null,"GO:0051415":null,"GO:0051417":null}}


id: GO:0070795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore development","termid":"GO:0070795"}


id: PBO:0082871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein; implicated in the membrane insertion of tail-anchored C-terminal single transmembrane domain proteins; may function in transport of glycosylphosphatidylinositol intermediates into the ER lumen; required for normal intracellular sterol distribution; human ARV1, required for normal cholesterol and bile acid homeostasis, can complement yeast arv1 null mutant; human variant causing early onset epileptic encephalopathy is unable to rescue the yeast null","termid":"PBO:0082871"}


id: FYPO:0008199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at the centromere outer repeat is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0008199"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: PBO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit A Pcf1","termid":"PBO:0090606"}


id: GO:1903004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","PMID:22970133","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"}


id: GO:0140774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-octadecanoyl-L-lysyl-[protein] + NAD+ + H2O = octadecanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:70563","PMID:23552949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"NAD-dependent protein depalmitoylase activity","termid":"GO:0140774"}


id: PBO:0063619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4","termid":"PBO:0063619"}


id: GO:1902561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an origin recognition complex.","definition_xrefs":["PMID:11717425","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"origin recognition complex assembly","synonyms":[{"name":"ORC assembly","type":"exact"},{"name":"ORC formation","type":"exact"},{"name":"origin of replication recognition complex assembly","type":"exact"},{"name":"origin of replication recognition complex formation","type":"exact"},{"name":"origin recognition complex formation","type":"exact"}],"termid":"GO:1902561"}


id: GO:0070782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the outer leaflet of the plasma membrane of an apoptotic cell, which acts as an 'eat-me' signal for engulfing cells. Phosphatidylserine is exposed on the apoptotic cell surface by a phospholipid scramblase activity.","definition_xrefs":["GOC:mah","PMID:11536005","GOC:mtg_apoptosis","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"part_of","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"externalization of phosphatidylserine","type":"exact"}],"termid":"GO:0070782"}


id: GO:0003850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-glucose-6-phosphate + H2O = 2-deoxy-D-glucose + phosphate.","definition_xrefs":["EC:3.1.3.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-deoxyglucose-6-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.68-RXN","RHEA:22236","KEGG_REACTION:R02587"],"synonyms":[{"name":"2-deoxy-D-glucose-6-phosphate phosphohydrolase activity","type":"related"},{"name":"2-deoxyglucose-6-phosphate phosphatase activity","type":"related"}],"termid":"GO:0003850"}


id: GO:0006308
data:
  {"annotated_genes":["SJAG_01948","SJAG_01044","SJAG_01163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61796,101380],"is_not":false,"summary":null,"term":"GO:0006308"},{"annotations":[86580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032043"}]},"cv_name":"biological_process","definition":"The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"nucleobase-containing compound catabolic process","termid":"GO:0034655"},{"relation_name":"is_a","term_name":"nucleic acid catabolic process","termid":"GO:0141188"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01044":null,"SJAG_01163":null,"SJAG_01948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA breakdown","type":"exact"},{"name":"DNA catabolism","type":"exact"},{"name":"DNA degradation","type":"exact"}],"termid":"GO:0006308","terms_by_termid":{"GO:0006308":null,"GO:0032043":null}}


id: PBO:0027276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasm_during_cellular_response_to_salt_stress","termid":"PBO:0027276"}


id: PBO:0081591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 517","termid":"PBO:0081591"}


id: GO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C2H2-type zinc finger domain of a protein. The C2H2 zinc finger is the classical zinc finger domain, in which two conserved cysteines and histidines co-ordinate a zinc ion.","definition_xrefs":["Pfam:PF00096","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"C2H2 zinc finger domain binding","termid":"GO:0070742"}


id: GO:0033675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded vesicle found near the apical, or pericanalicular, membrane of a hepatocyte; contains proteins involved in bile salt transport and other fluid and solute transport processes.","definition_xrefs":["PMID:9790571","PMID:15763347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pericanalicular vesicle","termid":"GO:0033675"}


id: GO:0033775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deoxysarpagine + H+ + NADPH + O2 = H2O + NADP+ + sarpagine.","definition_xrefs":["EC:1.14.14.136","RHEA:14237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deoxysarpagine hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.91-RXN","KEGG_REACTION:R05828"],"synonyms":[{"name":"10-deoxysarpagine,NADPH:oxygen oxidoreductase (10-hydroxylating) activity","type":"related"},{"name":"DOSH","type":"related"}],"termid":"GO:0033775"}


id: PBO:0090882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Cbf5","termid":"PBO:0090882"}


id: PBO:0068209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 516","termid":"PBO:0068209"}


id: GO:0018130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterocycle biosynthetic process (obsolete GO:0018130)","termid":"GO:0018130"}


id: GO:1905853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["GOC:TermGenie","PMID:7683668","GOC:bc","GO_REF:0000059","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate binding","termid":"GO:1905853"}


id: GO:0042713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expulsion of seminal fluid, thick white fluid containing spermatozoa, from the male genital tract.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm ejaculation","termid":"GO:0042713"}


id: PBO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 6","termid":"PBO:0070471"}


id: PBO:0073224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 7A (John Milton Hagen blood group)","termid":"PBO:0073224"}


id: GO:0015283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptogenic cytochrome c release channel activity (obsolete GO:0015283)","synonyms":[{"name":"Bcl-2","type":"narrow"},{"name":"apoptogenic cytochrome c release channel activity","type":"exact"}],"termid":"GO:0015283"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: PBO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPK antisense RNA 1","termid":"PBO:0050429"}


id: PBO:0003039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Abc3, unknown specificity","termid":"PBO:0003039"}


id: PBO:0082482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cardiolipin synthase; produces cardiolipin, which is a phospholipid of the mitochondrial inner membrane that is required for normal mitochondrial membrane potential and function and for correct integration of membrane-multispanning proteins into the mitochondrial outer membrane; required to maintain tubular mitochondrial morphology and functions in mitochondrial fusion; also required for normal vacuolar ion homeostasis","termid":"PBO:0082482"}


id: PBO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 5 (predicted)","termid":"PBO:0002218"}


id: PBO:0110169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110169"}


id: PBO:0083728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane; involved in elongation of very long-chain fatty acids; evolutionarily conserved, similar to mammalian PTPLA and PTPLB; involved in sphingolipid biosynthesis and protein trafficking","termid":"PBO:0083728"}


id: PBO:0086325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to mammalian monocarboxylate permeases; monocarboxylate permeases are involved in transport of monocarboxylic acids across the plasma membrane but mutant is not deficient in monocarboxylate transport","termid":"PBO:0086325"}


id: PBO:0087810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere end-binding and capping protein; plays a key role with Pol12p in linking telomerase action with completion of lagging strand synthesis, and in a regulatory step required for telomere capping; similar to human Stn1","termid":"PBO:0087810"}


id: PBO:0067506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 646, pseudogene","termid":"PBO:0067506"}


id: PBO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasite_of","termid":"PBO:0017449"}


id: PBO:0066451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 3, pseudogene","termid":"PBO:0066451"}


id: PBO:0069974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1269, pseudogene","termid":"PBO:0069974"}


id: PBO:0004060
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor Of Cdc2","termid":"PBO:0004060"}


id: GO:1901515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of poly-beta-1,6-N-acetyl-D-glucosamine from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:15090514","PMID:18359807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"poly-beta-1,6-N-acetyl-D-glucosamine transmembrane transporter activity","termid":"GO:1901515"}


id: GO:0048298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgA isotypes","synonyms":[{"name":"activation of isotype switching to IgA isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"positive regulation of class switching to IgA isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgA isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgA isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgA isotypes","type":"exact"}],"termid":"GO:0048298"}


id: GO:0016052
data:
  {"annotated_genes":["SJAG_02649","SJAG_04660","SJAG_01017","SJAG_04789","SJAG_03646","SJAG_03851","SJAG_00310","SJAG_03444","SJAG_02435","SJAG_00027","SJAG_04963","SJAG_01029","SJAG_00096","SJAG_05006","SJAG_00633","SJAG_04238","SJAG_02076","SJAG_05314","SJAG_04048","SJAG_00461","SJAG_00620","SJAG_02949","SJAG_02131","SJAG_03295","SJAG_04851","SJAG_03660","SJAG_05001","SJAG_01888","SJAG_00115","SJAG_03824","SJAG_06621","SJAG_01171","SJAG_05272","SJAG_02010","SJAG_00685","SJAG_00667","SJAG_04334","SJAG_00237","SJAG_01209","SJAG_02478","SJAG_03373","SJAG_04301","SJAG_02009","SJAG_02369","SJAG_01561","SJAG_03174","SJAG_03903","SJAG_03828","SJAG_00605","SJAG_03958","SJAG_04859","SJAG_01783","SJAG_04850","SJAG_03013","SJAG_02945","SJAG_04495","SJAG_02796","SJAG_06622","SJAG_01310","SJAG_02107","SJAG_04320","SJAG_04192","SJAG_04276","SJAG_02718","SJAG_06309","SJAG_04327","SJAG_00839","SJAG_03852","SJAG_02135"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83853,83854,90234,91008,98400,98407,98408,100157,113899,114440,114877],"is_not":false,"summary":null,"term":"GO:0016052"},{"annotations":[84828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[107476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072316"},{"annotations":[91191,91929,97333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[97667,87943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[94439,101607,105562,105100,101972,105097,99804,105094,105566,91186,105564,105568,101608,100616,105096,105098,105567,112503,99545,101606,94167,105099,105095,105565,101973,90696,105563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[85301,115483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[90200,96295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[107739,94355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"},{"annotations":[100508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[91193,91930,97334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[107478,90202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072000"},{"annotations":[105066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"},{"annotations":[98107,98106,84508,102850,104235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[112505,89233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[99463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[100619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94356,107740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[93777,104817,86285,94774,96435,105944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[97752,97751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[96503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[72033,75077],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[92282,92281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009313"},{"annotations":[83677,104559,92283,92284,111766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000272"},{"annotations":[92750],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[85894],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[75080],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[101198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[112275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[107673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"},{"annotations":[115126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00115":null,"SJAG_00237":null,"SJAG_00310":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00633":null,"SJAG_00667":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01017":null,"SJAG_01029":null,"SJAG_01171":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01888":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02076":null,"SJAG_02107":null,"SJAG_02131":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02435":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02949":null,"SJAG_03013":null,"SJAG_03174":null,"SJAG_03295":null,"SJAG_03373":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03660":null,"SJAG_03824":null,"SJAG_03828":null,"SJAG_03851":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04238":null,"SJAG_04276":null,"SJAG_04301":null,"SJAG_04320":null,"SJAG_04327":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04859":null,"SJAG_04963":null,"SJAG_05001":null,"SJAG_05006":null,"SJAG_05272":null,"SJAG_05314":null,"SJAG_06309":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"carbohydrate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:24699070":null},"secondary_identifiers":["GO:0044724","GO:0006095","GO:0044276"],"synonyms":[{"name":"carbohydrate breakdown","type":"exact"},{"name":"carbohydrate catabolism","type":"exact"},{"name":"carbohydrate degradation","type":"exact"},{"name":"catabolic carbohydrate metabolic process","type":"exact"},{"name":"catabolic carbohydrate metabolism","type":"exact"},{"name":"multicellular organismal carbohydrate catabolic process","type":"narrow"},{"name":"single-organism carbohydrate catabolic process","type":"related"}],"termid":"GO:0016052","terms_by_termid":{"GO:0000025":null,"GO:0000272":null,"GO:0005980":null,"GO:0005987":null,"GO:0005993":null,"GO:0005995":null,"GO:0005998":null,"GO:0006062":null,"GO:0006096":null,"GO:0009251":null,"GO:0009313":null,"GO:0016052":null,"GO:0019303":null,"GO:0019388":null,"GO:0019563":null,"GO:0019564":null,"GO:0019568":null,"GO:0030995":null,"GO:0034232":null,"GO:0042843":null,"GO:0043456":null,"GO:0044347":null,"GO:0045820":null,"GO:0046177":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0061723":null,"GO:0072000":null,"GO:0072316":null,"GO:1905857":null,"GO:2001172":null}}


id: PBO:0083779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein required for 40S ribosome biogenesis; associate with snR30; physically and functionally interacts with Krr1p","termid":"PBO:0083779"}


id: PBO:0089728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu2","termid":"PBO:0089728"}


id: PBO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G elongation factor mitochondrial 1","termid":"PBO:0048549"}


id: PBO:0030578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_alanine_level","termid":"PBO:0030578"}


id: GO:0016209
data:
  {"annotated_genes":["SJAG_04788","SJAG_04953","SJAG_04399","SJAG_03166","SJAG_04823","SJAG_00489","SJAG_03303","SJAG_04125","SJAG_01216","SJAG_05181","SJAG_00141","SJAG_03653","SJAG_02630","SJAG_04632","SJAG_01734","SJAG_01292","SJAG_01162","SJAG_01199","SJAG_02515","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96152],"is_not":false,"summary":null,"term":"GO:0016209"},{"annotations":[114393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004096"},{"annotations":[94124,95434,85610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004602"},{"annotations":[101376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[112879,113500,102950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004601"},{"annotations":[101456,113501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051920"},{"annotations":[97963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032542"},{"annotations":[85194,96310,106311,100166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004784"},{"annotations":[69313,113503,105001,91372,101193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"},{"annotations":[105002,113504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140824"},{"annotations":[106264,78301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"antioxidant activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016209","terms_by_termid":{"GO:0004096":null,"GO:0004362":null,"GO:0004601":null,"GO:0004602":null,"GO:0004784":null,"GO:0004791":null,"GO:0008379":null,"GO:0016209":null,"GO:0032542":null,"GO:0051920":null,"GO:0140824":null}}


id: MOD:00598
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(2-hydroxyethyl)cysteine","definition_xrefs":["PubMed:15351294","Unimod:278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-hydroxyethyl)cysteine","synonyms":[{"name":"Ethanolation of Cys","type":"related"},{"name":"Ethanolyl","type":"related"}],"termid":"MOD:00598"}


id: PBO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldose reductase ARK13 family YakC","termid":"PBO:0002430"}


id: PATO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000030 enzyme composition (obsolete PATO:0000030)","termid":"PATO:0000030"}


id: PBO:0064502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2D pseudogene 1","termid":"PBO:0064502"}


id: PBO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 8 subfamily B member 1","termid":"PBO:0044470"}


id: GO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid","synonyms":[{"name":"response to jasmonic acid stimulus","type":"exact"}],"termid":"GO:0009753"}


id: GO:0052010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host cell wall cellulose (obsolete GO:0052010)","synonyms":[{"name":"catabolism by organism of host cell wall cellulose","type":"exact"}],"termid":"GO:0052010"}


id: PBO:0038787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase","termid":"PBO:0038787"}


id: FYPO:0004964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer actin cortical patches than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"actin cortical patches present in decreased numbers","synonyms":[{"name":"F-actin patches present in decreased numbers","type":"exact"},{"name":"actin cortical patches present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"actin cortical patches present in decreased numbers during vegetative growth","type":"exact"},{"name":"actin cortical patches present in reduced numbers","type":"exact"},{"name":"actin patches present in decreased numbers","type":"exact"},{"name":"decreased actin cortical patch formation during vegetative growth","type":"related"},{"name":"decreased number of actin cortical patches during vegetative growth","type":"exact"},{"name":"fewer actin cortical patches present during vegetative growth","type":"exact"}],"termid":"FYPO:0004964"}


id: PBO:0029228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nocodazole","termid":"PBO:0029228"}


id: PBO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 8","termid":"PBO:0004973"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["Wikipedia:Enkephalin","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: PBO:0086552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL034C is not an essential gene","termid":"PBO:0086552"}


id: PBO:0017049
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ste20 Homologous Kinase","termid":"PBO:0017049"}


id: PBO:0052416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and short cytoplasmic tail 1","termid":"PBO:0052416"}


id: PBO:0062867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTUD4 pseudogene 1","termid":"PBO:0062867"}


id: PBO:0089376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec74","termid":"PBO:0089376"}


id: GO:0002801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antifungal peptide production","termid":"GO:0002789"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide secretion","termid":"GO:0002795"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide secretion","termid":"GO:0002800"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide secretion","termid":"GO:0002782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0010467","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal peptide secretion","synonyms":[{"name":"down regulation of antifungal peptide secretion","type":"exact"},{"name":"down-regulation of antifungal peptide secretion","type":"exact"},{"name":"downregulation of antifungal peptide secretion","type":"exact"},{"name":"inhibition of antifungal peptide secretion","type":"narrow"}],"termid":"GO:0002801"}


id: GO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide secretion","termid":"GO:0002791"}


id: GO:0080119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the formation of ER (endoplasmic reticulum) body. ER body is a compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae species.","definition_xrefs":["PMID:19147648","PMID:18780803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ER body organization","synonyms":[{"name":"ER body organisation","type":"exact"},{"name":"ER body organization and biogenesis","type":"related"},{"name":"endoplasmic reticulum body organization","type":"exact"},{"name":"endoplasmic reticulum body organization and biogenesis","type":"related"}],"termid":"GO:0080119"}


id: PR:Q9HFE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fet4 gene.","definition_xrefs":["UniProtKB:Q9HFE1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low-affinity iron/zinc ion transport protein fet4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP26C9.03c","synonyms":[{"name":"Spom972h-fet4","type":"exact"}],"termid":"PR:Q9HFE1"}


id: FYPO:0000742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0007578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to actin cortical patch","synonyms":[{"name":"abnormal protein localisation to actin cortical patch","type":"exact"},{"name":"abnormal protein localization to F-actin patch","type":"exact"},{"name":"abnormal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"abnormal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000742"}


id: GO:0061734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A positive regulation of the macromitophagy pathway that is triggered by mitochondrial depolarization and requires the function of a parkin-family molecule.","definition_xrefs":["GOC:autophagy","PMID:25349190","GOC:dph","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitophagy in response to mitochondrial depolarization","termid":"GO:0098779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","synonyms":[{"name":"PRKN-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"Park2-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:0061734"}


id: GO:0006654
data:
  {"annotated_genes":["SJAG_04319","SJAG_01036","SJAG_01957","SJAG_01519","SJAG_04883","SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87359,89227,90214,92105,95896,106086],"is_not":false,"summary":null,"term":"GO:0006654"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidic acid metabolic process","termid":"GO:0046473"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_01519":null,"SJAG_01957":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidic acid anabolism","type":"exact"},{"name":"phosphatidic acid biosynthesis","type":"exact"},{"name":"phosphatidic acid formation","type":"exact"},{"name":"phosphatidic acid synthesis","type":"exact"}],"termid":"GO:0006654","terms_by_termid":{"GO:0006654":null}}


id: FYPO:0000057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitochondrial nucleoid is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"mitochondrial nucleoid enlarged","synonyms":[{"name":"mitochondrial nucleoid enlarged during mitotic cell cycle","type":"related"},{"name":"mitochondrial nucleoid enlarged during vegetative growth","type":"exact"}],"termid":"FYPO:0000057"}


id: PBO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorant binding protein 2A","termid":"PBO:0061771"}


id: PBO:0077357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 97 pseudogene 1","termid":"PBO:0077357"}


id: GO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0046022)","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"mitotic activation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter during mitosis","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, mitotic","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"}],"termid":"GO:0046022"}


id: GO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of a cytokine.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine production","secondary_identifiers":["GO:0050710","GO:0042036"],"synonyms":[{"name":"down regulation of cytokine biosynthetic process","type":"exact"},{"name":"down regulation of cytokine production","type":"exact"},{"name":"down-regulation of cytokine biosynthetic process","type":"exact"},{"name":"down-regulation of cytokine production","type":"exact"},{"name":"downregulation of cytokine biosynthetic process","type":"exact"},{"name":"downregulation of cytokine production","type":"exact"},{"name":"inhibition of cytokine biosynthetic process","type":"narrow"},{"name":"inhibition of cytokine production","type":"narrow"},{"name":"negative regulation of cytokine anabolism","type":"exact"},{"name":"negative regulation of cytokine biosynthesis","type":"exact"},{"name":"negative regulation of cytokine biosynthetic process","type":"narrow"},{"name":"negative regulation of cytokine formation","type":"exact"},{"name":"negative regulation of cytokine secretion","type":"narrow"},{"name":"negative regulation of cytokine synthesis","type":"exact"}],"termid":"GO:0001818"}


id: PBO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R1","termid":"PBO:0047836"}


id: FYPO:0000483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mitotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of mitotic recombination","synonyms":[{"name":"increased rate of mitotic recombination during mitotic cell cycle","type":"related"},{"name":"increased rate of mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: increased rate","type":"related"}],"termid":"FYPO:0000483"}


id: PATO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning away from an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misaligned with","termid":"PATO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned away from","termid":"PATO:0002174"}


id: PBO:0028788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_assembly","termid":"PBO:0028788"}


id: PBO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp22","termid":"PBO:0000839"}


id: PBO:0064719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 55","termid":"PBO:0064719"}


id: GO:0038099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex containing a type II activin receptor, a type I activin receptor, and a coreceptor of the EGF-CFC family (e.g. Cripto or Cryptic, in mammals).","definition_xrefs":["GOC:signaling","PMID:15062104","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"nodal receptor complex assembly","synonyms":[{"name":"ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"nodal receptor complex formation","type":"exact"}],"termid":"GO:0038099"}


id: GO:0102337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA(4-) + malonyl-CoA(5-) + H+ = 3-oxohexacosanoyl-CoA + carbon dioxide + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA synthase activity (obsolete GO:0102337)","termid":"GO:0102337"}


id: GO:0003234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the bulbus arteriosus from unspecified parts. The bulbus arteriosus is an elastic chamber of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber formation","termid":"GO:0003207"},{"relation_name":"part_of","term_name":"bulbus arteriosus morphogenesis","termid":"GO:0003233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bulbus arteriosus formation","termid":"GO:0003234"}


id: PBO:0039468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 16","termid":"PBO:0039468"}


id: PBO:0090864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPAC664.13 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090864"}


id: PBO:0054752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2162","termid":"PBO:0054752"}


id: GO:1903314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen cycle metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0008150","GO:0071941"],"is_obsolete":false,"name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"}


id: FYPO:0006461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in telomeric regions during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at telomere during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at telomere during first meiotic nuclear division","type":"exact"},{"name":"increased telomeric histone H2A phosphorylation during meiosis I","type":"exact"}],"termid":"FYPO:0006461"}


id: PBO:0039825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor interacting protein 2","termid":"PBO:0039825"}


id: PBO:0056504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 6","termid":"PBO:0056504"}


id: FYPO:0001917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, contains a single septum, has one nucleus in the septated cell, and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"elongated monoseptate vegetative cell","termid":"FYPO:0004979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0000337"],"is_obsolete":false,"name":"inviable elongated mononucleate monoseptate vegetative cell","synonyms":[{"name":"inviable elongated mononucleate monoseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable long monoseptate mononucleate cell","type":"exact"},{"name":"lethal; elongated mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0001917"}


id: PBO:0031017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1_phase_entry","termid":"PBO:0031017"}


id: GO:1904201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iodide transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"regulates","term_name":"iodide transport","termid":"GO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of iodide transport","termid":"GO:1904201"}


id: GO:1990429
data:
  {"annotated_genes":["SJAG_03324","SJAG_02693","SJAG_00891","SJAG_05315"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92644,93129,97458,99250],"is_not":false,"summary":null,"term":"GO:1990429"}]},"cv_name":"cellular_component","definition":"A protein complex responsible for transporting proteins into the peroxisomal matrix. An example of this complex is Pex14 found in S. cerevisae which has 9 core components and 12 transient interaction partners.","definition_xrefs":["PMID:12667447","PMID:20154681","PMID:22375831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00891":null,"SJAG_02693":null,"SJAG_03324":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"peroxisomal importomer complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990415"],"synonyms":[{"name":"Pex14 complex","type":"narrow"},{"name":"Pex17p-Pex14p docking complex","type":"related"},{"name":"peroxisomal import pore","type":"exact"},{"name":"peroxisomal protein import machinery","type":"exact"}],"termid":"GO:1990429","terms_by_termid":{"GO:1990429":null}}


id: SO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is not transcribed under normal conditions and is not critical to normal cellular functioning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cryptic","termid":"SO:0000976"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_gene","synonyms":[{"name":"cryptic gene","type":"exact"}],"termid":"SO:0001431"}


id: PBO:0076982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THADA armadillo repeat containing","termid":"PBO:0076982"}


id: GO:0140592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 8) = S-adenosyl-L-homocysteine + (histone H3-N-methyl-arginine (position 8). This reaction is the addition of a methyl group to the arginine residue at position 8 of histone H3.","definition_xrefs":["PMID:31533925","PMID:20708585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"histone H3R8 methyltransferase activity","synonyms":[{"name":"histone H3R8 arginine methylase activity","type":"exact"},{"name":"histone H3R8 arginine methyltransferase activity","type":"exact"},{"name":"histone methyltransferase activity (H3-R8 specific)","type":"exact"},{"name":"histone-H3R8 methyltransferase activity","type":"exact"}],"termid":"GO:0140592"}


id: PBO:0069716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 996, pseudogene","termid":"PBO:0069716"}


id: GO:1990887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol-n + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10419476"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol O-methyltransferase activity (obsolete GO:1990887)","termid":"GO:1990887"}


id: PBO:0060377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYBPC2 cis regulating lncRNA enhancer of myogenesis","termid":"PBO:0060377"}


id: PBO:0029352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding","termid":"PBO:0029352"}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity","termid":"GO:2000116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: PATO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of extent of the receptiveness of a female to male advances.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptivity","termid":"PATO:0001719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female receptivity","termid":"PATO:0001720"}


id: PBO:0051235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-40-1 (pseudogene)","termid":"PBO:0051235"}


id: FYPO:0000585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall biogenesis does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"},{"relation_name":"is_a","term_name":"abolished cell wall biogenesis","termid":"FYPO:0003639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000121","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished ascospore wall biogenesis","synonyms":[{"name":"absent spore wall formation","type":"related"},{"name":"ascospore wall biogenesis abolished","type":"exact"},{"name":"spore wall formation abolished","type":"related"},{"name":"spore wall formation: absent","type":"related"}],"termid":"FYPO:0000585"}


id: GO:0045015
data:
  {"annotated_genes":["SJAG_02418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109799],"is_not":false,"summary":null,"term":"GO:0045015"}]},"cv_name":"molecular_function","definition":"Binding to a HDEL sequence, the C terminus tetrapeptide sequence His-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["PMID:1327759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005048","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"HDEL sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HDEL receptor activity","type":"narrow"}],"termid":"GO:0045015","terms_by_termid":{"GO:0045015":null}}


id: GO:0042861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of achromobactin, a citrate siderophore.","definition_xrefs":["GOC:jl","PMID:10928541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"achromobactin metabolic process","termid":"GO:0042860"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"achromobactin biosynthetic process","secondary_identifiers":["GO:0031181","GO:0031182"],"synonyms":[{"name":"achromobactin anabolism","type":"exact"},{"name":"achromobactin biosynthesis","type":"exact"},{"name":"achromobactin formation","type":"exact"},{"name":"achromobactin synthesis","type":"exact"}],"termid":"GO:0042861"}


id: PBO:0059261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L27","termid":"PBO:0059261"}


id: GO:0098618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-selenomethionine + tRNA(Met) => AMP + diphosphate + selenomethionyl-tRNA(Met).","definition_xrefs":["PMID:16661782","PMID:16661668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"selenomethionine-tRNA ligase activity","secondary_identifiers":["Reactome:R-HSA-2408546"],"termid":"GO:0098618"}


id: PBO:0053282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens intrinsic membrane protein 2","termid":"PBO:0053282"}


id: PBO:0004578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex subunit (predicted)","termid":"PBO:0004578"}


id: GO:0032123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Inward projections of the cytoskeletal structures of the oral apparatus, which form a fiber that extends past the cytostome into the cytoplasm.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"oral apparatus","termid":"GO:0031912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"deep fiber","synonyms":[{"name":"deep fibre","type":"exact"}],"termid":"GO:0032123"}


id: PBO:0071773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 1","termid":"PBO:0071773"}


id: PBO:0056596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 1","termid":"PBO:0056596"}


id: MOD:01708
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"},{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"}


id: GO:0016743
data:
  {"annotated_genes":["SJAG_00635","SJAG_00412","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89598,102675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004070"},{"annotations":[94343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004585"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00635":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"carboxyl- or carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.3.-"],"synonyms":[{"name":"carboxyl- and carbamoyltransferase activity","type":"exact"}],"termid":"GO:0016743","terms_by_termid":{"GO:0004070":null,"GO:0004585":null}}


id: PBO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.1","termid":"PBO:0000131"}


id: PBO:0053047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4 pseudogene","termid":"PBO:0053047"}


id: PBO:0055916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A4, pseudogene","termid":"PBO:0055916"}


id: PBO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroguidin","termid":"PBO:0060977"}


id: GO:0033598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland epithelial cells, resulting in the expansion of a cell population. Mammary gland epithelial cells make up the covering of surfaces of the mammary gland. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}


id: PBO:0085145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 645; involved in pre-rRNA cleavage at site A2; mutation is synthetically lethal with gar1 mutation; deletion disrupts telomere maintenance by influencing expression of neighboring gene STN1; mammalian homolog nucleomethylin has been linked to nutrient availability signaling pathways and obesity","termid":"PBO:0085145"}


id: GO:1905753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of argininosuccinate synthase activity.","definition_xrefs":["PMID:19491403","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of argininosuccinate synthase activity (obsolete GO:1905753)","synonyms":[{"name":"activation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"narrow"},{"name":"activation of arginine succinate synthetase activity","type":"narrow"},{"name":"activation of argininosuccinate synthase activity","type":"narrow"},{"name":"activation of argininosuccinate synthetase activity","type":"narrow"},{"name":"activation of argininosuccinic acid synthetase activity","type":"narrow"},{"name":"activation of arginosuccinate synthetase activity","type":"narrow"},{"name":"activation of citrulline--aspartate ligase activity","type":"narrow"},{"name":"positive regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of arginine succinate synthetase activity","type":"exact"},{"name":"positive regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"positive regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"positive regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"positive regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"up regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"up regulation of arginine succinate synthetase activity","type":"exact"},{"name":"up regulation of argininosuccinate synthase activity","type":"exact"},{"name":"up regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"up regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"up regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"up regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"up-regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of arginine succinate synthetase activity","type":"exact"},{"name":"up-regulation of argininosuccinate synthase activity","type":"exact"},{"name":"up-regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"up-regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"up-regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"up-regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"upregulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"upregulation of arginine succinate synthetase activity","type":"exact"},{"name":"upregulation of argininosuccinate synthase activity","type":"exact"},{"name":"upregulation of argininosuccinate synthetase activity","type":"exact"},{"name":"upregulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"upregulation of arginosuccinate synthetase activity","type":"exact"},{"name":"upregulation of citrulline--aspartate ligase activity","type":"exact"}],"termid":"GO:1905753"}


id: GO:0015994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll metabolic process","synonyms":[{"name":"chlorophyll metabolism","type":"exact"}],"termid":"GO:0015994"}


id: PBO:0084977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is upregulated in cells treated with the aldehydes furfural and glycolaldehyde, the mycotoxin patulin, and also the quinone methide triterpene celastrol; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0084977"}


id: GO:0036042
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99634],"is_not":false,"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to a long-chain fatty acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pm","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA binding","termid":"GO:0000062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acyl-coenyme A binding","type":"exact"}],"termid":"GO:0036042","terms_by_termid":{"GO:0036042":null}}


id: PBO:0064983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich acidic protein 1","termid":"PBO:0064983"}


id: PBO:0080223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide receptor 2","termid":"PBO:0080223"}


id: GO:0141180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A chromatin-protein adaptor activity that bridges dsDNA and chromatin proteins to bring regions of a chromosome in proximity. The DNA:DNA:RNA triple-helical structure is formed non-Watson-Crick base-pairing.","definition_xrefs":["PMID:35412350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"dsDNA-RNA triple helix-forming chromatin adaptor activity","termid":"GO:0141180"}


id: PBO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc4","termid":"PBO:0002330"}


id: PBO:0085404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI;","termid":"PBO:0085404"}


id: PBO:0055720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin A/C","termid":"PBO:0055720"}


id: GO:0033267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of an axon, a cell projection of a neuron.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axon part (obsolete GO:0033267)","termid":"GO:0033267"}


id: PBO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 21 pseudogene","termid":"PBO:0042646"}


id: FYPO:0006443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of amino acid biosynthesis genes from RNA polymerase II promoters occurs to a lower extent than normal. Amino acid biosynthesis genes are those whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription of amino acid biosynthesis genes","synonyms":[{"name":"decreased transcription of amino acid biosynthesis genes during mitotic cell cycle","type":"related"},{"name":"decreased transcription of amino acid biosynthesis genes during vegetative growth","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes from RNA pol II promoter","type":"exact"},{"name":"reduced transcription of amino acid biosynthesis genes","type":"exact"}],"termid":"FYPO:0006443"}


id: PBO:0065682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin synthase","termid":"PBO:0065682"}


id: PBO:0051789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F6","termid":"PBO:0051789"}


id: FYPO:0001460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is increased following a calcium ion stimulus.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased transcription from CDRE promoter in response to calcium ion","synonyms":[{"name":"increased transcription from CDRE promoter in response to calcium ion during mitotic cell cycle","type":"related"},{"name":"increased transcription from CDRE promoter in response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0001460"}


id: PBO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filaggrin 2","termid":"PBO:0047673"}


id: PBO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position ade5","termid":"PBO:0005861"}


id: PBO:0064603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 1","termid":"PBO:0064603"}


id: FYPO:0002522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is decreased. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"},{"relation_name":"is_a","term_name":"abnormal poly(A)+ mRNA export from nucleus","termid":"FYPO:0000183"},{"relation_name":"is_a","term_name":"decreased nuclear export","termid":"FYPO:0000508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"decreased polyadenylated mRNA export from nucleus","type":"exact"},{"name":"reduced poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0002522"}


id: PBO:0004193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit 2 (predicted)","termid":"PBO:0004193"}


id: PBO:0086659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; homozygous diploid deletion strain exhibits low budding index; physically interacts with Hsp82p; YPL257W is not an essential gene","termid":"PBO:0086659"}


id: PBO:0041111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 4","termid":"PBO:0041111"}


id: GO:0033814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA.","definition_xrefs":["EC:2.3.1.176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"propanoyl-CoA C-acyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.176-RXN","RHEA:16865"],"synonyms":[{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase activity","type":"related"},{"name":"PTE-2","type":"related"},{"name":"SCP-X","type":"related"},{"name":"SCPchi","type":"related"},{"name":"peroxisomal thiolase 2 activity","type":"narrow"},{"name":"sterol carrier protein-X","type":"related"},{"name":"sterol carrier protein-chi","type":"related"}],"termid":"GO:0033814"}


id: SO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Clustered Palindromic Repeats interspersed with bacteriophage derived spacer sequences.","definition_xrefs":["RFAM:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct_repeat","termid":"SO:0000314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRISPR","secondary_identifiers":["http:en.wikipedia.org/wiki/CRISPR"],"synonyms":[{"name":"CRISPR element","type":"exact"},{"name":"Clustered_Regularly_Interspaced_Short_Palindromic_Repeat","type":"exact"}],"termid":"SO:0001459"}


id: PBO:0042156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 17","termid":"PBO:0042156"}


id: PBO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit (predicted)","termid":"PBO:0005019"}


id: PBO:0068871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 111, pseudogene","termid":"PBO:0068871"}


id: GO:0097048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","CL:0000451","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell apoptotic process","synonyms":[{"name":"dendritic cell apoptosis","type":"narrow"}],"termid":"GO:0097048"}


id: PBO:0059704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 12","termid":"PBO:0059704"}


id: GO:1990481
data:
  {"annotated_genes":["SJAG_00088","SJAG_00319","SJAG_02978","SJAG_04754","SJAG_04065"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90830,91528,98647,108653,110451],"is_not":false,"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an mRNA molecule.","definition_xrefs":["PMID:25192136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA pseudouridylation","type":"exact"}],"termid":"GO:1990481","terms_by_termid":{"GO:1990481":null}}


id: PBO:0051992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Janus kinase and microtubule interacting protein 3","termid":"PBO:0051992"}


id: PR:O42922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.17c gene.","definition_xrefs":["UniProtKB:O42922","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C16A3.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.17c","synonyms":[{"name":"Spom972h-SPBC16A3.17c","type":"exact"}],"termid":"PR:O42922"}


id: GO:0014805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle adaptation","synonyms":[{"name":"smooth muscle plasticity","type":"related"}],"termid":"GO:0014805"}


id: PBO:0072544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 74","termid":"PBO:0072544"}


id: SO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partial DNA sequence assembly of a chromosome or full genome, which contains gaps that are filled with N's.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_genomic_sequence_assembly","synonyms":[{"name":"partial genomic sequence assembly","type":"exact"},{"name":"pseudomolecule","type":"broad"},{"name":"sequence assembly with N-gaps","type":"exact"}],"termid":"SO:0001876"}


id: PBO:0060376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb related transcription factor, partner of profilin","termid":"PBO:0060376"}


id: PBO:0083531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SNX41","termid":"PBO:0083531"}


id: PR:P29458
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11630:SF45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.17","secondary_identifiers":["UniProtKB:P29458"],"synonyms":[{"name":"SPCC16A11.17","type":"related"},{"name":"Spom972h-MCM4","type":"exact"},{"name":"cdc21","type":"related"},{"name":"cell division control protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P29458"}


id: GO:1900560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of austinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"austinol metabolic process","termid":"GO:1900558"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol biosynthetic process","synonyms":[{"name":"austinol anabolism","type":"exact"},{"name":"austinol biosynthesis","type":"exact"},{"name":"austinol formation","type":"exact"},{"name":"austinol synthesis","type":"exact"}],"termid":"GO:1900560"}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"aspartate-2-keto-4-methylthiobutyrate transaminase activity","termid":"GO:0046571"}


id: PBO:0031300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_spindle","termid":"PBO:0031300"}


id: PBO:0086905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ubiquitin-specific protease; concentrates at the bud neck; UBP5 has a paralog, DOA4, that arose from the whole genome duplication","termid":"PBO:0086905"}


id: GO:0046060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dATP metabolic process","synonyms":[{"name":"dATP metabolism","type":"exact"}],"termid":"GO:0046060"}


id: SO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that has a sequence that overlaps the sequence of another gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_to_gene_feature","termid":"SO:0000067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping","termid":"SO:0000068"}


id: PBO:0043299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 18 member A","termid":"PBO:0043299"}


id: PBO:0051870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 2","termid":"PBO:0051870"}


id: PBO:0058800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7706","termid":"PBO:0058800"}


id: PATO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular quality","secondary_identifiers":["PATO:0002061"],"synonyms":[{"name":"relational molecular quality","type":"exact"}],"termid":"PATO:0002182"}


id: PBO:0057974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689f","termid":"PBO:0057974"}


id: GO:0090552
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is the apical most portion of a unicellular trichome.","definition_xrefs":["GOC:PO_curators","PO:0025537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome apex","termid":"GO:0090552"}


id: GO:0015275
data:
  {"annotated_genes":["SJAG_02532","SJAG_04668","SJAG_02877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88528,88587,110094],"is_not":false,"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens in response to a mechanical stress in the form of stretching.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"stretch-activated, monoatomic cation-selective, calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stretch-activated, cation-selective, calcium channel activity","type":"broad"}],"termid":"GO:0015275","terms_by_termid":{"GO:0015275":null}}


id: GO:0004380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-N-acetyl-alpha-D-galactosaminyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose.","definition_xrefs":["EC:2.4.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9034042","MetaCyc:2.4.1.40-RXN","RHEA:19021","Reactome:R-HSA-9033959"],"synonyms":[{"name":"A transferase activity","type":"related"},{"name":"A-transferase activity","type":"related"},{"name":"UDP-GalNAc:Fucalpha1->2Galalpha1->3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:alpha-L-fucosyl-1,2-D-galactose 3-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"alpha-3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"blood-group substance A-dependent acetylgalactosaminyltransferase activity","type":"related"},{"name":"blood-group substance alpha-acetyltransferase activity","type":"related"},{"name":"fucosylgalactose acetylgalactosaminyltransferase activity","type":"related"},{"name":"fucosylgalactose alpha-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"histo-blood group A acetylgalactosaminyltransferase activity","type":"narrow"},{"name":"histo-blood group A glycosyltransferase (Fucalpha1->2Galalpha1->3-N-acetylgalactosaminyltransferase)","type":"related"},{"name":"histo-blood group A transferase activity","type":"related"}],"termid":"GO:0004380"}


id: GO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030931"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"}


id: PR:Q8TFG6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk18 gene.","definition_xrefs":["UniProtKB:Q8TFG6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.02c","synonyms":[{"name":"Spom972h-ppk18","type":"exact"}],"termid":"PR:Q8TFG6"}


id: FYPO:0006911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hexestrol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on hexestrol","synonyms":[{"name":"normal cell population growth in presence of hexestrol","type":"exact"},{"name":"normal cell population growth on hexestrol","type":"exact"},{"name":"normal cellular response to hexestrol","type":"related"},{"name":"normal vegetative cell population growth on hexestrol","type":"exact"}],"termid":"FYPO:0006911"}


id: GO:0075529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a circular structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a circular episome","synonyms":[{"name":"establishment of circular plasmid latency","type":"exact"},{"name":"establishment of latency as a circular plasmid","type":"exact"}],"termid":"GO:0075529"}


id: PBO:0076957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta induced","termid":"PBO:0076957"}


id: PBO:0089046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug130","termid":"PBO:0089046"}


id: PBO:0065514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein prenyltransferase alpha subunit repeat containing 1","termid":"PBO:0065514"}


id: PBO:0004805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1 (predicted)","termid":"PBO:0004805"}


id: FYPO:0000877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000877"}


id: PBO:0016544
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer2 can form a catalytically active complex with human DHDS (hCIT)","termid":"PBO:0016544"}


id: FYPO:0000858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal nucleosome positioning in heterochromatin","synonyms":[{"name":"normal nucleosome occupancy in heterochromatin","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000858"}


id: PBO:0072873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB2 antisense RNA 1","termid":"PBO:0072873"}


id: PBO:0080003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 12","termid":"PBO:0080003"}


id: PBO:0039610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR like","termid":"PBO:0039610"}


id: PBO:0003965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S35","termid":"PBO:0003965"}


id: GO:0097260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene A4 = eoxin A4.","definition_xrefs":["GOC:mw","PMID:18184802","PMID:18647347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"eoxin A4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2162019"],"termid":"GO:0097260"}


id: GO:0097073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 5.","definition_xrefs":["GOC:cna","PMID:16751392","PMID:12138184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 5 complex","synonyms":[{"name":"IRF5:IRF5 complex","type":"exact"}],"termid":"GO:0097073"}


id: FYPO:0001673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear morphology","termid":"FYPO:0001673"}


id: GO:0016691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R-H + 2 chloride + H2O2 = 2 R-Cl + 2 H2O.","definition_xrefs":["EC:1.11.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"chloride peroxidase activity","secondary_identifiers":["GO:0016957","GO:0016958","GO:0016956","MetaCyc:CHLORIDE-PEROXIDASE-RXN","GO:0016955"],"synonyms":[{"name":"chloride:hydrogen-peroxide oxidoreductase","type":"related"},{"name":"chloroperoxidase activity","type":"related"},{"name":"cofactor-free chloroperoxidase activity","type":"narrow"},{"name":"flavin-haem chloroperoxidase activity","type":"narrow"},{"name":"flavin-heme chloroperoxidase activity","type":"narrow"},{"name":"haem chloroperoxidase activity","type":"narrow"},{"name":"heme chloroperoxidase activity","type":"narrow"},{"name":"vanadium chloroperoxidase activity","type":"narrow"}],"termid":"GO:0016691"}


id: FYPO:0001299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which palmitoyl-CoA ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"abolished long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000002","FYPO:0000707","FYPO:0000661","FYPO:0005447"],"is_obsolete":false,"name":"abolished palmitoyl-CoA ligase activity","synonyms":[{"name":"abolished palmitoyl-CoA synthetase activity","type":"exact"},{"name":"palmitoyl-CoA ligase activity abolished","type":"exact"}],"termid":"FYPO:0001299"}


id: PBO:0038761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 6","termid":"PBO:0038761"}


id: PR:O94457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg31 gene.","definition_xrefs":["UniProtKB:O94457","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(7)-sterol 5(6)-desaturase erg31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.16c","synonyms":[{"name":"C-5 sterol desaturase erg31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg31","type":"exact"},{"name":"ergosterol Delta(5,6) desaturase erg31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sterol-C5-desaturase erg31 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94457"}


id: GO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cAMP","synonyms":[{"name":"response to 3',5' cAMP","type":"exact"},{"name":"response to 3',5'-cAMP","type":"exact"},{"name":"response to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"response to cyclic AMP","type":"exact"}],"termid":"GO:0051591"}


id: PBO:0084970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent glutamate dehydrogenase; degrades glutamate to ammonia and alpha-ketoglutarate; expression sensitive to nitrogen catabolite repression and intracellular ammonia levels; genetically interacts with GDH3 by suppressing stress-induced apoptosis","termid":"PBO:0084970"}


id: FYPO:0007321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased stress granule assembly during vegetative growth","synonyms":[{"name":"decreased cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"decreased stress granule assembly during mitotic cell cycle","type":"related"},{"name":"decreased stress granule formation during vegetative growth","type":"exact"},{"name":"reduced stress granule assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007321"}


id: FYPO:0008089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion fusion is abnormal.","definition_xrefs":["PMID:37590302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrial fusion","termid":"FYPO:0008089"}


id: PBO:0059677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 43","termid":"PBO:0059677"}


id: PBO:0049477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.1 linker histone, cluster member","termid":"PBO:0049477"}


id: PBO:0045219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 4","termid":"PBO:0045219"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109673],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1475022","Reactome:R-HSA-1475025","Reactome:R-HSA-1475026","Reactome:R-HSA-1475028","Reactome:R-HSA-1237081","Reactome:R-HSA-1475435","Reactome:R-HSA-1475436","RHEA:10748","Reactome:R-HSA-1475032","Reactome:R-HSA-1237045","Reactome:R-HSA-1237047","Reactome:R-HSA-1237059","MetaCyc:RXN0-5224","Reactome:R-HSA-1475017"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: PATO:0001160
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001160 unconcentrated (obsolete PATO:0001160)","termid":"PATO:0001160"}


id: GO:0015487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: melibiose(out) + monovalent cation(out) = melibiose(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"melibiose transmembrane transporter activity","termid":"GO:0015156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"melibiose:monoatomic cation symporter activity","synonyms":[{"name":"melibiose permease activity","type":"related"},{"name":"melibiose:cation symporter activity","type":"broad"},{"name":"melibiose:monovalent cation symporter activity","type":"exact"}],"termid":"GO:0015487"}


id: PBO:0110842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lactate dehydrogenase regulator","termid":"PBO:0110842"}


id: GO:0060440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea formation","termid":"GO:0060440"}


id: PBO:0087660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of SEAC, a coatomer-related complex that associates dynamically with the vacuole; Npr3p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and leading to inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; null mutant has meiotic defects; human NPRL3 homolog","termid":"PBO:0087660"}


id: GO:0090513
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99998],"is_not":false,"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of L-histidine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane import into vacuole","termid":"GO:0034490"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"},{"relation_name":"is_a","term_name":"L-histidine transport","termid":"GO:1902024"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-histidine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090457"],"synonyms":[{"name":"histidine transmembrane import into vacuole","type":"broad"},{"name":"vacuolar histidine import","type":"broad"}],"termid":"GO:0090513","terms_by_termid":{"GO:0090513":null}}


id: PBO:0078348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 14-1","termid":"PBO:0078348"}


id: GO:0051928
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"positively_regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion transport","type":"narrow"},{"name":"positive regulation of calcium transport","type":"exact"},{"name":"stimulation of calcium ion transport","type":"narrow"},{"name":"up regulation of calcium ion transport","type":"exact"},{"name":"up-regulation of calcium ion transport","type":"exact"},{"name":"upregulation of calcium ion transport","type":"exact"}],"termid":"GO:0051928","terms_by_termid":{"GO:1905665":null}}


id: FYPO:0001564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular ornithine level","secondary_identifiers":["FYPO:0001618"],"synonyms":[{"name":"decreased cellular L-ornithine level","type":"exact"},{"name":"decreased cellular ornithine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular ornithine level during vegetative growth","type":"exact"},{"name":"decreased ornithine accumulation","type":"related"},{"name":"reduced cellular ornithine level","type":"exact"}],"termid":"FYPO:0001564"}


id: PBO:0052361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF9 antisense RNA 1","termid":"PBO:0052361"}


id: PBO:0072436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29","termid":"PBO:0072436"}


id: PBO:0042100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 171","termid":"PBO:0042100"}


id: PR:O14259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfp47 gene.","definition_xrefs":["UniProtKB:O14259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp4-interactor sfp47 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.02c","synonyms":[{"name":"Spom972h-sfp47","type":"exact"}],"termid":"PR:O14259"}


id: PBO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structurte updated","termid":"PBO:0016084"}


id: GO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stem cell factor","synonyms":[{"name":"response to KIT ligand","type":"exact"},{"name":"response to SCF","type":"exact"},{"name":"response to hematopoietic growth factor KL","type":"exact"},{"name":"response to stem cell factor stimulus","type":"exact"}],"termid":"GO:0036215"}


id: GO:0008941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 NO + 2 O2 + NAD(P)H + H+ = 2 nitrate + NAD(P)+.","definition_xrefs":["EC:1.14.12.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitric oxide dioxygenase NAD(P)H activity","secondary_identifiers":["Reactome:R-HSA-5340226","Reactome:R-HSA-1222723","MetaCyc:R621-RXN"],"synonyms":[{"name":"NOD activity","type":"related"},{"name":"nitric oxide dioxygenase activity","type":"broad"}],"termid":"GO:0008941"}


id: PBO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 9 (pseudogene)","termid":"PBO:0044722"}


id: PBO:0055921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A9, pseudogene","termid":"PBO:0055921"}


id: GO:0032625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-21 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-21 production","secondary_identifiers":["GO:0072619","GO:0042238"],"synonyms":[{"name":"IL-21 production","type":"exact"},{"name":"interleukin-21 biosynthetic process","type":"narrow"},{"name":"interleukin-21 secretion","type":"narrow"}],"termid":"GO:0032625"}


id: GO:0090524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5).","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome-b5 reductase activity, acting on NAD(P)H","termid":"GO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NADH","synonyms":[{"name":"cytochrome b5 reductase activity","type":"broad"}],"termid":"GO:0090524"}


id: PBO:0044547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein 3 pseudogene 1","termid":"PBO:0044547"}


id: PBO:0028444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028444"}


id: PBO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere localized protein Cnl2","termid":"PBO:0001052"}


id: PBO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis","termid":"PBO:0002343"}


id: PBO:0079404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 7 pseudogene","termid":"PBO:0079404"}


id: PBO:0051625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammation and lipid regulator with UBA-like and NBR1-like domains","termid":"PBO:0051625"}


id: FYPO:0006094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is abnormal.","definition_xrefs":["PomBase:mah","GO:0061572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin filament bundle assembly","synonyms":[{"name":"abnormal actin bundling","type":"exact"},{"name":"abnormal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006094"}


id: PBO:0089565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MIM complex subunit Mim2","termid":"PBO:0089565"}


id: GO:0097347
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterooligomeric protein complex that spans the bacterial periplasm and enables the secretion of adhesin proteins in Gram-negative bacteria. In Citrobacter rodentium, Salmonella enterica and Escherichia coli, the TAM complex consists of an Omp85-family protein, TamA, in the outer membrane and TamB in the inner membrane.","definition_xrefs":["GOC:am","PMID:22466966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TAM protein secretion complex","synonyms":[{"name":"translocation and assembly module protein complex","type":"exact"}],"termid":"GO:0097347"}


id: GO:0097044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone as a result of the detection of DNA damage within a cell.","definition_xrefs":["GOC:vw","PMID:18344406","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 acetylation in response to DNA damage (obsolete GO:0097044)","termid":"GO:0097044"}


id: PR:O74990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04646","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.13","secondary_identifiers":["UniProtKB:O74990"],"synonyms":[{"name":"COG complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG4","type":"exact"},{"name":"component of oligomeric Golgi complex 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74990"}


id: GO:2000213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"positively_regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of glutamate metabolic process","synonyms":[{"name":"positive regulation of glutamate metabolism","type":"exact"},{"name":"positive regulation of glutamic acid metabolic process","type":"exact"},{"name":"positive regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000213"}


id: PBO:0056254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis associated long intergenic non-coding RNA 1","termid":"PBO:0056254"}


id: FYPO:0008127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype where a ribosome is mislocalized to the nucleoplasm in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"ribosome mislocalized to nucleoplasm","termid":"FYPO:0008127"}


id: GO:0042987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of amyloid-beta, a glycoprotein associated with Alzheimer's disease.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloid precursor protein metabolic process","termid":"GO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid precursor protein catabolic process","synonyms":[{"name":"APP catabolic process","type":"exact"},{"name":"APP catabolism","type":"exact"},{"name":"amyloid precursor protein breakdown","type":"exact"},{"name":"amyloid precursor protein catabolism","type":"exact"},{"name":"amyloid precursor protein degradation","type":"exact"}],"termid":"GO:0042987"}


id: FYPO:0000818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of M-factor in growth medium","synonyms":[{"name":"increased accumulation of M-factor in growth medium","type":"related"},{"name":"increased level of M-factor in growth medium","type":"exact"},{"name":"increased release of M-factor into growth medium","type":"related"}],"termid":"FYPO:0000818"}


id: FYECO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which streptonigrin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ streptonigrin","termid":"FYECO:0000375"}


id: PBO:0089831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase","termid":"PBO:0089831"}


id: PBO:0064692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 28","termid":"PBO:0064692"}


id: PBO:0083376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 3' end of verified ORF SCW10/YMR305C","termid":"PBO:0083376"}


id: GO:0140684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri or a dimethyl-lysine residue at position 9 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:20531378","PMID:20208542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3K9 demethylase activity","termid":"GO:0032454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003824","GO:0032452","GO:0003674"],"is_obsolete":false,"name":"histone H3K9me2/H3K9me3 demethylase activity","secondary_identifiers":["EC:1.14.11.66","RHEA:60200"],"synonyms":[{"name":"histone H3-tri/dimethyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone H3K9me2 demethylase activity","type":"broad"},{"name":"histone H3K9me3 demethylase activity","type":"related"}],"termid":"GO:0140684"}


id: PBO:0044168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap binding complex dependent translation initiation factor","termid":"PBO:0044168"}


id: GO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete microsome (obsolete GO:0005792)","secondary_identifiers":["Wikipedia:Microsome"],"synonyms":[{"name":"microsomal membrane","type":"related"},{"name":"microsome","type":"exact"}],"termid":"GO:0005792"}


id: PR:000050251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PRO:DAN","PomBase:MAH","PMID:26960792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho2</GTP+","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"Spom-rho2/GTP+","type":"exact"},{"name":"rho2</GTP+","type":"exact"}],"termid":"PR:000050251"}


id: GO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cellular spore derived from the products of mitosis. A cellular spore is a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"},{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual sporulation resulting in formation of a cellular spore","synonyms":[{"name":"asexual reproduction resulting in the formation of a cellular spore","type":"exact"},{"name":"asexual sporulation resulting in the formation of a viable spore","type":"broad"}],"termid":"GO:0043936"}


id: PBO:0011146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase (predicted)","termid":"PBO:0011146"}


id: PBO:0083954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin small complex (gamma-TuSC) receptor; recruits the gamma-TuSC complex to the cytoplasmic side of the SPB, connecting nuclear microtubules to the SPB; involved in astral microtubule formation, stabilization, and with Stu2p, anchoring astral MTs at the cytoplasmic face of the SPB, and regulating plus-end MT dynamics; regulated by Cdc5 kinase","termid":"PBO:0083954"}


id: GO:0044603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenylyl-protein+ H2O = adenylate + protein; mediates the removal of an adenylyl (adenosine 5'-monophosphate; AMP group) from specific residues of target proteins.","definition_xrefs":["PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"protein adenylylhydrolase activity","synonyms":[{"name":"protein deAMPylase activity","type":"exact"},{"name":"protein deAMPylation activity","type":"exact"}],"termid":"GO:0044603"}


id: FYPO:0000594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of transposition is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased transposition","synonyms":[{"name":"increased transposable element transposition","type":"exact"},{"name":"increased transposition during mitotic cell cycle","type":"related"},{"name":"increased transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: increased","type":"related"}],"termid":"FYPO:0000594"}


id: GO:0033715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: inosine + O2 = 9-riburonosylhypoxanthine + 2 H2O; (1a) 2 inosine + O2 = 2 5'-dehydroinosine + 2 H2O, and (1b) 2 5'-dehydroinosine + O2 = 2 9-riburonosylhypoxanthine + 2 H2O.","definition_xrefs":["EC:1.1.3.28","RHEA:28651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nucleoside oxidase activity","secondary_identifiers":["MetaCyc:NUCLEOSIDE-OXIDASE-RXN"],"synonyms":[{"name":"nucleoside:oxygen 5'-oxidoreductase activity","type":"related"}],"termid":"GO:0033715"}


id: MOD:00158
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tryptophan residues by a carbon-carbon bond to form 4'-(L-tryptophan)-L-tryptophyl quinone.","definition_xrefs":["PubMed:2028257","RESID:AA0149","DeltaMass:0","ChEBI:20251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-(L-tryptophan)-L-tryptophyl quinone","synonyms":[{"name":"2,4-BisTrp-6,7-dione (from Tryptophan)","type":"exact"},{"name":"2-amino-3-[2-[2-amino-3-(2-carboxyethyl)-6,7-dioxo-1H-indol-4-yl]-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-4-(3-[(2S)-2-amino-2-carboxyethyl]-1H-indol-2-yl)-6,7-indolinedione","type":"exact"},{"name":"4'-tryptophan-tryptophylquinone","type":"exact"},{"name":"4-(2'-tryptophyl)tryptophan-6,7-dione","type":"exact"},{"name":"4-(L-tryptophan-2-yl)-L-tryptophyl quinone","type":"exact"},{"name":"CROSSLNK Tryptophan tryptophylquinone (Trp-Trp)","type":"exact"},{"name":"TTQ","type":"exact"},{"name":"XLNK-4'Trp-TrpQ","type":"exact"},{"name":"alpha,alpha'-diamino-6',7'-dihydro-6',7'-dioxo-(2,4'-bi-1H-indole)-3,3'-dipropanoic acid","type":"exact"}],"termid":"MOD:00158"}


id: PBO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 99 member A","termid":"PBO:0047036"}


id: PBO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDR subfamily","termid":"PBO:0001766"}


id: PR:Q9USY3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MAK10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04003","PANTHER:PTHR21373:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase, 35 NatC auxiliary subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.03","secondary_identifiers":["UniProtKB:Q9USY3"],"synonyms":[{"name":"N-terminal acetyltransferase C complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatC complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA35","type":"exact"}],"termid":"PR:Q9USY3"}


id: PBO:0079356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1c","termid":"PBO:0079356"}


id: GO:1905410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cohesin unloading","termid":"GO:1905343"},{"relation_name":"regulates","term_name":"mitotic cohesin unloading","termid":"GO:0061781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cohesin unloading","termid":"GO:1905410"}


id: PR:Q10223
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof14 gene.","definition_xrefs":["UniProtKB:Q10223","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.01","synonyms":[{"name":"Spom972h-pof14","type":"exact"}],"termid":"PR:Q10223"}


id: PBO:0086531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; not conserved in closely related Saccharomyces species; 26% of ORF overlaps the dubious ORF YDR524C-A; insertion mutation in a cdc34-2 mutant background causes altered bud morphology","termid":"PBO:0086531"}


id: GO:0046800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the severity of viral infection and subsequent disease.","definition_xrefs":["PMID:10587354"],"gene_count":0,"genotype_count":0,"name":"obsolete enhancement of virulence (obsolete GO:0046800)","synonyms":[{"name":"enhancement of virulence","type":"exact"}],"termid":"GO:0046800"}


id: GO:0120260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A set of four specialized microtubules that originates from the basal bodies and wraps around the ciliary pocket membrane, likely supporting its distinct flask shape.","definition_xrefs":["PMID:32518185","GOC:krc","DOI:10.5772/66859","GOC:ach","PMID:19299460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary microtubule quartet","synonyms":[{"name":"ciliary MtQ","type":"exact"}],"termid":"GO:0120260"}


id: PATO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being confined or restricted to multiple locations.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-localised","synonyms":[{"name":"multi-focal","type":"exact"}],"termid":"PATO:0001791"}


id: GO:0016938
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100044,104409],"is_not":false,"summary":null,"term":"GO:0016938"}]},"cv_name":"cellular_component","definition":"A complex of two kinesin heavy chains and two kinesin light chains.","direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"kinesin I complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016938","terms_by_termid":{"GO:0016938":null}}


id: GO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurine + 2-oxoglutarate = sulfoacetaldehyde + L-glutamate.","definition_xrefs":["RHEA:16353","PMID:16535664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"taurine-2-oxoglutarate transaminase activity","secondary_identifiers":["EC:2.6.1.55","MetaCyc:RXN-2301"],"synonyms":[{"name":"taurine aminotransferase activity","type":"exact"},{"name":"taurine transaminase activity","type":"exact"},{"name":"taurine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"taurine--glutamate transaminase activity","type":"related"},{"name":"taurine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0050322"}


id: PBO:0048590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 4 pseudogene","termid":"PBO:0048590"}


id: GO:2000053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:yaf","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000053)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000053"}


id: PBO:0066161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2-type and C3HC4-type zinc finger containing 1","termid":"PBO:0066161"}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4727"],"termid":"GO:0102689"}


id: GO:0002836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"regulation of response to tumor cell","termid":"GO:0002834"},{"relation_name":"positively_regulates","term_name":"response to tumor cell","termid":"GO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to tumor cell","synonyms":[{"name":"activation of response to tumor cell","type":"narrow"},{"name":"positive regulation of response to tumour cell","type":"exact"},{"name":"stimulation of response to tumor cell","type":"narrow"},{"name":"up regulation of response to tumor cell","type":"exact"},{"name":"up-regulation of response to tumor cell","type":"exact"},{"name":"upregulation of response to tumor cell","type":"exact"}],"termid":"GO:0002836"}


id: PBO:0084758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial membrane protein; coordinates expression of mitochondrially-encoded genes; may facilitate delivery of mRNA to membrane-bound translation machinery","termid":"PBO:0084758"}


id: GO:0033448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"AGG codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033448"}


id: PBO:0004481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroceramide delta-4 desaturase","termid":"PBO:0004481"}


id: GO:0180025
data:
  {"annotated_genes":["SJAG_04524","SJAG_01169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103786,109241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cytosolic small ribosomal subunit.","definition_xrefs":["PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal small subunit assembly","termid":"GO:0000028"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"cytosolic small ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180025","terms_by_termid":{"GO:0034462":null}}


id: PBO:0043691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5A","termid":"PBO:0043691"}


id: PR:Q9US02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC664.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US02"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.12c","synonyms":[{"name":"SDH assembly factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC664.12c","type":"exact"}],"termid":"PR:Q9US02"}


id: PATO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's having two or more hues or degrees of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-colored","synonyms":[{"name":"variegated","type":"exact"}],"termid":"PATO:0001533"}


id: PBO:0074175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 2","termid":"PBO:0074175"}


id: PBO:0061692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 like","termid":"PBO:0061692"}


id: GO:0061849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to telomeric G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures in telomeres.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GOC:nc","PMID:9512530","PMID:16142245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"},{"relation_name":"is_a","term_name":"G-quadruplex DNA binding","termid":"GO:0051880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"telomeric G-quadruplex DNA binding","termid":"GO:0061849"}


id: PR:G2TRV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf8 gene.","definition_xrefs":["UniProtKB:G2TRV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.10","synonyms":[{"name":"Spom972h-wtf8","type":"exact"}],"termid":"PR:G2TRV0"}


id: PBO:0056383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 13","termid":"PBO:0056383"}


id: PBO:0067622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 794, pseudogene","termid":"PBO:0067622"}


id: PBO:0078007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 6 pseudogene 1","termid":"PBO:0078007"}


id: PBO:0061650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21 pseudogene 1","termid":"PBO:0061650"}


id: MOD:00268
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-3',4',5'-trihydroxyphenylalanine.","definition_xrefs":["PubMed:9434739","DeltaMass:0","PubMed:12686488","RESID:AA0263","PubMed:12771378","PubMed:8554314","PubMed:9252331","Unimod:425#Y","ChEBI:141811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated tyrosine","termid":"MOD:00707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3',4',5'-trihydroxyphenylalanine","synonyms":[{"name":"(S)-2-amino-3-(3,4,5-trihydroxyphenyl)propanoic acid","type":"exact"},{"name":"3,4,6-Trihydroxy-Phenylalanine (from Tyrosine) (TOPA)","type":"exact"},{"name":"35Hy2Tyr","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-3',4',5'-trihydroxyphenylalanine","type":"exact"},{"name":"L-3,4,5-TOPA","type":"exact"},{"name":"MOD_RES 3',4',5'-trihydroxyphenylalanine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00268"}


id: PBO:0058233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4522","termid":"PBO:0058233"}


id: PATO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"growth rate","termid":"PATO:0001492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrophic growth","termid":"PATO:0001494"}


id: PBO:0003812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop8 (predicted)","termid":"PBO:0003812"}


id: RO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_on_by","termid":"RO:0008508"}


id: PATO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a sound wave by virtue of the maximum magnitude (value without regard to sign) of its disturbance.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amplitude","termid":"PATO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound amplitude","synonyms":[{"name":"loudness","type":"broad"}],"termid":"PATO:0001521"}


id: PBO:0070623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 7","termid":"PBO:0070623"}


id: PR:O74564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.11c","synonyms":[{"name":"Spom972h-wtf9","type":"exact"}],"termid":"PR:O74564"}


id: GO:1904492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Ac-Asp-Glu.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:24863754","GOC:hal","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"oligopeptide binding","termid":"GO:1900750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Ac-Asp-Glu binding","termid":"GO:1904492"}


id: PBO:0048212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit pi","termid":"PBO:0048212"}


id: GO:0032465
data:
  {"annotated_genes":["SJAG_03508","SJAG_05290","SJAG_03681","SJAG_01805","SJAG_01114","SJAG_03048","SJAG_00845","SJAG_02169","SJAG_00514","SJAG_01837","SJAG_00078","SJAG_03887","SJAG_01386","SJAG_02514","SJAG_00229","SJAG_02392","SJAG_04412","SJAG_01790","SJAG_01456","SJAG_00082","SJAG_03353","SJAG_06270","SJAG_03592","SJAG_04468","SJAG_04776","SJAG_01863","SJAG_03342","SJAG_00883","SJAG_04455","SJAG_04597","SJAG_02838","SJAG_03631","SJAG_04666","SJAG_02592","SJAG_04551","SJAG_00526","SJAG_03704","SJAG_02807","SJAG_03692","SJAG_03309","SJAG_00256","SJAG_03581","SJAG_02380","SJAG_01188","SJAG_04943","SJAG_01787","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98303,98526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[89018,89638,91820,87904,95821,95740,97429,103394,86922,103705,89099,101187,106342,112052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90584,86201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[83761,106692,109531,90585,90752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[89983,86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[115641,92030,99863,86964,106935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[109532,101328,111612,102534,114007,103205,85447,89984,86070,88597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[83762,90588,88598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[89990,90550,115694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[114801,99652,105381,109534,111613,86016,113643,86207,112830,83764,86165,88016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902412"},{"annotations":[84084,97541,107538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[114008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01456":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_02169":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02807":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03692":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03936":null,"SJAG_04412":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokinesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"secondary_identifiers":["GO:0071775"],"synonyms":[{"name":"regulation of cell cycle cytokinesis","type":"exact"}],"termid":"GO:0032465","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:2001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltopentaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"maltopentaose transport","termid":"GO:2001101"}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: GO:0021797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain anterior/posterior pattern specification","synonyms":[{"name":"forebrain anterior-posterior pattern specification","type":"exact"}],"termid":"GO:0021797"}


id: PBO:0075998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP4 metalloreductase","termid":"PBO:0075998"}


id: PBO:0068825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 63, pseudogene","termid":"PBO:0068825"}


id: GO:0060334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of type II interferon-mediated signaling pathway","synonyms":[{"name":"regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"regulation of immune interferon signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"regulation of type II IFN-mediated signaling pathway","type":"broad"}],"termid":"GO:0060334"}


id: PBO:0059348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S14","termid":"PBO:0059348"}


id: GO:0097390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 12 (CXCL12) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 12 production","synonyms":[{"name":"CXCL12 production","type":"exact"}],"termid":"GO:0097390"}


id: GO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuromedin B receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neuromedin B receptor binding","synonyms":[{"name":"neuromedin B receptor ligand","type":"narrow"}],"termid":"GO:0031710"}


id: PBO:0064899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'delta","termid":"PBO:0064899"}


id: PBO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 divergent transcript","termid":"PBO:0045805"}


id: PBO:0041179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A1","termid":"PBO:0041179"}


id: FYPO:0001438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tetracycline.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on tetracycline","synonyms":[{"name":"normal cell population growth in presence of tetracycline","type":"exact"},{"name":"normal cell population growth on tetracycline","type":"exact"},{"name":"normal cellular response to tetracycline","type":"related"},{"name":"normal vegetative cell population growth on tetracycline","type":"exact"}],"termid":"FYPO:0001438"}


id: FYPO:0003627
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"protein localization phenotype","termid":"FYPO:0002333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01143":null},"genotype_count":1,"genotypes_by_uniquename":{"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular protein localisation","type":"exact"},{"name":"normal cellular protein localization","type":"exact"},{"name":"normal protein localisation","type":"exact"}],"termid":"FYPO:0003627","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000644":null}}


id: PBO:0034655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034655"}


id: GO:0006310
data:
  {"annotated_genes":["SJAG_00995","SJAG_03048","SJAG_01138","SJAG_00935","SJAG_05239","SJAG_01419","SJAG_04995","SJAG_00696","SJAG_02079","SJAG_03160","SJAG_04372","SJAG_01652","SJAG_02311","SJAG_03219","SJAG_00213","SJAG_00796","SJAG_03855","SJAG_00153","SJAG_00327","SJAG_03898","SJAG_02652","SJAG_05280","SJAG_00172","SJAG_05333","SJAG_01601","SJAG_03068","SJAG_04816","SJAG_03097","SJAG_03699","SJAG_00823","SJAG_02828","SJAG_02575","SJAG_01173","SJAG_00623","SJAG_02299","SJAG_MIT07","SJAG_01495","SJAG_03051","SJAG_01332","SJAG_05373","SJAG_04530","SJAG_01624","SJAG_03026","SJAG_02616","SJAG_05180","SJAG_02708","SJAG_05232","SJAG_05105","SJAG_01076","SJAG_05295","SJAG_01221","SJAG_03438","SJAG_04150","SJAG_02690","SJAG_04210","SJAG_03751","SJAG_02294","SJAG_03454","SJAG_05353","SJAG_00805","SJAG_00727","SJAG_01573","SJAG_03221","SJAG_01698","SJAG_04950","SJAG_02490","SJAG_01044","SJAG_01832","SJAG_03525","SJAG_04183","SJAG_03702","SJAG_03926","SJAG_04039","SJAG_02592","SJAG_02348","SJAG_02181","SJAG_01354","SJAG_00884","SJAG_01677","SJAG_05237","SJAG_02556","SJAG_02465","SJAG_04303","SJAG_02339","SJAG_00100","SJAG_04971","SJAG_07002","SJAG_05323","SJAG_00475","SJAG_01762","SJAG_00177","SJAG_03720","SJAG_01067","SJAG_03780","SJAG_00857","SJAG_02460","SJAG_00640","SJAG_00908","SJAG_01410","SJAG_03994","SJAG_03728","SJAG_02267","SJAG_03941","SJAG_01776","SJAG_00757","SJAG_03722","SJAG_00266","SJAG_01708","SJAG_04932","SJAG_06597","SJAG_03567","SJAG_00980","SJAG_04147","SJAG_04748","SJAG_05173","SJAG_01156","SJAG_01401","SJAG_MIT06","SJAG_04205","SJAG_02545","SJAG_06642","SJAG_02724","SJAG_00198","SJAG_01205","SJAG_02822","SJAG_MIT05","SJAG_02226","SJAG_03436","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85495,88735,95218,97776,103826,105251,106134,106466,107110,108682,108992,113205],"is_not":false,"summary":null,"term":"GO:0006310"},{"annotations":[104131],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[95217,98350,103825,96694,92342,106465,88850],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[96793],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000732"},{"annotations":[96695,106467,88851,93090,95219,103827],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042148"},{"annotations":[95220,84764,103828,85369,112945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[109650,106390,88135,95439,86638,108067,108196,111256,113234,102574,95580,111426,103407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000727"},{"annotations":[113707,106468,107651,88704,103105,85370,95532,100027,102453,103566,89415,92343,84765,92857,103829,107891,111666,96759,100310,112404,93272,84270,95221,88852,97323,98351,113235,85260,114864,113368,102575,112946,87059,95463,107712,86406,92188,113978,99359,85954,105252,93091,107406,101887,103916,113836,69846,92474,84617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000724"},{"annotations":[96794,85496,104311,113569,88826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045003"},{"annotations":[114867,84159,93600,92345,85372,104679,106469,95284,106989,112948,96730,102220,102789,111170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[100574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035825"},{"annotations":[115144,115145,115137,115136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006314"},{"annotations":[86538,105824,104914,107289,101025],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[93092],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[106471,103830],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[85497,96696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[84704,106472,97676,89053,93093,96697,103831,113236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[96795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"},{"annotations":[106473,103832,95223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000708"},{"annotations":[84705,89054,96698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[84768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097552"},{"annotations":[88853,96699,103921,100028,95224,98353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006312"},{"annotations":[104134],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[98535,104522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[88349],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045951"},{"annotations":[85269],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[86998,103834,100029,104137,100998,114871,85797,88854,107290,85270,86539,85498,93094,96797,100483,101026,111679,87649,113240,90919,96700,97678,89416,84771,86490,88931,102884,96733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007131"},{"annotations":[100577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[99361,107749,96798,95226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036298"},{"annotations":[93666,92193,98488,100030,86999,104721,94421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000725"},{"annotations":[105254,106494],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0000018"},{"annotations":[105492],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010569"},{"annotations":[112436,90551,85376],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[92410,74246,86257,113014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990414"},{"annotations":[97680,104313,113242,113424,102347,105256,106495,113572,114872],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[92195],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071140"},{"annotations":[112388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"},{"annotations":[88906,85380,109110,88908,88909,92351,109113,109109,109111,109112,88907,107898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":129,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00153":null,"SJAG_00172":null,"SJAG_00177":null,"SJAG_00198":null,"SJAG_00213":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00327":null,"SJAG_00475":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_00696":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00796":null,"SJAG_00805":null,"SJAG_00823":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_00995":null,"SJAG_01044":null,"SJAG_01067":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01173":null,"SJAG_01205":null,"SJAG_01221":null,"SJAG_01332":null,"SJAG_01354":null,"SJAG_01401":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01573":null,"SJAG_01601":null,"SJAG_01624":null,"SJAG_01652":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01776":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02181":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02299":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02348":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02575":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03051":null,"SJAG_03068":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03436":null,"SJAG_03438":null,"SJAG_03454":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03699":null,"SJAG_03702":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03728":null,"SJAG_03751":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03926":null,"SJAG_03941":null,"SJAG_03994":null,"SJAG_04039":null,"SJAG_04147":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04205":null,"SJAG_04210":null,"SJAG_04303":null,"SJAG_04372":null,"SJAG_04530":null,"SJAG_04748":null,"SJAG_04816":null,"SJAG_04932":null,"SJAG_04950":null,"SJAG_04971":null,"SJAG_04995":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05180":null,"SJAG_05232":null,"SJAG_05237":null,"SJAG_05239":null,"SJAG_05280":null,"SJAG_05295":null,"SJAG_05323":null,"SJAG_05333":null,"SJAG_05353":null,"SJAG_05373":null,"SJAG_06597":null,"SJAG_06642":null,"SJAG_07002":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006310","terms_by_termid":{"GO:0000018":null,"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000712":null,"GO:0000722":null,"GO:0000724":null,"GO:0000725":null,"GO:0000727":null,"GO:0000730":null,"GO:0000732":null,"GO:0006310":null,"GO:0006311":null,"GO:0006312":null,"GO:0006314":null,"GO:0007131":null,"GO:0007534":null,"GO:0010520":null,"GO:0010569":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0035825":null,"GO:0036298":null,"GO:0042148":null,"GO:0045003":null,"GO:0045128":null,"GO:0045458":null,"GO:0045951":null,"GO:0062209":null,"GO:0071140":null,"GO:0097552":null,"GO:1902346":null,"GO:1905263":null,"GO:1990414":null,"GO:1990918":null}}


id: PBO:0042785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 131","termid":"PBO:0042785"}


id: GO:0140874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paraherquonin, a meroterpenoid with a unique, highly congested hexacyclic molecular architecture.","definition_xrefs":["PMID:27602587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"paraherquonin biosynthetic process","synonyms":[{"name":"paraherquonin anabolism","type":"exact"},{"name":"paraherquonin biosynthesis","type":"exact"},{"name":"paraherquonin formation","type":"exact"},{"name":"paraherquonin synthesis","type":"exact"}],"termid":"GO:0140874"}


id: PBO:0040615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1","termid":"PBO:0040615"}


id: GO:1903588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["PMID:23388056","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell proliferation","termid":"GO:0001937"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"down regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"downregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"downregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"inhibition of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"inhibition of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"negative regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:1903588"}


id: GO:0000977
data:
  {"annotated_genes":["SJAG_05006","SJAG_02569","SJAG_02691","SJAG_03622","SJAG_02252","SJAG_01532","SJAG_01740","SJAG_03879","SJAG_00802","SJAG_03473","SJAG_05343","SJAG_02311","SJAG_02810","SJAG_04249","SJAG_02048","SJAG_05153","SJAG_04191","SJAG_02149","SJAG_03735","SJAG_01157","SJAG_06599","SJAG_04388","SJAG_00792","SJAG_00664","SJAG_04839","SJAG_01441","SJAG_00861","SJAG_05337","SJAG_04749","SJAG_02730","SJAG_03388","SJAG_03484","SJAG_05288","SJAG_03918","SJAG_00266","SJAG_03241","SJAG_00698","SJAG_02709","SJAG_04421","SJAG_03538","SJAG_02138","SJAG_03911","SJAG_04855","SJAG_04712","SJAG_01725","SJAG_02406","SJAG_02218","SJAG_00210","SJAG_04584","SJAG_04092","SJAG_00421","SJAG_02938","SJAG_01307","SJAG_03183","SJAG_04813","SJAG_00163","SJAG_02052","SJAG_00386","SJAG_03346","SJAG_02752","SJAG_05247","SJAG_00304","SJAG_04009","SJAG_01243","SJAG_01343","SJAG_00693","SJAG_02472","SJAG_00987","SJAG_01930","SJAG_01916","SJAG_03143","SJAG_01707","SJAG_06576","SJAG_04036","SJAG_01583","SJAG_00124","SJAG_01694","SJAG_00926","SJAG_00037","SJAG_03519","SJAG_01062","SJAG_02956","SJAG_02326","SJAG_00979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85005,88821,98391,111777,114050,114179],"is_not":false,"summary":null,"term":"GO:0000977"},{"annotations":[107053,104805,88647,92221,112761,94597,102523,93235,95957,108093,77245,93703,88938,98206,102888,107069,106899,84626,85668,96650,98390,103160,107228,109576,112229,85249,93552,93704,98855,89894,108052,88092,102408,105359,108092,93702,90251,84259,112623,114458,107037,93705,110247,84682,93701,104144,83822,94287,95656,98439,92456,97645,114178,103214,104392,110986,89472,84188,100935,104977,92753,109854,96276,79352,103745,93475,100600,100605,101992,86300,90914,93104,105221,110737,105358,113614,105869,102266,91875,99718,90897,105529,89412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[104978,103215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[108053,91761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[103746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":84,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01707":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02691":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0000976","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001012"],"synonyms":[{"name":"RNA polymerase II regulatory region DNA binding","type":"related"}],"termid":"GO:0000977","terms_by_termid":{"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0001162":null,"GO:0044377":null}}


id: MOD:00172
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-alanyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0163","PubMed:7682556","PubMed:7744038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alanyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIAla","type":"exact"},{"name":"LIPID GPI-anchor amidated alanine","type":"exact"},{"name":"N-alanyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00172"}


id: PBO:0091303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing of all introns, including intron IV, introduces stop codon that leads to production of mitochondrial hydrolase instead of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091303"}


id: PBO:0078862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 10","termid":"PBO:0078862"}


id: PBO:0063188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor cilium actin regulator","termid":"PBO:0063188"}


id: RO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_overlaps","termid":"RO:0002490"},{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"RO:0002497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","termid":"RO:0002492"}


id: FYPO:0005618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of repair of double-strand breaks formed as part of meiotic recombination is longer than normal.","definition_xrefs":["PMID:18378696","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased duration of meiotic recombination double-strand break repair","synonyms":[{"name":"increased duration of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair during meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"prolonged meiotic recombination double-strand break repair","type":"exact"}],"termid":"FYPO:0005618"}


id: PBO:0090077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate aminotransferase Caa1","termid":"PBO:0090077"}


id: GO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of epinephrine uptake","termid":"GO:0051627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of epinephrine uptake","synonyms":[{"name":"inhibition of adrenaline uptake","type":"exact"},{"name":"inhibition of epinephrine import","type":"exact"}],"termid":"GO:0051629"}


id: GO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TPR domain binding","synonyms":[{"name":"tetratricopeptide repeat domain binding","type":"exact"}],"termid":"GO:0030911"}


id: PBO:0071289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 12","termid":"PBO:0071289"}


id: PBO:0082048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-O-ribose methyltransferase; methylates the 2'-O-ribose of tRNA-Phe, tRNA-Trp, and tRNA-Leu at positions C32 and N34 of tRNA anticodon loop; crucial biological role likely modification of tRNA-Phe; interacts with Trm732p and Rtt10p in 2'-O-methylation of C32 and N34 substrate tRNAs, respectively; yeast null mutant can be functionally complemented by human FTSJ1, mutations in which have been implicated in nonsyndromic X-linked intellectual disability (NSXLID)","termid":"PBO:0082048"}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: FYPO:0000804
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115683,115561,115676,115681],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115661],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115586,115534,115542,115535,115585,115579,115562,115578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115274,115283,115271,115272,115286],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"},{"annotations":[115277,115270,115282,115285,115269,115273],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115325],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endomembrane system organization is abnormal. Endomembrane system organization results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system, which encompasses the endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope.","definition_xrefs":["PomBase:mah","GO:0012505","GO:0010256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":17,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal endomembrane system organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_00426","SJAG_04464","SJAG_03891","SJAG_01745","SJAG_05207","SJAG_01906","SJAG_01242","SJAG_03449","SJAG_03892","SJAG_03940","SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","alx1delta","cmp7delta","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","vps4delta","lem2delta","ned1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","nem1delta","vps32delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal endomembrane system organisation","type":"exact"},{"name":"abnormal endomembrane system organization during mitotic cell cycle","type":"related"},{"name":"abnormal endomembrane system organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000804","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006433":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: FYPO:0002654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which exocytic vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"enlarged exocytic vesicles","synonyms":[{"name":"enlarged exocytic vesicles during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles during vegetative growth","type":"exact"}],"termid":"FYPO:0002654"}


id: FYPO:0007037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phenylglyoxal. Cells stop growing (and may die) at a concentration of phenylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phenylglyoxal","synonyms":[{"name":"hypersensitive to phenylglyoxal","type":"exact"},{"name":"sensitive to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"sensitive to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to phenylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0007037"}


id: PBO:0040827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 2","termid":"PBO:0040827"}


id: GO:1904291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic DNA damage checkpoint.","definition_xrefs":["GOC:TermGenie","PMID:16549501","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA damage checkpoint","termid":"GO:1904289"},{"relation_name":"is_a","term_name":"positive regulation of DNA damage checkpoint","termid":"GO:2000003"},{"relation_name":"positively_regulates","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of mitotic DNA damage checkpoint","synonyms":[{"name":"activation of mitotic DNA damage checkpoint","type":"narrow"},{"name":"up regulation of mitotic DNA damage checkpoint","type":"exact"},{"name":"up-regulation of mitotic DNA damage checkpoint","type":"exact"},{"name":"upregulation of mitotic DNA damage checkpoint","type":"exact"}],"termid":"GO:1904291"}


id: FYPO:0002303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"},{"relation_name":"output_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000004","FYPO:0000337","FYPO:0001985"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"inviable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division","type":"related"},{"name":"inviable with septation independent of mitosis","type":"related"},{"name":"inviable with septation without nuclear division","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002303"}


id: PBO:0030114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_processing","termid":"PBO:0030114"}


id: PBO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 35","termid":"PBO:0052522"}


id: PBO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein NIFK (predicted)","termid":"PBO:0005847"}


id: GO:0050081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maltose 6'-phosphate = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["EC:3.2.1.122","MetaCyc:MALTOSE-6-PHOSPHATE-GLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"maltose-6'-phosphate glucosidase activity","secondary_identifiers":["RHEA:20421"],"synonyms":[{"name":"maltose-6'-phosphate 6-phosphoglucohydrolase activity","type":"related"},{"name":"phospho-alpha-glucosidase activity","type":"related"}],"termid":"GO:0050081"}


id: PBO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AZ member 1 pseudogene","termid":"PBO:0062227"}


id: PBO:0038455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis associated transcript in bladder cancer","termid":"PBO:0038455"}


id: GO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-acetyl-2-L-amino-6-oxoheptanedioate + L-glutamate.","definition_xrefs":["PMID:1906065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"acetyldiaminopimelate aminotransferase activity","synonyms":[{"name":"N-acetyl-L,L-diaminopimelate aminotransferase activity","type":"exact"},{"name":"N-acetyl-diaminopimelate aminotransferase activity","type":"exact"}],"termid":"GO:0043760"}


id: FYPO:0004478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the mitochondrion is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to mitochondrion","synonyms":[{"name":"ectopic protein localization to mitochondrion","type":"exact"},{"name":"protein mislocalised to mitochondrion","type":"exact"},{"name":"protein mislocalised to mitochondrion during vegetative growth","type":"exact"},{"name":"protein mislocalized to mitochondrion during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0004478"}


id: MOD:01867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["Unimod:888#Y","OMSSA:210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on Y","type":"exact"}],"termid":"MOD:01867"}


