# terms

id: PBO:0034631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_level","termid":"PBO:0034631"}


id: GO:0018681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 deisopropylatrazine + O2 = 2 acetaldehyde + 2 deisopropyldeethylatrazine.","definition_xrefs":["KEGG_REACTION:R05567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"deisopropylatrazine monooxygenase activity","secondary_identifiers":["EC:1.14.15.-"],"termid":"GO:0018681"}


id: PBO:0027224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_division_timing_change_upon_nitrogen_source_shift","termid":"PBO:0027224"}


id: GO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell proliferation","synonyms":[{"name":"down regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"down-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"downregulation of alpha-beta T cell proliferation","type":"exact"},{"name":"inhibition of alpha-beta T cell proliferation","type":"narrow"},{"name":"negative regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046642"}


id: GO:0002848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immune response to tumor cell","termid":"GO:0002842"},{"relation_name":"is_a","term_name":"positive regulation of tolerance induction to tumor cell","termid":"GO:0002845"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"},{"relation_name":"is_a","term_name":"positive regulation of peripheral T cell tolerance induction","termid":"GO:0002851"},{"relation_name":"positively_regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell tolerance induction to tumor cell","synonyms":[{"name":"activation of T cell tolerance induction to tumor cell","type":"narrow"},{"name":"stimulation of T cell tolerance induction to tumor cell","type":"narrow"},{"name":"up regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"up-regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"upregulation of T cell tolerance induction to tumor cell","type":"exact"}],"termid":"GO:0002848"}


id: PBO:0076466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWIST1 associated long noncoding RNA regulated by androgen receptor","termid":"PBO:0076466"}


id: GO:0044681
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of two polypeptides which form a dodecamer (A6B6). Catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde. This reaction is involved in coenzyme M biosynthesis.","definition_xrefs":["GOC:mengo_curators","PMID:10940029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sulfopyruvate decarboxylase complex","termid":"GO:0044681"}


id: GO:1902584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to water deprivation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24198318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"positively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to water deprivation","synonyms":[{"name":"activation of drought tolerance","type":"related"},{"name":"activation of response to dehydration","type":"narrow"},{"name":"activation of response to drought","type":"narrow"},{"name":"activation of response to thirst","type":"narrow"},{"name":"activation of response to water deprivation","type":"narrow"},{"name":"positive regulation of drought tolerance","type":"related"},{"name":"positive regulation of response to dehydration","type":"exact"},{"name":"positive regulation of response to drought","type":"exact"},{"name":"positive regulation of response to thirst","type":"exact"},{"name":"up regulation of drought tolerance","type":"related"},{"name":"up regulation of response to dehydration","type":"exact"},{"name":"up regulation of response to drought","type":"exact"},{"name":"up regulation of response to thirst","type":"exact"},{"name":"up regulation of response to water deprivation","type":"exact"},{"name":"up-regulation of drought tolerance","type":"related"},{"name":"up-regulation of response to dehydration","type":"exact"},{"name":"up-regulation of response to drought","type":"exact"},{"name":"up-regulation of response to thirst","type":"exact"},{"name":"up-regulation of response to water deprivation","type":"exact"},{"name":"upregulation of drought tolerance","type":"related"},{"name":"upregulation of response to dehydration","type":"exact"},{"name":"upregulation of response to drought","type":"exact"},{"name":"upregulation of response to thirst","type":"exact"},{"name":"upregulation of response to water deprivation","type":"exact"}],"termid":"GO:1902584"}


id: PBO:0068619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 71, pseudogene","termid":"PBO:0068619"}


id: GO:0061222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesonephric mesenchymal cell population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"is_a","term_name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell proliferation involved in mesonephros development","termid":"GO:0061222"}


id: PBO:0082036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase; vacuolar membrane kinase that generates phosphatidylinositol (3,5)P2, which is involved in vacuolar sorting and homeostasis","termid":"PBO:0082036"}


id: FYPO:0007730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007730"}


id: PBO:0082362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific protein required for autophagosome formation; forms a complex with Atg17p and Atg29p that localizes other proteins to the pre-autophagosomal structure; constitutively phosphorylated, and phosphorylation of residue S174 is required for function; high-copy suppressor of CIK1 deletion","termid":"PBO:0082362"}


id: SO:1001264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoded_mRNA where translation was suspended at a particular codon and resumed at a particular non-overlapping downstream codon.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded_by_translational_bypass","termid":"SO:0000886"},{"relation_name":"is_a","term_name":"recoded_mRNA","termid":"SO:1001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_recoded_by_translational_bypass","synonyms":[{"name":"mRNA recoded by translational bypass","type":"exact"}],"termid":"SO:1001264"}


id: GO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a myeloid dendritic cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell cytokine production","termid":"GO:0002371"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}


id: PBO:0111328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Nop58","termid":"PBO:0111328"}


id: PBO:0065593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 9","termid":"PBO:0065593"}


id: PBO:0067695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 3","termid":"PBO:0067695"}


id: PBO:0042965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3","termid":"PBO:0042965"}


id: GO:0022866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables transfer of one electron across a membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","TC:5.B"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane 1-electron transfer carrier (obsolete GO:0022866)","synonyms":[{"name":"transmembrane one-electron transfer carrier","type":"exact"}],"termid":"GO:0022866"}


id: PBO:0031410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_vegetative_cell","termid":"PBO:0031410"}


id: PBO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin deacetylase Cda1","termid":"PBO:0002332"}


id: PATO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curvature","termid":"PATO:0001591"}


id: PBO:0059453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD3 pseudogene 1","termid":"PBO:0059453"}


id: PBO:0078943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 1-1","termid":"PBO:0078943"}


id: PBO:0039654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit sigma 2","termid":"PBO:0039654"}


id: GO:0010032
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108213],"is_not":false,"summary":null,"term":"GO:0010032"}]},"cv_name":"biological_process","definition":"Compaction of chromatin structure prior to meiosis in eukaryotic cells.","definition_xrefs":["PMID:10072401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome condensation involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0010032","terms_by_termid":{"GO:0010032":null}}


id: PBO:0066836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 135","termid":"PBO:0066836"}


id: GO:1900569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chanoclavine-I aldehyde. Chanoclavine-I aldehyde is at a branching point in the biosynthetic pathways of fumigaclavine C and ergotamine.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"chanoclavine-I aldehyde metabolic process","termid":"GO:1900567"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"chanoclavine-I aldehyde formation","type":"exact"},{"name":"chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900569"}


id: GO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["PMID:15541513","GOC:dgh","GO_REF:0000021","GOC:isa_complete","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary initiation","synonyms":[{"name":"MHB biosynthesis","type":"exact"},{"name":"MHB formation","type":"exact"},{"name":"isthmus biosynthesis","type":"related"},{"name":"isthmus formation","type":"related"},{"name":"midbrain-hindbrain boundary biosynthesis","type":"exact"},{"name":"midbrain-hindbrain boundary formation","type":"exact"}],"termid":"GO:0021547"}


id: PBO:0078428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 5-1","termid":"PBO:0078428"}


id: PBO:0086482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative neutral trehalase, required for thermotolerance; may mediate resistance to other cellular stresses; NTH2 has a paralog, NTH1, that arose from the whole genome duplication","termid":"PBO:0086482"}


id: GO:0098825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The guanylylation of peptidyl-histidine to form (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["RESID:AA0325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine guanylation","termid":"GO:0098825"}


id: PBO:0064363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMF1-BGLAP readthrough","termid":"PBO:0064363"}


id: PBO:0055118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2537","termid":"PBO:0055118"}


id: PBO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 28","termid":"PBO:0050172"}


id: GO:0061549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"},{"relation_name":"part_of","term_name":"sympathetic nervous system development","termid":"GO:0048485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic ganglion development","synonyms":[{"name":"sympathetic ganglia development","type":"related"}],"termid":"GO:0061549"}


id: PBO:0034073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_many_to_many_homology_relationship_with","termid":"PBO:0034073"}


id: GO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of metal ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metal ion homeostasis (obsolete GO:0055065)","termid":"GO:0055065"}


id: GO:0036270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diuretic stimulus. A diuretic is an agent that promotes the excretion of urine through its effects on kidney function.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diuretic","termid":"GO:0036270"}


id: PBO:0066590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member D","termid":"PBO:0066590"}


id: GO:1990808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-BAR domain of a protein, a domain of about 60 residues that occurs in a wide range of cytoskeletal proteins.","definition_xrefs":["PMID:20603077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"F-bar domain binding","termid":"GO:1990808"}


id: GO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with urotensin II to initiate a change in cell activity.","definition_xrefs":["PMID:15102493","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"urotensin II receptor activity","termid":"GO:0001604"}


id: PBO:0080833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 1","termid":"PBO:0080833"}


id: GO:0009594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a nutrient stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient","termid":"GO:0007584"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nutrient","synonyms":[{"name":"detection of nutrients","type":"exact"},{"name":"nutrient sensing","type":"related"},{"name":"perception of nutrients","type":"related"}],"termid":"GO:0009594"}


id: GO:0160178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transport of a dipeptide across a membrane; transport is independent of the movement of any other molecular species.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"dipeptide uniporter activity","termid":"GO:0160178"}


id: PBO:0080893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH domain family member 2 pseudogene 1","termid":"PBO:0080893"}


id: PBO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAB adaptor protein 1","termid":"PBO:0044520"}


id: PBO:0084187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus; component of the small subunit processome complex, which is required for processing of pre-18S rRNA; ortholog of mammalian fibrillarin; inviability of the null mutant is functionally complemented by human FBL","termid":"PBO:0084187"}


id: GO:0102289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-amyrin + 2 O2 + 2 NADPH + 2 H+ = 11-oxo-beta-amyrin + 3 H2O + 2 NADP.","definition_xrefs":["EC:1.14.14.152","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-amyrin 11-oxidase activity","secondary_identifiers":["MetaCyc:RXN-12680","RHEA:31711"],"termid":"GO:0102289"}


id: SO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic primary transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_dicistronic_transcript","termid":"SO:0000692"},{"relation_name":"transcribed_to","term_name":"dicistronic_primary_transcript","termid":"SO:1001197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_primary_transcript","synonyms":[{"name":"gene with dicistronic primary transcript","type":"exact"}],"termid":"SO:0000721"}


id: PBO:0067394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 499, pseudogene","termid":"PBO:0067394"}


id: PBO:0065355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 5","termid":"PBO:0065355"}


id: PBO:0088294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta catalytic subunit Rev3","termid":"PBO:0088294"}


id: GO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone H3 in which the lysine residue at position 9 has been modified by trimethylation.","definition_xrefs":["PMID:30110338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"H3K9me3 modified histone binding","termid":"GO:0062072"}


id: PBO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class I and II (predicted)","termid":"PBO:0001538"}


id: FYPO:0006761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased transcription during cellular response to hydroxyurea","synonyms":[{"name":"increased transcription during cellular response to HU","type":"exact"},{"name":"increased transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased transcription in response to HU","type":"exact"},{"name":"increased transcription in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006761"}


id: GO:0036446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a myofibroblast cell.","definition_xrefs":["CL:0000186","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast differentiation","synonyms":[{"name":"myofibroblast cell differentiation","type":"exact"}],"termid":"GO:0036446"}


id: PBO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z4","termid":"PBO:0000427"}


id: PBO:0091808
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans CAS5","termid":"PBO:0091808"}


id: GO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested lipids into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid digestion","termid":"GO:0044241"}


id: GO:0038170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by somatostatin binding to a somatostatin receptor (SSTR), and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:nhn","Wikipedia:Somatostatin","GOC:signaling","PMID:18006219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"somatostatin receptor signaling pathway","termid":"GO:0038169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"somatostatin signaling pathway","synonyms":[{"name":"SRIF signaling pathway","type":"exact"},{"name":"SST signaling pathway","type":"exact"},{"name":"somatostatin signalling pathway","type":"exact"},{"name":"somatostatin-activated somatostatin receptor signaling pathway","type":"exact"},{"name":"somatostatin-mediated signaling pathway","type":"exact"},{"name":"somatotrophin release inhibiting factor signaling pathway","type":"exact"}],"termid":"GO:0038170"}


id: SO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence motif is a short (up to 20 amino acids) region of biological interest. Such motifs, although they are too short to constitute functional domains, share sequence similarities and are conserved in different proteins. They display a common function (protein-binding, subcellular location etc.).","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_motif","secondary_identifiers":["BS:00032"],"synonyms":[{"name":"motif","type":"broad"},{"name":"polypeptide motif","type":"exact"}],"termid":"SO:0001067"}


id: GO:0018345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to a protein.","definition_xrefs":["GOC:jl","PMID:15520806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein palmitoylation","secondary_identifiers":["GO:0018318","GO:0018349"],"synonyms":[{"name":"protein amino acid palmitoylation","type":"exact"}],"termid":"GO:0018345"}


id: PBO:0081871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 813","termid":"PBO:0081871"}


id: GO:0140493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway acting on a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons. The partway stars with the conversion of an acyl-CoA to a trans-2-enoyl-CoA, catalyzed by acyl-CoA oxidase; the electrons removed by oxidation pass directly to oxygen and produce hydrogen peroxide, which is cleaved by peroxisomal catalases. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["PMID:32169171","PMID:17028011","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation using acyl-CoA oxidase","termid":"GO:0033540"},{"relation_name":"is_a","term_name":"very long-chain fatty acid catabolic process","termid":"GO:0042760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid beta-oxidation","termid":"GO:0140493"}


id: PR:O74760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14005:SF0","OMA:SCHPO03656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.05","secondary_identifiers":["UniProtKB:O74760"],"synonyms":[{"name":"Spom972h-EIF3A","type":"exact"},{"name":"eIF3 p110 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 110 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3, p110 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74760"}


id: PBO:0090976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit H","termid":"PBO:0090976"}


id: GO:0043845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcomplex of DNA polymerase III composed of the epsilon subunit which has proofreading activity, and the theta subunit which enhances the epsilon subunit's proofreading activity.","definition_xrefs":["PMID:16973612","Wikipedia:Pol_III"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III, core complex","termid":"GO:0044776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"DNA polymerase III, proofreading complex","synonyms":[{"name":"DNA polymerase III, proof-reading complex","type":"exact"},{"name":"DNA polymerase III, proof-reading subcomplex","type":"exact"},{"name":"DNA polymerase III, proofreading subcomplex","type":"exact"}],"termid":"GO:0043845"}


id: PBO:0082726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Ribosome Quality Control (RQC) complex;  RQC is a ribosome-bound complex required for degradation of polypeptides arising from stalled translation; recruits alanine- and threonine-charged tRNA to the A site and directs the elongation of nascent chains independently of mRNA or 40S subunits; monitors translation stress and signals this to Hsf1p","termid":"PBO:0082726"}


id: GO:0009195
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009195","terms_by_termid":{"GO:0006256":null}}


id: PBO:0027944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_segregation","termid":"PBO:0027944"}


id: GO:1901548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle lumen acidification.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle lumen acidification","termid":"GO:1901546"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle lumen acidification","termid":"GO:0097401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle lumen acidification","synonyms":[{"name":"activation of synaptic vesicle lumen acidification","type":"narrow"},{"name":"activation of synaptic vesicle lumen pH reduction","type":"narrow"},{"name":"positive regulation of proton loading","type":"exact"},{"name":"positive regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"up regulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"up regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"up-regulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"up-regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"upregulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"upregulation of synaptic vesicle lumen pH reduction","type":"exact"}],"termid":"GO:1901548"}


id: PBO:0051620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 2","termid":"PBO:0051620"}


id: PR:O14013
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.10","synonyms":[{"name":"Spom972h-rrn5","type":"exact"}],"termid":"PR:O14013"}


id: MOD:00360
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl copper sulfido molybdopterin cytosine dinuncleotide.","definition_xrefs":["PubMed:12475995","RESID:AA0355","Unimod:444#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl copper sulfido molybdopterin cytosine dinuncleotide","synonyms":[{"name":"CuSMo","type":"related"},{"name":"L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide","type":"exact"},{"name":"[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with cytosine)methyl-6-oxo-3,4-dimercapto-pteridino[6,7-5,6]pyranoato-S3,S4]-cysteinyl-S-copper-mu-sulfido-molybdenum hydroxide oxide","type":"exact"},{"name":"copper sulfido molybdopterin cytosine dinuncleotide","type":"related"},{"name":"cysteinyl copper mu-sulfido Mo-pterin cytosine dinucleotide","type":"exact"}],"termid":"MOD:00360"}


id: GO:0141107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a methyltransferase.","definition_xrefs":["PMID:34669960","PMID:15899842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"methyltransferase regulator activity","termid":"GO:0141107"}


id: GO:1990868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chemokine","termid":"GO:1990868"}


id: PR:Q9USI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15184401","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.05c","secondary_identifiers":["PR:000027729","UniProtKB:Q9USI6"],"synonyms":[{"name":"SPCC645.05C","type":"related"},{"name":"Spom972h-myo2","type":"exact"}],"termid":"PR:Q9USI6"}


id: GO:0021536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diencephalon development","termid":"GO:0021536"}


id: GO:0071934
data:
  {"annotated_genes":["SJAG_00835","SJAG_04673","SJAG_02962","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86347,86348,96831],"is_not":false,"summary":null,"term":"GO:0071934"},{"annotations":[99801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[96830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"}]},"cv_name":"biological_process","definition":"The process in which thiamine is transported across a membrane. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine transport","termid":"GO:0015888"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound transmembrane transport","termid":"GO:0072531"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"thiamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transmembrane transport","type":"exact"},{"name":"thiamine membrane transport","type":"exact"},{"name":"vitamin B1 transmembrane transport","type":"exact"}],"termid":"GO:0071934","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: GO:1900905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hexadecanal metabolic process","synonyms":[{"name":"regulation of hexadecanal metabolism","type":"exact"}],"termid":"GO:1900905"}


id: PBO:0017409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_improper_part","termid":"PBO:0017409"}


id: PBO:0077643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor necrosis factor","termid":"PBO:0077643"}


id: GO:0042303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic casting off and regeneration of an outer covering of cuticle, feathers, hair, horns, skin, etc.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle","termid":"GO:0042303"}


id: GO:0070553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with nicotinic acid to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:12522134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"nicotinic acid receptor activity","synonyms":[{"name":"niacin receptor activity","type":"exact"}],"termid":"GO:0070553"}


id: PBO:0028651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_precursor_level","termid":"PBO:0028651"}


id: GO:0090682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is responsible for the sense of bitter taste.","definition_xrefs":["GOC:hat","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bitter taste receptor activity","termid":"GO:0033038"},{"relation_name":"is_a","term_name":"GPCR taste receptor activity","termid":"GO:0090681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GPCR bitter taste receptor activity","synonyms":[{"name":"G protein-coupled receptor bitter taste receptor activity","type":"exact"},{"name":"G-protein coupled receptor bitter taste receptor activity","type":"exact"}],"termid":"GO:0090682"}


id: PBO:0004001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Ned8","termid":"PBO:0004001"}


id: PBO:0051098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin mu DNA binding protein 2","termid":"PBO:0051098"}


id: PBO:0089034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane malate/succinate:proton symporter Mae1","termid":"PBO:0089034"}


id: PBO:0036086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_heterochromatin_assembly","termid":"PBO:0036086"}


id: GO:1904927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a palmitoleic acid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25429233","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to palmitoleic acid","termid":"GO:1904926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to palmitoleic acid","termid":"GO:1904927"}


id: GO:1900070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["PMID:16278455","GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular hyperosmotic salinity response","termid":"GO:1900069"},{"relation_name":"is_a","term_name":"negative regulation of response to salt stress","termid":"GO:1901001"},{"relation_name":"negatively_regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"down regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"down-regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down-regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"downregulation of cellular hyperosmotic salinity response","type":"related"},{"name":"downregulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"inhibition of cellular hyperosmotic salinity response","type":"narrow"},{"name":"inhibition of cellular response to hyperosmotic salt stress","type":"narrow"},{"name":"negative regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900070"}


id: GO:0050529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + polyneuridine aldehyde = 16-epivellosimine + CO2 + methanol.","definition_xrefs":["EC:3.1.1.78","RHEA:17501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"polyneuridine-aldehyde esterase activity","secondary_identifiers":["KEGG_REACTION:R05825","MetaCyc:3.1.1.78-RXN"],"synonyms":[{"name":"PNAE activity","type":"related"},{"name":"polyneuridine aldehyde esterase activity","type":"related"},{"name":"polyneuridine aldehyde hydrolase (decarboxylating)","type":"related"}],"termid":"GO:0050529"}


id: PBO:0054732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2141","termid":"PBO:0054732"}


id: GO:0047816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + NAD+ = D-arabinono-1,4-lactone + NADH.","definition_xrefs":["EC:1.1.1.116","MetaCyc:D-ARABINOSE-1-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-arabinose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0045290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-arabinose 1-dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:20457"],"synonyms":[{"name":"D-arabinose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-pentose-dehydrogenase activity","type":"related"},{"name":"arabinose(fucose)dehydrogenase activity","type":"related"}],"termid":"GO:0047816"}


id: GO:0032400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"melanosome localization","synonyms":[{"name":"melanosome localisation","type":"exact"}],"termid":"GO:0032400"}


id: GO:0047774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = cis-2,3-dehydroacyl-CoA + NADPH.","definition_xrefs":["EC:1.3.1.37","MetaCyc:CIS-2-ENOYL-COA-REDUCTASE-NADPH-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-2-enoyl-CoA reductase (NADPH) activity","synonyms":[{"name":"NADPH-dependent cis-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ cis-2-oxidoreductase activity","type":"related"},{"name":"cis-2-enoyl-coenzyme A reductase activity","type":"related"},{"name":"reductase, cis-2-enoyl coenzyme A","type":"related"}],"termid":"GO:0047774"}


id: PATO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000812 odor acuity value (obsolete PATO:0000812)","termid":"PATO:0000812"}


id: PBO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, involved in translation initiation Psi1","termid":"PBO:0005792"}


id: PBO:0069815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1101, pseudogene","termid":"PBO:0069815"}


id: PBO:0066382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin pseudogene 2","termid":"PBO:0066382"}


id: PR:Q8NIL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized isomerase YddE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense-enhancing sequence 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.07","secondary_identifiers":["UniProtKB:Q8NIL3"],"synonyms":[{"name":"AES factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yddE","type":"exact"}],"termid":"PR:Q8NIL3"}


id: PBO:0063162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 7","termid":"PBO:0063162"}


id: GO:0047207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->2)-beta-D-fructosyl](n) + [(1->2)-beta-D-fructosyl](m) = [(1->2)-beta-D-fructosyl](n+1) + [(1->2)-beta-D-fructosyl](m-1).","definition_xrefs":["EC:2.4.1.100","MetaCyc:2.4.1.100-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1,2-beta-fructan 1F-fructosyltransferase activity","synonyms":[{"name":"1,2-beta-D-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan 1F-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"2,1-beta-D-fructan:2,1-beta-D-fructan 1-beta-D-fructosyltransferase activity","type":"related"},{"name":"2,1-fructan:2,1-fructan 1-fructosyltransferase activity","type":"related"},{"name":"FFT activity","type":"related"},{"name":"fructan:fructan fructosyl transferase activity","type":"related"}],"termid":"GO:0047207"}


id: GO:2000651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"positive regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000651"}


id: GO:0070900
data:
  {"annotated_genes":["SJAG_00255","SJAG_04113","SJAG_00865","SJAG_00358","SJAG_02302","SJAG_04367","SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[114726,110399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[90438,113101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[88978,104642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within a mitochondrial tRNA molecule to produce a mitochondrial tRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"},{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"},{"relation_name":"is_a","term_name":"mitochondrial RNA modification","termid":"GO:1900864"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00358":null,"SJAG_00865":null,"SJAG_02302":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070900","terms_by_termid":{"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:1990799":null}}


id: PBO:0059657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 23","termid":"PBO:0059657"}


id: GO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N2-methylguanine.","definition_xrefs":["PMID:17389639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"rRNA (guanine-N2-)-methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine-2-methyltransferase activity","type":"related"}],"termid":"GO:0008990"}


id: GO:0032887
data:
  {"annotated_genes":["SJAG_03048","SJAG_04464","SJAG_00244","SJAG_00082","SJAG_04597","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902845"},{"annotations":[86204,90586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[107182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032888"},{"annotations":[111200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule-based process","termid":"GO:0032886"},{"relation_name":"regulates","term_name":"spindle elongation","termid":"GO:0051231"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032887","terms_by_termid":{"GO:0032888":null,"GO:0110161":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null}}


id: PBO:0111426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo6","termid":"PBO:0111426"}


id: GO:0018336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-tyrosine to form peptidyl-dihydroxyphenylalanine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine hydroxylation","termid":"GO:0018336"}


id: PBO:0071066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 68","termid":"PBO:0071066"}


id: PBO:0048657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase","termid":"PBO:0048657"}


id: PBO:0039500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 23","termid":"PBO:0039500"}


id: PBO:0080825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAE1 maturation factor of ABCE1","termid":"PBO:0080825"}


id: PATO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000181 piloerection (obsolete PATO:0000181)","termid":"PATO:0000181"}


id: FYPO:0004006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to menadione is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during cellular response to menadione","synonyms":[{"name":"normal protein accumulation during cellular response to menadione","type":"related"},{"name":"normal protein level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to menadione during vegetative growth","type":"exact"}],"termid":"FYPO:0004006"}


id: PBO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_morphogenesis_of","termid":"PBO:0034421"}


id: GO:0019726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NADP+ = H+ + mevaldate + NADPH.","definition_xrefs":["EC:1.1.1.33","RHEA:20193"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADPH) activity (obsolete GO:0019726)","synonyms":[{"name":"(R)-mevalonate:NADP+ oxidoreductase","type":"related"},{"name":"mevaldate (reduced nicotinamide adenine dinucleotide phosphate) reductase","type":"related"}],"termid":"GO:0019726"}


id: GO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-CoA = acryloyl-CoA + NH3.","definition_xrefs":["MetaCyc:BETA-ALANYL-COA-AMMONIA-LYASE-RXN","EC:4.3.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"beta-alanyl-CoA ammonia-lyase activity","secondary_identifiers":["RHEA:12416"],"synonyms":[{"name":"b-alanyl-CoA ammonia-lyase activity","type":"exact"},{"name":"beta-alanyl coenzyme A ammonia-lyase activity","type":"related"},{"name":"beta-alanyl-CoA ammonia-lyase (acryloyl-CoA-forming)","type":"related"}],"termid":"GO:0047698"}


id: FYPO:0007452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends end of microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:15809031","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule end during mitotic interphase","termid":"FYPO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to microtubule plus-end","synonyms":[{"name":"normal protein localisation to microtubule plus-end","type":"exact"},{"name":"normal protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"normal protein localization to microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0007452"}


id: GO:0031861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prolactin-releasing peptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"prolactin-releasing peptide receptor binding","synonyms":[{"name":"prolactin-releasing peptide receptor ligand","type":"narrow"}],"termid":"GO:0031861"}


id: PBO:0080149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral anterior homeobox 1","termid":"PBO:0080149"}


id: PBO:0055641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3080","termid":"PBO:0055641"}


id: PBO:0060716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A6","termid":"PBO:0060716"}


id: PBO:0041363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 17","termid":"PBO:0041363"}


id: PBO:0040074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 2","termid":"PBO:0040074"}


id: PBO:0064515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 2","termid":"PBO:0064515"}


id: PBO:0011167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0011167"}


id: PATO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the synergistic strength of bond affinities between multiple bond interactions.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avidity","termid":"PATO:0002073"}


id: PBO:0072549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase domain containing 1","termid":"PBO:0072549"}


id: PBO:0077569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 275","termid":"PBO:0077569"}


id: GO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of receptor internalization.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"negative regulation of receptor-mediated endocytosis","termid":"GO:0048261"},{"relation_name":"negatively_regulates","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of receptor internalization","synonyms":[{"name":"down regulation of receptor internalization","type":"exact"},{"name":"down-regulation of receptor internalization","type":"exact"},{"name":"downregulation of receptor internalization","type":"exact"},{"name":"inhibition of receptor internalization","type":"narrow"}],"termid":"GO:0002091"}


id: PBO:0069387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 647, pseudogene","termid":"PBO:0069387"}


id: GO:0075135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction","termid":"GO:0075133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host calcium or calmodulin-mediated signal transduction","synonyms":[{"name":"disruption of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075135"}


id: FYECO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuCl2","synonyms":[{"name":"copper chloride added","type":"exact"}],"termid":"FYECO:0000184"}


id: PBO:0078981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 1-1","termid":"PBO:0078981"}


id: PBO:0049348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 6","termid":"PBO:0049348"}


id: GO:1990685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-lipid-RNA complex containing separate high-density lipoprotein (HDL), lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["PMID:21423178","GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid-RNA complex","termid":"GO:1990684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"HDL-containing protein-lipid-RNA complex","termid":"GO:1990685"}


id: PBO:0071638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 2","termid":"PBO:0071638"}


id: FYPO:0006698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular 5-phosphoribosyl diphosphate level","synonyms":[{"name":"decreased 5-phosphoribosyl diphosphate accumulation","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"decreased cellular PRPP level","type":"exact"},{"name":"reduced cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0006698"}


id: PBO:0041109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 2","termid":"PBO:0041109"}


id: PBO:0040073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRDC1 antisense RNA 1","termid":"PBO:0040073"}


id: PBO:0061977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AQ member 1 pseudogene","termid":"PBO:0061977"}


id: GO:0072244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular epithelium over time, from its formation to the mature structure. The metanephric glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus in the metanephros. The metanephric glomerular epithelium consists of both parietal and visceral epithelium. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelium development","termid":"GO:0072244"}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: SO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding asparaginyl tRNA (SO:0000256).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine_tRNA_primary_transcript","synonyms":[{"name":"asparagine tRNA primary transcript","type":"exact"}],"termid":"SO:0000213"}


id: GO:1903495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:3585228","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to dehydroepiandrosterone","termid":"GO:1903494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dehydroepiandrosterone","termid":"GO:1903495"}


id: GO:0010637
data:
  {"annotated_genes":["SJAG_00855","SJAG_00304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98203,102604],"is_not":false,"summary":null,"term":"GO:0010637"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial fusion","termid":"GO:0010635"},{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"negative regulation of mitochondrial fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010637","terms_by_termid":{"GO:0010637":null}}


id: PBO:0088839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog4","termid":"PBO:0088839"}


id: PBO:0078469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-7","termid":"PBO:0078469"}


id: PBO:0061988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 8 pseudogene","termid":"PBO:0061988"}


id: PATO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000251 startle reflex (obsolete PATO:0000251)","termid":"PATO:0000251"}


id: PBO:0065308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 27","termid":"PBO:0065308"}


id: PBO:0042398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codanin 1","termid":"PBO:0042398"}


id: PBO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_during_vegetative_growth","termid":"PBO:0036167"}


id: PBO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 3, pseudogene","termid":"PBO:0050638"}


id: FYPO:0000775
data:
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id: PBO:0071957
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id: GO:0090027
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id: FYPO:0004522
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id: PATO:0002429
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id: GO:0003092
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id: PBO:0043879
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id: GO:0042574
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id: PBO:0034463
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id: PR:O74954
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id: PBO:0081058
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id: PBO:0063648
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 5","termid":"PBO:0063648"}


id: GO:0051128
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id: GO:0050579
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deoxysarpagine + NADP+ = H+ + NADPH + vellosimine.","definition_xrefs":["RHEA:20029","EC:1.1.1.273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"vellosimine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05827","MetaCyc:1.1.1.273-RXN"],"synonyms":[{"name":"10-deoxysarpagine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050579"}


id: GO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type I hypersensitivity","termid":"GO:0001810"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type I hypersensitivity","synonyms":[{"name":"down regulation of type I hypersensitivity","type":"exact"},{"name":"down-regulation of type I hypersensitivity","type":"exact"},{"name":"downregulation of type I hypersensitivity","type":"exact"},{"name":"inhibition of type I hypersensitivity","type":"narrow"}],"termid":"GO:0001811"}


id: PBO:0045196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B7","termid":"PBO:0045196"}


id: PBO:0055810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1","termid":"PBO:0055810"}


id: PBO:0024800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_or_regulates","termid":"PBO:0024800"}


id: GO:0106319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4R)-limonene + NADH + H+ + O2 = NAD+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(R)-limonene 1,2-monooxygenase activity","termid":"GO:0018635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-limonene 1,2-monooxygenase NADH activity","secondary_identifiers":["EC:1.14.13.107"],"termid":"GO:0106319"}


id: PBO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein beta","termid":"PBO:0044008"}


id: GO:0007147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the second meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II","termid":"GO:0007135"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"female meiosis II","synonyms":[{"name":"female meiosis II nuclear division","type":"exact"}],"termid":"GO:0007147"}


id: PBO:0064751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 87","termid":"PBO:0064751"}


id: GO:0004900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with erythropoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"erythropoietin receptor activity","termid":"GO:0004900"}


id: PBO:0083398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF TPD3/YAL016W","termid":"PBO:0083398"}


id: FYPO:0001083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered polysaccharide level during vegetative growth","termid":"FYPO:0001085"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased polysaccharide level during vegetative growth","synonyms":[{"name":"increased cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"increased polysaccharide accumulation during vegetative growth","type":"related"},{"name":"increased polysaccharide level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001083"}


id: GO:0019020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of more than three sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete multipartite viral genome (obsolete GO:0019020)","termid":"GO:0019020"}


id: PBO:0015680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E, 4F complex E subunit isoform 2, stress response factor","termid":"PBO:0015680"}


id: GO:0009982
data:
  {"annotated_genes":["SJAG_01054","SJAG_04065","SJAG_01172","SJAG_00088","SJAG_02978","SJAG_04754","SJAG_00319","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87390,110454,113301],"is_not":false,"summary":null,"term":"GO:0009982"},{"annotations":[91533,102384,110456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[90833,108656,110457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"},{"annotations":[102385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[98650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in RNA = a pseudouridine in RNA. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:48348","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01054":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790905","Reactome:R-HSA-8870289","Reactome:R-HSA-6786583","Reactome:R-HSA-6782381","GO:0016439","Reactome:R-HSA-6787566"],"termid":"GO:0009982","terms_by_termid":{"GO:0009982":null,"GO:0106029":null,"GO:0106032":null,"GO:0160148":null,"GO:0160150":null}}


id: GO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","secondary_identifiers":["EC:1.20.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"narrow"}],"termid":"GO:0030613"}


id: PBO:0072895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C5-desaturase","termid":"PBO:0072895"}


id: PBO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0034022"}


id: PBO:0065700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine rich element binding protein B","termid":"PBO:0065700"}


id: PBO:0084705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis; involved in maturation of Grx5p and Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia","termid":"PBO:0084705"}


id: GO:0060540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the diaphragm are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ morphogenesis","termid":"GO:0048644"},{"relation_name":"part_of","term_name":"diaphragm development","termid":"GO:0060539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm morphogenesis","termid":"GO:0060540"}


id: PBO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Oma1 (predicted)","termid":"PBO:0001241"}


id: PBO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telobox motif","termid":"PBO:0001879"}


id: GO:0103063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(4-) + H2O + a trans-keto-C61-meroacyl-[acp] = diphosphoric acid + a trans-keto-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["EC:6.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"trans-keto-C61-meroacyl-AMP ligase activity","secondary_identifiers":["MetaCyc:RXN1G-4143"],"termid":"GO:0103063"}


id: GO:0098575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"lumenal side of lysosomal membrane","synonyms":[{"name":"internal leaflet of lysosomal membrane","type":"exact"},{"name":"internal side of lysosomal membrane","type":"exact"}],"termid":"GO:0098575"}


id: GO:0018656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-3,4-oxide.","definition_xrefs":["UM-BBD_reactionID:r0508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenanthrene 3,4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0018656"}


id: GO:0018271
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004077"},{"annotations":[104714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004078"},{"annotations":[104715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004079"},{"annotations":[104716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004080"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + protein = AMP + diphosphate + biotin-protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"biotin-protein ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2993799","Reactome:R-HSA-3323184","Reactome:R-HSA-9035990","Reactome:R-HSA-9035988","MetaCyc:BIOTINLIG-RXN","EC:6.3.4.-","Reactome:R-HSA-4167511","Reactome:R-HSA-2993802","Reactome:R-HSA-9035987","GO:0000106","Reactome:R-HSA-2993447","Reactome:R-HSA-2993814"],"synonyms":[{"name":"biotin-apoprotein ligase activity","type":"exact"}],"termid":"GO:0018271","terms_by_termid":{"GO:0004077":null,"GO:0004078":null,"GO:0004079":null,"GO:0004080":null}}


id: GO:0045496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the analia of the male over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:11494318","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia development","termid":"GO:0045496"}


id: PBO:0091584
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear Elongation and Deformation","termid":"PBO:0091584"}


id: PBO:0055725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 2","termid":"PBO:0055725"}


id: PBO:0080198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 6","termid":"PBO:0080198"}


id: GO:0033726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + 2 oxidized ferredoxin = an acid + 2 H+ + 2 reduced ferredoxin.","definition_xrefs":["EC:1.2.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldehyde ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:16421","MetaCyc:1.2.7.5-RXN"],"synonyms":[{"name":"AOR","type":"related"},{"name":"aldehyde:ferredoxin oxidoreductase activity","type":"related"},{"name":"tungsten-containing aldehyde ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0033726"}


id: PBO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, SGT2 family (predicted)","termid":"PBO:0002145"}


id: PBO:0089642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer delta subunit Ret2","termid":"PBO:0089642"}


id: GO:0140528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of a bilobe structure, a cytoskeletal structure in some kinetoplastid species linking the structures of the ciliary pocket collar and the flagellum attachment zone (aka cilium attachment zone).","definition_xrefs":["PMID:32675283","PMID:18443217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"bilobe structure assembly","synonyms":[{"name":"bilobe structure biogenesis","type":"exact"},{"name":"bilobe structure formation","type":"exact"},{"name":"kinetoplastid flagellar hook complex assembly","type":"exact"}],"termid":"GO:0140528"}


id: PBO:0074495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 23 pseudogene 1","termid":"PBO:0074495"}


id: PBO:0074181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 3","termid":"PBO:0074181"}


id: FYPO:0001573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to rapamycin is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to rapamycin","synonyms":[{"name":"increased RNA accumulation during cellular response to rapamycin","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to rapamycin","type":"narrow"},{"name":"increased transcript level during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0001573"}


id: PBO:0061385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 45","termid":"PBO:0061385"}


id: FYPO:0002706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cordycepin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to cordycepin","synonyms":[{"name":"resistance to cordycepin during mitotic cell cycle","type":"related"},{"name":"resistance to cordycepin during vegetative growth","type":"exact"},{"name":"resistant to cordycepin","type":"exact"}],"termid":"FYPO:0002706"}


id: PBO:0040651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1","termid":"PBO:0040651"}


id: PBO:0049498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 5, pseudogene","termid":"PBO:0049498"}


id: PBO:0072103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 1","termid":"PBO:0072103"}


id: PBO:0072447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 11","termid":"PBO:0072447"}


id: PBO:0082699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Mcm2-7 hexameric helicase complex; MCM2-7 primes origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation in S-phase; forms an Mcm4p-6p-7p subcomplex","termid":"PBO:0082699"}


id: GO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic A cell over time, from its formation to the mature structure. A pancreatic A cell is a cell in the pancreas that secretes glucagon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"part_of","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic A cell development","synonyms":[{"name":"pancreatic alpha cell development","type":"exact"}],"termid":"GO:0003322"}


id: PBO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21S rRNA","termid":"PBO:0005871"}


id: PBO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_mitotic_metaphase","termid":"PBO:0032719"}


id: PBO:0091375
data:
  {"annotation_feature_type":"gene","cv_name":"external_link","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the electron microscopy databank","termid":"PBO:0091375"}


id: PBO:0043881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB/ATF bZIP transcription factor","termid":"PBO:0043881"}


id: GO:0004821
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104538],"is_not":false,"summary":null,"term":"GO:0004821"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His).","definition_xrefs":["EC:6.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016874","GO:0140101"],"is_obsolete":false,"name":"histidine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HISTIDINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380234","Reactome:R-HSA-379844","RHEA:17313"],"synonyms":[{"name":"L-histidine:tRNAHis ligase (AMP-forming)","type":"related"},{"name":"histidine translase activity","type":"related"},{"name":"histidyl-tRNA synthetase activity","type":"exact"},{"name":"histidyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004821","terms_by_termid":{"GO:0004821":null}}


id: PBO:0085507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085507"}


id: SO:1000149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal mutation whereby the (large) region between the first two breaks listed is lost, and the two flanking segments (one of them centric) are joined as a translocation to the free ends resulting from the third break.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"},{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite_duplication","synonyms":[{"name":"(Drosophila)bDp","type":"related"},{"name":"bipartite duplication","type":"exact"}],"termid":"SO:1000149"}


id: GO:0006024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan biosynthetic process","synonyms":[{"name":"glycosaminoglycan anabolism","type":"exact"},{"name":"glycosaminoglycan biosynthesis","type":"exact"},{"name":"glycosaminoglycan formation","type":"exact"},{"name":"glycosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006024"}


id: PBO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo receptor for soluble proteins (predicted)","termid":"PBO:0005168"}


id: GO:0046876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"3,4-didehydroretinal binding","synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0046876"}


id: PBO:0059349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15","termid":"PBO:0059349"}


id: PBO:0073096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D","termid":"PBO:0073096"}


id: GO:1903452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G1 to G0 transition.","definition_xrefs":["PMID:24088570","GOC:TermGenie","GO_REF:0000058","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of G1 to G0 transition","termid":"GO:1903450"},{"relation_name":"positively_regulates","term_name":"G1 to G0 transition","termid":"GO:0070314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G1 to G0 transition","synonyms":[{"name":"activation of G1 to G0 transition","type":"narrow"},{"name":"activation of G1/G0 transition","type":"narrow"},{"name":"activation of cell cycle quiescence","type":"related"},{"name":"activation of establishment of cell quiescence","type":"narrow"},{"name":"activation of stationary phase","type":"related"},{"name":"positive regulation of G1/G0 transition","type":"exact"},{"name":"positive regulation of cell cycle quiescence","type":"related"},{"name":"positive regulation of establishment of cell quiescence","type":"exact"},{"name":"positive regulation of stationary phase","type":"related"},{"name":"up regulation of G1 to G0 transition","type":"exact"},{"name":"up regulation of G1/G0 transition","type":"exact"},{"name":"up regulation of cell cycle quiescence","type":"related"},{"name":"up regulation of establishment of cell quiescence","type":"exact"},{"name":"up regulation of stationary phase","type":"related"},{"name":"up-regulation of G1 to G0 transition","type":"exact"},{"name":"up-regulation of G1/G0 transition","type":"exact"},{"name":"up-regulation of cell cycle quiescence","type":"related"},{"name":"up-regulation of establishment of cell quiescence","type":"exact"},{"name":"up-regulation of stationary phase","type":"related"},{"name":"upregulation of G1 to G0 transition","type":"exact"},{"name":"upregulation of G1/G0 transition","type":"exact"},{"name":"upregulation of cell cycle quiescence","type":"related"},{"name":"upregulation of establishment of cell quiescence","type":"exact"},{"name":"upregulation of stationary phase","type":"related"}],"termid":"GO:1903452"}


id: GO:0044618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the relaxation of smooth muscle in the uterus of a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of relaxation of smooth muscle in another organism","termid":"GO:0044617"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle relaxation","termid":"GO:1900719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of relaxation of uterine smooth muscle in another organism","synonyms":[{"name":"modulation of relaxation of uterine smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of uterine smooth muscle in other organism","type":"exact"}],"termid":"GO:0044618"}


id: PBO:0083424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF STP3/YLR375W","termid":"PBO:0083424"}


id: PBO:0044720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 7 (pseudogene)","termid":"PBO:0044720"}


id: GO:0033931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-galactosaminidic linkages in poly(D-galactosamine).","definition_xrefs":["EC:3.2.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"endogalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.109-RXN"],"synonyms":[{"name":"galactosaminoglycan glycanohydrolase activity","type":"related"}],"termid":"GO:0033931"}


id: PBO:0078042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 32","termid":"PBO:0078042"}


id: GO:0046452
data:
  {"annotated_genes":["SJAG_00529","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110215],"is_not":false,"summary":null,"term":"GO:0046452"},{"annotations":[67482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrofolate, the dihydroxylated derivative of folate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_01198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dihydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"dihydrofolate metabolism","type":"exact"},{"name":"dihydrofolate reduction","type":"narrow"}],"termid":"GO:0046452","terms_by_termid":{"GO:0006761":null,"GO:0046452":null}}


id: PBO:0086066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Sec72p and Hrr25p","termid":"PBO:0086066"}


id: PBO:0065792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 1","termid":"PBO:0065792"}


id: PBO:0070799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 29","termid":"PBO:0070799"}


id: PBO:0065086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit beta 1","termid":"PBO:0065086"}


id: GO:0019241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrulline metabolic process","termid":"GO:0000052"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"citrulline catabolic process","secondary_identifiers":["MetaCyc:CITRULLINE-DEG-PWY"],"synonyms":[{"name":"citrulline breakdown","type":"exact"},{"name":"citrulline catabolism","type":"exact"},{"name":"citrulline degradation","type":"exact"}],"termid":"GO:0019241"}


id: PBO:0038889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 2","termid":"PBO:0038889"}


id: GO:0051696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of capping protein from the pointed (or minus) end of actin filaments to free the ends for addition, exchange or removal of further actin subunits.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament uncapping","termid":"GO:0051695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"pointed-end actin filament uncapping","synonyms":[{"name":"minus end F-actin uncapping","type":"exact"},{"name":"minus end actin filament uncapping","type":"exact"},{"name":"minus-end F-actin uncapping","type":"exact"},{"name":"minus-end actin filament uncapping","type":"exact"},{"name":"pointed end F-actin uncapping","type":"exact"},{"name":"pointed end actin filament uncapping","type":"exact"},{"name":"pointed-end F-actin uncapping","type":"exact"}],"termid":"GO:0051696"}


id: GO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines.","definition_xrefs":["PMID:9082980","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"TRAIL binding","synonyms":[{"name":"Apo-2L binding","type":"exact"}],"termid":"GO:0045569"}


id: FYPO:0001681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during S phase of a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to chromatin during S phase of meiotic cell cycle","synonyms":[{"name":"abolished protein localisation to chromatin during S phase of meiotic cell cycle","type":"exact"},{"name":"protein localization to chromatin during S phase of meiotic cell cycle abolished","type":"exact"}],"termid":"FYPO:0001681"}


id: GO:0061498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the mitotic spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate layer of spindle pole body","termid":"GO:0005821"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"intermediate layer of mitotic spindle pole body","termid":"GO:0061498"}


id: GO:0098565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the endosome membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lumenal side of endosome membrane","synonyms":[{"name":"internal leaflet of endosome membrane","type":"exact"},{"name":"internal side of endosome membrane","type":"exact"}],"termid":"GO:0098565"}


id: PBO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 3","termid":"PBO:0039522"}


id: PBO:0012543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_on_population_of","termid":"PBO:0012543"}


id: FYPO:0004271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cell septum edging catabolic process","synonyms":[{"name":"normal cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"normal cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"normal cell septum edging catabolism","type":"exact"},{"name":"normal cell septum edging hydrolysis","type":"exact"}],"termid":"FYPO:0004271"}


id: GO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome integral membrane receptor (obsolete GO:0005054)","synonyms":[{"name":"Pas20p","type":"related"},{"name":"peroxisome integral membrane receptor","type":"exact"}],"termid":"GO:0005054"}


id: GO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any small opening in a host cell membrane that allows the passage of gases and/or liquids, composed of host proteins.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell membrane pore complex","synonyms":[{"name":"pore complex in host cell membrane","type":"exact"}],"termid":"GO:0044084"}


id: MOD:00344
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-palmitoylglycine.","definition_xrefs":["PubMed:12574119","RESID:AA0339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino palmitoylated residue","termid":"MOD:01685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoylglycine","synonyms":[{"name":"(hexadecanamido)acetic acid","type":"exact"},{"name":"(hexadecanoylamino)acetic acid","type":"exact"},{"name":"(hexadecanoylamino)ethanoic acid","type":"exact"},{"name":"LIPID N-palmitoyl glycine","type":"exact"},{"name":"N-(1-oxohexadecyl)glycine","type":"exact"},{"name":"N-hexadecanoylated glycine","type":"exact"},{"name":"N-palmitoyl-glycine","type":"exact"},{"name":"N-palmitoylated glycine","type":"exact"},{"name":"NPamGly","type":"exact"}],"termid":"MOD:00344"}


id: PBO:0067427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 546, pseudogene","termid":"PBO:0067427"}


id: PBO:0052012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD1C antisense RNA 1","termid":"PBO:0052012"}


id: PBO:0088743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26","termid":"PBO:0088743"}


id: GO:1900458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["PMID:21855796","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brassinosteroid mediated signaling pathway","termid":"GO:1900457"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"down regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"downregulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"downregulation of brassinosteroid mediated signalling","type":"exact"},{"name":"inhibition of brassinosteroid mediated signaling pathway","type":"narrow"},{"name":"inhibition of brassinosteroid mediated signalling","type":"exact"},{"name":"negative regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900458"}


id: PBO:0064659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4A","termid":"PBO:0064659"}


id: PR:Q1MTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.06c gene.","definition_xrefs":["UniProtKB:Q1MTR5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger membrane protein C15C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.06c","synonyms":[{"name":"Spom972h-SPBC15C4.06c","type":"exact"}],"termid":"PR:Q1MTR5"}


id: PBO:0043415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide binding domain containing 1","termid":"PBO:0043415"}


id: PBO:0075474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 25","termid":"PBO:0075474"}


id: PBO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.19","termid":"PBO:0002640"}


id: PR:O74740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02729","PANTHER:PTHR11203:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor two protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.15c","secondary_identifiers":["UniProtKB:O74740"],"synonyms":[{"name":"Spom972h-CPSF2","type":"exact"}],"termid":"PR:O74740"}


id: GO:0097346
data:
  {"annotated_genes":["SJAG_04355","SJAG_00045","SJAG_03036","SJAG_02385","SJAG_04989","SJAG_00873","SJAG_03579","SJAG_02303","SJAG_02571","SJAG_03145","SJAG_05020","SJAG_02872","SJAG_03033","SJAG_02549","SJAG_02990","SJAG_01611","SJAG_02798","SJAG_05192","SJAG_01016","SJAG_05282","SJAG_04097","SJAG_02466","SJAG_00735","SJAG_04596","SJAG_01465","SJAG_02500","SJAG_00746","SJAG_03694","SJAG_03839"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111541,85080,105226,95546,90186,95298,109313,97712,91647,90293,89683,110377,97843,108401,105750,88971,84032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[109316,109483,86888,113394,97847,108405,95123,104042,88551,84206,92824,113575,97126,105234,110862,94407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A chromatin remodeling protein complex initially purified from S. cerevisiae and containing more than 10 subunits, including the SWR1-related complexes. INO80 (inositol requiring 80)-type complexes have diverse functions, including promoting transcriptional activation and DNA repair.","definition_xrefs":["GOC:rb","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00735":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_01016":null,"SJAG_01465":null,"SJAG_01611":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02798":null,"SJAG_02872":null,"SJAG_02990":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03839":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"INO80-type complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097346","terms_by_termid":{"GO:0000812":null,"GO:0031011":null}}


id: PBO:0055463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2896","termid":"PBO:0055463"}


id: PBO:0058766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6890","termid":"PBO:0058766"}


id: FYPO:0006885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is lower than normal.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0006551","FYPO:0005447","FYPO:0000120","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level at mitotic spindle","synonyms":[{"name":"decreased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"decreased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"decreased protein level in mitotic spindle","type":"exact"},{"name":"reduced protein level at mitotic spindle","type":"exact"}],"termid":"FYPO:0006885"}


id: PR:Q9US47
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate-semialdehyde dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11699:SF49","PRO:DNx","OMA:SCHPO00746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.12c","secondary_identifiers":["UniProtKB:Q9US47"],"synonyms":[{"name":"SSDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALDH5A1","type":"exact"}],"termid":"PR:Q9US47"}


id: PBO:0066680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 2","termid":"PBO:0066680"}


id: PBO:0004434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium ion transporter Mrs2 (predicted)","termid":"PBO:0004434"}


id: PATO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000105 p h sensitivity (obsolete PATO:0000105)","termid":"PATO:0000105"}


id: PBO:0047246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member B","termid":"PBO:0047246"}


id: PBO:0082656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; involved in transcription initiation and elongation and in mRNA degradation; conserved lysine in human homolog of Not3p and Not5p is mutated in cancers","termid":"PBO:0082656"}


id: PBO:0044653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 4","termid":"PBO:0044653"}


id: PBO:0070365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 3","termid":"PBO:0070365"}


id: GO:1902045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Fas signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Fas signaling pathway","termid":"GO:1902044"},{"relation_name":"negatively_regulates","term_name":"Fas signaling pathway","termid":"GO:0036337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Fas signaling pathway","synonyms":[{"name":"down regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down regulation of CD95 signaling pathway","type":"exact"},{"name":"down regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down regulation of Fas signaling pathway","type":"exact"},{"name":"down regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down regulation of FasL signaling pathway","type":"related"},{"name":"down regulation of FasR signaling pathway","type":"exact"},{"name":"down-regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down-regulation of CD95 signaling pathway","type":"exact"},{"name":"down-regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down-regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down-regulation of Fas signaling pathway","type":"exact"},{"name":"down-regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down-regulation of FasL signaling pathway","type":"related"},{"name":"down-regulation of FasR signaling pathway","type":"exact"},{"name":"downregulation of Apo-1 signaling pathway","type":"exact"},{"name":"downregulation of CD95 signaling pathway","type":"exact"},{"name":"downregulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"downregulation of Fas receptor signaling pathway","type":"exact"},{"name":"downregulation of Fas signaling pathway","type":"exact"},{"name":"downregulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"downregulation of FasL signaling pathway","type":"related"},{"name":"downregulation of FasR signaling pathway","type":"exact"},{"name":"inhibition of Apo-1 signaling pathway","type":"narrow"},{"name":"inhibition of CD95 signaling pathway","type":"narrow"},{"name":"inhibition of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas receptor signaling pathway","type":"narrow"},{"name":"inhibition of Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas-FasL signaling pathway","type":"narrow"},{"name":"inhibition of FasL signaling pathway","type":"related"},{"name":"inhibition of FasR signaling pathway","type":"narrow"},{"name":"negative regulation of Apo-1 signaling pathway","type":"exact"},{"name":"negative regulation of CD95 signaling pathway","type":"exact"},{"name":"negative regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"negative regulation of Fas receptor signaling pathway","type":"exact"},{"name":"negative regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"negative regulation of FasL signaling pathway","type":"related"},{"name":"negative regulation of FasR signaling pathway","type":"exact"}],"termid":"GO:1902045"}


id: GO:0010865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stipule over time, from its formation to the mature structure. A stipule is one of (usually) a pair of appendages at the bases of leaves in many broad-leaved angiosperms.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stipule development","termid":"GO:0010865"}


id: FYPO:0001591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal histidine import","termid":"FYPO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histidine import","synonyms":[{"name":"decreased L-histidine import","type":"exact"},{"name":"decreased L-histidine import across plasma membrane","type":"exact"},{"name":"decreased histidine import during mitotic cell cycle","type":"related"},{"name":"decreased histidine import during vegetative growth","type":"exact"},{"name":"decreased histidine import into cell","type":"exact"},{"name":"decreased histidine uptake","type":"exact"},{"name":"reduced histidine import","type":"exact"}],"termid":"FYPO:0001591"}


id: PBO:0058932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12 kinetochore complex component","termid":"PBO:0058932"}


id: GO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in mesonephros development","synonyms":[{"name":"mesonephros pattern formation","type":"related"},{"name":"mesonephros pattern specification","type":"exact"}],"termid":"GO:0061227"}


id: PBO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated scaffold protein 2","termid":"PBO:0060173"}


id: GO:0047773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-carnitinamide + H2O = (R)-carnitine + NH4.","definition_xrefs":["EC:3.5.1.73","RHEA:17537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"carnitinamidase activity","secondary_identifiers":["KEGG_REACTION:R01922","MetaCyc:CARNITINAMIDASE-RXN"],"synonyms":[{"name":"L-carnitinamidase activity","type":"related"},{"name":"L-carnitinamide amidohydrolase activity","type":"related"},{"name":"L-carnitine amidase activity","type":"related"},{"name":"carnitine amidase activity","type":"related"}],"termid":"GO:0047773"}


id: PBO:0049497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 4","termid":"PBO:0049497"}


id: PBO:0069313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 571, pseudogene","termid":"PBO:0069313"}


id: FYPO:0006817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006817"}


id: PBO:0036015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutamate","termid":"PBO:0036015"}


id: PBO:0027254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_growth","termid":"PBO:0027254"}


id: PBO:0089365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar zinc exporter, ZIP family, Zip2","termid":"PBO:0089365"}


id: PBO:0076390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 3","termid":"PBO:0076390"}


id: GO:0034043
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92322],"is_not":false,"summary":null,"term":"GO:0034043"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of 5-hydroxymethyluracil bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar.","definition_xrefs":["PMID:17641464","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","termid":"GO:0000703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-hydroxymethyluracil DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-hmU DNA N-glycosylase activity","type":"exact"}],"termid":"GO:0034043","terms_by_termid":{"GO:0034043":null}}


id: GO:0050374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + UDP-alpha-D-galacturonate = CO2 + UDP-L-arabinose.","definition_xrefs":["RHEA:19725","EC:4.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"UDP-galacturonate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02636","MetaCyc:UDP-GALACTURONATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"UDP-D-galacturonate carboxy-lyase (UDP-L-arabinose-forming)","type":"related"},{"name":"UDP-D-galacturonate carboxy-lyase activity","type":"related"},{"name":"UDP-galacturonic acid decarboxylase activity","type":"related"},{"name":"UDPGalUA carboxy lyase activity","type":"related"},{"name":"UDPgalacturonate decarboxylase activity","type":"related"}],"termid":"GO:0050374"}


id: GO:0050031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-pipecolate + O2 = 2,3,4,5-tetrahydropyridine-2-carboxylate + H2O2 + H+. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["EC:1.5.3.7","RHEA:11992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-pipecolate oxidase activity","secondary_identifiers":["MetaCyc:L-PIPECOLATE-OXIDASE-RXN","KEGG_REACTION:R02204","Reactome:R-HSA-6783880"],"synonyms":[{"name":"L-pipecolate:oxygen 1,6-oxidoreductase activity","type":"related"},{"name":"L-pipecolic acid oxidase activity","type":"related"}],"termid":"GO:0050031"}


id: GO:0098728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell, to produce a daughter stem cell and a daughter germ cell which will divide to form one or more gametes.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell division","termid":"GO:0042078"},{"relation_name":"is_a","term_name":"asymmetric stem cell division","termid":"GO:0098722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germline stem cell asymmetric division","termid":"GO:0098728"}


id: PBO:0085048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unconfirmed function; affects pre-rRNA processing, may act as a negative regulator of the transcription of genes involved in pseudohyphal growth; homologous to Srd1p","termid":"PBO:0085048"}


id: GO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of electrons from NADH to the quinone pool that occurs during oxidative phosphorylation and results in the generation of a proton gradient, mediated by the enzyme known as NADH-quinone oxidoreductase.","definition_xrefs":["GOC:mah","GOC:sd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"plasma membrane ATP synthesis coupled electron transport","termid":"GO:0042774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"plasma membrane electron transport, NADH to quinone","termid":"GO:0030965"}


id: GO:0035341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of inosine transport","synonyms":[{"name":"regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035341"}


id: PBO:0067843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 145","termid":"PBO:0067843"}


id: PBO:0017521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating activity Atg10","termid":"PBO:0017521"}


id: PATO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased permeability","synonyms":[{"name":"low permeability","type":"exact"}],"termid":"PATO:0001578"}


id: FYPO:0006843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin is increased.","definition_xrefs":["PomBase:mah","PMID:28904333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased histone H3 localization to chromatin","synonyms":[{"name":"increased histone H3 localisation to chromatin","type":"exact"},{"name":"increased histone H3 localization to chromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3 localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006843"}


id: PBO:0053259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF interleukin 6 family cytokine","termid":"PBO:0053259"}


id: GO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, other proteins, and sometimes RNA.","definition_xrefs":["PMID:20404130"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin disassembly (obsolete GO:0031498)","synonyms":[{"name":"chromatin maintenance","type":"broad"}],"termid":"GO:0031498"}


id: PBO:0110497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 4","termid":"PBO:0110497"}


id: PBO:0089597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor","termid":"PBO:0089597"}


id: FYPO:0007902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis begins at the same time as normal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of cytokinesis","termid":"FYPO:0007902"}


id: GO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interferon-gamma binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:add","GOC:dph","GOC:signaling","PMID:28901902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type II interferon","termid":"GO:0071346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"type II interferon-mediated signaling pathway","synonyms":[{"name":"gamma-interferon-mediated signaling pathway","type":"exact"},{"name":"immune interferon signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"type II IFN-mediated signaling pathway","type":"exact"}],"termid":"GO:0060333"}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.17.5.1-RXN","KEGG_REACTION:R07222","EC:1.17.5.1"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: PBO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor interacting protein","termid":"PBO:0051961"}


id: PR:P87307
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug37 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 37 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.05","synonyms":[{"name":"Spom972h-mug37","type":"exact"}],"termid":"PR:P87307"}


id: PBO:0044743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 20 pseudogene 1","termid":"PBO:0044743"}


id: GO:0005552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete polyubiquitin (obsolete GO:0005552)","synonyms":[{"name":"polyubiquitin","type":"exact"}],"termid":"GO:0005552"}


id: PBO:0083618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 beta subunit of the pyruvate dehydrogenase (PDH) complex; PDH is an evolutionarily conserved multi-protein complex found in mitochondria","termid":"PBO:0083618"}


id: GO:1903637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein insertion into mitochondrial outer membrane.","definition_xrefs":["PMID:16374546","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of protein targeting to mitochondrion","termid":"GO:1903215"},{"relation_name":"is_a","term_name":"regulation of protein insertion into mitochondrial outer membrane","termid":"GO:1903636"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein insertion into mitochondrial outer membrane","termid":"GO:0045040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"negative regulation of protein insertion into mitochondrial outer membrane","synonyms":[{"name":"down regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"down regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"down regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"down regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"down-regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"downregulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"inhibition of mitochondrial outer membrane protein import","type":"narrow"},{"name":"inhibition of protein import into mitochondrial outer membrane","type":"narrow"},{"name":"inhibition of protein insertion into mitochondrial outer membrane","type":"narrow"},{"name":"inhibition of protein transport into mitochondrial outer membrane","type":"narrow"},{"name":"negative regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"negative regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"negative regulation of protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:1903637"}


id: PBO:0076710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 12","termid":"PBO:0076710"}


id: PBO:0042390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member d","termid":"PBO:0042390"}


id: GO:0106429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:11-cis-retinol-[retinal-binding-protein] + NAD+ = 11-cis-retinal-[retinol-binding-protein] + NADH.","definition_xrefs":["RHEA:55668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"11-cis-retinol dehydrogenase","secondary_identifiers":["EC:1.1.1.315"],"termid":"GO:0106429"}


id: PBO:0073137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog A, vesicle trafficking protein","termid":"PBO:0073137"}


id: GO:0030192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of chaperones of the Hsp70/Hsc70 class.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp70/Hsc70 protein regulator activity (obsolete GO:0030192)","synonyms":[{"name":"Hsp70/Hsc70 protein regulator activity","type":"exact"}],"termid":"GO:0030192"}


id: GO:0046741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a virus between tissues in a multicellular organism.","definition_xrefs":["GOC:bf","ISBN:0781718325","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport of virus in multicellular host","termid":"GO:0046739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of virus in host, tissue to tissue","synonyms":[{"name":"spread of virus in host, tissue to tissue","type":"related"},{"name":"spread of virus within host, tissue to tissue","type":"exact"},{"name":"tissue to tissue spread of virus within host","type":"exact"},{"name":"viral spread within host, tissue to tissue","type":"exact"}],"termid":"GO:0046741"}


id: PBO:0068554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 5, pseudogene","termid":"PBO:0068554"}


id: GO:1901996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of indoleacetic acid biosynthetic process via tryptophan.","definition_xrefs":["PMID:23377040","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin biosynthetic process","termid":"GO:0010600"},{"relation_name":"is_a","term_name":"regulation of tryptophan metabolic process","termid":"GO:0090357"},{"relation_name":"regulates","term_name":"indoleacetic acid biosynthetic process via tryptophan","termid":"GO:0009848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of indoleacetic acid biosynthetic process via tryptophan","synonyms":[{"name":"regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"regulation of indoleacetic acid synthesis via tryptophan","type":"exact"}],"termid":"GO:1901996"}


id: PBO:0017790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4 (predicted)","termid":"PBO:0017790"}


id: PBO:0079921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase","termid":"PBO:0079921"}


id: GO:0021806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial stages of cell motility involved in the glial-mediated movement of cells in the developing cerebral cortex.","definition_xrefs":["GOC:cls","PMID:12626695","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of movement involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"initiation of movement involved in cerebral cortex glial-mediated radial migration","type":"related"}],"termid":"GO:0021806"}


id: PBO:0004529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine (K) and glutamic acid (E) Rich protein","termid":"PBO:0004529"}


id: GO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:dph","PMID:9858577","PMID:12086627"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to osmotic stress (obsolete GO:0061392)","termid":"GO:0061392"}


id: PBO:0045323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 3","termid":"PBO:0045323"}


id: GO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"epithelial cell-cell adhesion","termid":"GO:0090136"}


id: SO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the 3' region overlaps with another gene's 5' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_five_prime_overlap","synonyms":[{"name":"5' 3' overlap","type":"exact"},{"name":"three prime five prime overlap","type":"exact"}],"termid":"SO:0000076"}


id: GO:0090215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity (obsolete GO:0090215)","termid":"GO:0090215"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: PBO:0067866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 168","termid":"PBO:0067866"}


id: PR:O74898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthine methyl ester synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04943","PRO:DNx","PANTHER:PTHR10882:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyl ester synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.14","secondary_identifiers":["UniProtKB:O74898"],"synonyms":[{"name":"Spom972h-DPH5","type":"exact"},{"name":"diphthamide biosynthesis methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74898"}


id: PBO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint protein Drc1","termid":"PBO:0001547"}


id: PBO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps45","termid":"PBO:0000603"}


id: GO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"negatively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"down regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"downregulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"inhibition of paraxial mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048351"}


id: MOD:00714
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a methylated glycine, such as N-methylglycine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated glycine","synonyms":[{"name":"MeGly","type":"exact"}],"termid":"MOD:00714"}


id: SO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group III introns are introns found in the mRNA of the plastids of euglenoid protists. They are spliced by a two step transesterification with bulged adenosine as initiating nucleophile.","definition_xrefs":["PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_III_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_III_intron"],"synonyms":[{"name":"group III intron","type":"exact"}],"termid":"SO:0001213"}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098772","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: GO:0048133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell in the male gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the male gametes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell asymmetric division","termid":"GO:0098728"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line stem cell asymmetric division","synonyms":[{"name":"male germ-line stem cell renewal","type":"exact"}],"termid":"GO:0048133"}


id: PBO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 30 member C","termid":"PBO:0046916"}


id: PBO:0016955
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marinesco-Sjogren syndrome","termid":"PBO:0016955"}


id: PBO:0085682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in protein sorting; involved in targeting mitochondrial membrane proteins to mitochondrial translocation system; mutation causes respiration defects","termid":"PBO:0085682"}


id: GO:0160125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A gated channel activity that enables the transmembrane transfer of a sodium ion by a channel that opens in response to a change in pH.","definition_xrefs":["PMID:34767445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated sodium channel activity","termid":"GO:0015280"},{"relation_name":"is_a","term_name":"pH-gated monoatomic ion channel activity","termid":"GO:0160128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pH-gated sodium channel activity","synonyms":[{"name":"pH-dependent sodium channel activity","type":"related"},{"name":"pH-sensitive sodium channel activity","type":"related"}],"termid":"GO:0160125"}


id: GO:1903567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to ciliary membrane.","definition_xrefs":["GOC:krc","GOC:TermGenie","PMID:22072986","GO_REF:0000058","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to ciliary membrane","synonyms":[{"name":"regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"regulation of protein localization in ciliary membrane","type":"exact"}],"termid":"GO:1903567"}


id: PATO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000939 regular shape (obsolete PATO:0000939)","termid":"PATO:0000939"}


id: SOFP:missing_start_codon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"true if start of CDS is unknown","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"missing_start_codon","termid":"SOFP:missing_start_codon"}


id: GO:0032637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-8 production","secondary_identifiers":["GO:0072606","GO:0042228"],"synonyms":[{"name":"IL-8 production","type":"exact"},{"name":"interleukin-8 biosynthetic process","type":"narrow"},{"name":"interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032637"}


id: GO:0051079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the nuclear membranes during the first division of meiosis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane disassembly","termid":"GO:0051078"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013","GO:0061024"],"is_obsolete":false,"name":"meiosis I nuclear membrane disassembly","synonyms":[{"name":"meiosis I nuclear envelope breakdown","type":"related"},{"name":"meiosis I nuclear envelope catabolism","type":"related"},{"name":"meiosis I nuclear envelope degradation","type":"related"},{"name":"meiosis I nuclear envelope disassembly","type":"related"}],"termid":"GO:0051079"}


id: PBO:0030467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pantothenate_import","termid":"PBO:0030467"}


id: SO:1001188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, but encodes only one polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_alternately_spliced_transcripts","termid":"SO:0000463"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_1_polypeptide","synonyms":[{"name":"encodes 1 polypeptide","type":"exact"}],"termid":"SO:1001188"}


id: PBO:0108915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 1 (pseudogene)","termid":"PBO:0108915"}


id: SO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H2A histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2A_acetylation_site","termid":"SO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AK9_acetylation_site","synonyms":[{"name":"H2AK9 acetylation site","type":"exact"},{"name":"H2AK9ac","type":"exact"}],"termid":"SO:0001944"}


id: GO:0060086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism modulates its internal body temperature at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian temperature homeostasis","synonyms":[{"name":"circadian regulation of body temperature","type":"related"},{"name":"circadian thermoregulation","type":"exact"}],"termid":"GO:0060086"}


id: GO:0018807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity","secondary_identifiers":["EC:3.7.1.21","RHEA:39651"],"termid":"GO:0018807"}


id: PBO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 1","termid":"PBO:0052151"}


id: PBO:0108545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase type II (DSB-forming) Rec12/Spo11","termid":"PBO:0108545"}


id: PBO:0088647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex WD repeat subunit Raf1/Dos1","termid":"PBO:0088647"}


id: PBO:0081265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 3","termid":"PBO:0081265"}


id: PBO:0047045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member B","termid":"PBO:0047045"}


id: PBO:0002476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein, involved in chromatin remodeling (predicted)","termid":"PBO:0002476"}


id: PBO:0056000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056000"}


id: PBO:0066420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REPIN1 antisense RNA 1","termid":"PBO:0066420"}


id: GO:0010770
data:
  {"annotated_genes":["SJAG_00514","SJAG_02392","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86065,90749,92022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"positively_regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010770","terms_by_termid":{"GO:0051519":null}}


id: PBO:0087140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that directly activates mRNA decapping; binds mRNA substrate and enhances activity of decapping proteins Dcp1p and Dcp2p; has a role in translation during heat stress; protein increases in abundance and relocalizes to nucleolus and to nuclear foci upon DNA replication stress; EDC2 has a paralog, EDC1, that arose from the whole genome duplication","termid":"PBO:0087140"}


id: GO:0006407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rRNA from the nucleus to the cytoplasm; the rRNA is usually in the form of ribonucleoproteins.","definition_xrefs":["GOC:ma","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete rRNA export from nucleus (obsolete GO:0006407)","synonyms":[{"name":"rRNA export from cell nucleus","type":"exact"},{"name":"rRNA export out of nucleus","type":"exact"},{"name":"rRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"rRNA-nucleus export","type":"exact"}],"termid":"GO:0006407"}


id: GO:0004995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a tachykinin neuropeptide and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf","PMID:7639617","GOC:ai","Wikipedia:Tachykinin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"tachykinin receptor activity","termid":"GO:0004995"}


id: GO:0035401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-tyrosine (position 41) + ATP = histone H3-phosphotyrosine (position 41) + ADP. This reaction is the addition of a phosphate group to the tyrosine residue at position 41 of histone H3.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activity","termid":"GO:0004713"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0140096","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"histone H3Y41 kinase activity","synonyms":[{"name":"histone H3-Y41 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-Y41 specific)","type":"exact"},{"name":"histone tyrosine kinase activity (H3-Y41 specific)","type":"exact"},{"name":"histone-tyrosine kinase activity (H3-Y41 specific)","type":"exact"}],"termid":"GO:0035401"}


id: PBO:0065200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 pseudogene 1","termid":"PBO:0065200"}


id: GO:0009649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synchronization of a circadian rhythm to environmental time cues such as light.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entrainment of circadian clock","synonyms":[{"name":"regulation of circadian rhythm phase","type":"related"}],"termid":"GO:0009649"}


id: PBO:0025497
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic Trna thioUridilase","termid":"PBO:0025497"}


id: PBO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox containing 1","termid":"PBO:0050072"}


id: GO:0044523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, damaging the extracellular matrix of muscle cells and ultimately resulting in muscle necrosis in the bitten organism.","definition_xrefs":["GOC:fj","PMID:21150580","GOC:jl","PMID:20398688","PMID:33460638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in muscle damage in another organism","termid":"GO:0044521"},{"relation_name":"is_a","term_name":"disruption of extracellular matrix of another organism","termid":"GO:0141041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in damage of muscle extracellular matrix in another organism","synonyms":[{"name":"envenomation resulting in damage of muscle extracellular matrix causing muscle necrosis in other organism","type":"exact"},{"name":"envenomation resulting in damage of muscle extracellular matrix in other organism","type":"exact"}],"termid":"GO:0044523"}


id: PR:O74832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet127 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA degradation protein pet127, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.04c","synonyms":[{"name":"Spom972h-pet127","type":"exact"}],"termid":"PR:O74832"}


id: PBO:0049209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2C","termid":"PBO:0049209"}


id: PBO:0088576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc82","termid":"PBO:0088576"}


id: GO:0039631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive movement along a single- or double-stranded DNA molecule, that contributes to the packing of viral DNA into a capsid.","definition_xrefs":["GOC:bm","PMID:17501915"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA translocase activity involved in viral DNA genome packaging (obsolete GO:0039631)","synonyms":[{"name":"viral DNA packaging activity","type":"related"},{"name":"viral DNA packaging motor activity","type":"related"}],"termid":"GO:0039631"}


id: GO:0010378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.","definition_xrefs":["PMID:16617099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature compensation of the circadian clock","synonyms":[{"name":"regulation of the circadian clock by temperature","type":"related"}],"termid":"GO:0010378"}


id: GO:0007570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent accumulation of genetic damage (obsolete GO:0007570)","synonyms":[{"name":"age dependent accumulation of genetic damage","type":"exact"}],"termid":"GO:0007570"}


id: PBO:0042517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDIP transferase opposite strand, pseudogene","termid":"PBO:0042517"}


id: PBO:0085258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral mitochondrial inner membrane protein; may facilitate use of unformylated tRNA-Met in mitochondrial translation initiation; stabilizes the bicistronic AAP1-ATP6 mRNA","termid":"PBO:0085258"}


id: PBO:0080478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 2-1","termid":"PBO:0080478"}


id: GO:0102985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oleoyl-CoA + O2 + a reduced electron acceptor = linoleoyl-CoA + 2 H2O + an oxidized electron acceptor. This microsomal enzyme introduces a cis double bond at position 12 of fatty-acyl-CoAs that contain a cis double bond at position 9.","definition_xrefs":["GOC:pz","RHEA:25856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"delta12-fatty-acid desaturase activity","secondary_identifiers":["MetaCyc:RXN-9601","EC:1.14.19.6"],"termid":"GO:0102985"}


id: PBO:0048690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 like 2","termid":"PBO:0048690"}


id: PR:O13896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00468","PANTHER:PTHR11239:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.05","secondary_identifiers":["UniProtKB:O13896"],"synonyms":[{"name":"DNA-directed RNA polymerases III 12.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3K","type":"exact"}],"termid":"PR:O13896"}


id: GO:1904020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24732013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor internalization","synonyms":[{"name":"regulation of G-protein-coupled receptor internalization","type":"exact"}],"termid":"GO:1904020"}


id: GO:0055034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Bolwig's organ over time, from its formation to the mature structure. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bolwig's organ development","termid":"GO:0055034"}


id: PBO:0055842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRIG2 divergent transcript","termid":"PBO:0055842"}


id: PBO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD binding dehydrogenase family protein","termid":"PBO:0001782"}


id: PBO:0091561
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae LIA1","termid":"PBO:0091561"}


id: PATO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism having given birth one time.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parity","termid":"PATO:0002370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primiparous","termid":"PATO:0002371"}


id: PBO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB13 divergent transcript","termid":"PBO:0045919"}


id: GO:0030489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete processing of 27S pre-rRNA (obsolete GO:0030489)","synonyms":[{"name":"processing of 27S pre-rRNA","type":"exact"}],"termid":"GO:0030489"}


id: GO:1900653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of demethylkotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of demethylkotanin biosynthetic process","termid":"GO:1900652"},{"relation_name":"negatively_regulates","term_name":"demethylkotanin biosynthetic process","termid":"GO:1900599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of demethylkotanin biosynthetic process","synonyms":[{"name":"down regulation of demethylkotanin anabolism","type":"exact"},{"name":"down regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"down regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"down regulation of demethylkotanin formation","type":"exact"},{"name":"down regulation of demethylkotanin synthesis","type":"exact"},{"name":"down-regulation of demethylkotanin anabolism","type":"exact"},{"name":"down-regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"down-regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"down-regulation of demethylkotanin formation","type":"exact"},{"name":"down-regulation of demethylkotanin synthesis","type":"exact"},{"name":"downregulation of demethylkotanin anabolism","type":"exact"},{"name":"downregulation of demethylkotanin biosynthesis","type":"exact"},{"name":"downregulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"downregulation of demethylkotanin formation","type":"exact"},{"name":"downregulation of demethylkotanin synthesis","type":"exact"},{"name":"inhibition of demethylkotanin anabolism","type":"exact"},{"name":"inhibition of demethylkotanin biosynthesis","type":"exact"},{"name":"inhibition of demethylkotanin biosynthetic process","type":"narrow"},{"name":"inhibition of demethylkotanin formation","type":"exact"},{"name":"inhibition of demethylkotanin synthesis","type":"exact"},{"name":"negative regulation of demethylkotanin anabolism","type":"exact"},{"name":"negative regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"negative regulation of demethylkotanin formation","type":"exact"},{"name":"negative regulation of demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900653"}


id: RO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l ","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_along","termid":"RO:0002341"}


id: GO:0035160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal tubes in an open tracheal system maintain their epithelial structure during the cell shape changes and movements that occur during the branching process.","definition_xrefs":["PMID:10694415","PMID:14681183","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial structure maintenance","termid":"GO:0010669"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of epithelial integrity, open tracheal system","synonyms":[{"name":"maintenance of tracheal epithelial integrity","type":"exact"}],"termid":"GO:0035160"}


id: PBO:0015700
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.3x10^4 min-1 M-1","termid":"PBO:0015700"}


id: PBO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 23","termid":"PBO:0070557"}


id: PBO:0060052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 40","termid":"PBO:0060052"}


id: PBO:0077141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1 pseudogene 1","termid":"PBO:0077141"}


id: PBO:0068704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 85, pseudogene","termid":"PBO:0068704"}


id: PBO:0072357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 43","termid":"PBO:0072357"}


id: GO:0047998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-hyoscyamine + O2 = (6S)-6-hydroxyhyoscyamine + CO2 + succinate.","definition_xrefs":["RHEA:12629","EC:1.14.11.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hyoscyamine (6S)-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03812","MetaCyc:HYOSCYAMINE-6-DIOXYGENASE-RXN"],"synonyms":[{"name":"L-hyoscyamine,2-oxoglutarate:oxygen oxidoreductase ((6S)-hydroxylating)","type":"related"},{"name":"hyoscyamine (6S)-hydroxylase activity","type":"related"},{"name":"hyoscyamine 6-beta-hydroxylase activity","type":"related"},{"name":"hyoscyamine 6-hydroxylase activity","type":"related"},{"name":"hyoscyamine 6beta-dioxygenase activity","type":"related"},{"name":"hyoscyamine 6beta-hydroxylase activity","type":"related"}],"termid":"GO:0047998"}


id: PBO:0057250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 451a","termid":"PBO:0057250"}


id: PBO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 3","termid":"PBO:0070446"}


id: PBO:0090016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC3) subunit Ptr8","termid":"PBO:0090016"}


id: GO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A permanent cessation of all vital functions of a tissue.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue death (obsolete GO:0016271)","termid":"GO:0016271"}


id: RO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"partner_in","termid":"RO:0002461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target_participant_in","termid":"RO:0002463"}


id: GO:1903374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of a subarachnoid space over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","Wikipedia:Subarachnoid_space","GOC:cjm","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete subarachnoid space development (obsolete GO:1903374)","synonyms":[{"name":"cavitas subarachnoidea development","type":"related"},{"name":"cavum subarachnoideale development","type":"related"},{"name":"spatium leptomeningeum development","type":"related"},{"name":"spatium subarachnoideum development","type":"related"},{"name":"subarachnoid cavity development","type":"related"}],"termid":"GO:1903374"}


id: PBO:0067452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 575, pseudogene","termid":"PBO:0067452"}


id: PBO:0058841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8071-1","termid":"PBO:0058841"}


id: PBO:0080580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5 divergent transcript","termid":"PBO:0080580"}


id: PBO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 51","termid":"PBO:0042000"}


id: PBO:0074309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD1 antisense RNA 2","termid":"PBO:0074309"}


id: GO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic catabolic process","synonyms":[{"name":"peptide antibiotic breakdown","type":"exact"},{"name":"peptide antibiotic catabolism","type":"exact"},{"name":"peptide antibiotic degradation","type":"exact"}],"termid":"GO:0030652"}


id: PomGeneEx:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at a the same rate under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constant","synonyms":[{"name":"gene expression constant","type":"exact"},{"name":"gene product level constant","type":"exact"}],"termid":"PomGeneEx:0000007"}


id: MOD:01995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-formyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-tryptophan","termid":"MOD:01106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N2-formyl-L-tryptophan","synonyms":[{"name":"N2FoTrp","type":"exact"}],"termid":"MOD:01995"}


id: PBO:0086202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; required for the stability of Oli1p (Atp9p) mRNA; also required for the Oli1p ring formation; YMR098C is not an essential gene","termid":"PBO:0086202"}


id: PBO:0065963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 recombinase","termid":"PBO:0065963"}


id: PBO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G","termid":"PBO:0043283"}


id: PBO:0028546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0028546"}


id: PBO:0091633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent aldo/keto reductase, unknown biological role, implicated in cellular detoxification","termid":"PBO:0091633"}


id: PBO:0045799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 3","termid":"PBO:0045799"}


id: PBO:0078781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 6-1","termid":"PBO:0078781"}


id: GO:0052093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiotic cellular or anatomical structure for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of specialized structure for nutrient acquisition","synonyms":[{"name":"formation by organism of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of specialized structure for nutrient acquisition from host","type":"exact"},{"name":"formation of specialized structure for nutrient acquisition from host","type":"exact"}],"termid":"GO:0052093"}


id: GO:0007257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase (JNK).","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JUN kinase activity (obsolete GO:0007257)","synonyms":[{"name":"activation of SAPK activity","type":"broad"}],"termid":"GO:0007257"}


id: SO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome variation derived from an event during meiosis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_variation","termid":"SO:0000240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_variation","synonyms":[{"name":"assortment derived variation","type":"related"}],"termid":"SO:0001504"}


id: PBO:0051764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 8","termid":"PBO:0051764"}


id: GO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"},{"relation_name":"regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"}


id: PBO:0110041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 4","termid":"PBO:0110041"}


id: GO:1903728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a luteal cell. Large luteal cells develop from granulosa cells. Small luteal cells develop from theca cells.","definition_xrefs":["GOC:TermGenie","MP:0001133","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteal cell differentiation","synonyms":[{"name":"lutein cell differentiation","type":"exact"}],"termid":"GO:1903728"}


id: PBO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 6","termid":"PBO:0043316"}


id: GO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitters and the storage of the synthesized molecules.","definition_xrefs":["ISBN:0123668387","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process and storage (obsolete GO:0001506)","synonyms":[{"name":"neurotransmitter anabolism and storage","type":"exact"},{"name":"neurotransmitter biosynthetic process and storage","type":"exact"},{"name":"neurotransmitter formation and storage","type":"exact"},{"name":"neurotransmitter synthesis and storage","type":"exact"}],"termid":"GO:0001506"}


id: PBO:0059766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 40","termid":"PBO:0059766"}


id: PBO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA m(1)G methyltransferase Trm10 (predicted)","termid":"PBO:0001545"}


id: PBO:0078625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 74","termid":"PBO:0078625"}


id: GO:0035859
data:
  {"annotated_genes":["SJAG_00824","SJAG_03907","SJAG_00209","SJAG_02765","SJAG_04496","SJAG_00561","SJAG_01184","SJAG_02424"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84245],"is_not":false,"summary":null,"term":"GO:0035859"},{"annotations":[90342,84243,107120,103558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990130"},{"annotations":[94177,84536,102725,84244,85618],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A GTPase-activating protein (GAP) complex that regulates TORC1 signaling by interacting with the Rag GTPase. In S. cerevisiae the complex contains Seh1p, Sec13p, Npr2p, Npr3p, Iml1p, Mtc5p, Rtc1p, and Sea4p.","definition_xrefs":["GOC:jh","PMID:21454883","PMID:23974112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_02424":null,"SJAG_02765":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Seh1-associated complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GATOR complex","type":"exact"},{"name":"SEA complex","type":"exact"}],"termid":"GO:0035859","terms_by_termid":{"GO:0035859":null,"GO:0061700":null,"GO:1990130":null}}


id: FYPO:0007014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5.8S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mature 5.8S rRNA level","synonyms":[{"name":"normal 5.8S rRNA level","type":"broad"},{"name":"normal mature 5.8S rRNA accumulation","type":"related"},{"name":"normal mature 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 5.8S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007014"}


id: GO:0008919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + lipopolysaccharide = UDP + D-glucosyl-lipopolysaccharide.","definition_xrefs":["EC:2.4.1.58","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"lipopolysaccharide glucosyltransferase I activity","secondary_identifiers":["MetaCyc:RXN0-5126"],"synonyms":[{"name":"LPS glucosyltransferase I activity","type":"exact"},{"name":"UDP-glucose:lipopolysaccharide glucosyltransferase activity","type":"related"},{"name":"UDPglucose:lipopolysaccharide glucosyltransferase I","type":"related"},{"name":"UDPglucose:lipopolysaccharide glucosyltransferase activity","type":"related"},{"name":"lipopolysaccharide glucosyltransferase activity","type":"related"},{"name":"uridine diphosphate glucose:lipopolysaccharide glucosyltransferase I","type":"related"},{"name":"uridine diphosphoglucose-lipopolysaccharide glucosyltransferase activity","type":"related"}],"termid":"GO:0008919"}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:22588719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: FYPO:0006075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mature rRNA level","termid":"FYPO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased mature 25S rRNA level","synonyms":[{"name":"increased 25S rRNA level","type":"broad"},{"name":"increased mature 25S rRNA accumulation","type":"related"},{"name":"increased mature 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased mature 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0006075"}


id: PR:O13897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C22A12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.06c","synonyms":[{"name":"Spom972h-SPAC22A12.06c","type":"exact"}],"termid":"PR:O13897"}


id: PBO:0087265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr kinase involved in late nuclear division; one of the mitotic exit network (MEN) proteins; necessary for the execution of cytokinesis; also plays a role in regulating the stability of SWI5 and CLB2 mRNAs; DBF20 has a paralog, DBF2, that arose from the whole genome duplication","termid":"PBO:0087265"}


id: GO:0019230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors.","definition_xrefs":["ISBN:072168677X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"},{"relation_name":"part_of","term_name":"neuromuscular process controlling posture","termid":"GO:0050884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proprioception","secondary_identifiers":["Wikipedia:Proprioception"],"termid":"GO:0019230"}


id: PBO:0082351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; active as a hexamer; enhances the activity of ferric reductase (Fre1p); UTR1 has a paralog, YEF1, that arose from the whole genome duplication","termid":"PBO:0082351"}


id: PBO:0073546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and SYLF domain containing 1","termid":"PBO:0073546"}


id: GO:0019639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid catabolic process","termid":"GO:0016100"},{"relation_name":"is_a","term_name":"6-hydroxycineole metabolic process","termid":"GO:0019638"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"6-hydroxycineole catabolic process","secondary_identifiers":["MetaCyc:6-HYDROXYCINEOLE-DEGRADATION-PWY"],"synonyms":[{"name":"6-endo-hydroxycineole catabolic process","type":"exact"},{"name":"6-endo-hydroxycineole catabolism","type":"exact"},{"name":"6-hydroxycineole breakdown","type":"exact"},{"name":"6-hydroxycineole catabolism","type":"exact"},{"name":"6-hydroxycineole degradation","type":"exact"},{"name":"hydroxycineol catabolic process","type":"exact"},{"name":"hydroxycineol catabolism","type":"exact"}],"termid":"GO:0019639"}


id: GO:1990836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A matrix composed of supramolecular assemblies of lysosomal enzymes and lipids which forms at a pH of 5.0 within the lysosome.","definition_xrefs":["PMID:9395337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"lysosomal lumen","termid":"GO:0043202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lysosomal matrix","termid":"GO:1990836"}


id: PBO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_vegetative_cell_with_mislocalized_septum","termid":"PBO:0030391"}


id: PBO:0088614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1","termid":"PBO:0088614"}


id: PBO:0085482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable polyprenol reductase; catalyzes conversion of polyprenol to dolichol, the precursor for N-glycosylation; involved in filamentous growth; mutations in human homolog SRD5A3 confer CDG (Congenital Disorders of Glycosylation); human SRD5A3 can complement yeast null mutant","termid":"PBO:0085482"}


id: PBO:0070084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 41, pseudogene","termid":"PBO:0070084"}


id: GO:0016176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme superoxide-generating NADPH oxidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"superoxide-generating NADPH oxidase activator activity","synonyms":[{"name":"neutrophil cytosol factor 2","type":"narrow"}],"termid":"GO:0016176"}


id: PBO:0062121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 49 pseudogene","termid":"PBO:0062121"}


id: PBO:0053575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 596","termid":"PBO:0053575"}


id: GO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to non-antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to non-antigenic stimulus","type":"narrow"}],"termid":"GO:0002881"}


id: PBO:0054024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1355","termid":"PBO:0054024"}


id: FYPO:0002208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a larger volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spore","termid":"FYPO:0002207"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable swollen spore with abnormal shape","secondary_identifiers":["FYPO:0002205"],"synonyms":[{"name":"inviable enlarged spore with abnormal shape","type":"related"},{"name":"inviable large spore with abnormal shape","type":"related"},{"name":"inviable spore with increased size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with increased volume and abnormal shape","type":"exact"},{"name":"inviable swollen abnormally shaped spore","type":"exact"},{"name":"inviable swollen misshapen spore","type":"related"},{"name":"lethal; swollen spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, enlarged spore with abnormal shape","type":"related"},{"name":"spore germination abolished, large spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell volume","type":"exact"},{"name":"spore germination abolished, swollen misshapen spores","type":"related"},{"name":"spore germination abolished, swollen spore with abnormal shape","type":"related"}],"termid":"FYPO:0002208"}


id: PBO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-reactive protein","termid":"PBO:0043928"}


id: GO:0032253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dense core granule is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dense core granule localization","synonyms":[{"name":"dense core granule clustering","type":"related"},{"name":"dense core granule localisation","type":"exact"},{"name":"dense core vesicle localization","type":"exact"}],"termid":"GO:0032253"}


id: PBO:0042996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint with forkhead and ring finger domains","termid":"PBO:0042996"}


id: GO:0010817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the levels of hormone within an organism or a tissue. A hormone is any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone levels","termid":"GO:0010817"}


id: PBO:0017705
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDC43","termid":"PBO:0017705"}


id: PBO:0053312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, p53 induced transcript","termid":"PBO:0053312"}


id: SO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCAGCC, bound by the fungal transcription factor Ace2.","definition_xrefs":["PMID:16678171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ace2_UAS","synonyms":[{"name":"Ace2 upstream activating sequence","type":"exact"}],"termid":"SO:0001857"}


id: GO:0180021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + U6 snRNA = S-adenosyl-L-homocysteine + U6 containing a 3'-terminal 2'-O-methylnucleotide + H+.","definition_xrefs":["RHEA:63088","PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small RNA 2'-O-methyltransferase activity","termid":"GO:0090486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"U6 snRNA 2'-O-ribose methyltransferase activity","termid":"GO:0180021"}


id: GO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed germinates before being shed from the parent plant.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed germination on parent plant","synonyms":[{"name":"non-vegetative vivipary","type":"broad"},{"name":"pre-harvest sprouting","type":"exact"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048623"}


id: GO:0043778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 8 = cobyrinate.","definition_xrefs":["MetaCyc:RXN-8768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cobalt-precorrin-8 methylmutase activity","secondary_identifiers":["RHEA:16209","EC:5.4.99.60"],"synonyms":[{"name":"cobalt-precorrin 8 methylmutase activity","type":"exact"},{"name":"cobalt-precorrin 8X methylmutase activity","type":"exact"},{"name":"cobalt-precorrin-8X methylmutase activity","type":"exact"}],"termid":"GO:0043778"}


id: PBO:0039402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 2","termid":"PBO:0039402"}


id: GO:0140397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reactions: versiconal hemiacetal acetate + H2O = versiconal + acetate, as well as versiconol acetate + H2O = versiconol + acetate.","definition_xrefs":["PMID:15006741","PMID:15932995","PMID:8368837","EC:3.1.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"versiconal hemiacetal acetate esterase activity","secondary_identifiers":["MetaCyc:RXN-9488","MetaCyc:RXN-9493","RHEA:35715"],"termid":"GO:0140397"}


id: PR:Q9USV2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28F2.05c gene.","definition_xrefs":["UniProtKB:Q9USV2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C28F2.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.05c","synonyms":[{"name":"Spom972h-SPBC28F2.05c","type":"exact"}],"termid":"PR:Q9USV2"}


id: GO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immune response","termid":"GO:0045088"}


id: PBO:0029154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cumene_hydroperoxide","termid":"PBO:0029154"}


id: GO:0050213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-alpha-pregnan-3,20-dione + NADP+ = progesterone + NADPH.","definition_xrefs":["EC:1.3.1.30","MetaCyc:PROGESTERONE-5-ALPHA-REDUCTASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete progesterone 5-alpha-reductase activity (obsolete GO:0050213)","synonyms":[{"name":"5alpha-pregnan-3,20-dione:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"delta4-steroid 5alpha-reductase (progesterone)","type":"related"},{"name":"progesterone 5a-reductase activity","type":"exact"},{"name":"progesterone 5alpha-reductase activity","type":"related"},{"name":"steroid 5-alpha-reductase activity","type":"broad"}],"termid":"GO:0050213"}


id: PBO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transporter (predicted)","termid":"PBO:0000380"}


id: PBO:0071433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 39","termid":"PBO:0071433"}


id: PR:O13917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine-guanine phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.13c","synonyms":[{"name":"HGPRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HGPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hpt1","type":"exact"}],"termid":"PR:O13917"}


id: PBO:0029677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_morphology","termid":"PBO:0029677"}


id: PBO:0091338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.1625092_1625093insC","termid":"PBO:0091338"}


id: PBO:0082045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-methylisocitrate lyase of the mitochondrial matrix; functions in the methylcitrate cycle to catalyze the conversion of 2-methylisocitrate to succinate and pyruvate; ICL2 transcription is repressed by glucose and induced by ethanol","termid":"PBO:0082045"}


id: GO:0050759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of thymidylate synthase biosynthetic process (obsolete GO:0050759)","synonyms":[{"name":"activation of thymidylate synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of thymidylate synthase anabolism","type":"exact"},{"name":"positive regulation of thymidylate synthase biosynthesis","type":"exact"},{"name":"positive regulation of thymidylate synthase formation","type":"exact"},{"name":"positive regulation of thymidylate synthase synthesis","type":"exact"},{"name":"stimulation of thymidylate synthase biosynthetic process","type":"narrow"},{"name":"up regulation of thymidylate synthase biosynthetic process","type":"exact"},{"name":"up-regulation of thymidylate synthase biosynthetic process","type":"exact"},{"name":"upregulation of thymidylate synthase biosynthetic process","type":"exact"}],"termid":"GO:0050759"}


id: PBO:0077628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol methyltransferase 1B","termid":"PBO:0077628"}


id: PBO:0028944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_synthase_activity","termid":"PBO:0028944"}


id: FYPO:0000642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["GO:0006325","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin organization","synonyms":[{"name":"abnormal chromatin organisation","type":"exact"}],"termid":"FYPO:0000642"}


id: PBO:0050031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ beta 3","termid":"PBO:0050031"}


id: PBO:0048921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member R","termid":"PBO:0048921"}


id: PBO:0081214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 4","termid":"PBO:0081214"}


id: PBO:0073526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 21","termid":"PBO:0073526"}


id: PBO:0040842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0040842"}


id: PBO:0051403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 3, pseudogene","termid":"PBO:0051403"}


id: GO:1902148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to cytokinesis checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to cell cycle checkpoint signaling","termid":"GO:1902146"},{"relation_name":"is_a","term_name":"regulation of response to cytokinesis checkpoint signaling","termid":"GO:1902147"},{"relation_name":"positively_regulates","term_name":"response to cytokinesis checkpoint signaling","termid":"GO:0072399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:1902150"],"synonyms":[{"name":"activation of cytokinesis checkpoint effector process","type":"exact"},{"name":"activation of response to cytokinesis checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"positive regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"up regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"up regulation of response to cytokinesis checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"up-regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"up-regulation of response to cytokinesis checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in cytokinesis checkpoint","type":"exact"},{"name":"upregulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"upregulation of response to cytokinesis checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:1902148"}


id: PBO:0039452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat family A member 2","termid":"PBO:0039452"}


id: GO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a cell surface receptor that leads to the activation of an innate immune response.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15199967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"},{"relation_name":"is_a","term_name":"innate immune response-activating signaling pathway","termid":"GO:0002758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"innate immune response activating cell surface receptor signaling pathway","synonyms":[{"name":"activation of innate immune response by cell surface receptor signaling pathway","type":"exact"},{"name":"innate immune response activating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002220"}


id: GO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gastric acid secretion","termid":"GO:0060455"}


id: MOD:01782
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-methyl-L-serine.","definition_xrefs":["RESID:AA0533","PubMed:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-serine","synonyms":[{"name":"(2S)-3-hydroxy-2-(methylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N-methylserine","type":"exact"},{"name":"N-methyl-L-serine","type":"exact"},{"name":"N-methylserine","type":"exact"}],"termid":"MOD:01782"}


id: PBO:0064233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C eta 2","termid":"PBO:0064233"}


id: GO:1904047
data:
  {"annotated_genes":["SJAG_03755","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88457,94021],"is_not":false,"summary":null,"term":"GO:1904047"}]},"cv_name":"molecular_function","definition":"Binding to S-adenosyl-L-methionine.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:22985361","GO_REF:0000067","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"S-adenosyl-L-methionine binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070283","Reactome:R-HSA-947535"],"synonyms":[{"name":"radical SAM enzyme activity","type":"narrow"}],"termid":"GO:1904047","terms_by_termid":{"GO:1904047":null}}


id: GO:1990525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Baculovirus Inhibitor of apoptosis protein Repeat (BIR) domain.","definition_xrefs":["GOC:ha","InterPro:IPR001370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"BIR domain binding","synonyms":[{"name":"Baculovirus Inhibitor of apoptosis protein Repeat domain binding","type":"exact"}],"termid":"GO:1990525"}


id: PBO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisB","termid":"PBO:0013077"}


id: GO:0141041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways performed by an organism resulting in the breakdown of the extracellular matrix of another organism.","definition_xrefs":["PMID:2817904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of cellular anatomical structure in another organism","termid":"GO:0140975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of extracellular matrix of another organism","termid":"GO:0141041"}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: PBO:0069278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 534, pseudogene","termid":"PBO:0069278"}


id: PomGeneEx:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at the same rate under one set of conditions or at one indicated time as otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unchanged","synonyms":[{"name":"gene expression unchanged","type":"exact"},{"name":"gene product level unchanged","type":"exact"}],"termid":"PomGeneEx:0000004"}


id: GO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion transport","synonyms":[{"name":"regulation of Na+ transport","type":"exact"},{"name":"regulation of sodium transport","type":"exact"}],"termid":"GO:0002028"}


id: PBO:0085063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec66p","termid":"PBO:0085063"}


id: PBO:0059010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MME antisense RNA 1","termid":"PBO:0059010"}


id: PBO:0034263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_synaptic_terminal_in","termid":"PBO:0034263"}


id: SO:0002135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rearranges at the DNA level and codes the diversity region of the variable domain of aT-cell receptor gene.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_D_Gene","synonyms":[{"name":"T_cell_receptor_D_gene","type":"exact"}],"termid":"SO:0002135"}


id: FYPO:0000494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial genome maintenance","synonyms":[{"name":"mitochondrial genome maintenance: normal","type":"related"},{"name":"normal mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial genome maintenance during vegetative growth","type":"exact"}],"termid":"FYPO:0000494"}


id: PBO:0046255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 4","termid":"PBO:0046255"}


id: GO:0160029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a kidney cortex tubule cell (specialized epithelial cell of the kidney) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["PMID:31847447","PMID:18987110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation","termid":"GO:0043697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney cortex tubule cell dedifferentiation","termid":"GO:0160029"}


id: GO:1990059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit valve over time, from its formation to the mature structure. The fruit valve is a part of a fruit that splits apart when the fruit dehisces.","definition_xrefs":["PO:0000033","PMID:23133401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit valve development","termid":"GO:1990059"}


id: PBO:0049271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like 2","termid":"PBO:0049271"}


id: PBO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit (predicted)","termid":"PBO:0002563"}


id: MOD:01030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxybenzotriazole ester","synonyms":[{"name":"HOBt","type":"exact"}],"termid":"MOD:01030"}


id: PBO:0003698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRD ubiquitin ligase complex subunit (predicted)","termid":"PBO:0003698"}


id: GO:0097025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex formed by the association of MMP7, DLG1 and either LIN7A or LIN7C; regulates the stability and localization of DLG1 to cell junctions.","definition_xrefs":["GOC:BHF","PMID:17237226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"MPP7-DLG1-LIN7 complex","termid":"GO:0097025"}


id: PBO:0028964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_condensation","termid":"PBO:0028964"}


id: GO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the formation of carboxybiotin-carboxyl-carrier protein from biotin-carboxyl-carrier protein and carbon dioxide (CO2).","definition_xrefs":["EC:6.3.4.14"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin carboxylase complex (obsolete GO:0009343)","termid":"GO:0009343"}


id: PBO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 32","termid":"PBO:0071837"}


id: FYPO:0001601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered level of substance in vacuole","synonyms":[{"name":"abnormal level of substance in vacuole","type":"exact"},{"name":"abnormal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar level of substance","type":"exact"},{"name":"altered level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"altered vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001601"}


id: PBO:0052413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2","termid":"PBO:0052413"}


id: GO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRK receptor activity (obsolete GO:0005013)","synonyms":[{"name":"neurotrophin TRK receptor activity","type":"exact"}],"termid":"GO:0005013"}


id: GO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the site in the cell of an imaginal disc-derived wing at which a prehair initiates outgrowth. Restriction of prehair initiation to the distalmost part of a cell is essential to ensure that each wing epithelial cell produces one adult hair that points distally.","definition_xrefs":["GOC:mtg_transport","PMID:8947551","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"},{"relation_name":"part_of","term_name":"establishment of imaginal disc-derived wing hair orientation","termid":"GO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair site selection","synonyms":[{"name":"prehair localization","type":"related"},{"name":"wing hair site selection","type":"exact"}],"termid":"GO:0035320"}


id: PBO:0048036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicle stimulating hormone subunit beta","termid":"PBO:0048036"}


id: PBO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type zinc finger protein","termid":"PBO:0000152"}


id: PBO:0026912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0026912"}


id: PATO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000792 repair function value (obsolete PATO:0000792)","termid":"PATO:0000792"}


id: PATO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of temperature which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant temperature","termid":"PATO:0001314"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of temperature","synonyms":[{"name":"high variability of temperature","type":"exact"}],"termid":"PATO:0001308"}


id: GO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor production","termid":"GO:0090270"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor production","termid":"GO:0090271"}


id: GO:0010555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannitol stimulus.","definition_xrefs":["PMID:17999646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannitol","synonyms":[{"name":"response to mannitol stimulus","type":"exact"}],"termid":"GO:0010555"}


id: PR:P0CT55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-B/C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.15c","synonyms":[{"name":"EF-1-alpha-B/C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef103","type":"exact"}],"termid":"PR:P0CT55"}


id: PBO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar serine protease Isp6","termid":"PBO:0001604"}


id: FYPO:0002989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron transport messenger RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron transport m RNAs are transcribed from genes whose products are involved in iron transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of transmembrane transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of transmembrane transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of transmembrane transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of transmembrane transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mRNA level of genes involved in transmembrane transport during vegetative growth","type":"exact"},{"name":"increased mRNA level of transmembrane transport genes during vegetative growth","type":"exact"},{"name":"increased transmembrane transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002989"}


id: GO:0140010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-aspartate from one side of a membrane to the other.","definition_xrefs":["PMID:7914198","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"D-aspartate transmembrane transporter activity","termid":"GO:0140010"}


id: PR:Q9P6S2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6S2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.05","synonyms":[{"name":"Spom972h-SPBC27.05","type":"exact"}],"termid":"PR:Q9P6S2"}


id: PBO:0003946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase Pyr1","termid":"PBO:0003946"}


id: GO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a transposable element is incorporated into another DNA molecule such as a chromosome.","definition_xrefs":["PMID:10882723","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration (obsolete GO:0070893)","termid":"GO:0070893"}


id: PBO:0071708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 6","termid":"PBO:0071708"}


id: GO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by mitosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051329"}],"interesting_parent_ids":["GO:0008150","GO:0051329"],"is_obsolete":false,"name":"mitotic G1 phase","synonyms":[{"name":"G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000080"}


id: PR:Q9C0V9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32H8.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0589 protein C32H8.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.01c","synonyms":[{"name":"Spom972h-SPBC32H8.01c","type":"exact"}],"termid":"PR:Q9C0V9"}


id: GO:1902074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.","definition_xrefs":["GOC:mls","PMID:16666921","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt","synonyms":[{"name":"response to salinity","type":"narrow"}],"termid":"GO:1902074"}


id: PR:Q10146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease rrp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.01","synonyms":[{"name":"Spom972h-rrp6","type":"exact"},{"name":"ribosomal RNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10146"}


id: GO:0070074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle that forms part of the apical complex; a small, threadlike structure located is close proximity to the subpellicular microtubules. Its contents include a rhomboid protease (PfROM1 in Plasmodium falciparum) that moves from the lateral asymmetric localization to the merozoite apical pole and the posterior pole upon release of merozoites from schizonts.","definition_xrefs":["PMID:18048320","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mononeme","termid":"GO:0070074"}


id: PBO:0088788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rok1","termid":"PBO:0088788"}


id: PBO:0004178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor-like protein (predicted)","termid":"PBO:0004178"}


id: GO:1900260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:pf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of RNA-dependent RNA polymerase activity","termid":"GO:1900259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA-dependent RNA polymerase activity","synonyms":[{"name":"down regulation of PB1 proteins","type":"related"},{"name":"down regulation of PB2 proteins","type":"related"},{"name":"down regulation of RDRP","type":"related"},{"name":"down regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"down regulation of RNA replicase activity","type":"exact"},{"name":"down regulation of RNA synthetase activity","type":"related"},{"name":"down regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"down regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"down regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"down regulation of phage f2 replicase","type":"narrow"},{"name":"down regulation of polymerase L","type":"related"},{"name":"down regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"down regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"down regulation of ribonucleic replicase activity","type":"exact"},{"name":"down regulation of ribonucleic synthetase activity","type":"related"},{"name":"down regulation of transcriptase","type":"broad"},{"name":"down-regulation of PB1 proteins","type":"related"},{"name":"down-regulation of PB2 proteins","type":"related"},{"name":"down-regulation of RDRP","type":"related"},{"name":"down-regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"down-regulation of RNA replicase activity","type":"exact"},{"name":"down-regulation of RNA synthetase activity","type":"related"},{"name":"down-regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"down-regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"down-regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"down-regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"down-regulation of phage f2 replicase","type":"narrow"},{"name":"down-regulation of polymerase L","type":"related"},{"name":"down-regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"down-regulation of ribonucleic synthetase activity","type":"related"},{"name":"down-regulation of transcriptase","type":"broad"},{"name":"downregulation of PB1 proteins","type":"related"},{"name":"downregulation of PB2 proteins","type":"related"},{"name":"downregulation of RDRP","type":"related"},{"name":"downregulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"downregulation of RNA replicase activity","type":"exact"},{"name":"downregulation of RNA synthetase activity","type":"related"},{"name":"downregulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"downregulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"downregulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"downregulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"downregulation of phage f2 replicase","type":"narrow"},{"name":"downregulation of polymerase L","type":"related"},{"name":"downregulation of ribonucleic acid replicase activity","type":"exact"},{"name":"downregulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"downregulation of ribonucleic replicase activity","type":"exact"},{"name":"downregulation of ribonucleic synthetase activity","type":"related"},{"name":"downregulation of transcriptase","type":"broad"},{"name":"inhibition of PB1 proteins","type":"related"},{"name":"inhibition of PB2 proteins","type":"related"},{"name":"inhibition of RDRP","type":"related"},{"name":"inhibition of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"inhibition of RNA replicase activity","type":"exact"},{"name":"inhibition of RNA synthetase activity","type":"related"},{"name":"inhibition of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"inhibition of RNA-dependent RNA replicase activity","type":"exact"},{"name":"inhibition of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"inhibition of RNA-directed RNA polymerase activity","type":"narrow"},{"name":"inhibition of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"inhibition of phage f2 replicase","type":"narrow"},{"name":"inhibition of polymerase L","type":"related"},{"name":"inhibition of ribonucleic acid replicase activity","type":"exact"},{"name":"inhibition of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"inhibition of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"inhibition of ribonucleic replicase activity","type":"exact"},{"name":"inhibition of ribonucleic synthetase activity","type":"related"},{"name":"inhibition of transcriptase","type":"broad"},{"name":"negative regulation of 3D polymerase activity","type":"exact"},{"name":"negative regulation of PB1 proteins","type":"related"},{"name":"negative regulation of PB2 proteins","type":"related"},{"name":"negative regulation of RDRP","type":"related"},{"name":"negative regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"negative regulation of RNA replicase activity","type":"exact"},{"name":"negative regulation of RNA synthetase activity","type":"related"},{"name":"negative regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"negative regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"negative regulation of RNA-directed RNA polymerase activity","type":"broad"},{"name":"negative regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"negative regulation of phage f2 replicase","type":"narrow"},{"name":"negative regulation of polymerase L","type":"related"},{"name":"negative regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"negative regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"negative regulation of ribonucleic replicase activity","type":"exact"},{"name":"negative regulation of ribonucleic synthetase activity","type":"related"},{"name":"negative regulation of transcriptase","type":"broad"}],"termid":"GO:1900260"}


id: GO:0005326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of a neurotransmitter into, out of or within a cell, or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"neurotransmitter transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-374919","Reactome:R-HSA-374896"],"synonyms":[{"name":"neurotransmitter transporter activity","type":"related"}],"termid":"GO:0005326"}


id: GO:2001254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K36 trimethylation.","definition_xrefs":["PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K36 trimethylation (obsolete GO:2001254)","termid":"GO:2001254"}


id: PATO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer by virtue of the bearer's being shaped like a wing.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aliform","synonyms":[{"name":"wing-shaped","type":"exact"}],"termid":"PATO:0002236"}


id: GO:1902559
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"}]},"cv_name":"biological_process","definition":"The process in which 3'-phospho-5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["PMID:24296033","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-phosphoadenosine 5'-phosphosulfate transport","termid":"GO:0046963"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"3'-phospho-5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902559","terms_by_termid":{"GO:1990554":null}}


id: PBO:0064005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 39","termid":"PBO:0064005"}


id: PBO:0079409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 3","termid":"PBO:0079409"}


id: GO:0031644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nervous system process","synonyms":[{"name":"regulation of neurological process","type":"exact"},{"name":"regulation of neurological system process","type":"exact"},{"name":"regulation of neurophysiological process","type":"exact"}],"termid":"GO:0031644"}


id: PBO:0050038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 6 (pseudogene)","termid":"PBO:0050038"}


id: GO:0120263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heterochromatin organization.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin organization","termid":"GO:0120261"},{"relation_name":"is_a","term_name":"positive regulation of chromatin organization","termid":"GO:1905269"},{"relation_name":"positively_regulates","term_name":"heterochromatin organization","termid":"GO:0070828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"positive regulation of heterochromatin organization","synonyms":[{"name":"activation of heterochromatin organization","type":"narrow"},{"name":"stimulation of heterochromatin organization","type":"narrow"},{"name":"up regulation of heterochromatin organization","type":"exact"},{"name":"up-regulation of heterochromatin organization","type":"exact"},{"name":"upregulation of heterochromatin organization","type":"exact"}],"termid":"GO:0120263"}


id: PBO:0080703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7A","termid":"PBO:0080703"}


id: GO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response resulting from wounding.","definition_xrefs":["GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to wounding","synonyms":[{"name":"behavioural response to wounding","type":"exact"}],"termid":"GO:0002210"}


id: FYPO:0000171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which late endosome to vacuole transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal late endosome to vacuole transport","synonyms":[{"name":"abnormal late endosome to vacuole protein transport","type":"narrow"},{"name":"abnormal late endosome to vacuole transport during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome to vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000171"}


id: GO:1904386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["GOC:TermGenie","PMID:12112407","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-phenylalanine derivative","termid":"GO:1904386"}


id: PBO:0084510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of a complex (Isw1b) with Isw1p and Ioc2p; interacts directly with H3K36me3 nucleosomes through its PWWP domain to recruit the Isw1b complex to open reading frames in a Set2p-dependent manner; Isw1b exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing","termid":"PBO:0084510"}


id: GO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antimicrobial peptide from a cell or a tissue. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:11807545","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide secretion","termid":"GO:0002776"}


id: PBO:0088536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20","termid":"PBO:0088536"}


id: PBO:0074775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3H","termid":"PBO:0074775"}


id: MOD:00296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-D-glucuronosyl-L-serine.","definition_xrefs":["RESID:AA0291","PubMed:10858503","PubMed:7398618","Unimod:54#S","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glucuronylated residue","termid":"MOD:00447"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-D-glucuronosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(beta-D-glucopyranuronosyl)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcA) serine","type":"exact"},{"name":"Glucuronyl","type":"related"},{"name":"N-glucuronylation","type":"related"},{"name":"O-D-glucuronosyl-L-serine","type":"exact"},{"name":"O3-D-glucuronosyl-L-serine","type":"exact"}],"termid":"MOD:00296"}


id: PBO:0044962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7B","termid":"PBO:0044962"}


id: GO:0051930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of pain","termid":"GO:0051930"}


id: PBO:0049705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0049705"}


id: GO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase III promoter by the addition of ribonucleotides catalyzed by RNA polymerase III.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase III","synonyms":[{"name":"RNA elongation from Pol III promoter","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase III promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006385"}


id: FYPO:0006662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during G0 phase in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during G0","termid":"FYPO:0006667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"fragmented nucleus during G0","synonyms":[{"name":"degraded nucleus during cell quiescence","type":"related"},{"name":"fragmented nuclear DNA during G0","type":"related"},{"name":"fragmented nucleus during cell quiescence","type":"exact"},{"name":"fragmented nucleus during quiescence","type":"exact"},{"name":"loss of nuclear integrity during G0","type":"related"}],"termid":"FYPO:0006662"}


id: PBO:0002692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 6","termid":"PBO:0002692"}


id: GO:1902579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A localization which involves another organism.","definition_xrefs":["GOC:TermGenie","GO_REF:0000089","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism localization (obsolete GO:1902579)","synonyms":[{"name":"multi organism localization","type":"exact"}],"termid":"GO:1902579"}


id: PBO:0081761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF691 divergent transcript","termid":"PBO:0081761"}


id: GO:0033424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"CCG codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033424"}


id: PBO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 4","termid":"PBO:0051842"}


id: PBO:0086584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; emerging ORF that arose de novo from non-genic locus; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; localizes to mitochondria","termid":"PBO:0086584"}


id: GO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R3 and R4 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R3/R4 cell differentiation","termid":"GO:0048056"}


id: GO:0098721
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84669,91716],"is_not":false,"summary":null,"term":"GO:0098721"},{"annotations":[84317],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"The directed movement of uracil from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"uracil transmembrane transport","termid":"GO:1903791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902431"],"synonyms":[{"name":"uracil import into cell","type":"exact"}],"termid":"GO:0098721","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PBO:0030657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_glycoprotein_degradation","termid":"PBO:0030657"}


id: PBO:0074356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC3 pseudogene 1","termid":"PBO:0074356"}


id: PBO:0013454
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses rad1delta sensitivity to UV and hydroxyurea","termid":"PBO:0013454"}


id: GO:0030363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity required for the process of mRNA cleavage.","definition_xrefs":["PMID:10357856","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA cleavage factor activity (obsolete GO:0030363)","synonyms":[{"name":"pre-mRNA cleavage factor activity","type":"exact"}],"termid":"GO:0030363"}


id: PBO:0090051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12","termid":"PBO:0090051"}


id: GO:0034986
data:
  {"annotated_genes":["SJAG_03862","SJAG_01418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96726,110050],"is_not":false,"summary":null,"term":"GO:0034986"}]},"cv_name":"molecular_function","definition":"Directly binding to and delivering iron ions to a target protein.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01418":null,"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"iron chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9854984","Reactome:R-HSA-9854405"],"termid":"GO:0034986","terms_by_termid":{"GO:0034986":null}}


id: GO:0071199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP10 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Kv4.1-DPP10 channel complex","secondary_identifiers":["CORUM:601"],"synonyms":[{"name":"Kv4.1-DPPY channel complex","type":"exact"}],"termid":"GO:0071199"}


id: PBO:0038877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 4","termid":"PBO:0038877"}


id: GO:0085032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts an NF-kappaB-mediated signaling cascade in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host NF-kappaB cascade","synonyms":[{"name":"modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"related"},{"name":"modulation by symbiont of host NF-kappaB-mediated signal transduction pathway","type":"exact"},{"name":"pertubation of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"pertubation of host canonical NF-kappaB cascade","type":"related"},{"name":"symbiont-mediated pertubation of host canonical NF-kappaB cascade","type":"related"},{"name":"symbiont-mediated perturbation of host canonical NF-kappaB cascade","type":"related"}],"termid":"GO:0085032"}


id: GO:1990426
data:
  {"annotated_genes":["SJAG_02079","SJAG_02198","SJAG_01410","SJAG_04272","SJAG_01832","SJAG_03780","SJAG_01221","SJAG_02439","SJAG_01677","SJAG_01374","SJAG_03843","SJAG_02992","SJAG_02822","SJAG_01076","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85375,87140,90997,91246,92191,92347,94419,95109,95225,103898,103922,105253,105728,108686,112951],"is_not":false,"summary":null,"term":"GO:1990426"}]},"cv_name":"biological_process","definition":"Replication fork processing that includes recombination between DNA near the arrested fork and homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["PMID:23093942","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork processing","termid":"GO:0031297"},{"relation_name":"is_a","term_name":"mitotic DNA replication maintenance of fidelity","termid":"GO:1990505"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02439":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903211"],"synonyms":[{"name":"homologous recombination dependent replication fork recovery","type":"related"},{"name":"homologous recombination-dependent replication fork processing","type":"exact"},{"name":"mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"mitotic recombination involved in replication fork processing","type":"related"},{"name":"mitotic recombination involved in replication fork restart","type":"related"},{"name":"mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1990426","terms_by_termid":{"GO:1990426":null}}


id: PBO:0082605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone for Hsp40p; anchored in the ER membrane; with its homolog Ydj1p promotes ER-associated protein degradation (ERAD) of integral membrane substrates; similar to E. coli DnaJ","termid":"PBO:0082605"}


id: PBO:0063757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 2","termid":"PBO:0063757"}


id: PBO:0040983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 1","termid":"PBO:0040983"}


id: GO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Feeding behavior in a larval (immature) organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval feeding behavior","synonyms":[{"name":"larval feeding behaviour","type":"exact"}],"termid":"GO:0030536"}


id: GO:1904736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GOC:TermGenie","PMID:25416781","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid beta-oxidation","termid":"GO:0031999"},{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"},{"relation_name":"negatively_regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","synonyms":[{"name":"down regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"down-regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"downregulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"inhibition of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"narrow"}],"termid":"GO:1904736"}


id: PBO:0081453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 320","termid":"PBO:0081453"}


id: RO:0008505
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein one organism creates a structure or environment that is lived in by another organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creates_habitat_for","termid":"RO:0008505"}


id: PBO:0075383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 30","termid":"PBO:0075383"}


id: PBO:0063727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 2","termid":"PBO:0063727"}


id: PBO:0048219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 3","termid":"PBO:0048219"}


id: GO:0010152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The final stages of microgametogenesis after the trinucleate stage has been reached resulting in viable pollen grains.","definition_xrefs":["PMID:11595796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen maturation","termid":"GO:0010152"}


id: PBO:0070846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 25","termid":"PBO:0070846"}


id: PBO:0056962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR22 host gene","termid":"PBO:0056962"}


id: PBO:0079332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 18","termid":"PBO:0079332"}


id: GO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"platelet degranulation","synonyms":[{"name":"platelet exocytosis","type":"exact"}],"termid":"GO:0002576"}


id: GO:1990014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Square array of closely spaced intramembrane particles, 4-6 nm in size, that form supramolecular aggregates found in the plasma membrane of astrocytes, skeletal muscle and epithelial cells. They have been shown to contain aquaporins (water channels).","definition_xrefs":["PMID:22718347","NIF_Subcellular:sao1747012216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"orthogonal array","synonyms":[{"name":"OAP","type":"related"},{"name":"orthogonal array of particles","type":"exact"},{"name":"square array","type":"related"}],"termid":"GO:1990014"}


id: PBO:0058717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6845","termid":"PBO:0058717"}


id: GO:0048919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast development","termid":"GO:0048884"},{"relation_name":"part_of","term_name":"posterior lateral line development","termid":"GO:0048916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast development","termid":"GO:0048919"}


id: GO:1905067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GOC:BHF","GOC:bc","GOC:TermGenie","PMID:25034767","GOC:BHF_miRNA","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905067)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in heart development","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905067"}


id: PBO:0081397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 236","termid":"PBO:0081397"}


id: PBO:0056166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1 pseudogene 1","termid":"PBO:0056166"}


id: GO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a XCR1 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"XCR1 chemokine receptor binding","synonyms":[{"name":"XCR1 chemokine receptor ligand","type":"narrow"},{"name":"lymphotactin receptor binding","type":"exact"}],"termid":"GO:0031738"}


id: PBO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.1","termid":"PBO:0001496"}


id: GO:0005960
data:
  {"annotated_genes":["SJAG_03290","SJAG_03861","SJAG_02901","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83647,84888,92575,109193],"is_not":false,"summary":null,"term":"GO:0005960"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.","definition_xrefs":["MetaCyc:GCVMULTI-CPLX","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"glycine cleavage complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070015","GO:0005961","Wikipedia:Glycine_decarboxylase_complex"],"synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine decarboxylase complex","type":"exact"},{"name":"glycine dehydrogenase (decarboxylating) complex","type":"exact"},{"name":"glycine dehydrogenase complex (decarboxylating)","type":"related"},{"name":"glycine synthase complex","type":"exact"}],"termid":"GO:0005960","terms_by_termid":{"GO:0005960":null}}


