# terms

id: GO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell in response to an external stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15814331","PMID:16056255","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"dendritic cell migration","termid":"GO:0036336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell chemotaxis","termid":"GO:0002407"}


id: GO:1904845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23185570","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-glutamine","termid":"GO:1904844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-glutamine","termid":"GO:1904845"}


id: GO:1905188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of meiosis I.","definition_xrefs":["GOC:TermGenie","PMID:21389117","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902104"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis I","termid":"GO:1905186"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of meiosis I","termid":"GO:1990949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of meiosis I","synonyms":[{"name":"positive regulation of meiosis I metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905188"}


id: PBO:0076073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 related adaptor beta","termid":"PBO:0076073"}


id: PR:O94272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-aminobutyric acid receptor-associated protein-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03808","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.24c","secondary_identifiers":["UniProtKB:O94272"],"synonyms":[{"name":"Spom972h-GABARAPL2","type":"exact"},{"name":"autophagy-related ubiquitin-like modifier atg8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94272"}


id: PBO:0043899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 3","termid":"PBO:0043899"}


id: FYPO:0002054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to hydroxyurea. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to hydroxyurea (obsolete FYPO:0002054)","synonyms":[{"name":"cut during cellular response to HU","type":"exact"},{"name":"cut during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002054"}


id: GO:0035174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a serine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine kinase activity (obsolete GO:0035174)","synonyms":[{"name":"histone-serine kinase activity","type":"exact"}],"termid":"GO:0035174"}


id: PR:Q12706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q12706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase psk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.08","synonyms":[{"name":"Spom972h-psk1","type":"exact"}],"termid":"PR:Q12706"}


id: PBO:0017070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, double strand break localizing Dbl1","termid":"PBO:0017070"}


id: PBO:0041574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 58","termid":"PBO:0041574"}


id: PBO:0069878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1165, pseudogene","termid":"PBO:0069878"}


id: GO:0014893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rest stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rest involved in regulation of muscle adaptation","termid":"GO:0014893"}


id: PBO:0085653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial fission and peroxisome abundance; may have a distinct role in tethering protein aggregates to mitochondria in order to retain them in the mother cell; required for localization of Dnm1p and Mdv1p during mitochondrial division; mediates ethanol-induced apoptosis and ethanol-induced mitochondrial fragmentation","termid":"PBO:0085653"}


id: PBO:0069288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 544, pseudogene","termid":"PBO:0069288"}


id: PBO:0066050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap1 GTPase-GDP dissociation stimulator 1","termid":"PBO:0066050"}


id: PBO:0015216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, ubiquitin-protein ligase E3","termid":"PBO:0015216"}


id: PBO:0049882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 1","termid":"PBO:0049882"}


id: PBO:0079269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39B","termid":"PBO:0079269"}


id: PBO:0055820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPP antisense RNA 2","termid":"PBO:0055820"}


id: PBO:0072829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SANT and BTB domain regulator of CSR","termid":"PBO:0072829"}


id: PBO:0038731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 2, smooth muscle","termid":"PBO:0038731"}


id: GO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271).","definition_xrefs":["PMID:11030750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-L-fucose biosynthetic process","termid":"GO:0042350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' GDP-L-fucose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-66"],"synonyms":[{"name":"'de novo' GDP-L-fucose anabolism","type":"exact"},{"name":"'de novo' GDP-L-fucose biosynthesis","type":"exact"},{"name":"'de novo' GDP-L-fucose formation","type":"exact"},{"name":"'de novo' GDP-L-fucose synthesis","type":"exact"},{"name":"GDP-L-fucose biosynthesis, de novo pathway","type":"exact"},{"name":"GDP-L-fucose biosynthetic process, de novo pathway","type":"exact"}],"termid":"GO:0042351"}


id: PBO:0073240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 4","termid":"PBO:0073240"}


id: PBO:0064433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase","termid":"PBO:0064433"}


id: GO:0050363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + NAD(P)+ = (indol-3-yl)pyruvate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.19","MetaCyc:TRYPTOPHAN-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tryptophan dehydrogenase activity","synonyms":[{"name":"L-Trp-dehydrogenase activity","type":"related"},{"name":"L-tryptophan dehydrogenase activity","type":"related"},{"name":"L-tryptophan:NAD(P)+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD(P)+-L-tryptophan dehydrogenase activity","type":"related"},{"name":"TDH","type":"related"},{"name":"TrpDH activity","type":"related"}],"termid":"GO:0050363"}


id: FYPO:0005322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which anaphase-promoting complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal anaphase-promoting complex assembly","synonyms":[{"name":"normal APC assembly","type":"exact"},{"name":"normal anaphase-promoting complex assembly during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005322"}


id: GO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a nitrogenous group, other than amino, amidino or oxime, from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transferase activity, transferring other nitrogenous groups (obsolete GO:0016771)","synonyms":[{"name":"transferase activity, transferring other nitrogenous groups","type":"exact"}],"termid":"GO:0016771"}


id: GO:0018448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymethylmethylsilanediol + O2 + 2 H+ + 2 e- = formylmethylsilanediol + 2 H2O.","definition_xrefs":["UM-BBD_reactionID:r0638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylmethylsilanediol oxidase activity","termid":"GO:0018448"}


id: PBO:0027961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_polymerase_II_core_promoter_proximal_region_sequence-specific_DNA_binding","termid":"PBO:0027961"}


id: PBO:0087078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L39; required for ribosome biogenesis; loss of both Rpl31p and Rpl39p confers lethality; also exhibits genetic interactions with SIS1 and PAB1; homologous to mammalian ribosomal protein L39, no bacterial homolog","termid":"PBO:0087078"}


id: PBO:0088712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk32","termid":"PBO:0088712"}


id: PBO:0045992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 6","termid":"PBO:0045992"}


id: PBO:0065684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTTG1 interacting protein","termid":"PBO:0065684"}


id: PBO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_replication","termid":"PBO:0031217"}


id: FYPO:0005776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing v.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on acetaldehyde","synonyms":[{"name":"normal cell population growth in presence of acetaldehyde","type":"exact"},{"name":"normal cell population growth on acetaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on acetaldehyde","type":"exact"}],"termid":"FYPO:0005776"}


id: GO:0033331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-kaur-16-ene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["GOC:mah","PMID:17064690","MetaCyc:PWY-5032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-kaurene metabolic process","synonyms":[{"name":"ent-kaurene metabolism","type":"exact"}],"termid":"GO:0033331"}


id: GO:1903472
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99860],"is_not":false,"summary":null,"term":"GO:1903472"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","PMID:1234","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cytokinetic process","termid":"GO:1903437"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring contraction","termid":"GO:1903471"},{"relation_name":"negatively_regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"negative regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"down-regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"downregulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"inhibition of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of mitotic actomyosin contractile ring contraction","type":"narrow"},{"name":"negative regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1903472","terms_by_termid":{"GO:1903472":null}}


id: PBO:0111855
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U-box domain","termid":"PBO:0111855"}


id: PBO:0069566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 838, pseudogene","termid":"PBO:0069566"}


id: PR:P10651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P10651","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.3 (Schizosaccharomyces pombe)","termid":"PR:000027596"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom972h-hht3","type":"exact"}],"termid":"PR:P10651"}


id: PBO:0068421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding region (RNP1, RRM) containing 3 pseudogene 1","termid":"PBO:0068421"}


id: PBO:0078498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-1","termid":"PBO:0078498"}


id: PBO:0063497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 5","termid":"PBO:0063497"}


id: GO:0048081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cuticle pigmentation","synonyms":[{"name":"activation of cuticle pigmentation","type":"narrow"},{"name":"stimulation of cuticle pigmentation","type":"narrow"},{"name":"up regulation of cuticle pigmentation","type":"exact"},{"name":"up-regulation of cuticle pigmentation","type":"exact"},{"name":"upregulation of cuticle pigmentation","type":"exact"}],"termid":"GO:0048081"}


id: PBO:0091018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase Ryh1","termid":"PBO:0091018"}


id: PBO:0045768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI2 divergent transcript","termid":"PBO:0045768"}


id: PBO:0079618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L3","termid":"PBO:0079618"}


id: PBO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 divergent transcript","termid":"PBO:0042974"}


id: GO:0015926
data:
  {"annotated_genes":["SJAG_02446","SJAG_02192","SJAG_02590","SJAG_03824","SJAG_02718","SJAG_02649","SJAG_05001","SJAG_03280","SJAG_04363","SJAG_02076","SJAG_01017","SJAG_02131","SJAG_00667","SJAG_03444","SJAG_03646","SJAG_04301","SJAG_02478","SJAG_03295","SJAG_01171","SJAG_01888"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86796,90390],"is_not":false,"summary":null,"term":"GO:0015926"},{"annotations":[92285,83855,83605,83856,92286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090599"},{"annotations":[83678,104560,111767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008422"},{"annotations":[83607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106407"},{"annotations":[95936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004573"},{"annotations":[99464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004339"},{"annotations":[85303,107480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051118"},{"annotations":[91279,90205,96299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[98108,104236,98109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[98111,98110,91280,104237,84509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"},{"annotations":[97756,97755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032450"},{"annotations":[97758,97757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044654"},{"annotations":[112277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosyl compounds, substances containing a group derived from a cyclic form of glucose or a glucose derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02478":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_03280":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04363":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015926","terms_by_termid":{"GO:0004338":null,"GO:0004339":null,"GO:0004573":null,"GO:0004575":null,"GO:0008422":null,"GO:0015926":null,"GO:0032450":null,"GO:0042973":null,"GO:0044654":null,"GO:0046557":null,"GO:0051118":null,"GO:0090599":null,"GO:0106407":null}}


id: PBO:0088404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNP complex","termid":"PBO:0088404"}


id: PBO:0047681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLNC antisense RNA 1","termid":"PBO:0047681"}


id: PBO:0083552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene CSE1","termid":"PBO:0083552"}


id: GO:0004410
data:
  {"annotated_genes":["SJAG_04688"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98087],"is_not":false,"summary":null,"term":"GO:0004410"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + acetyl-CoA + H2O = CoA + H+ + homocitrate.","definition_xrefs":["RHEA:12929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"homocitrate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00271","MetaCyc:HOMOCITRATE-SYNTHASE-RXN","EC:2.3.3.14"],"synonyms":[{"name":"2-hydroxybutane-1,2,4-tricarboxylate 2-oxoglutarate-lyase (CoA- acetylating) activity","type":"related"},{"name":"2-hydroxybutane-1,2,4-tricarboxylate 2-oxoglutarate-lyase (CoA-acetylating)","type":"related"},{"name":"acetyl-CoA:2-oxoglutarate C-acetyltransferase (thioester-hydrolysing, carboxymethyl forming)","type":"related"},{"name":"acetyl-coenzyme A:2-ketoglutarate C-acetyl transferase activity","type":"related"},{"name":"homocitrate synthetase activity","type":"related"}],"termid":"GO:0004410","terms_by_termid":{"GO:0004410":null}}


id: GO:0060970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the areas along the dorsal/ventral axis of the embryonic heart tube are established. This process will determine the patterns of cell differentiation along the axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube dorsal/ventral pattern formation","termid":"GO:0060970"}


id: GO:0032535
data:
  {"annotated_genes":["SJAG_01993","SJAG_04479","SJAG_03401","SJAG_02532","SJAG_01805","SJAG_03086","SJAG_01943","SJAG_04332","SJAG_04982","SJAG_00279","SJAG_04703","SJAG_02019","SJAG_00409","SJAG_04668","SJAG_02700","SJAG_01894","SJAG_00521","SJAG_02566","SJAG_04100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114748,95059,88688,110477,84482,88503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[91862,101848,110091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[102653,88584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[89981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[97908,98898,101315,86029,86874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[90716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[93897,110480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"A process that modulates the size of a cellular component.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00409":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03401":null,"SJAG_04100":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular component size","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032535","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0042989":null,"GO:0045793":null,"GO:0051016":null}}


id: PBO:0017531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0017531"}


id: GO:0120182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of focal adhesion disassembly","termid":"GO:0120182"}


id: PBO:0080989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 5","termid":"PBO:0080989"}


id: PBO:0003508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin (predicted)","termid":"PBO:0003508"}


id: PBO:0053611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 645","termid":"PBO:0053611"}


id: PBO:0061270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 1","termid":"PBO:0061270"}


id: PBO:0053014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 1","termid":"PBO:0053014"}


id: PBO:0060402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 10, NatA catalytic subunit","termid":"PBO:0060402"}


id: GO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to increased oxygen levels","termid":"GO:0036296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hyperoxia","synonyms":[{"name":"response to hyperoxic stress","type":"exact"},{"name":"response to increased oxygen tension","type":"exact"}],"termid":"GO:0055093"}


id: PBO:0053526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 523","termid":"PBO:0053526"}


id: GO:0009003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase activity (obsolete GO:0009003)","synonyms":[{"name":"signal peptidase activity","type":"exact"}],"termid":"GO:0009003"}


id: GO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Cleavage of substrates with Phe and Leu in P2.","definition_xrefs":["EC:3.4.22.41"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin F activity (obsolete GO:0016946)","synonyms":[{"name":"cathepsin F activity","type":"exact"}],"termid":"GO:0016946"}


id: GO:0048536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen development","termid":"GO:0048536"}


id: PBO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Threonine","termid":"PBO:0001065"}


id: PBO:0029342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_polycistronic_RNA_precursors","termid":"PBO:0029342"}


id: PBO:0068150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 457","termid":"PBO:0068150"}


id: FYPO:0004808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein present as aggregates of misfolded protein is greater than normal during a cellular response to heat.","definition_xrefs":["PMID:25543137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to heat","termid":"FYPO:0003152"},{"relation_name":"is_a","term_name":"increased cellular protein aggregate level","termid":"FYPO:0004180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular protein aggregate level during cellular response to heat","synonyms":[{"name":"increased cellular protein aggregate level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased cellular protein aggregate level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0004808"}


id: PBO:0083079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diphthamide synthetase; catalyzes the last amidation step of diphthamide biosynthesis using ammonium and ATP; evolutionarily conserved in eukaryotes; dph6 mutants exhibit diphthine accumulation and resistance to sordarin, which is indicative of defects in diphthamide formation on EF2; green fluorescent protein (GFP)-tagged protein localizes to the cytoplasm; DPH6/YLR143W is not an essential gene","termid":"PBO:0083079"}


id: GO:0046495
data:
  {"annotated_genes":["SJAG_04693","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109260],"is_not":false,"summary":null,"term":"GO:0046495"},{"annotations":[104668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nicotinamide riboside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide metabolic process","type":"exact"},{"name":"nicotinamide riboside metabolism","type":"exact"}],"termid":"GO:0046495","terms_by_termid":{"GO:0046495":null,"GO:0071590":null}}


id: GO:1905807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synapse pruning.","definition_xrefs":["GO_REF:0000058","PMID:27779093","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse pruning","synonyms":[{"name":"down regulation of synapse disassembly","type":"exact"},{"name":"down-regulation of synapse disassembly","type":"exact"},{"name":"downregulation of synapse disassembly","type":"exact"},{"name":"inhibition of synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905807"}


id: SO:1000107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000107 mutation_causing_out_of_frame_polypeptide_N_terminal_elongation (obsolete SO:1000107)","synonyms":[{"name":"mutation causing out of frame polypeptide N terminal elongation","type":"exact"},{"name":"out of frame polypeptide N-terminal elongation","type":"exact"}],"termid":"SO:1000107"}


id: GO:0019707
data:
  {"annotated_genes":["SJAG_01112","SJAG_04451","SJAG_00895","SJAG_01299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106321,104446,92075,99272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a sulfur atom on the cysteine of a protein molecule.","definition_xrefs":["RHEA:63372","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-cysteine S-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019707","terms_by_termid":{"GO:0019706":null}}


id: GO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"}


id: PBO:0069192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 446, pseudogene","termid":"PBO:0069192"}


id: GO:0150005
data:
  {"annotated_genes":["SJAG_04950","SJAG_02231","SJAG_03751","SJAG_04190","SJAG_01386","SJAG_04943","SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89011,95815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990334"},{"annotations":[84702,89050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120231"},{"annotations":[103303,92272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990877"},{"annotations":[100378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex capable of activating an enzyme. Activating subunits may dissociate from the catalytic unit before the enzyme is active.","definition_xrefs":["PMID:28710280","GOC:bhm","PMID:16244137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01386":null,"SJAG_02231":null,"SJAG_03751":null,"SJAG_04190":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"enzyme activator complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0150005","terms_by_termid":{"GO:0043626":null,"GO:0120231":null,"GO:1990334":null,"GO:1990877":null}}


id: SO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant located with the sequence of the mature miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_miRNA_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"VEP:mature_miRNA_variant","type":"exact"},{"name":"mature miRNA variant","type":"exact"},{"name":"snpEff:MICRO_RNA","type":"exact"},{"name":"within_mature_miRNA","type":"exact"}],"termid":"SO:0001620"}


id: GO:0006891
data:
  {"annotated_genes":["SJAG_03842","SJAG_04021","SJAG_00332","SJAG_00192","SJAG_04569","SJAG_04023","SJAG_03467","SJAG_01600","SJAG_04070","SJAG_04474","SJAG_04739","SJAG_02750","SJAG_04837","SJAG_00330","SJAG_01459","SJAG_04002","SJAG_04358","SJAG_05030","SJAG_03158","SJAG_00804","SJAG_03054","SJAG_01415","SJAG_02655","SJAG_01071","SJAG_02234","SJAG_00578","SJAG_02316","SJAG_02525","SJAG_02211","SJAG_03663","SJAG_01508","SJAG_00041"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84885,87351,92467,93486,93917,94625,94718,95270,95911,96492,98466,98687,99430,99535,99627,100280,101045,102300,103283,105737,105977,105998,108177,109922,112577,113035,113528],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[94270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048219"},{"annotations":[112982,85175,87331,105673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00192":null,"SJAG_00330":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_00804":null,"SJAG_01071":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_02211":null,"SJAG_02234":null,"SJAG_02316":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_03842":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04358":null,"SJAG_04474":null,"SJAG_04569":null,"SJAG_04739":null,"SJAG_04837":null,"SJAG_05030":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"intra-Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intra-Golgi transport","type":"exact"}],"termid":"GO:0006891","terms_by_termid":{"GO:0000301":null,"GO:0006891":null,"GO:0048219":null}}


id: GO:0042621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl","PMID:9925580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(3-hydroxyalkanoate) metabolic process","termid":"GO:0042620"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"PHA biosynthesis","type":"broad"},{"name":"PHA biosynthetic process","type":"broad"},{"name":"poly(3-hydroxyalkanoate) anabolism","type":"exact"},{"name":"poly(3-hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyalkanoate) formation","type":"exact"},{"name":"poly(3-hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:0042621"}


id: GO:0032057
data:
  {"annotated_genes":["SJAG_00786","SJAG_00690","SJAG_02592","SJAG_01942","SJAG_00169","SJAG_03869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95492,105849,88693,88992,90540,111756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"part_of","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of translation initiation in response to stress","type":"exact"},{"name":"down-regulation of translation initiation in response to stress","type":"exact"},{"name":"downregulation of translation initiation in response to stress","type":"exact"},{"name":"inhibition of translation initiation in response to stress","type":"narrow"}],"termid":"GO:0032057","terms_by_termid":{"GO:1990625":null}}


id: PBO:0053999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1323","termid":"PBO:0053999"}


id: GO:0015650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: lactate (out) + H+ (out) = lactate (in) + H+ (in).","definition_xrefs":["TC:2.A.14.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transmembrane transporter activity","termid":"GO:0015129"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lactate:proton symporter activity","synonyms":[{"name":"lactate permease","type":"broad"},{"name":"lactate:hydrogen porter activity","type":"exact"},{"name":"lactate:hydrogen symporter activity","type":"exact"},{"name":"lactate:proton porter activity","type":"exact"}],"termid":"GO:0015650"}


id: PBO:0080828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1-associated myogenesis RNA 1","termid":"PBO:0080828"}


id: GO:0106189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to the hydrolysis of a diphosphate (obsolete GO:0106189)","secondary_identifiers":["EC:7.1.3.-"],"termid":"GO:0106189"}


id: FYPO:0003575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K9 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K9 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003575"}


id: PBO:0073371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTAD3 antisense RNA 1","termid":"PBO:0073371"}


id: GO:1902464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K27 trimethylation.","definition_xrefs":["PMID:19270745","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 trimethylation (obsolete GO:1902464)","termid":"GO:1902464"}


id: PBO:0084378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-ornithine transaminase (OTAse); catalyzes the second step of arginine degradation, expression is dually-regulated by allophanate induction and a specific arginine induction process; not nitrogen catabolite repression sensitive; protein abundance increases in response to DNA replication stress; human homolog OAT complements yeast null mutant","termid":"PBO:0084378"}


id: GO:0051612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of serotonin uptake","termid":"GO:0051611"},{"relation_name":"negatively_regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of serotonin uptake","synonyms":[{"name":"down regulation of serotonin uptake","type":"exact"},{"name":"down-regulation of serotonin uptake","type":"exact"},{"name":"downregulation of serotonin uptake","type":"exact"},{"name":"negative regulation of 5-HT uptake","type":"exact"},{"name":"negative regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"negative regulation of 5HT uptake","type":"exact"},{"name":"negative regulation of serotonin import","type":"exact"}],"termid":"GO:0051612"}


id: PBO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates cdc15","termid":"PBO:0004874"}


id: GO:0048519
data:
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process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA metabolism","type":"exact"}],"termid":"GO:0051052","terms_by_termid":{"GO:0000018":null,"GO:0006282":null,"GO:0010520":null,"GO:0010569":null,"GO:0010845":null,"GO:0010846":null,"GO:0011000":null,"GO:0031582":null,"GO:0032210":null,"GO:0032215":null,"GO:0043111":null,"GO:0045128":null,"GO:0045739":null,"GO:0045951":null,"GO:0062209":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904332":null,"GO:1904514":null,"GO:1905263":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0083603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase","termid":"PBO:0083603"}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:txnOH","GOC:rl","GOC:BHF","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: GO:0009437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine metabolic process","synonyms":[{"name":"carnitine metabolism","type":"exact"},{"name":"vitamin Bt metabolic process","type":"exact"},{"name":"vitamin Bt metabolism","type":"exact"}],"termid":"GO:0009437"}


id: GO:0055102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0030234","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"lipase inhibitor activity","termid":"GO:0055102"}


id: PR:Q10237
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.04c","synonyms":[{"name":"Spom972h-pcf11","type":"exact"}],"termid":"PR:Q10237"}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: PBO:0056444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 17","termid":"PBO:0056444"}


id: PR:Q09683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand break repair protein MRE11A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10139:SF0","PRO:DNx","OMA:SCHPO00172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.07","secondary_identifiers":["UniProtKB:Q09683"],"synonyms":[{"name":"Spom972h-MRE11A","type":"exact"}],"termid":"PR:Q09683"}


id: PATO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fertile","termid":"PATO:0000955"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fertility","synonyms":[{"name":"high fertility","type":"exact"}],"termid":"PATO:0001835"}


id: FYPO:0001227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there, during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"ectopic protein localization to cytoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"protein mislocalised to cytoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"protein mislocalized to cytoplasm during cellular response to H2O2","type":"exact"},{"name":"protein mislocalized to cytoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to cytoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm in response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001227"}


id: FYPO:0001873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly takes place despite the absence of cells of the opposite mating type.","definition_xrefs":["PMID:1905818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"shmoo formation in absence of opposite mating type","synonyms":[{"name":"conjugation tube formation in absence of opposite mating type","type":"related"},{"name":"mating projection assembly in absence of opposite mating type","type":"exact"},{"name":"mating projection formation in absence of opposite mating type","type":"exact"},{"name":"shmoo without partner cell","type":"broad"}],"termid":"FYPO:0001873"}


id: PBO:0075788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 9 pseudogene 1","termid":"PBO:0075788"}


id: PBO:0056669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 7","termid":"PBO:0056669"}


id: PBO:0062276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 7 pseudogene","termid":"PBO:0062276"}


id: PBO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone M-factor receptor Map3","termid":"PBO:0001763"}


id: MOD:00285
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an aspartic acid residue, a glutamic acid residue, a methionine residue (forming a sulfonium ether), and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:10480885","PubMed:10447690","PubMed:7840679","PubMed:1320128","RESID:AA0280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-methionine residue","termid":"MOD:02071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyheme-L-aspartate ester-L-glutamate ester-L-methionine sulfonium","synonyms":[{"name":"1,5-bishydroxymethyl protoporphyrin IX 1-glutamate ester 5-aspartate ester 2-methionine sulfonium","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"[13-[(S)-(4-amino-4-carboxy)butanoyloxymethyl]-3-[(S)-(3-amino-3-carboxy)propanoyloxymethyl]-12-[(S)-(3-amino-3-carboxy)propylsulfoniumethyl]-7-ethenyl-8,17-dimethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"dihydroxyheme-L-aspartate ester-L-glutamate ester-L-methionine sulfonium","type":"exact"},{"name":"myeloperoxidase heme cofactor","type":"exact"}],"termid":"MOD:00285"}


id: PBO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt3","termid":"PBO:0001420"}


id: GO:0032130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a sterol-rich region of the plasma membrane at the cell surface overlying the contractile ring.","definition_xrefs":["PMID:15517003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000281","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"medial membrane band assembly","synonyms":[{"name":"medial membrane band formation","type":"related"}],"termid":"GO:0032130"}


id: GO:0032064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to osmotic stress","termid":"GO:0032062"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational initiation in response to osmotic stress","synonyms":[{"name":"activation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation initiation in response to osmotic stress","type":"exact"}],"termid":"GO:0032064"}


id: PBO:0012547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 (predicted)","termid":"PBO:0012547"}


id: PBO:0065441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 2","termid":"PBO:0065441"}


id: FYPO:0003717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton during vegetative growth","termid":"FYPO:0004739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003717"}


id: PBO:0053332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 165","termid":"PBO:0053332"}


id: GO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host ethylene-mediated defense response (obsolete GO:0052076)","synonyms":[{"name":"activation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"positive regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"stimulation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052076"}


id: MOD:00283
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine.","definition_xrefs":["PubMed:10550045","PubMed:11349130","RESID:AA0278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine","synonyms":[{"name":"(alpha)- ([([(5S)-5-amino-5-carboxypentyl]amino)propyl][(methyl)amino])-(omega)-methyl poly[propane-1,3-diyl(methylimino)]","type":"exact"},{"name":"MOD_RES N6-poly(methylaminopropyl)lysine","type":"exact"},{"name":"N6-[3-([(omega)-(dimethyl)aminopropyl-poly(3-[methylamino]propyl)]amino)propyl]lysine","type":"exact"},{"name":"N6-propylamino-poly(propylmethylamino)-propyldimethylamine-L-lysine","type":"exact"},{"name":"lysine derivative Lys(x)","type":"exact"},{"name":"silaffin polycationic lysine derivative","type":"exact"}],"termid":"MOD:00283"}


id: GO:0102654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-[(9Z)-octadec-9-enoyl]-2-hexadecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol)(1-) + O2 + a reduced electron acceptor = 1-18:1-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","RHEA:46764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-18:1-2-16:0-phosphatidylglycerol trans-3 desaturase activity","secondary_identifiers":["EC:1.14.19.43","MetaCyc:RXN-1725"],"termid":"GO:0102654"}


id: PBO:0079763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin recognition factor in ER associated degradation 1","termid":"PBO:0079763"}


id: GO:0009039
data:
  {"annotated_genes":["SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87627],"is_not":false,"summary":null,"term":"GO:0009039"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: urea + H2O = CO2 + 2 NH3.","definition_xrefs":["EC:3.5.1.5","RHEA:20557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"urease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r0120","MetaCyc:UREASE-RXN"],"synonyms":[{"name":"urea amidohydrolase activity","type":"related"}],"termid":"GO:0009039","terms_by_termid":{"GO:0009039":null}}


id: PBO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol pyrophosphatase Siw14","termid":"PBO:0110068"}


id: GO:1990534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-5'-thioadenosine + thermospermine + H+ = S-adenosyl 3-(methylthio)propylamine + spermidine.","definition_xrefs":["PMID:24906355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thermospermine oxidase activity","termid":"GO:1990534"}


id: PBO:0075775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 4","termid":"PBO:0075775"}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: GO:0032120
data:
  {"annotated_genes":["SJAG_04010","SJAG_00826","SJAG_02736","SJAG_02169","SJAG_04922","SJAG_00971","SJAG_04781","SJAG_03746","SJAG_00114","SJAG_02248","SJAG_00663","SJAG_04080","SJAG_02320","SJAG_02241","SJAG_04615","SJAG_03688","SJAG_01769","SJAG_03915","SJAG_04275","SJAG_03536","SJAG_04470","SJAG_02529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87468,91546,93718,93759,94990,95979,95980,96048,97867,101438,103546,106287,110099,113070,114644,114937,115118],"is_not":false,"summary":null,"term":"GO:0032120"},{"annotations":[86923],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[95983,112121,96267,90676,95984,102165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which the nascent membrane forms at the meiotic outer plaque and grows until closure occurs and forespores, or prospores, are formed.","definition_xrefs":["GOC:clt","PMID:27630265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0030437","GO:0044085","GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0099097"],"synonyms":[{"name":"FSM assembly","type":"exact"},{"name":"FSM biosynthesis","type":"exact"},{"name":"FSM formation","type":"exact"},{"name":"ascospore-type prospore membrane assembly","type":"related"},{"name":"forespore membrane biosynthesis","type":"exact"},{"name":"forespore membrane formation","type":"exact"},{"name":"prospore membrane biogenesis","type":"related"}],"termid":"GO:0032120","terms_by_termid":{"GO:0032120":null,"GO:0070583":null,"GO:1903024":null}}


id: PBO:0065326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 50","termid":"PBO:0065326"}


id: PBO:0055264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2691","termid":"PBO:0055264"}


id: PBO:0076359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synoviolin 1","termid":"PBO:0076359"}


id: PBO:0081227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 6","termid":"PBO:0081227"}


id: GO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-16 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-16 receptor activity","synonyms":[{"name":"IL-16 receptor activity","type":"exact"},{"name":"IL-16R","type":"exact"}],"termid":"GO:0042012"}


id: GO:1905115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral attachment of mitotic spindle microtubules to kinetochore.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22375062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"regulates","term_name":"lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0099607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"regulation of lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1905115"}


id: PBO:0090371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Bms1","termid":"PBO:0090371"}


id: GO:0021875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:jid","PMID:16226447","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021875"}


id: PBO:0081293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75B, pseudogene","termid":"PBO:0081293"}


id: PBO:0066264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 4","termid":"PBO:0066264"}


id: GO:0140838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) cis-proline (omega=180) = RNA polymerase II large subunit trans-proline (omega=0).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-prolyl cis-trans isomerase activity","termid":"GO:0003755"},{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat modifying activity","termid":"GO:0140994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat peptidyl-prolyl isomerase activity","termid":"GO:0140838"}


id: PBO:0079454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 7","termid":"PBO:0079454"}


id: SO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby a translocation in which one of the four broken ends loses a segment before re-joining.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_intrachromosomal_transposition","synonyms":[{"name":"deficient intrachromosomal transposition","type":"exact"}],"termid":"SO:0000062"}


id: PBO:0016522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cortex node protein Slf1","termid":"PBO:0016522"}


id: GO:0034157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 7 signaling pathway","termid":"GO:0034155"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"positive regulation of TLR7 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034157"}


id: PBO:0059313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53","termid":"PBO:0059313"}


id: PBO:0064415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8B","termid":"PBO:0064415"}


id: PBO:0057661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1253","termid":"PBO:0057661"}


id: GO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-idonate + NADP+ = 5-dehydro-D-gluconate + NADPH.","definition_xrefs":["MetaCyc:L-IDONATE-2-DEHYDROGENASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate 2-dehydrogenase activity (obsolete GO:0050027)","secondary_identifiers":["RHEA:21176","EC:1.1.1.128"],"synonyms":[{"name":"5-keto-D-gluconate 2-reductase activity","type":"related"},{"name":"5-ketogluconate 2-reductase activity","type":"related"},{"name":"5-ketoglucono-idono-reductase activity","type":"related"},{"name":"5KGR","type":"related"},{"name":"L-idonate 2-dehydrogenase activity","type":"exact"},{"name":"L-idonate dehydrogenase activity","type":"related"},{"name":"L-idonate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"reductase, 5-ketogluconate 5- (L-idonate-forming)","type":"related"}],"termid":"GO:0050027"}


id: PATO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's liking a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preference","termid":"PATO:0000773"}


id: FYPO:0004852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects an RNA transport process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"RNA localization phenotype","termid":"FYPO:0004853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"RNA transport phenotype","termid":"FYPO:0004852"}


id: PBO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 1","termid":"PBO:0052021"}


id: PBO:0089013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14","termid":"PBO:0089013"}


id: GO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The drinking behavior that is mediated by the action of angiotensin in the brain. Angiotensin stimulates the brain centers that control thirst.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drinking behavior","termid":"GO:0042756"},{"relation_name":"part_of","term_name":"brain renin-angiotensin system","termid":"GO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated drinking behavior","synonyms":[{"name":"angiotensin mediated drinking behavior","type":"exact"}],"termid":"GO:0003051"}


id: FYPO:0006981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the levels and proportions of polysaccharides in the cell wall are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30389790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell wall polysaccharide composition during vegetative growth","synonyms":[{"name":"normal cell wall polysaccharide composition during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006981"}


id: GO:0009831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that occur during cell growth that result in chemical or structural changes to existing cell walls of the type composed chiefly of cellulose and pectin. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall modification involved in multidimensional cell growth","termid":"GO:0042547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall modification involved in multidimensional cell growth","synonyms":[{"name":"cell wall modification during cell expansion","type":"broad"},{"name":"cellulose and pectin-containing cell wall modification during multidimensional cell growth","type":"related"}],"termid":"GO:0009831"}


id: PBO:0048294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase pseudogene 1","termid":"PBO:0048294"}


id: PBO:0026713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_UV","termid":"PBO:0026713"}


id: PBO:0050849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 2","termid":"PBO:0050849"}


id: GO:0141086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"negatively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"negative regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141086"}


id: PBO:0084498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein of unknown function; required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis","termid":"PBO:0084498"}


id: GO:1900299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of hexasaccharide transport","termid":"GO:1900297"},{"relation_name":"positively_regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexasaccharide transport","synonyms":[{"name":"activation of hexasaccharide transport","type":"narrow"},{"name":"up regulation of hexasaccharide transport","type":"exact"},{"name":"up-regulation of hexasaccharide transport","type":"exact"},{"name":"upregulation of hexasaccharide transport","type":"exact"}],"termid":"GO:1900299"}


id: PBO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 8","termid":"PBO:0060572"}


id: GO:0030079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bacteriochlorophyll a binding complex that is peripherally associated to the bacterial reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}


id: PBO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved GTPase Gpn2 (predicted)","termid":"PBO:0034746"}


id: PBO:0076504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 4","termid":"PBO:0076504"}


id: FYPO:0006598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of threonine at position 3 of histone H3 is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-T3 phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone H3 phosphorylation at T3 during vegetative growth","type":"exact"},{"name":"decreased histone H3-T3 phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-pT3 during vegetative growth","type":"related"},{"name":"decreased histone H3T3 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-T3 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006598"}


id: GO:1903512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytanic acid.","definition_xrefs":["GOC:dph","GO_REF:0000068","GOC:TermGenie","PMID:16799769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"methyl-branched fatty acid metabolic process","termid":"GO:0097089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"phytanic acid metabolic process","synonyms":[{"name":"phytanic acid metabolism","type":"exact"}],"termid":"GO:1903512"}


id: PBO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 55","termid":"PBO:0071053"}


id: FYPO:0006953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular asparagine level","synonyms":[{"name":"increased asparagine accumulation","type":"related"},{"name":"increased cellular L-asparagine level","type":"exact"},{"name":"increased cellular asparagine level during mitotic cell cycle","type":"related"},{"name":"increased cellular asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006953"}


id: GO:0016649
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces quinone or similar compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.5.-"],"termid":"GO:0016649","terms_by_termid":{"GO:0004657":null}}


id: PBO:0051165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-48","termid":"PBO:0051165"}


id: PBO:0042131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 2","termid":"PBO:0042131"}


id: GO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stable, specialized structure for the ingestion of food by the cell into phagosomes.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytostome","secondary_identifiers":["Wikipedia:Cytostome"],"termid":"GO:0031910"}


id: GO:1904770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an intramembranous bone is generated and organized.","definition_xrefs":["GO_REF:0000083","GOC:TermGenie","PMID:26399686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous bone morphogenesis","synonyms":[{"name":"intramembranous bones morphogenesis","type":"related"},{"name":"membrane bone morphogenesis","type":"related"}],"termid":"GO:1904770"}


id: PATO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness.","definition_xrefs":["Answers.com:Answers.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spongy","termid":"PATO:0001480"}


id: GO:0048883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cluster of a relatively undifferentiated cell originating at specific cephalic placodes and depositing proneuromasts along a developing lateral line, from which the neuromasts will develop.","definition_xrefs":["PMID:15832385","PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast primordium migration","synonyms":[{"name":"lateral line primordium migration","type":"exact"}],"termid":"GO:0048883"}


id: PBO:0042962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4","termid":"PBO:0042962"}


id: PBO:0042999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin B","termid":"PBO:0042999"}


id: GO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + sulfite + H+ = L-cysteate + phosphate.","definition_xrefs":["PMID:19761441","RHEA:26486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"cysteate synthase activity","secondary_identifiers":["EC:2.5.1.76","MetaCyc:RXN-11108"],"termid":"GO:0044686"}


id: PR:Q9Y825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C25H1.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.06","synonyms":[{"name":"Spom972h-pcf3","type":"exact"}],"termid":"PR:Q9Y825"}


id: PBO:0068810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 47, pseudogene","termid":"PBO:0068810"}


id: PATO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, invasive","termid":"PATO:0002129"}


id: PBO:0083484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene UIP4/YPL186C","termid":"PBO:0083484"}


id: FYECO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zymolyase was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zymolyase","termid":"FYECO:0000298"}


id: GO:0021929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to stellate cells. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:jid","PMID:15157725","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stellate cell precursor proliferation","termid":"GO:0021929"}


id: PBO:0052704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 5","termid":"PBO:0052704"}


id: GO:0032557
data:
  {"annotated_genes":["SJAG_02288","SJAG_02370","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87045,83967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002135"},{"annotations":[87849,87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to a pyrimidine ribonucleotide, any compound consisting of a pyrimidine ribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide binding","termid":"GO:0019103"},{"relation_name":"is_a","term_name":"ribonucleotide binding","termid":"GO:0032553"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02288":null,"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrimidine ribonucleotide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032557","terms_by_termid":{"GO:0002134":null,"GO:0002135":null}}


id: PBO:0051282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-17","termid":"PBO:0051282"}


id: PBO:0067306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 392, pseudogene","termid":"PBO:0067306"}


id: PBO:0053406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 339","termid":"PBO:0053406"}


id: GO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetone + ATP + CO2 + 2 H2O = acetoacetate + AMP + 4 H+ + 2 phosphate.","definition_xrefs":["RHEA:18385","EC:6.4.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acetone carboxylase activity","secondary_identifiers":["KEGG_REACTION:R05735","MetaCyc:6.4.1.6-RXN"],"synonyms":[{"name":"acetone:carbon-dioxide ligase (AMP-forming)","type":"related"}],"termid":"GO:0018710"}


id: GO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"negatively_regulates","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell cytokine production","synonyms":[{"name":"down regulation of dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of dendritic cell cytokine production","type":"exact"},{"name":"downregulation of dendritic cell cytokine production","type":"exact"},{"name":"inhibition of dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002731"}


id: MOD:01941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0593#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asp)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01941"}


id: GO:0140724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of patulin.","definition_xrefs":["PMID:25625822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"patulin biosynthetic process","termid":"GO:0140723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of patulin biosynthetic process","synonyms":[{"name":"positive regulation of patulin anabolism","type":"exact"},{"name":"positive regulation of patulin formation","type":"exact"},{"name":"positive regulation of patulin synthesis","type":"exact"}],"termid":"GO:0140724"}


id: GO:0008002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The electron-lucent layer of the basal lamina adjacent to the basal plasma membrane of the cells that rest on the lamina.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete lamina lucida (obsolete GO:0008002)","secondary_identifiers":["Wikipedia:Lamina_lucida"],"termid":"GO:0008002"}


id: PBO:0031642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_shmoo_formation","termid":"PBO:0031642"}


id: PBO:0055352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2781","termid":"PBO:0055352"}


id: GO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth of symbiont involved in interaction with host (obsolete GO:0044144)","synonyms":[{"name":"modulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044144"}


id: PBO:0082674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the eisosome with unknown function; GFP-fusion protein localizes to the cytoplasm; specifically phosphorylated in vitro by mammalian diphosphoinositol pentakisphosphate (IP7)","termid":"PBO:0082674"}


id: GO:0099138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric sorocarp in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric sorocarp development","termid":"GO:0099134"},{"relation_name":"is_a","term_name":"altruistic, chimeric, non-reproductive fruiting body development","termid":"GO:0099137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric sorocarp development","synonyms":[{"name":"fully co-operative, chimeric sorocarp development","type":"exact"}],"termid":"GO:0099138"}


id: GO:0031546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a brain-derived neurotrophic factor receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"brain-derived neurotrophic factor receptor binding","synonyms":[{"name":"BDNF receptor binding","type":"exact"},{"name":"brain-derived neurotrophic factor ligand","type":"narrow"}],"termid":"GO:0031546"}


id: PBO:0030509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protein_kinase_inhibitor","termid":"PBO:0030509"}


id: PBO:0089015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionyl-tRNA formyltransferase Fmt1","termid":"PBO:0089015"}


id: PBO:0082409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family transcriptional regulator; associates with TFIID, and is involved in transcription initiation at TATA-containing promoters; essential for meiosis and expression of meiosis-specific genes;  binds acetylated histone H4 at double-strand break (DSB) sites, and promotes end resection, loading of RPA and Rad51p and ds break repair by homologous recombination; contains two bromodomains that correspond to the C-terminal region of mammalian TAF1; partially redundant with paralog Bdf2p","termid":"PBO:0082409"}


id: PBO:0084477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cell cycle arrest and other responses leading to mating; also encoded by MF(ALPHA)2, although MF(ALPHA)1 produces most alpha-factor; binds copper(II) ions","termid":"PBO:0084477"}


id: PBO:0081219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc metallopeptidase STE24","termid":"PBO:0081219"}


id: GO:0140361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic-GMP-AMP from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transport","termid":"GO:1903790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane import across plasma membrane","termid":"GO:0140361"}


id: GO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the post-embryonic phase.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic foregut morphogenesis","termid":"GO:0048618"}


id: GO:0050669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sulfur amino acid metabolic process","termid":"GO:0031336"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"negatively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"negative regulation of homocysteine metabolic process","synonyms":[{"name":"down regulation of homocysteine metabolic process","type":"exact"},{"name":"down-regulation of homocysteine metabolic process","type":"exact"},{"name":"downregulation of homocysteine metabolic process","type":"exact"},{"name":"inhibition of homocysteine metabolic process","type":"narrow"},{"name":"negative regulation of Hcy metabolic process","type":"exact"},{"name":"negative regulation of Hcy metabolism","type":"exact"},{"name":"negative regulation of homocysteine metabolism","type":"exact"}],"termid":"GO:0050669"}


id: PR:O60165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.01c","synonyms":[{"name":"Spom972h-spn7","type":"exact"}],"termid":"PR:O60165"}


id: MOD:00994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-bromo-L-tyrosine","termid":"MOD:01025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3'-bromotyrosine","termid":"MOD:00994"}


id: GO:0060808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where a mesodermal cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell as part of the process of gastrulation.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"positively_regulates","term_name":"mesodermal to mesenchymal transition involved in gastrulation","termid":"GO:0060809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal to mesenchymal transition involved in gastrulation","termid":"GO:0060808"}


id: PBO:0071365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 24","termid":"PBO:0071365"}


id: PBO:0047795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box G1","termid":"PBO:0047795"}


id: PBO:0080077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 39","termid":"PBO:0080077"}


id: GO:0045246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the heteromeric enzymes, located in the cytosol, that act in the tricarboxylic acid (TCA) cycle.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic tricarboxylic acid cycle enzyme complex (obsolete GO:0045246)","synonyms":[{"name":"TCA cycle enzyme complex","type":"broad"},{"name":"tricarboxylic acid cycle enzyme complex","type":"broad"}],"termid":"GO:0045246"}


id: PBO:0089286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15","termid":"PBO:0089286"}


id: PBO:0002969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002969"}


id: PR:P87304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-coenzyme A thioesterase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03842","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase C31F10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.02","secondary_identifiers":["UniProtKB:P87304"],"synonyms":[{"name":"Spom972h-ACOT13","type":"exact"}],"termid":"PR:P87304"}


id: GO:0015123
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94866],"is_not":false,"summary":null,"term":"GO:0015123"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetate from one side of a membrane to the other. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"acetate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015123","terms_by_termid":{"GO:0015123":null}}


id: PBO:0028083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology","termid":"PBO:0028083"}


id: GO:0033059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition or aggregation of coloring matter in a cell.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular pigmentation","termid":"GO:0033059"}


id: GO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of m-cresol (3-hydroxytoluene), the meta-isoform of cresol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"m-cresol metabolic process","termid":"GO:0018925"},{"relation_name":"is_a","term_name":"cresol catabolic process","termid":"GO:0046199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"m-cresol catabolic process","secondary_identifiers":["UM-BBD_pathwayID:mcr","MetaCyc:M-CRESOL-DEGRADATION-PWY"],"synonyms":[{"name":"3-hydroxytoluene catabolic process","type":"exact"},{"name":"3-hydroxytoluene catabolism","type":"exact"},{"name":"m-cresol breakdown","type":"exact"},{"name":"m-cresol catabolism","type":"exact"},{"name":"m-cresol degradation","type":"exact"},{"name":"meta-cresol catabolic process","type":"exact"},{"name":"meta-cresol catabolism","type":"exact"}],"termid":"GO:0042213"}


id: PR:Q9HDY7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scm3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1A10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.02","synonyms":[{"name":"Spom972h-scm3","type":"exact"}],"termid":"PR:Q9HDY7"}


id: SO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 18th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K18_acetylation_site","synonyms":[{"name":"H3K18 acetylation site","type":"exact"},{"name":"H3K18ac","type":"exact"}],"termid":"SO:0001718"}


id: PBO:0017997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transmembrane transporter Str1","termid":"PBO:0017997"}


id: GO:0007524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult visceral muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral muscle development","termid":"GO:0007522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult visceral muscle development","termid":"GO:0007524"}


id: PBO:0003479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper chaperone Atx1","termid":"PBO:0003479"}


id: PBO:0080737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 1 pseudogene 1","termid":"PBO:0080737"}


id: PBO:0074523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA B1","termid":"PBO:0074523"}


id: PBO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Asl1, predicted O-glucosyl hydrolase","termid":"PBO:0000192"}


id: GO:1905636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["PMID:23675531","GOC:bc","GO_REF:0000059","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"},{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA polymerase II regulatory region sequence-specific DNA binding","synonyms":[{"name":"activation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"narrow"},{"name":"up regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"up-regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"upregulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"}],"termid":"GO:1905636"}


id: GO:0090026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotaxis","termid":"GO:0090025"},{"relation_name":"positively_regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte chemotaxis","termid":"GO:0090026"}


id: GO:0009663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasmodesma, a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["GOC:mah","PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmodesma organization","synonyms":[{"name":"plasmodesma organisation","type":"exact"},{"name":"plasmodesma organization and biogenesis","type":"related"},{"name":"plasmodesmata organization and biogenesis","type":"related"}],"termid":"GO:0009663"}


id: PBO:0077698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 2","termid":"PBO:0077698"}


id: MOD:00030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an N-formyl-L-methionine, a natural pretranslational modification.","definition_xrefs":["ChEBI:33718","RESID:AA0021#FMET","PubMed:10825024","PubMed:11152118","PubMed:2165784","PubMed:3042771","Unimod:107#N-term","OMSSA:22","PubMed:8758896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formyl-L-methionine residue","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"Addition of N-formyl met","type":"related"},{"name":"FormylMet","type":"related"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"fMet","type":"exact"},{"name":"nformylmet","type":"exact"}],"termid":"MOD:00030"}


id: GO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"varicosity","termid":"GO:0043196"}


id: GO:0062203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + peregrinol diphosphate = diphosphate + viteagnusin D.","definition_xrefs":["RHEA:62180","PMID:29315936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Viteagnusin D synthase activity","termid":"GO:0062203"}


id: PBO:0066230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM38 antisense RNA 1","termid":"PBO:0066230"}


id: GO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 6-kinase activity","termid":"GO:0000831"}


id: SO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region including the Transcription Start Site (TSS) of a gene and serving as a platform for Pre-Initiation Complex (PIC) assembly, enabling transcription of a gene under certain conditions.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_promoter","synonyms":[{"name":"Eukaryotic promoter","type":"exact"}],"termid":"SO:0002221"}


id: PBO:0055026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2441","termid":"PBO:0055026"}


id: GO:0062030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of stress-granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress granule assembly","termid":"GO:0062028"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of stress granule assembly","termid":"GO:0062030"}


id: PBO:0065784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine and serine rich 1","termid":"PBO:0065784"}


id: FYPO:0001307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of long-chain fatty acid-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"decreased lcfa-ligase activity","type":"exact"},{"name":"reduced long-chain fatty acid-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001307"}


id: PBO:0057192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 365a","termid":"PBO:0057192"}


id: PBO:0074265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 6A1","termid":"PBO:0074265"}


id: PBO:0047073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member B","termid":"PBO:0047073"}


id: PATO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000106 acid sensitivity (obsolete PATO:0000106)","termid":"PATO:0000106"}


id: PR:Q9UU78
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp103 gene.","definition_xrefs":["UniProtKB:Q9UU78","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.09c","synonyms":[{"name":"Spom972h-rpp103","type":"exact"}],"termid":"PR:Q9UU78"}


id: PBO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.8","termid":"PBO:0001483"}


id: GO:0020027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hemoglobin, including its uptake and utilization.","definition_xrefs":["GOC:jl","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin metabolic process","synonyms":[{"name":"haemoglobin metabolic process","type":"exact"},{"name":"haemoglobin metabolism","type":"exact"},{"name":"hemoglobin metabolism","type":"exact"}],"termid":"GO:0020027"}


id: PBO:0082473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calpain-like cysteine protease; involved in proteolytic activation of Rim101p in response to alkaline pH; localizes to punctate structures in alkaline conditions and in vps4 mutant; has similarity to A. nidulans palB","termid":"PBO:0082473"}


id: PBO:0053618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 659","termid":"PBO:0053618"}


id: GO:0140956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl79-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of up to three methyl group to the lysine residue at position 79 of the histone H3 protein, producing H3K79me3.","definition_xrefs":["PMID:15371351","RHEA:60328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0008276","GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"histone H3K79 trimethyltransferase activity","secondary_identifiers":["EC:2.1.1.360"],"synonyms":[{"name":"histone H3-K79 trimethylation","type":"broad"},{"name":"histone H3K79 trimethylase activity","type":"exact"},{"name":"histone H3K79 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethylase activity (H3-K79 specific)","type":"exact"},{"name":"histone trimethyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone-H3K79 trimethyltransferase activity","type":"exact"}],"termid":"GO:0140956"}


id: GO:0009060
data:
  {"annotated_genes":["SJAG_07003","SJAG_02646","SJAG_00755","SJAG_02398","SJAG_00502","SJAG_MIT15","SJAG_02464","SJAG_00133","SJAG_01524","SJAG_00260","SJAG_03337","SJAG_00438","SJAG_00542","SJAG_03290","SJAG_02504","SJAG_01753","SJAG_07006","SJAG_02744","SJAG_00601","SJAG_02433","SJAG_01539","SJAG_MIT13","SJAG_01671","SJAG_00976","SJAG_03163","SJAG_04122","SJAG_02006","SJAG_MIT09","SJAG_00080","SJAG_03813","SJAG_02564","SJAG_02598","SJAG_MIT04","SJAG_03920","SJAG_00915","SJAG_00836","SJAG_01895","SJAG_01402","SJAG_02158","SJAG_00985","SJAG_01355","SJAG_03490","SJAG_01077","SJAG_01190","SJAG_05204","SJAG_04843","SJAG_01922","SJAG_02105","SJAG_02176","SJAG_06382","SJAG_03588","SJAG_01490","SJAG_07007","SJAG_05629","SJAG_MIT03","SJAG_03114","SJAG_02592","SJAG_00866","SJAG_04152","SJAG_MIT37","SJAG_03925","SJAG_00698","SJAG_00203","SJAG_03064","SJAG_01763","SJAG_01062","SJAG_04362","SJAG_01630","SJAG_MIT20"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83653,91177,95192,104761,110396,114568],"is_not":false,"summary":null,"term":"GO:0009060"},{"annotations":[112259],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042775"},{"annotations":[111599,110384,110808,88126,104448,85430,112965,112260,115131,115151,84422,115174],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[109021],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006120"},{"annotations":[85026,85391,112904,109364],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[112261,100237,109569,86176,115155,113802,104124,100642,114267,111247],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[92894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006119"},{"annotations":[99195,89027,103975,104955,91013,101156,90048,111993,99815,97973,104065,99844,115163,85336,115167,115158,89450],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[90548,105867,93795,108048],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[108235,86116,92529,95617,111887,109366,112708,95927,114615,69913,106300,86374,102891,85028,90630,109620,111122,112906,85393],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.","definition_xrefs":["ISBN:0140513590","GOC:das","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00203":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00502":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01402":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01539":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02006":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02176":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04362":null,"SJAG_04843":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06382":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_respiration#Aerobic_respiration","MetaCyc:PWY-3781"],"termid":"GO:0009060","terms_by_termid":{"GO:0006099":null,"GO:0006119":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0009060":null,"GO:0042775":null,"GO:0042776":null,"GO:1903715":null}}


id: PBO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 11","termid":"PBO:0052499"}


id: PBO:0053647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 698","termid":"PBO:0053647"}


id: PBO:0003888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S23 (predicted)","termid":"PBO:0003888"}


id: GO:1903021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["PMID:12192046","GOC:TermGenie","GOC:rb","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:1903021"}


id: PBO:0027455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_triphosphatase_activity","termid":"PBO:0027455"}


id: GO:0032618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-15 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-15 production","secondary_identifiers":["GO:0042233","GO:0072613"],"synonyms":[{"name":"IL-15 production","type":"exact"},{"name":"interleukin-15 biosynthetic process","type":"narrow"},{"name":"interleukin-15 secretion","type":"narrow"}],"termid":"GO:0032618"}


id: PBO:0056664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 2","termid":"PBO:0056664"}


id: PBO:0063939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 4","termid":"PBO:0063939"}


id: PBO:0079421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 4","termid":"PBO:0079421"}


id: PBO:0040432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting beta pseudogene 1","termid":"PBO:0040432"}


id: PBO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 31","termid":"PBO:0075292"}


id: PBO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_benomyl","termid":"PBO:0031336"}


id: GO:0009768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem I, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center.","definition_xrefs":["GOC:jid","ISBN:0716731363","ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, light harvesting","termid":"GO:0009765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthesis, light harvesting in photosystem I","termid":"GO:0009768"}


id: GO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"socket cell differentiation","termid":"GO:0090437"}


id: PBO:0066398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 1 beta","termid":"PBO:0066398"}


id: GO:0102471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6C-glucosyl-2-hydroxynaringenin = isovitexin-7-olate + H2O.","definition_xrefs":["EC:4.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-hydroxynaringenin-6C-glucoside dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14076"],"termid":"GO:0102471"}


id: FYPO:0000840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level","synonyms":[{"name":"RNA accumulation: normal","type":"related"},{"name":"normal cellular RNA level","type":"exact"},{"name":"normal mRNA level","type":"narrow"},{"name":"normal transcript level","type":"exact"}],"termid":"FYPO:0000840"}


id: FYPO:0006695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-methionine (SAM) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-methionine level during vegetative growth","synonyms":[{"name":"decreased cellular SAM level during vegetative growth","type":"exact"},{"name":"decreased S-adenosyl-L-methionine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-methionine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylmethionine level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-methionine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006695"}


id: PBO:0042809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competing endogenous lncRNA 3 for miR-645","termid":"PBO:0042809"}


id: GO:1902903
data:
  {"annotated_genes":["SJAG_04100","SJAG_00279","SJAG_04703","SJAG_01943","SJAG_04522","SJAG_00521","SJAG_02700","SJAG_01993","SJAG_01894","SJAG_04982","SJAG_03455","SJAG_02566","SJAG_04479","SJAG_04312","SJAG_03086"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114748,95059,88688,88503,110477,84482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[98006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[103778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[86874,98898,86029,97908,101315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[93897,110480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of supramolecular fiber organization.","definition_xrefs":["GO_REF:0000058","PMID:23921388","GOC:TermGenie","GOC:rl","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04312":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of fibril organisation","type":"related"}],"termid":"GO:1902903","terms_by_termid":{"GO:0030833":null,"GO:0031117":null,"GO:0032231":null,"GO:0034316":null,"GO:0042989":null,"GO:0051016":null}}


id: SOFP:pr_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"An amino acid modification in some variant feature relative to the reference sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pr_change","termid":"SOFP:pr_change"}


id: GO:0003788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete actin monomer sequestering activity (obsolete GO:0003788)","synonyms":[{"name":"actin monomer sequestering activity","type":"exact"}],"termid":"GO:0003788"}


id: PBO:0067169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 222, pseudogene","termid":"PBO:0067169"}


id: PBO:0049539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 3","termid":"PBO:0049539"}


id: GO:2000457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 17 cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell extravasation","termid":"GO:2000455"},{"relation_name":"positively_regulates","term_name":"T-helper 17 cell extravasation","termid":"GO:0035699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 17 cell extravasation","termid":"GO:2000457"}


id: GO:0072229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal convoluted tubule over time, from its formation to the mature structure. The metanephric proximal convoluted tubule is the most proximal portion of the metanephric proximal tubule and extends from the metanephric glomerular capsule to the metanephric proximal straight tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal convoluted tubule development","termid":"GO:0072019"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal convoluted tubule development","termid":"GO:0072229"}


id: PBO:0054980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2394","termid":"PBO:0054980"}


id: PBO:0064568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP5 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064568"}


id: PBO:0057380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548av","termid":"PBO:0057380"}


id: PBO:0042381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD247 molecule","termid":"PBO:0042381"}


id: PBO:0003571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADhesioN defective","termid":"PBO:0003571"}


id: PBO:0027361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_echinocandin","termid":"PBO:0027361"}


id: GO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of touch in which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of touch","termid":"GO:0050975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:0050976"}


id: GO:0140978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial large ribosomal subunit.","definition_xrefs":["PMID:28892042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit binding","termid":"GO:0043023"},{"relation_name":"is_a","term_name":"mitochondrial ribosome binding","termid":"GO:0097177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit binding","synonyms":[{"name":"mitochondrial ribosomal large subunit binding","type":"exact"}],"termid":"GO:0140978"}


id: PBO:0053372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 297","termid":"PBO:0053372"}


id: PBO:0064218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 3","termid":"PBO:0064218"}


id: PBO:0046308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease domain containing 1","termid":"PBO:0046308"}


id: PBO:0044883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 10","termid":"PBO:0044883"}


id: PBO:0061368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 28","termid":"PBO:0061368"}


id: PBO:0047041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member B","termid":"PBO:0047041"}


id: PBO:0033748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_recombination_frequency_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033748"}


id: PATO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction approximating the shape of a circle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circling direction","termid":"PATO:0001904"}


id: PBO:0069981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1276, pseudogene","termid":"PBO:0069981"}


id: PBO:0082232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; specificity for isomaltose, maltose, and palatinose, but not alpha-methylglucoside; most distant member of the IMA isomaltase family, but with similar catalytic properties as Ima1p and Ima2p; not required for isomaltose utilization, but Ima5p overexpression allows the ima1 null mutant to grow on isomaltose; can cleave alpha-1,3 linkage of nigerose and turanose and alpha-1,5 linkage of leucrose and is very sensitive to temperature in vitro","termid":"PBO:0082232"}


id: PBO:0087125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm; CTL1 has a paralog, CET1, that arose from the whole genome duplication","termid":"PBO:0087125"}


id: PBO:0081530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 440","termid":"PBO:0081530"}


id: PBO:0045822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 12","termid":"PBO:0045822"}


id: PR:O60085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.03","secondary_identifiers":["UniProtKB:O60085"],"synonyms":[{"name":"MAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MetAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-METAP2","type":"exact"},{"name":"peptidase M (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60085"}


id: PBO:0059537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site L","termid":"PBO:0059537"}


id: GO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a marginal zone B cell. Marginal zone B cells are localized in a distinct anatomical region of the spleen that represents the major antigen-filtering and scavenging area (by specialized macrophages resident there). It appears that they are preselected to express a BCR repertoire similar to B-1 B cells, biased toward bacterial cell wall constituents and senescent self-components (such as oxidized LDL).","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"marginal zone B cell differentiation","synonyms":[{"name":"marginal zone B cell development","type":"related"},{"name":"marginal zone B lymphocyte differentiation","type":"exact"},{"name":"marginal zone B-cell differentiation","type":"exact"},{"name":"marginal zone B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002315"}


id: PBO:0056965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23b","termid":"PBO:0056965"}


id: PBO:0084070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in initiation of Mitotic Exit Network (MEN); GTP-binding protein of the Ras superfamily; accumulates at daughter spindle pole body and activates MEN kinase cascade; controls actomyosin and septin dynamics during cytokinesis","termid":"PBO:0084070"}


id: GO:0098576
data:
  {"annotated_genes":["SJAG_00852","SJAG_01249","SJAG_04363","SJAG_00077","SJAG_00797","SJAG_04583","SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99922,96608],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[90887,95932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[92417,86158,89994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"Any side (leaflet) of a membrane that faces the lumen of an organelle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_01249":null,"SJAG_01806":null,"SJAG_04363":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lumenal side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098576","terms_by_termid":{"GO:0098553":null,"GO:0099616":null,"GO:0099617":null}}


id: PBO:0054525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1925","termid":"PBO:0054525"}


id: PBO:0027349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere_central_core","termid":"PBO:0027349"}


id: GO:0005953
data:
  {"annotated_genes":["SJAG_04923","SJAG_03029"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91895,97548],"is_not":false,"summary":null,"term":"GO:0005953"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme, composed of an alpha and a beta subunit. Participates in the post-translational C-terminal modification of several small GTPases, allowing their targeting to the membrane.","definition_xrefs":["PMID:9781874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CAAX-protein geranylgeranyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005953","terms_by_termid":{"GO:0005953":null}}


id: PBO:0067782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 84","termid":"PBO:0067782"}


id: GO:0097227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.","definition_xrefs":["MP:0009834","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm annulus","termid":"GO:0097227"}


id: PBO:0058399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4771-1","termid":"PBO:0058399"}


id: GO:0051080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the nuclear membranes during the second division of meiosis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane disassembly","termid":"GO:0051078"},{"relation_name":"part_of","term_name":"meiosis II","termid":"GO:0007135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II nuclear membrane disassembly","synonyms":[{"name":"meiosis II nuclear envelope breakdown","type":"related"},{"name":"meiosis II nuclear envelope catabolism","type":"related"},{"name":"meiosis II nuclear envelope degradation","type":"related"},{"name":"meiosis II nuclear envelope disassembly","type":"related"}],"termid":"GO:0051080"}


id: PBO:0055937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 43","termid":"PBO:0055937"}


id: SO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region that is bounded either side by a particular kind of region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanked","termid":"SO:0000357"}


id: SO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short open reading frame that is found in the 5' untranslated region of an mRNA and plays a role in translational regulation.","definition_xrefs":["PMID:12890013","POMBASE:mah","PMID:16153175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uORF","secondary_identifiers":["PMID:26684391"],"synonyms":[{"name":"regulatory uORF","type":"exact"},{"name":"upstream ORF","type":"exact"}],"termid":"SO:0002027"}


id: PR:Q10149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grh1 gene.","definition_xrefs":["UniProtKB:Q10149","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.02c","synonyms":[{"name":"Spom972h-grh1","type":"exact"}],"termid":"PR:Q10149"}


id: GO:0035981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a tongue muscle cell.","definition_xrefs":["CL:0002673","GOC:yaf","PMID:3393851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tongue muscle cell differentiation","termid":"GO:0035981"}


id: PBO:0075372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX9 antisense RNA 1","termid":"PBO:0075372"}


id: FYPO:0005570
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115655,115656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115634,115627,115626,115638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell periphery during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005570","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as an activin receptor. Heterodimeric activin receptors, comprising one Type I activin receptor and one Type II receptor polypeptide, and heterotrimeric receptors have been observed.","definition_xrefs":["PMID:8307945","PMID:8622651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"activin receptor complex","termid":"GO:0048179"}


id: PBO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1B","termid":"PBO:0060138"}


id: PBO:0080320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 84 pseudogene","termid":"PBO:0080320"}


id: FYPO:0001668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is normal (i.e. indistinguishable from wild type). Protein processing is any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["PomBase:mah","GO:0016485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein processing during vegetative growth","synonyms":[{"name":"normal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001668"}


id: PBO:0002899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nudix family hydrolase","termid":"PBO:0002899"}


id: GO:1905382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:10022900","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"positively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0016073","GO:0008150"],"is_obsolete":false,"name":"positive regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"activation of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"activation of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905382"}


id: PR:O60178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nta1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.03c","synonyms":[{"name":"NT-amidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nta1","type":"exact"}],"termid":"PR:O60178"}


id: GO:1903648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chlorophyll catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:24719469","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll catabolic process","termid":"GO:0010271"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole catabolic process","termid":"GO:1901406"},{"relation_name":"positively_regulates","term_name":"chlorophyll catabolic process","termid":"GO:0015996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chlorophyll catabolic process","synonyms":[{"name":"activation of chlorophyll breakdown","type":"narrow"},{"name":"activation of chlorophyll catabolic process","type":"narrow"},{"name":"activation of chlorophyll catabolism","type":"narrow"},{"name":"activation of chlorophyll degradation","type":"narrow"},{"name":"positive regulation of chlorophyll breakdown","type":"exact"},{"name":"positive regulation of chlorophyll catabolism","type":"exact"},{"name":"positive regulation of chlorophyll degradation","type":"exact"},{"name":"up regulation of chlorophyll breakdown","type":"exact"},{"name":"up regulation of chlorophyll catabolic process","type":"exact"},{"name":"up regulation of chlorophyll catabolism","type":"exact"},{"name":"up regulation of chlorophyll degradation","type":"exact"},{"name":"up-regulation of chlorophyll breakdown","type":"exact"},{"name":"up-regulation of chlorophyll catabolic process","type":"exact"},{"name":"up-regulation of chlorophyll catabolism","type":"exact"},{"name":"up-regulation of chlorophyll degradation","type":"exact"},{"name":"upregulation of chlorophyll breakdown","type":"exact"},{"name":"upregulation of chlorophyll catabolic process","type":"exact"},{"name":"upregulation of chlorophyll catabolism","type":"exact"},{"name":"upregulation of chlorophyll degradation","type":"exact"}],"termid":"GO:1903648"}


id: PBO:0074921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 90","termid":"PBO:0074921"}


id: PBO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit (predicted)","termid":"PBO:0004711"}


id: GO:0072521
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id: PR:Q9UU84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug170 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 170 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.03","synonyms":[{"name":"Spom972h-mug170","type":"exact"}],"termid":"PR:Q9UU84"}


id: GO:0097168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal stem cells, resulting in the expansion of a stem cell population. A mesenchymal stem cell, or MSC, is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:yaf","PMID:20626275","CL:0000134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell proliferation","synonyms":[{"name":"MSC proliferation","type":"exact"}],"termid":"GO:0097168"}


id: GO:0042250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized embryonic epithelial sheet.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of embryonic epithelium","termid":"GO:0016332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of polarity of embryonic epithelium","termid":"GO:0042250"}


id: GO:1904450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2342602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"positively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of aspartate secretion","synonyms":[{"name":"activation of aspartate secretion","type":"narrow"},{"name":"up regulation of aspartate secretion","type":"exact"},{"name":"up-regulation of aspartate secretion","type":"exact"},{"name":"upregulation of aspartate secretion","type":"exact"}],"termid":"GO:1904450"}


id: GO:0019727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NAD+ = H+ + mevaldate + NADH.","definition_xrefs":["RHEA:13221"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADH) activity (obsolete GO:0019727)","secondary_identifiers":["KEGG_REACTION:R02246","MetaCyc:MEVALDATE-REDUCTASE-RXN"],"termid":"GO:0019727"}


id: GO:0038077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in innate immune response (obsolete GO:0038077)","synonyms":[{"name":"MAP3K activity involved in innate immune response","type":"exact"},{"name":"MAPKKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038077"}


id: PBO:0089250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor, Noc1 related","termid":"PBO:0089250"}


id: PBO:0055397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2827","termid":"PBO:0055397"}


id: GO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the brain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell differentiation","termid":"GO:0060019"}


id: PBO:0016581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase gamma","termid":"PBO:0016581"}


id: PR:O74556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.02 gene.","definition_xrefs":["UniProtKB:O74556","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C970.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.02","synonyms":[{"name":"Spom972h-SPCC970.02","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C970.02 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74556"}


id: GO:0098002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes by which a bacteriophage initially commits to infection by binding the host receptor irreversibly. Disruption of the phage:cell complex at this step results in the loss of infective phage virions since the process is characterized by conformational changes of bacteriophage head and tail proteins and injection of bacteriophage proteins into the infected cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry receptor-mediated virion attachment to host cell","termid":"GO:0098670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage irreversible attachment to host cell","synonyms":[{"name":"irreversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"},{"name":"phage irreversible adsorption","type":"related"}],"termid":"GO:0098002"}


id: MOD:02010
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a stearoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-stearoylated residue","termid":"MOD:02010"}


id: PBO:0045956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFLAM antisense RNA 3","termid":"PBO:0045956"}


id: GO:0021788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","PMID:14699587","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in neural tube","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in neural tube","type":"exact"}],"termid":"GO:0021788"}


id: FYPO:0000159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome condensation is abnormal. Chromosome condensation is the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division.","definition_xrefs":["GO:0030261","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromosome condensation","secondary_identifiers":["FYPO:0000028"],"synonyms":[{"name":"chromosome condensation defects","type":"exact"}],"termid":"FYPO:0000159"}


id: PBO:0005537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded DNA binding protein Ssb2","termid":"PBO:0005537"}


id: GO:0000472
data:
  {"annotated_genes":["SJAG_00772","SJAG_04224","SJAG_04524","SJAG_02250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95966,103785,105174,111347],"is_not":false,"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5'-External Transcribed Spacer (5'-ETS) and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A1","type":"narrow"}],"termid":"GO:0000472","terms_by_termid":{"GO:0000472":null}}


id: PBO:0087165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C31","termid":"PBO:0087165"}


id: FYPO:0006860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA replication is decreased in ribosomal DNA repeats.","definition_xrefs":["PomBase:mah","PMID:30796050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"decreased mitotic DNA replication at rDNA","synonyms":[{"name":"decreased DNA replication at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased mitotic DNA replication at rDNA during vegetative growth","type":"exact"},{"name":"decreased mitotic DNA replication at ribosomal DNA","type":"exact"},{"name":"reduced mitotic DNA replication at rDNA","type":"exact"}],"termid":"FYPO:0006860"}


id: GO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = D-ribose 1,5-diphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.18","RHEA:21216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"phosphoribokinase activity","secondary_identifiers":["MetaCyc:PHOSPHORIBOKINASE-RXN","KEGG_REACTION:R01050"],"synonyms":[{"name":"ATP:D-ribose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphoribokinase (phosphorylating)","type":"related"}],"termid":"GO:0050195"}


id: SO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of an mRNA substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_read","synonyms":[{"name":"mRNA read","type":"exact"}],"termid":"SO:0001827"}


id: GO:0015351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bilirubin from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilirubin transmembrane transporter activity","termid":"GO:0015127"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"bilirubin secondary active transmembrane transporter activity","synonyms":[{"name":"bilirubin porter activity","type":"related"},{"name":"bilitranslocase","type":"narrow"}],"termid":"GO:0015351"}


id: PBO:0016042
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PTBP3","termid":"PBO:0016042"}


id: PBO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-endonuclease Apn2","termid":"PBO:0003563"}


id: GO:0021566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypoglossal nerve over time, from its formation to the mature structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["ISBN:0838580343","GOC:dph","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve development","synonyms":[{"name":"CN XII development","type":"related"},{"name":"cranial nerve 12 development","type":"related"},{"name":"cranial nerve XII development","type":"exact"}],"termid":"GO:0021566"}


id: FYPO:0003109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere during vegetative growth","termid":"FYPO:0003108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to telomere during vegetative growth","synonyms":[{"name":"abolished protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abolished protein localisation to telomere during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abolished protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"protein absent from telomere during vegetative growth","type":"related"},{"name":"protein localization to telomere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003109"}


id: PBO:0038408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_agent_in_process","termid":"PBO:0038408"}


id: PBO:0079233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 8","termid":"PBO:0079233"}


id: PR:000044737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 5 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:28367989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"S5P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:3","type":"exact"},{"name":"rpb1/Phos(CTD-S5)","type":"exact"}],"termid":"PR:000044737"}


id: PBO:0055541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2977","termid":"PBO:0055541"}


id: PBO:0082911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteinyl-tRNA synthetase; CRS1 has two in-frame start codons resulting in a shorter isoform that is retained in the cytosol and a longer form that is mitochondrial; may interact with ribosomes, based on co-purification experiments; human gene CARS allows growth of the yeast haploid null mutant after sporulation of a heterozygous diploid","termid":"PBO:0082911"}


id: GO:0009543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cavity enclosed within the chloroplast thylakoid membrane. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0943088399","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid lumen","termid":"GO:0031978"},{"relation_name":"part_of","term_name":"chloroplast thylakoid","termid":"GO:0009534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid lumen","termid":"GO:0009543"}


id: PBO:0030658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Man9GlcNAc_level","termid":"PBO:0030658"}


id: GO:0052133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in host (obsolete GO:0052133)","synonyms":[{"name":"positive aerotaxis within host","type":"exact"}],"termid":"GO:0052133"}


id: PBO:0049777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 5","termid":"PBO:0049777"}


id: PR:Q9UTS5-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-2.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-2"],"synonyms":[{"name":"Spom972h-zas1/iso:2","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-2"}


id: PATO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's participation in movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"movement quality","termid":"PATO:0001906"}


id: MOD:00506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(5) HexNAc(2)","definition_xrefs":["PubMed:111247","PubMed:1694179","Unimod:137#N","RESID:AA0151#var","PubMed:5490222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-linked glycan core N4-glycosylated asparagine","synonyms":[{"name":"Hex(5)HexNAc(2)","type":"related"},{"name":"N-linked glycan core","type":"related"}],"termid":"MOD:00506"}


id: PBO:0068021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 326","termid":"PBO:0068021"}


id: GO:0102395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-cis-beta-carotene + O2 = 9-cis-10'-apo-beta-carotenal + beta-ionone.","definition_xrefs":["EC:1.13.11.68","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9-cis-beta-carotene 9',10'-cleavage oxygenase activity","secondary_identifiers":["MetaCyc:RXN-13642","RHEA:34399"],"termid":"GO:0102395"}


id: FYPO:0000538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein secretion is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein secretion during vegetative growth","synonyms":[{"name":"decreased protein secretion during mitotic cell cycle","type":"related"},{"name":"protein secretion: decreased","type":"related"},{"name":"reduced protein secretion during vegetative growth","type":"exact"}],"termid":"FYPO:0000538"}


id: GO:0006353
data:
  {"annotated_genes":["SJAG_04006","SJAG_03624","SJAG_04942","SJAG_00637","SJAG_02691","SJAG_02242","SJAG_01713","SJAG_03689","SJAG_03761","SJAG_02922","SJAG_04855","SJAG_03923","SJAG_02037","SJAG_01707","SJAG_04106","SJAG_03179","SJAG_02156","SJAG_03126","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108127],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[110373,112137,92556,98435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006363"},{"annotations":[72494,93369,89008,103959,112138,96030,103863,94310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006369"},{"annotations":[98330,93428,103623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030847"},{"annotations":[94324,96031,112139,89192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006386"},{"annotations":[88818,114048],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031564"}]},"cv_name":"biological_process","definition":"The completion of transcription: the RNA polymerase pauses, the RNA-DNA hybrid dissociates, followed by the release of the RNA polymerase from its DNA template.","definition_xrefs":["PMID:15020047","PMID:18280161","PMID:30978344","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_01707":null,"SJAG_01713":null,"SJAG_02037":null,"SJAG_02156":null,"SJAG_02242":null,"SJAG_02691":null,"SJAG_02922":null,"SJAG_03126":null,"SJAG_03179":null,"SJAG_03624":null,"SJAG_03689":null,"SJAG_03761":null,"SJAG_03923":null,"SJAG_04006":null,"SJAG_04106":null,"SJAG_04527":null,"SJAG_04855":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"DNA-templated transcription termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001125"],"synonyms":[{"name":"DNA-dependent transcription, termination","type":"exact"},{"name":"DNA-templated transcription, termination","type":"exact"},{"name":"termination of DNA-dependent transcription","type":"exact"},{"name":"termination of transcription, DNA-dependent","type":"exact"},{"name":"transcription termination factor activity","type":"related"},{"name":"transcription termination from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription termination, DNA-dependent","type":"related"},{"name":"transcriptional complex disassembly","type":"broad"}],"termid":"GO:0006353","terms_by_termid":{"GO:0006363":null,"GO:0006369":null,"GO:0006386":null,"GO:0030847":null,"GO:0031564":null,"GO:1904595":null}}


id: PBO:0079752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 1 like 1","termid":"PBO:0079752"}


id: GO:0006551
data:
  {"annotated_genes":["SJAG_03243","SJAG_03562","SJAG_02841","SJAG_04098","SJAG_03985","SJAG_06635","SJAG_00396","SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107260],"is_not":false,"summary":null,"term":"GO:0006551"},{"annotations":[106606,109421,96980,102335,86881,99455,106245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-leucine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-leucine metabolism","type":"exact"},{"name":"leucine metabolic process","type":"broad"}],"termid":"GO:0006551","terms_by_termid":{"GO:0006551":null,"GO:0009098":null}}


id: PBO:0045069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 1","termid":"PBO:0045069"}


id: PBO:0041972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 2","termid":"PBO:0041972"}


id: GO:2000212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"negatively_regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of glutamate metabolic process","synonyms":[{"name":"negative regulation of glutamate metabolism","type":"exact"},{"name":"negative regulation of glutamic acid metabolic process","type":"exact"},{"name":"negative regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000212"}


id: PR:O74754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit gamma, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.13","secondary_identifiers":["UniProtKB:O74754"],"synonyms":[{"name":"F-ATPase gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5C1","type":"exact"}],"termid":"PR:O74754"}


id: PBO:0068741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 4, pseudogene","termid":"PBO:0068741"}


id: PBO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Batten's disease","termid":"PBO:0001312"}


id: PBO:0089892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sugar transporter family","termid":"PBO:0089892"}


id: SO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a translational start codon of CUG.","definition_xrefs":["SO:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_non_canonical_start_codon","termid":"SO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_start_codon_CUG","synonyms":[{"name":"gene with start codon CUG","type":"exact"}],"termid":"SO:0001740"}


id: MOD:01757
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01757"}


id: PATO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Multipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipotent","termid":"PATO:0001402"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: GO:0046772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The envelopment of a virus, in which the naked capsid evaginates from the host outer nuclear membrane system, thus acquiring a membrane envelope.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding from nuclear membrane","termid":"GO:0046765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from outer nuclear membrane","synonyms":[{"name":"outer nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from outer nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from outer nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from outer nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046772"}


id: PBO:0040543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GAT1 divergent transcript","termid":"PBO:0040543"}


id: PBO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc2 family (predicted)","termid":"PBO:0002768"}


id: PBO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc2 (predicted)","termid":"PBO:0002273"}


id: PBO:0087801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; substrate of the phosphatase calcineurin; interacts with homolog Frt2p; promotes cell growth in stress conditions, possibly via a role in posttranslational translocation; FRT1 has a paralog, FRT2, that arose from the whole genome duplication","termid":"PBO:0087801"}


id: PBO:0017742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase","termid":"PBO:0017742"}


id: PR:O59932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght4 gene.","definition_xrefs":["UniProtKB:O59932","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.08","synonyms":[{"name":"Spom972h-ght4","type":"exact"},{"name":"hexose transporter 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59932"}


id: PR:Q09838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:12637524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulator prz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.13c","secondary_identifiers":["PR:000027514","UniProtKB:Q09838"],"synonyms":[{"name":"SPAC4G8.13C","type":"related"},{"name":"Spom972h-prz1","type":"exact"}],"termid":"PR:Q09838"}


id: PBO:0082789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TREX complex required for nuclear mRNA export; member of the DEAD-box RNA helicase superfamily and is involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0082789"}


id: PBO:0055777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lon peptidase 1, mitochondrial","termid":"PBO:0055777"}


id: PBO:0044145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 11","termid":"PBO:0044145"}


id: PBO:0058787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7156","termid":"PBO:0058787"}


id: PBO:0063463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor alpha","termid":"PBO:0063463"}


id: PBO:0065868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB25, member RAS oncogene family","termid":"PBO:0065868"}


id: GO:0140366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-stoichiometric protein complex formed by several galectins crosslinking glycosylated ligands to form a dynamic lattice. The galectin lattice modulates receptor kinase signaling and the functionality of membrane receptors, by regulating the diffusion, compartmentalization and endocytosis of plasma membrane glycoproteins and glycolipids.","definition_xrefs":["PMID:30951647","PMID:28893908","PMID:26092931","PMID:19021578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"galectin lattice","termid":"GO:0140366"}


id: PBO:0049054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 53, pseudogene","termid":"PBO:0049054"}


id: PBO:0047846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 2","termid":"PBO:0047846"}


id: PBO:0079304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2","termid":"PBO:0079304"}


id: GO:0035168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the larval lymph gland acquires the specialized features of a mature hemocyte. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf","PMID:14602069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"},{"relation_name":"part_of","term_name":"larval lymph gland hemopoiesis","termid":"GO:0035167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval lymph gland hemocyte differentiation","synonyms":[{"name":"larval lymph gland arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0035168"}


id: GO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta2 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-9 complex","synonyms":[{"name":"laminin-421 complex","type":"exact"}],"termid":"GO:0043258"}


id: PBO:0045577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase","termid":"PBO:0045577"}


id: PBO:0091296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi BAR domain protein","termid":"PBO:0091296"}


id: PBO:0088585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex arrestin related endocytic adaptor ubunit Vps26","termid":"PBO:0088585"}


id: PBO:0039158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 5","termid":"PBO:0039158"}


id: MOD:01377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3R,4S)-4-hydroxyisoleucine.","definition_xrefs":["ChEBI:141844","PubMed:363352","RESID:AA0448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated isoleucine","termid":"MOD:01415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-4-hydroxyisoleucine","synonyms":[{"name":"(2S,3R,4S)-2-amino-3-methyl-4-hydroxyvaleric acid","type":"exact"},{"name":"(2S,3R,4S)-2-amino-4-hydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"(3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"gamma-hydroxyisoleucine","type":"exact"}],"termid":"MOD:01377"}


id: FYPO:0001003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during nitrogen starvation","synonyms":[{"name":"fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"small vacuoles present in greater numbers during nitrogen starvation","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen depletion","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen deprivation","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001003"}


id: GO:0036394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of amylase from a cell.","definition_xrefs":["GOC:jc","PMID:19028687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"amylase secretion","synonyms":[{"name":"amylase release","type":"exact"}],"termid":"GO:0036394"}


id: PBO:0055408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2838","termid":"PBO:0055408"}


id: PBO:0031807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_passage_through_START_of_mitotic_cell_cycle","termid":"PBO:0031807"}


id: PBO:0041338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 22","termid":"PBO:0041338"}


id: GO:0019716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The monomethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N-methyl-L-alanine.","definition_xrefs":["RESID:AA0061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine monomethylation","termid":"GO:0019716"}


id: GO:0031780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a corticotropin hormone receptor.","definition_xrefs":["GOC:dph","GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"corticotropin hormone receptor binding","secondary_identifiers":["GO:0071856"],"synonyms":[{"name":"ACTH receptor binding","type":"exact"},{"name":"adrenocorticotropic hormone receptor ligand","type":"narrow"},{"name":"adrenocorticotropin hormone receptor binding","type":"exact"},{"name":"adrenocorticotropin receptor binding","type":"exact"},{"name":"corticotropin receptor binding","type":"exact"}],"termid":"GO:0031780"}


id: PBO:0084538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms a heterotrimeric complex with Erp1, Erp2p, and Emp24,","termid":"PBO:0084538"}


id: GO:0045875
data:
  {"annotated_genes":["SJAG_01716","SJAG_00823","SJAG_01825","SJAG_00369","SJAG_05978","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102737,103567],"is_not":false,"summary":null,"term":"GO:0045875"},{"annotations":[111482,102506,102411,87913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sister chromatid cohesion","type":"exact"},{"name":"down-regulation of sister chromatid cohesion","type":"exact"},{"name":"downregulation of sister chromatid cohesion","type":"exact"},{"name":"inhibition of sister chromatid cohesion","type":"narrow"}],"termid":"GO:0045875","terms_by_termid":{"GO:0045875":null,"GO:1905412":null}}


id: GO:0102002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + 2 O2 + 2 NADPH(4-) + 2 H+ = (E)-2-methylpropanal oxime + 2 NADP(3-) + carbon dioxide + 3 H2O.","definition_xrefs":["EC:1.14.14.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"valine N-monooxygenase (oxime forming) activity","secondary_identifiers":["RHEA:28606","MetaCyc:1.14.13.118-RXN"],"termid":"GO:0102002"}


id: FYPO:0001466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration does not increase immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus","termid":"FYPO:0001463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"abolished immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"immediate intracellular calcium spike following extracellular calcium stimulus abolished","type":"exact"},{"name":"immediate intracellular calcium spike following extracellular calcium stimulus abolished during vegetative growth","type":"exact"},{"name":"immediate intracellular calcium spike following extracellular calcium stimulus absent","type":"exact"}],"termid":"FYPO:0001466"}


id: GO:1903103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of potassium:proton antiporter activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:21041667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"potassium:proton antiporter complex","termid":"GO:1903103"}


id: PBO:0076865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX13 family member C","termid":"PBO:0076865"}


id: PBO:0048153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1","termid":"PBO:0048153"}


id: PBO:0030485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transport","termid":"PBO:0030485"}


id: GO:0004145
data:
  {"annotated_genes":["SJAG_03288","SJAG_02296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83636,96775],"is_not":false,"summary":null,"term":"GO:0004145"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alkane-alpha,omega-diamine = CoA + an N-acetyldiamine.","definition_xrefs":["EC:2.3.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02296":null,"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"diamine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-351208","Reactome:R-HSA-351207","RHEA:25181","MetaCyc:DIAMACTRANS-RXN"],"synonyms":[{"name":"acetyl-CoA:alkane-alpha,omega-diamine N-acetyltransferase activity","type":"related"},{"name":"acetyl-coenzyme A-1,4-diaminobutane N-acetyltransferase activity","type":"narrow"},{"name":"diamine acetyltransferase activity","type":"exact"},{"name":"putrescine (diamine)-acetylating enzyme activity","type":"narrow"},{"name":"putrescine N-acetyltransferase activity","type":"narrow"},{"name":"putrescine acetylase activity","type":"narrow"},{"name":"putrescine acetyltransferase activity","type":"narrow"},{"name":"spermidine N(1)-acetyltransferase activity","type":"narrow"},{"name":"spermidine N1-acetyltransferase activity","type":"related"},{"name":"spermidine acetyltransferase activity","type":"narrow"},{"name":"spermidine/spermine N1-acetyltransferase activity","type":"related"},{"name":"spermine N(1)-acetyltransferase","type":"narrow"},{"name":"spermine N-acetyltransferase","type":"related"},{"name":"spermine acetyltransferase","type":"narrow"}],"termid":"GO:0004145","terms_by_termid":{"GO:0004145":null}}


id: PR:Q10422
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25G10.01 gene.","definition_xrefs":["UniProtKB:Q10422","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C25G10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.01","synonyms":[{"name":"Spom972h-SPAC25G10.01","type":"exact"}],"termid":"PR:Q10422"}


id: PBO:0051364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-25 (pseudogene)","termid":"PBO:0051364"}


id: PBO:0090208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1","termid":"PBO:0090208"}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: PBO:0004609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp2","termid":"PBO:0004609"}


id: PBO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase family member 3, pseudogene","termid":"PBO:0048222"}


id: GO:1905886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any chromatin remodeling that is involved in meiosis I.","definition_xrefs":["GOC:TermGenie","PMID:19139281","PMID:25934010","GO_REF:0000060","PMID:9106659"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling involved in meiosis I (obsolete GO:1905886)","synonyms":[{"name":"chromatin modeling involved in meiosis I","type":"exact"},{"name":"chromatin modelling involved in meiosis I","type":"exact"},{"name":"chromatin remodelling involved in meiosis I","type":"exact"},{"name":"meiosis-specific chromatin remodeling","type":"exact"}],"termid":"GO:1905886"}


id: GO:0042868
data:
  {"annotated_genes":["SJAG_03680","SJAG_00266","SJAG_02621","SJAG_01176","SJAG_03745","SJAG_01717","SJAG_04574","SJAG_03047"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104133],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[106655,84597,88421,102419,98566,110154,114199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA metabolic process","termid":"GO:0034660"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01176":null,"SJAG_01717":null,"SJAG_02621":null,"SJAG_03047":null,"SJAG_03680":null,"SJAG_03745":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"antisense RNA metabolism","type":"exact"}],"termid":"GO:0042868","terms_by_termid":{"GO:0060195":null,"GO:0071040":null}}


id: MOD:01709
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01709"}


id: GO:0010650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"positively_regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by electrical coupling","termid":"GO:0010650"}


id: GO:0045143
data:
  {"annotated_genes":["SJAG_00418","SJAG_03327","SJAG_05019","SJAG_01082","SJAG_03048","SJAG_04259","SJAG_00727","SJAG_04143","SJAG_05266","SJAG_01777","SJAG_00756","SJAG_02814","SJAG_04623","SJAG_03698","SJAG_02606","SJAG_01805","SJAG_05295","SJAG_02104","SJAG_07002","SJAG_04950","SJAG_02731","SJAG_03437","SJAG_03681","SJAG_03680","SJAG_01211","SJAG_01224","SJAG_05226","SJAG_01601","SJAG_05196","SJAG_02346","SJAG_01538","SJAG_03942","SJAG_03092","SJAG_00229","SJAG_03926","SJAG_01775","SJAG_03220","SJAG_02286","SJAG_05319","SJAG_01873","SJAG_05260","SJAG_01837","SJAG_04076","SJAG_03217","SJAG_00918","SJAG_01263","SJAG_00600","SJAG_00794","SJAG_01371","SJAG_03685","SJAG_03989","SJAG_04457","SJAG_05220","SJAG_03287","SJAG_03683","SJAG_04126","SJAG_01278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85566,87964,89975,90059,106353,109395,110652,113825],"is_not":false,"summary":null,"term":"GO:0045143"},{"annotations":[109951,89974,84044,94789,111678,86487,103985,97485,113196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[83988,107387,103986,106721,89052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[85794,113197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[85965,102101],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[83627,96065,85966,98978,101253],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[109952,109396,97952,95287,89978,100650,110654,97428,103987,112050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[92890,112093,83628,113678,113813,102102],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[110153,102103],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[110658],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060629"},{"annotations":[106356,90064],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090006"},{"annotations":[98549],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"},{"annotations":[112832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[106526,103667,106065,113061,98596,94077,112075,91486,105054,91740,103989,94797,89991,110257,85950,101630,85350,97489,106485,105316,109399,87172,96672],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets.","definition_xrefs":["ISBN:0815316194","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00418":null,"SJAG_00600":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01538":null,"SJAG_01601":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_02104":null,"SJAG_02286":null,"SJAG_02346":null,"SJAG_02606":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03287":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03680":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04143":null,"SJAG_04259":null,"SJAG_04457":null,"SJAG_04623":null,"SJAG_04950":null,"SJAG_05019":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007061"],"synonyms":[{"name":"meiosis I, chromosome segregation","type":"exact"}],"termid":"GO:0045143","terms_by_termid":{"GO:0007129":null,"GO:0030999":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0045143":null,"GO:0051455":null,"GO:0060629":null,"GO:0062123":null,"GO:0070197":null,"GO:0090006":null,"GO:1904967":null,"GO:1990813":null}}


id: PBO:0052501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 13","termid":"PBO:0052501"}


id: PBO:0040466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP23 metallopeptidase and ATP synthase assembly factor homolog","termid":"PBO:0040466"}


id: PATO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being harmed or injured or spoiled, such that its functionality is impaired.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damage","termid":"PATO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damaged","termid":"PATO:0001167"}


id: PBO:0090991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1-like protein","termid":"PBO:0090991"}


id: GO:0045656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte differentiation","termid":"GO:0002762"},{"relation_name":"is_a","term_name":"regulation of monocyte differentiation","termid":"GO:0045655"},{"relation_name":"negatively_regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte differentiation","synonyms":[{"name":"down regulation of monocyte differentiation","type":"exact"},{"name":"down-regulation of monocyte differentiation","type":"exact"},{"name":"downregulation of monocyte differentiation","type":"exact"},{"name":"inhibition of monocyte differentiation","type":"narrow"}],"termid":"GO:0045656"}


id: PATO:0000790
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000790 heart rate value (obsolete PATO:0000790)","termid":"PATO:0000790"}


id: PBO:0073429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 1","termid":"PBO:0073429"}


id: PBO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein (prediected)","termid":"PBO:0000451"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: PBO:0111424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo3","termid":"PBO:0111424"}


id: PBO:0069663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 940, pseudogene","termid":"PBO:0069663"}


id: PBO:0073556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 1","termid":"PBO:0073556"}


id: PATO:0002631
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence of a process during which time there is an inability to change the course, extent, or repetition of the process.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refractory","termid":"PATO:0002631"}


id: PBO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurs_in","termid":"PBO:0000008"}


id: PBO:0086300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in translation; forms a complex with Gir2p; has similarity to mammalian developmentally regulated GTP-binding protein","termid":"PBO:0086300"}


id: GO:0072089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell proliferation","termid":"GO:0072089"}


id: GO:2000316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 type immune response","synonyms":[{"name":"regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000316"}


id: PBO:0086208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with the large mitoribosomal subunit; abundance and relative nuclear distribution to the protein increases upon DNA replication stress; YDR132C has a paralog, YLR108C, that arose from the whole genome duplication","termid":"PBO:0086208"}


id: GO:0043906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ala-tRNA(Pro).","definition_xrefs":["GOC:jl","PMID:14663147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Ala-tRNA(Pro) hydrolase activity","synonyms":[{"name":"Ala-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043906"}


id: GO:0097099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.","definition_xrefs":["GOC:jj","Wikipedia:Albumen"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of albumen","synonyms":[{"name":"structural constituent of egg white","type":"exact"}],"termid":"GO:0097099"}


id: GO:0043520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"regulates","term_name":"myosin II filament assembly","termid":"GO:0031036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of myosin II filament assembly","termid":"GO:0043520"}


id: PBO:0051580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor D","termid":"PBO:0051580"}


id: GO:0052402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the resistance gene-dependent defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont resistance gene-dependent defense response (obsolete GO:0052402)","synonyms":[{"name":"activation by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"activation by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"activation by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"activation by organism of symbiont resistance gene-dependent defense response","type":"exact"},{"name":"induction by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"induction by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"induction by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"induction by organism of symbiont resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052402"}


id: PBO:0087580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the anaphase-promoting complex/cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; required for sporulation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087580"}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: GO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An specialized occluding junction where three epithelial cells meet. It is composed of a branching network of sealing strands that run perpendicularly to the bicellular tight junction at the point of contact between three epithelial cells in an epithelial sheet.","definition_xrefs":["GOC:dk","GOC:dph","PMID:25822906","PMID:22520461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tricellular tight junction","termid":"GO:0061689"}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: PBO:0083623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to monoubiquitinate PCNA-K164; heterodimer binds single-stranded DNA and has single-stranded DNA dependent ATPase activity; required for postreplication repair; SUMO-targeted ubiquitin ligase (STUbl) that contains a SUMO-interacting motif (SIM) which stimulates its ubiquitin ligase activity towards the sumoylated form of PCNA","termid":"PBO:0083623"}


id: PBO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035932"}


id: PBO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_organization","termid":"PBO:0030727"}


id: PBO:0030376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_anisomycin","termid":"PBO:0030376"}


id: PBO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP receptor, synaptobrevin family","termid":"PBO:0001976"}


id: FYPO:0002046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to stress","synonyms":[{"name":"increased cell population growth during cellular response to stress","type":"exact"},{"name":"increased growth during cellular response to stress","type":"exact"},{"name":"resistant to stress","type":"exact"},{"name":"stress resistance: increased","type":"related"}],"termid":"FYPO:0002046"}


id: PBO:0068991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 235, pseudogene","termid":"PBO:0068991"}


id: PBO:0045370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 5","termid":"PBO:0045370"}


id: PBO:0070092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 6 pseudogene","termid":"PBO:0070092"}


id: PR:O13913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.07 gene.","definition_xrefs":["UniProtKB:O13913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.07","synonyms":[{"name":"Spom972h-SPAC23C11.07","type":"exact"}],"termid":"PR:O13913"}


id: GO:0050697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trichloroethene + 2 H+ + 2 e- = HCl + 1,2-dichloroethene.","definition_xrefs":["UM-BBD_enzymeID:e0271","MetaCyc:TCEREDCHLOR-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,1,2-trichloroethene reductive dehalogenase activity","synonyms":[{"name":"1,1,2-trichloroethylene reductive dehalogenase activity","type":"exact"},{"name":"TCE-reductive dehalogenase activity","type":"exact"}],"termid":"GO:0050697"}


id: SO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant in the genetic material inherited from the father.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal_variant","synonyms":[{"name":"paternal variant","type":"exact"}],"termid":"SO:0001776"}


id: PBO:0090072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase Npt1","termid":"PBO:0090072"}


id: GO:0030719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of polar granules, cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.","definition_xrefs":["PMID:10851135","PMID:770367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"P granule organization","secondary_identifiers":["GO:0048114"],"synonyms":[{"name":"P granule organization and biogenesis","type":"related"},{"name":"polar granule organisation","type":"exact"},{"name":"polar granule organization and biogenesis","type":"exact"}],"termid":"GO:0030719"}


id: PBO:0040241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 2A","termid":"PBO:0040241"}


id: GO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT) mediated by B cells.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction in mucosal-associated lymphoid tissue","termid":"GO:0002401"},{"relation_name":"is_a","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"B cell tolerance induction in MALT","type":"exact"}],"termid":"GO:0002402"}


id: _global:is_measurement_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_measurement_of","termid":"_global:is_measurement_of"}


id: GO:0031859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a platelet activating factor receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"platelet activating factor receptor binding","synonyms":[{"name":"platelet activating factor receptor ligand","type":"narrow"}],"termid":"GO:0031859"}


id: PBO:0042990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 3","termid":"PBO:0042990"}


id: PBO:0050951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon beta 1","termid":"PBO:0050951"}


id: GO:1902807
data:
  {"annotated_genes":["SJAG_01210","SJAG_01401","SJAG_02026","SJAG_03681","SJAG_05346","SJAG_03591","SJAG_00991","SJAG_00996","SJAG_00071","SJAG_00169","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85155,105056,112051,97778,98517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[105847,87485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[85156,95037,105057,89499,87912,88334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"negatively_regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02026":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"down-regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"downregulation of cell cycle G1/S phase transition","type":"exact"},{"name":"inhibition of cell cycle G1/S phase transition","type":"narrow"}],"termid":"GO:1902807","terms_by_termid":{"GO:0031568":null,"GO:0031571":null,"GO:2000134":null}}


id: GO:1900897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane biosynthetic process","termid":"GO:1900896"},{"relation_name":"is_a","term_name":"negative regulation of heptadecane metabolic process","termid":"GO:1900900"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"negatively_regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heptadecane biosynthetic process","synonyms":[{"name":"down regulation of heptadecane anabolism","type":"related"},{"name":"down regulation of heptadecane biosynthesis","type":"related"},{"name":"down regulation of heptadecane biosynthetic process","type":"exact"},{"name":"down regulation of heptadecane formation","type":"related"},{"name":"down regulation of heptadecane synthesis","type":"related"},{"name":"down-regulation of heptadecane anabolism","type":"related"},{"name":"down-regulation of heptadecane biosynthesis","type":"related"},{"name":"down-regulation of heptadecane biosynthetic process","type":"exact"},{"name":"down-regulation of heptadecane formation","type":"related"},{"name":"down-regulation of heptadecane synthesis","type":"related"},{"name":"downregulation of heptadecane anabolism","type":"related"},{"name":"downregulation of heptadecane biosynthesis","type":"related"},{"name":"downregulation of heptadecane biosynthetic process","type":"exact"},{"name":"downregulation of heptadecane formation","type":"related"},{"name":"downregulation of heptadecane synthesis","type":"related"},{"name":"inhibition of heptadecane anabolism","type":"narrow"},{"name":"inhibition of heptadecane biosynthesis","type":"narrow"},{"name":"inhibition of heptadecane biosynthetic process","type":"narrow"},{"name":"inhibition of heptadecane formation","type":"narrow"},{"name":"inhibition of heptadecane synthesis","type":"narrow"},{"name":"negative regulation of heptadecane anabolism","type":"related"},{"name":"negative regulation of heptadecane biosynthesis","type":"related"},{"name":"negative regulation of heptadecane formation","type":"related"},{"name":"negative regulation of heptadecane synthesis","type":"related"}],"termid":"GO:1900897"}


id: GO:0031942
data:
  {"annotated_genes":["SJAG_00354","SJAG_01816"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97253,114837],"is_not":false,"summary":null,"term":"GO:0031942"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane whose catalytic residues lie on the intermembrane space side of the inner membrane; involved in mitochondrial protein turnover. Contains a subunit belonging to the AAA family of ATP-dependent metalloproteases.","definition_xrefs":["PMID:16247555","PMID:16267274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"i-AAA complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031942","terms_by_termid":{"GO:0031942":null}}


id: GO:0007248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Saccharomyces) (obsolete GO:0007248)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007248"}


id: GO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"positive regulation of epidermis development","termid":"GO:0045684"},{"relation_name":"positively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal cell differentiation","synonyms":[{"name":"activation of epidermal cell differentiation","type":"narrow"},{"name":"positive regulation of hypodermal cell differentiation","type":"related"},{"name":"stimulation of epidermal cell differentiation","type":"narrow"},{"name":"up regulation of epidermal cell differentiation","type":"exact"},{"name":"up-regulation of epidermal cell differentiation","type":"exact"},{"name":"upregulation of epidermal cell differentiation","type":"exact"}],"termid":"GO:0045606"}


id: SO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5' most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_clip","synonyms":[{"name":"5' clip","type":"related"},{"name":"five prime clip","type":"exact"}],"termid":"SO:0000555"}


id: GO:0038178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a C5a component of the complement pathway binding to a complement receptor, and ending with regulation of a downstream cellular process. C5a is a peptide derived from the C5 complement factor.","definition_xrefs":["GOC:jc","Wikipedia:Complement_component_5a","PMID:15313431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor mediated signaling pathway","termid":"GO:0002430"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"complement component C5a signaling pathway","synonyms":[{"name":"complement component C5a-induced signaling pathway","type":"exact"}],"termid":"GO:0038178"}


id: RO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulated_by","termid":"RO:0002022"}


id: SO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Conserved_region"],"synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:conserved_region","type":"exact"},{"name":"conserved region","type":"exact"}],"termid":"SO:0000330"}


id: GO:0150004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the dendritic spine neck where the spine arises from the dendritic shaft.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:9030614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine neck","termid":"GO:0044326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine origin","termid":"GO:0150004"}


id: GO:1903992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein stabilization.","definition_xrefs":["PMID:18573880","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein stabilization (obsolete GO:1903992)","synonyms":[{"name":"regulation of lysosomal protein stabilization","type":"narrow"},{"name":"regulation of positive regulation of protein stability","type":"exact"},{"name":"regulation of protein sequestering","type":"related"},{"name":"regulation of protein stabilization","type":"exact"},{"name":"regulation of protein stabilization activity","type":"related"}],"termid":"GO:1903992"}


id: PBO:0046135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A","termid":"PBO:0046135"}


id: PBO:0078583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 56","termid":"PBO:0078583"}


id: PBO:0087360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spore-specific water channel; mediates the transport of water across cell membranes, developmentally controlled; may play a role in spore maturation, probably by allowing water outflow, may be involved in freeze tolerance","termid":"PBO:0087360"}


id: GO:0015761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which mannose is transported across a lipid bilayer, from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mannose transmembrane transport","synonyms":[{"name":"mannose transport","type":"related"}],"termid":"GO:0015761"}


id: PBO:0059446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A19, pseudogene","termid":"PBO:0059446"}


id: FYPO:0005441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase","type":"exact"},{"name":"abolished protein localization to microtubule during interphase during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein absent from microtubule during mitotic interphase","type":"related"},{"name":"protein localization to microtubule abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0005441"}


id: PBO:0065383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 10, pseudogene","termid":"PBO:0065383"}


id: GO:0018622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorophenylacetate + NADH + O2 = 3,4-dihydroxyphenylacetate + chloride + NAD+.","definition_xrefs":["EC:1.14.12.9","RHEA:14689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-chlorophenylacetate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.12.9-RXN","UM-BBD_reactionID:r0308","KEGG_REACTION:R03306"],"synonyms":[{"name":"4-chlorophenylacetate,NADH:oxygen oxidoreductase (3,4-hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018622"}


id: PBO:0043250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 9","termid":"PBO:0043250"}


id: PBO:0056505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K12 binding inhibitory protein 1","termid":"PBO:0056505"}


id: PBO:0039956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL2-SNX15 readthrough (NMD candidate)","termid":"PBO:0039956"}


id: _global:transcribed_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is transcribed_from Y if X is synthesized from template Y.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"_global:transcribed_from"}


id: PBO:0054767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2179","termid":"PBO:0054767"}


id: GO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha2-beta1 integrin complex bound to a type VI collagen triple helix containing an alpha3(VI) chain.","definition_xrefs":["PMID:8387021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha2-beta1 integrin-alpha3(VI) complex","synonyms":[{"name":"ITGA2-ITGB1-COL6A3 complex","type":"narrow"}],"termid":"GO:0070466"}


id: PBO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrolectin","termid":"PBO:0043042"}


id: PBO:0065473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 11","termid":"PBO:0065473"}


id: PBO:0044980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 33","termid":"PBO:0044980"}


id: GO:0070092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of glucagon secretion","termid":"GO:0070092"}


id: GO:0043010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye development","secondary_identifiers":["GO:0001747","GO:0031075"],"termid":"GO:0043010"}


id: PBO:0051769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 13","termid":"PBO:0051769"}


id: FYPO:0001524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-thialysine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to L-thialysine","synonyms":[{"name":"resistance to L-thialysine during mitotic cell cycle","type":"related"},{"name":"resistance to L-thialysine during vegetative growth","type":"exact"},{"name":"resistance to thialysine","type":"broad"},{"name":"resistant to L-thialysine","type":"exact"}],"termid":"FYPO:0001524"}


id: PBO:0060145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription rescue factor 1","termid":"PBO:0060145"}


id: GO:0048942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a glial cell in the posterior lateral line nerve are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048942"}


id: FYPO:0004836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein oxidation during mitotic cell cycle","type":"related"},{"name":"reduced protein oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004836"}


