# terms

id: PBO:0070104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 18 pseudogene","termid":"PBO:0070104"}


id: PBO:0063033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 1","termid":"PBO:0063033"}


id: PBO:0050453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 1","termid":"PBO:0050453"}


id: GO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the periphery, in this case, any location in the body other than the thymus.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral T cell tolerance induction","synonyms":[{"name":"peripheral T lymphocyte tolerance induction","type":"exact"},{"name":"peripheral T-cell tolerance induction","type":"exact"},{"name":"peripheral T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002458"}


id: SO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified histidine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_histidine","secondary_identifiers":["MOD:00909"],"synonyms":[{"name":"ModHis","type":"exact"},{"name":"modified L histidine","type":"exact"},{"name":"modified L-histidine","type":"exact"}],"termid":"SO:0001398"}


id: GO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ser-tRNA(Ala).","definition_xrefs":["PMID:21285375","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0016787","GO:0016788","GO:0003824","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"Ser-tRNA(Ala) hydrolase activity","termid":"GO:0002196"}


id: PBO:0081333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 133","termid":"PBO:0081333"}


id: GO:0140430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a chromosome passenger complex localization to kinetochore.","definition_xrefs":["PMID:20739936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to kinetochore","termid":"GO:1905342"},{"relation_name":"positively_regulates","term_name":"chromosome passenger complex localization to kinetochore","termid":"GO:0072356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome passenger complex localization to kinetochore","termid":"GO:0140430"}


id: PBO:0027634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomeric_transcript_level","termid":"PBO:0027634"}


id: FYPO:0002239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length during vegetative growth","termid":"FYPO:0006464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000293"],"is_obsolete":false,"name":"shortened telomeres during vegetative growth","synonyms":[{"name":"decreased telomere length during vegetative growth","type":"exact"},{"name":"reduced telomere length during vegetative growth","type":"exact"},{"name":"short telomeres during vegetative growth","type":"exact"},{"name":"shortened telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002239"}


id: GO:0031983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane or protein that forms a vesicle.","definition_xrefs":["GOC:mah","GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"vesicle","termid":"GO:0031982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vesicle lumen","secondary_identifiers":["NIF_Subcellular:sao797538226"],"termid":"GO:0031983"}


id: GO:0036185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Definition: Catalysis of the reaction: 15-oxolipoxin A4 + NAD(P)H + H+ = 13,14-dihydro-15-oxolipoxin A4 + NAD(P)+.","definition_xrefs":["GOC:mw","PMID:10837478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"13-lipoxin reductase activity","secondary_identifiers":["Reactome:R-HSA-2161844"],"termid":"GO:0036185"}


id: PBO:0034415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_specification_of","termid":"PBO:0034415"}


id: PBO:0056937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-2","termid":"PBO:0056937"}


id: PBO:0064871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 4","termid":"PBO:0064871"}


id: FYPO:0003855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide). Cells stop growing (and may die) at a concentration of MTT that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to MTT","synonyms":[{"name":"hypersensitive to MTT","type":"exact"},{"name":"sensitive to 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"sensitive to MTT during mitotic cell cycle","type":"related"},{"name":"sensitive to MTT during vegetative growth","type":"exact"}],"termid":"FYPO:0003855"}


id: PBO:0038335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activity_directly_regulates_activity_of","termid":"PBO:0038335"}


id: GO:0035208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) that are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"positively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte proliferation","synonyms":[{"name":"activation of hemocyte proliferation","type":"narrow"},{"name":"positive regulation of arthropod blood cell proliferation","type":"exact"},{"name":"stimulation of hemocyte proliferation","type":"narrow"},{"name":"up regulation of hemocyte proliferation","type":"exact"},{"name":"up-regulation of hemocyte proliferation","type":"exact"},{"name":"upregulation of hemocyte proliferation","type":"exact"}],"termid":"GO:0035208"}


id: PBO:0065388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 2","termid":"PBO:0065388"}


id: PBO:0054022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1353","termid":"PBO:0054022"}


id: PBO:0035986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035986"}


id: PR:O94263
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03798","PANTHER:PTHR12708:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.14c","secondary_identifiers":["UniProtKB:O94263"],"synonyms":[{"name":"DNA polymerase II subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE2","type":"exact"}],"termid":"PR:O94263"}


id: PBO:0048568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 1","termid":"PBO:0048568"}


id: PBO:0051894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 3","termid":"PBO:0051894"}


id: GO:1904894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor signaling pathway via STAT.","definition_xrefs":["GOC:TermGenie","GOC:rjd","PMID:24587195","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"positively_regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of receptor signaling pathway via STAT","synonyms":[{"name":"activation of STAT cascade","type":"narrow"},{"name":"activation of STAT signalling pathway","type":"narrow"},{"name":"activation of kinase activated-STAT cascade","type":"narrow"},{"name":"activation of kinase-STAT cascade","type":"narrow"},{"name":"positive regulation of STAT signalling pathway","type":"exact"},{"name":"positive regulation of kinase activated-STAT cascade","type":"exact"},{"name":"positive regulation of kinase-STAT cascade","type":"exact"},{"name":"up regulation of STAT cascade","type":"exact"},{"name":"up regulation of STAT signalling pathway","type":"exact"},{"name":"up regulation of kinase activated-STAT cascade","type":"exact"},{"name":"up regulation of kinase-STAT cascade","type":"exact"},{"name":"up-regulation of STAT cascade","type":"exact"},{"name":"up-regulation of STAT signalling pathway","type":"exact"},{"name":"up-regulation of kinase activated-STAT cascade","type":"exact"},{"name":"up-regulation of kinase-STAT cascade","type":"exact"},{"name":"upregulation of STAT cascade","type":"exact"},{"name":"upregulation of STAT signalling pathway","type":"exact"},{"name":"upregulation of kinase activated-STAT cascade","type":"exact"},{"name":"upregulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904894"}


id: PBO:0028201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028201"}


id: GO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Location, by the male, of his partner's vulva when backing along the ventral side of the hermaphrodite during mating. The male stops at the vulva, coordinates his movements to the hermaphrodite's, and positions his tail precisely over the vulva so that he may insert his spicules and ejaculate.","definition_xrefs":["PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval location","termid":"GO:0034608"}


id: PBO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally silent transcript from tco1 locus","termid":"PBO:0002124"}


id: GO:0090008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypoblast over time, from its formation to the mature structure. The hypoblast is a tissue formed from the inner cell mass that lies beneath the epiblast.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoblast development","termid":"GO:0090008"}


id: PBO:0079805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B26, pseudogene","termid":"PBO:0079805"}


id: GO:0150054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic neurotransmitter receptor diffusion trapping.","definition_xrefs":["GOC:aruk","PMID:20935643","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0150054"}


id: PBO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 5","termid":"PBO:0048743"}


id: SO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that has been proven.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"validated","termid":"SO:0000789"}


id: GO:0071855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuropeptide receptor binding","termid":"GO:0071855"}


id: GO:0050006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose = 6-O-alpha-D-glucopyranosyl-D-fructofuranose.","definition_xrefs":["MetaCyc:ISOMALTULOSE-SYNTHASE-RXN","EC:5.4.99.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"isomaltulose synthase activity","secondary_identifiers":["RHEA:24032"],"synonyms":[{"name":"isomaltulose synthetase activity","type":"related"},{"name":"sucrose alpha-glucosyltransferase activity","type":"related"},{"name":"sucrose glucosylmutase activity","type":"related"},{"name":"trehalulose synthase activity","type":"related"}],"termid":"GO:0050006"}


id: GO:0102265
data:
  {"annotated_genes":["SJAG_03240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85662],"is_not":false,"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil47 in tRNA + NAD(P) = H+ + a uracil47 in tRNA + NAD(P)H.","definition_xrefs":["EC:1.3.1.89","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0016491","GO:0003824","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA-dihydrouridine47 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12457"],"termid":"GO:0102265","terms_by_termid":{"GO:0102265":null}}


id: PBO:0076436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 12","termid":"PBO:0076436"}


id: GO:1905079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cerebellar neuron development.","definition_xrefs":["PMID:26609159","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"cerebellar neuron development","termid":"GO:0098749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebellar neuron development","termid":"GO:1905079"}


id: SO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 12-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_12_signal","synonyms":[{"name":"minus 12 signal","type":"exact"}],"termid":"SO:0001673"}


id: GO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cellular protein complex assembly that results in the formation of a voltage-gated calcium channel complex.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"voltage-gated calcium channel complex assembly","termid":"GO:0070978"}


id: PBO:0076631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBL1X/Y related 1","termid":"PBO:0076631"}


id: PBO:0055138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2557","termid":"PBO:0055138"}


id: PBO:0091009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth2","termid":"PBO:0091009"}


id: GO:0033704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-5alpha-pregnane-20-one + NADP+ = 5alpha-pregnane-3,20-dione + H+ + NADPH.","definition_xrefs":["RHEA:18137","EC:1.1.1.278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3beta-hydroxy-5alpha-steroid dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.278-RXN","KEGG_REACTION:R07138"],"synonyms":[{"name":"3beta-hydroxy-5alpha-steroid:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0033704"}


id: MOD:00913
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-methionine residue","synonyms":[{"name":"ModMet","type":"exact"}],"termid":"MOD:00913"}


id: PBO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 1","termid":"PBO:0075733"}


id: GO:0075231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of spore movement on or near host (obsolete GO:0075231)","termid":"GO:0075231"}


id: MOD:01454
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-proline residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium.","definition_xrefs":["RESID:AA0494","PubMed:9030608","PubMed:10833024","PubMed:11847126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","synonyms":[{"name":"(1Z,2S)-2-carboxy-1-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]pyrrolidinium","type":"exact"},{"name":"DNA glycosylase proline Schiff base intermediate","type":"related"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium","type":"exact"}],"termid":"MOD:01454"}


id: FYPO:0003860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of miconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to miconazole","synonyms":[{"name":"resistance to miconazole during mitotic cell cycle","type":"related"},{"name":"resistance to miconazole during vegetative growth","type":"exact"},{"name":"resistant to miconazole","type":"exact"}],"termid":"FYPO:0003860"}


id: PATO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydont","termid":"PATO:0005008"}


id: GO:0016702
data:
  {"annotated_genes":["SJAG_00519","SJAG_00309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[108599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[86034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5164399","Reactome:R-HSA-9026408","EC:1.13.11.-","Reactome:R-HSA-2161917","Reactome:R-HSA-9020274","Reactome:R-HSA-9026918","Reactome:R-HSA-2161775","Reactome:R-HSA-2161907","Reactome:R-HSA-9018880"],"termid":"GO:0016702","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0102672":null}}


id: PBO:0066920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 222","termid":"PBO:0066920"}


id: PBO:0064430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 7","termid":"PBO:0064430"}


id: GO:0031925
data:
  {"annotated_genes":["SJAG_03808","SJAG_02962","SJAG_03652","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86349,86350,113597,114858],"is_not":false,"summary":null,"term":"GO:0031925"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxal from one side of a membrane to the other. Pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyridoxal transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal transporter activity","type":"broad"}],"termid":"GO:0031925","terms_by_termid":{"GO:0031925":null}}


id: PBO:0061216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8","termid":"PBO:0061216"}


id: GO:0017017
data:
  {"annotated_genes":["SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99968],"is_not":false,"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate.","definition_xrefs":["PMID:12184814","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine/serine/threonine phosphatase activity","termid":"GO:0008138"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0016788","GO:0004721","GO:0003824"],"is_obsolete":false,"name":"MAP kinase tyrosine/serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dual-specificity MAP kinase phosphatase activity","type":"exact"}],"termid":"GO:0017017","terms_by_termid":{"GO:0017017":null}}


id: PR:O14069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00355","PANTHER:PTHR10544:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.06c","secondary_identifiers":["UniProtKB:O14069"],"synonyms":[{"name":"Spom972h-RPL28","type":"exact"}],"termid":"PR:O14069"}


id: FYPO:0000143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of DNA-dependent transcription.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"transcription regulation phenotype","synonyms":[{"name":"fission yeast transcription regulation phenotype","type":"exact"},{"name":"gene-specific transcription regulation phenotype","type":"related"},{"name":"transcriptional control phenotype","type":"broad"}],"termid":"FYPO:0000143"}


id: GO:1903137
data:
  {"annotated_genes":["SJAG_05000","SJAG_01114","SJAG_03263","SJAG_04522","SJAG_02392","SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95598,103204,114418,92026,99966,103775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of MAPK cascade involved in cell wall organization or biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated MAPK cascade","termid":"GO:0032872"},{"relation_name":"regulates","term_name":"cell wall integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"regulation of Mpk1 cascade","type":"narrow"},{"name":"regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"regulation of Slt2 cascade","type":"narrow"},{"name":"regulation of cell integrity MAPK pathway","type":"exact"},{"name":"regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"}],"termid":"GO:1903137","terms_by_termid":{"GO:1903138":null}}


id: PBO:0013131
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PUS1","termid":"PBO:0013131"}


id: GO:0001405
data:
  {"annotated_genes":["SJAG_01615","SJAG_01597","SJAG_04014","SJAG_04432","SJAG_02077","SJAG_00373"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85736,95399,96470,99441,106046,107964],"is_not":false,"summary":null,"term":"GO:0001405"}]},"cv_name":"cellular_component","definition":"Protein complex located on the matrix side of the mitochondrial inner membrane and associated with the TIM23 mitochondrial import inner membrane translocase complex (GO:0005744); ATPase motor activity to drive import of proteins into the mitochondrial matrix.","definition_xrefs":["GOC:mcc","GOC:vw","PMID:14638855","PMID:14517234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"TIM23 mitochondrial import inner membrane translocase complex","termid":"GO:0005744"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_02077":null,"SJAG_04014":null,"SJAG_04432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"PAM complex, Tim23 associated import motor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAM complex","type":"exact"},{"name":"mitochondrial import motor","type":"exact"},{"name":"pre-sequence translocase-associated import motor","type":"exact"},{"name":"presequence translocase-associated import motor","type":"exact"}],"termid":"GO:0001405","terms_by_termid":{"GO:0001405":null}}


id: PBO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing with AAA domain 1 like","termid":"PBO:0051777"}


id: GO:0099154
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses serotonin as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"serotonergic synapse","termid":"GO:0099154"}


id: PBO:0085935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified ORF YDL010W; YDL009C is not an essential gene","termid":"PBO:0085935"}


id: PBO:0067319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 405, pseudogene","termid":"PBO:0067319"}


id: PBO:0087868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator that enhances pseudohyphal growth; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate; PHD1 has a paralog, SOK2, that arose from the whole genome duplication","termid":"PBO:0087868"}


id: PBO:0054308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1700","termid":"PBO:0054308"}


id: PBO:0080651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 G2 checkpoint kinase","termid":"PBO:0080651"}


id: GO:0055015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood out of the organ.","definition_xrefs":["GOC:devbiol","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell differentiation","termid":"GO:0055012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell development","synonyms":[{"name":"ventricular cardiomyocyte development","type":"exact"},{"name":"ventricular heart muscle cell development","type":"exact"}],"termid":"GO:0055015"}


id: PBO:0082801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex III; TRAPPIII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating endosome-Golgi traffic and required for membrane expansion during autophagy and the CVT pathway; directs Ypt1p to the PAS; late post-replication meiotic role","termid":"PBO:0082801"}


id: PBO:0070087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 1","termid":"PBO:0070087"}


id: PBO:0073289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 11","termid":"PBO:0073289"}


id: GO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter resulting in the increased frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","PMID:11523797"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061423)","termid":"GO:0061423"}


id: PBO:0082521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; member of the PAK (p21-activated kinase) family, along with Ste20p and Skm1p; involved in septin ring assembly, vacuole inheritance, cytokinesis, sterol uptake regulation; phosphorylates Cdc3p and Cdc10p; CLA4 has a paralog, SKM1, that arose from the whole genome duplication","termid":"PBO:0082521"}


id: PBO:0073418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senataxin","termid":"PBO:0073418"}


id: PBO:0077656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 8","termid":"PBO:0077656"}


id: GO:0038008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intracellular process in which a signal is passed on to downstream components within the cell via a tumor necrosis factor receptor-associated factor (TRAF). TRAFs are directly or indirectly recruited to the intracellular domains of cell surface receptors, and engage other signaling proteins to transfer the signal from a cell surface receptor to other intracellular signaling components.","definition_xrefs":["GOC:bf","PMID:19918944","PMID:20596822"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAF-mediated signal transduction (obsolete GO:0038008)","synonyms":[{"name":"TRAF signaling","type":"exact"},{"name":"TRAF-mediated intracellular signaling","type":"exact"},{"name":"TRAF-mediated signaling","type":"exact"},{"name":"TRAF-mediated signalling","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signal transduction","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signaling","type":"exact"}],"termid":"GO:0038008"}


id: PBO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2511","termid":"PBO:0055093"}


id: PBO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavonol reductase/cinnamoyl-CoA reductase family","termid":"PBO:0001801"}


id: PBO:0040487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 3","termid":"PBO:0040487"}


id: SO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uniparental disomy is a sequence_alteration where a diploid individual receives two copies for all or part of a chromosome from the mother and no copies of the same chromosome or region from the father.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UPD","termid":"SO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal_uniparental_disomy","synonyms":[{"name":"maternal uniparental disomy","type":"exact"}],"termid":"SO:0001745"}


id: GO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An eating behavior process whereby detection of a dietary excess results in a decrease in intake of nutrients.","definition_xrefs":["GOC:pr","PMID:12840200","PMID:12161655","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating behavior","termid":"GO:0042755"},{"relation_name":"part_of","term_name":"response to dietary excess","termid":"GO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reduction of food intake in response to dietary excess","termid":"GO:0002023"}


id: PBO:0068281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 2","termid":"PBO:0068281"}


id: GO:0052864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-deoxy-D-xylulose 5-phosphate, the 5-phospho derivative of 1-deoxy-D-xylulose. 1-deoxy-D-xylulose 5-phosphate is an intermediate in the non-mevalonate pathway and a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"1-deoxy-D-xylulose 5-phosphate metabolic process","termid":"GO:0052863"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-deoxy-D-xylulose 5-phosphate catabolic process","synonyms":[{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate breakdown","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate catabolic process","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate catabolism","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate degradation","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate breakdown","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate catabolism","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate degradation","type":"exact"}],"termid":"GO:0052864"}


id: PBO:0031180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitosis","termid":"PBO:0031180"}


id: PBO:0017889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc4/UbcP1","termid":"PBO:0017889"}


id: PBO:0012058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, possibly DNAJ","termid":"PBO:0012058"}


id: PBO:0075642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 1","termid":"PBO:0075642"}


id: PBO:0086880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; has homolog in Kluyveromyces lactis","termid":"PBO:0086880"}


id: PBO:0055775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss of heterozygosity on chromosome 1, region 1","termid":"PBO:0055775"}


id: PBO:0034227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-serially_homologous_to","termid":"PBO:0034227"}


id: PBO:0082828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein involved in autophagy and the Cvt pathway; undergoes conjugation with Atg12p to form a complex involved in Atg8p lipidation; Atg5p-Atg12p conjugate enhances E2 activity of Atg3 by rearranging its catalytic site, also forms a complex with Atg16p; the Atg5-Atg12/Atg16 complex binds to membranes and is essential for autophagosome formation; also involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0082828"}


id: PR:O59683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor IF-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor IF-2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.15c","secondary_identifiers":["UniProtKB:O59683"],"synonyms":[{"name":"IF-2(Mt) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IF-2Mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IF2(mt) (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTIF2","type":"exact"}],"termid":"PR:O59683"}


id: PBO:0044230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain containing 1","termid":"PBO:0044230"}


id: GO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:18329362","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"C-rich strand telomeric DNA binding","termid":"GO:0061730"}


id: PBO:0056825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14C, pseudogene","termid":"PBO:0056825"}


id: PBO:0004792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Cwf10 (predicted)","termid":"PBO:0004792"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: PBO:0080779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related X-linked","termid":"PBO:0080779"}


id: FYPO:0001598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which glutamine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal glutamine import","synonyms":[{"name":"normal L-glutamine import","type":"exact"},{"name":"normal L-glutamine import across plasma membrane","type":"exact"},{"name":"normal glutamine import during mitotic cell cycle","type":"related"},{"name":"normal glutamine import during vegetative growth","type":"exact"},{"name":"normal glutamine import into cell","type":"exact"},{"name":"normal glutamine uptake","type":"exact"}],"termid":"FYPO:0001598"}


id: PR:O94495
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15641:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.05c","secondary_identifiers":["UniProtKB:O94495"],"synonyms":[{"name":"SPBC18E5.05c","type":"related"},{"name":"Spom972h-ELP5","type":"exact"},{"name":"elp5","type":"related"},{"name":"protein iki1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94495"}


id: PATO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subterminal","termid":"PATO:0002475"}


id: PBO:0089246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ThrE amino acid transmembrane transporter family protein","termid":"PBO:0089246"}


id: GO:0030573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid metabolic process","termid":"GO:0008206"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"bile acid catabolic process","secondary_identifiers":["GO:0019613"],"synonyms":[{"name":"bile acid 7alpha-dehydroxylation pathway","type":"narrow"},{"name":"bile acid breakdown","type":"exact"},{"name":"bile acid catabolism","type":"exact"},{"name":"bile acid degradation","type":"exact"},{"name":"cholate catabolic process","type":"narrow"}],"termid":"GO:0030573"}


id: SO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic region that has an attribute.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_domain","synonyms":[{"name":"intron domain","type":"exact"}],"termid":"SO:0001014"}


id: GO:0009179
data:
  {"annotated_genes":["SJAG_04849","SJAG_00027","SJAG_02796","SJAG_00685","SJAG_03903","SJAG_00605","SJAG_04495","SJAG_00839","SJAG_03373","SJAG_02369","SJAG_06622","SJAG_02945","SJAG_02009","SJAG_03660","SJAG_02107","SJAG_01310","SJAG_04048","SJAG_00461","SJAG_04192","SJAG_03852","SJAG_00633","SJAG_02038","SJAG_02135","SJAG_04334","SJAG_03828","SJAG_06621","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[105097,105100,105566,105094,99804,101606,105099,90696,101972,101973,105563,105567,105565,105568,105095,94167,105564,94439,100616,101608,105098,105562,91186,101607,99545,112503,105096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[63688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[100619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107740,94356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[75077,72033],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside diphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate metabolic process","termid":"GO:0009135"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009179","terms_by_termid":{"GO:0006096":null,"GO:0006172":null,"GO:0045820":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: PBO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr2","termid":"PBO:0003776"}


id: GO:0035263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex-specific patterns of primoridia growth and differentiation in the genital imaginal disc. The anal primordium of the genital disc develops in both sexes, but depending on the genetic sex gives rise to either male or female analia. Depending on the genetic sex, only one of the two genital primordia develop. In females the female genital primordium develops and gives rise to the female genitalia whereas the male primordium is repressed. Conversely, in males the male genital primordium develops and gives rise to the male genitalia whereas the female genital primordium is repressed.","definition_xrefs":["PMID:11494318","PMID:11290302","PMID:11702781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc sexually dimorphic development","termid":"GO:0035263"}


id: GO:0018034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-alanine amide by hydrolysis and oxidation of an interior Ala-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0081"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-alanine amidation (obsolete GO:0018034)","termid":"GO:0018034"}


id: FYECO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing raffinose as the carbon source, yeast extract and other components. The concentration of sucrose is typically around 2%.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose YE","synonyms":[{"name":"sucrose rich medium","type":"broad"}],"termid":"FYECO:0000144"}


id: PBO:0030027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_centromere_clustering_at_nuclear_periphery","termid":"PBO:0030027"}


id: PBO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae VHT1","termid":"PBO:0015668"}


id: PBO:0069874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1161, pseudogene","termid":"PBO:0069874"}


id: GO:0018358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin via S-phytochromobilin-L-cysteine.","definition_xrefs":["RESID:AA0133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phytochromobilin linkage","termid":"GO:0017012"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phytochromobilin linkage via S-phytochromobilin-L-cysteine","secondary_identifiers":["GO:0018381"],"termid":"GO:0018358"}


id: PBO:0027933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0027933"}


id: PBO:0042312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD27 molecule","termid":"PBO:0042312"}


id: PBO:0089421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex WD repeat subunit Sop2","termid":"PBO:0089421"}


id: PBO:0075843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 4","termid":"PBO:0075843"}


id: GO:0052839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + inositol diphosphate tetrakisphosphate = ADP + inositol bisdiphosphate trisphosphate.","definition_xrefs":["PMID:11502751","PMID:18355727","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-1855230","Reactome:R-HSA-1855193"],"termid":"GO:0052839"}


id: PBO:0057129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 212","termid":"PBO:0057129"}


id: PBO:0090994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase/kynurenine-oxoglutarate transaminase","termid":"PBO:0090994"}


id: PBO:0059209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 1","termid":"PBO:0059209"}


id: PBO:0091432
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat for base excision activity of 1,N(6)-ethenoadenine = 5.3 x 10^-3 s-1","termid":"PBO:0091432"}


id: PBO:0005319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13b","termid":"PBO:0005319"}


id: PR:Q65ZA5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19D5.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q65ZA5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.10c","synonyms":[{"name":"Spom972h-SPAC19D5.10c","type":"exact"}],"termid":"PR:Q65ZA5"}


id: SO:00000000002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant within an upstream open reading frame.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_variant","termid":"SO:00000000002382"}


id: PBO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1941 family protein","termid":"PBO:0005231"}


id: PR:O14175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC E3 ubiquitin ligase complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.11","synonyms":[{"name":"Spom972h-dsc4","type":"exact"},{"name":"defective for SREBP cleavage protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14175"}


id: PBO:0029105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_valine_level","termid":"PBO:0029105"}


id: SO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A trinucleotide repeat region composed of GTT repeating elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trinucleotide_repeat_microsatellite_feature","termid":"SO:0000291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTT_trinucleotide_repeat","synonyms":[{"name":"d(GTT)","type":"exact"}],"termid":"SO:0001863"}


id: GO:0102287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + 3-oxooctanoyl-CoA + H2O = 4-coumaroylhexanoylmethane + 2 coenzyme A + carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"4-coumaroylhexanoylmethane synthase activity","secondary_identifiers":["MetaCyc:RXN-12668"],"termid":"GO:0102287"}


id: GO:0035598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) at the C2 of the adenosine ring of N6-threonylcarbomyladenosine (t6A) in tRNA, to form 2-methylthio-N6-threonylcarbamoyladenosine (ms2t6A).","definition_xrefs":["PMID:20584901","PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"N6-threonylcarbomyladenosine methylthiotransferase activity","secondary_identifiers":["Reactome:R-HSA-6786571"],"synonyms":[{"name":"t6A methylthiotransferase activity","type":"exact"}],"termid":"GO:0035598"}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: PR:000050516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the ssp2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC74.03c","termid":"PR:000050516"}


id: PBO:0005219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L12.1/L12A","termid":"PBO:0005219"}


id: PBO:0052148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel interacting protein 3","termid":"PBO:0052148"}


id: GO:0045595
data:
  {"annotated_genes":["SJAG_00993","SJAG_02392","SJAG_00514","SJAG_02169","SJAG_03581","SJAG_04853","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90749,92022,86065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[107363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[98445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[88363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation, the process in which relatively unspecialized cells acquire specialized structural and functional features.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045595","terms_by_termid":{"GO:0034307":null,"GO:0051517":null,"GO:0051519":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0063632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 10","termid":"PBO:0063632"}


id: GO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfite transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfite transport by transcription from RNA polymerase II promoter (obsolete GO:0100006)","termid":"GO:0100006"}


id: PBO:0085771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII-coated vesicles; forms a complex with Erv41p; involved in the membrane fusion stage of transport","termid":"PBO:0085771"}


id: PBO:0084154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity S-adenosylmethionine permease; required for utilization of S-adenosylmethionine as a sulfur source; has similarity to S-methylmethionine permease Mmp1p","termid":"PBO:0084154"}


id: GO:0060238
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of pheromone-dependent signal transduction during conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0000747"],"is_obsolete":false,"name":"regulation of signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060238","terms_by_termid":{"GO:0090029":null}}


id: PBO:0088361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Utp23","termid":"PBO:0088361"}


id: MOD:01606
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl 2-aminoadipic 6-phosphoric anhydride.","definition_xrefs":["RESID:AA0503","PubMed:19620981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl 2-aminoadipic 6-phosphoric anhydride","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)-6-oxo-6-(phosphonooxy)hexanoic acid","type":"exact"},{"name":"5-glutamyl 2-aminoadipic 6-phosphoric anhydride","type":"exact"}],"termid":"MOD:01606"}


id: PBO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cruciform cutting endonuclease Cce1","termid":"PBO:0002455"}


id: PBO:0090297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase/uracil phosphoribosyltransferase","termid":"PBO:0090297"}


id: GO:0045264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All non-F1 subunits of the plasma membrane hydrogen-transporting ATP synthase, including integral and peripheral plasma membrane proteins.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane proton-transporting ATP synthase complex","termid":"GO:0045260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane proton-transporting ATP synthase complex, coupling factor F(o)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(o)","type":"broad"}],"termid":"GO:0045264"}


id: PBO:0083848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp42p (EXOSC7)","termid":"PBO:0083848"}


id: GO:1903674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"}


id: PR:P04909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15226425","PMID:19965387","PomBase:MAH","PMID:21516229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha","termid":"PR:000027558"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.08c","secondary_identifiers":["UniProtKB:P04909","PR:000027559"],"synonyms":[{"name":"SPCC622.08C","type":"related"},{"name":"Spom972h-hta1","type":"exact"}],"termid":"PR:P04909"}


id: FYPO:0006318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is lower than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased DNA resection during replication fork processing","synonyms":[{"name":"decreased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"decreased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"decreased DNA resectioning during replication fork processing","type":"exact"},{"name":"decreased extent of DNA resection during replication fork processing","type":"exact"},{"name":"decreased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"},{"name":"reduced DNA resection during replication fork processing","type":"exact"}],"termid":"FYPO:0006318"}


id: PBO:0073538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2B","termid":"PBO:0073538"}


id: PATO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retracted","synonyms":[{"name":"moved ","type":"broad"},{"name":"retruded","type":"related"}],"termid":"PATO:0001477"}


id: PBO:0063193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 6","termid":"PBO:0063193"}


id: PBO:0067474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 605, pseudogene","termid":"PBO:0067474"}


id: MOD:00051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to N-acetyl-L-aspartic acid.","definition_xrefs":["PubMed:2395459","ChEBI:21547","PubMed:1560020","RESID:AA0042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-aspartic acid","synonyms":[{"name":"(2S)-2-(acetamido)butanedioic acid","type":"exact"},{"name":"2-(acetylamino)butanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)butanedioic acid","type":"exact"},{"name":"AcAsp","type":"exact"},{"name":"MOD_RES N-acetylaspartate","type":"exact"},{"name":"N-acetyl-L-aspartic acid","type":"exact"},{"name":"N-acetylated L-aspartic acid","type":"exact"},{"name":"acetylaspartic acid","type":"exact"}],"termid":"MOD:00051"}


id: PBO:0041681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dependent secretion activator 2","termid":"PBO:0041681"}


id: SO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a propeptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propeptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:propeptide","type":"exact"},{"name":"propeptide region of CDS","type":"exact"}],"termid":"SO:0002250"}


id: PBO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gpd2","termid":"PBO:0002478"}


id: GO:0000025
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97751,97752],"is_not":false,"summary":null,"term":"GO:0000025"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose metabolic process","termid":"GO:0000023"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"maltose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MALTOSECAT-PWY"],"synonyms":[{"name":"malt sugar catabolic process","type":"exact"},{"name":"malt sugar catabolism","type":"exact"},{"name":"maltose breakdown","type":"exact"},{"name":"maltose degradation","type":"exact"},{"name":"maltose hydrolysis","type":"narrow"}],"termid":"GO:0000025","terms_by_termid":{"GO:0000025":null}}


id: GO:0031801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 4 metabotropic glutamate receptor binding","synonyms":[{"name":"type 4 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031801"}


id: GO:0003369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of a mesendodermal cell.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in mesendodermal cell migration","termid":"GO:0003369"}


id: PBO:0046413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial mitogen","termid":"PBO:0046413"}


id: PBO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein (predicted)","termid":"PBO:0002634"}


id: PBO:0070980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 4","termid":"PBO:0070980"}


id: GO:0035556
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id: PBO:0084701
data:
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id: GO:0042339
data:
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id: PBO:0078158
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 36/delta variable 7","termid":"PBO:0078158"}


id: GO:0099080
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id: PBO:0030241
data:
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id: PBO:0042249
data:
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id: PBO:0058514
data:
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id: PBO:0044396
data:
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id: RO:0002473
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id: PBO:0058328
data:
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id: GO:0019602
data:
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id: PR:O14368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.02c","synonyms":[{"name":"16 kDa heat shock protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hsp16","type":"exact"}],"termid":"PR:O14368"}


id: PBO:0070132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 46 pseudogene","termid":"PBO:0070132"}


id: PBO:0052142
data:
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id: PBO:0052423
data:
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id: PBO:0005700
data:
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id: GO:0106117
data:
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id: GO:2001089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maltotriose transport","termid":"GO:2001089"}


id: PBO:0059101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 7","termid":"PBO:0059101"}


id: GO:0006228
data:
  {"annotated_genes":["SJAG_02887","SJAG_00964","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89596,96223,102674],"is_not":false,"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"UTP metabolic process","termid":"GO:0046051"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00964":null,"SJAG_02887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UTP anabolism","type":"exact"},{"name":"UTP biosynthesis","type":"exact"},{"name":"UTP formation","type":"exact"},{"name":"UTP synthesis","type":"exact"}],"termid":"GO:0006228","terms_by_termid":{"GO:0006228":null}}


id: GO:0050534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxyoctulosonyl-lipopolysaccharide + H2O = 3-deoxyoctulosonic acid + lipopolysaccharide.","definition_xrefs":["EC:3.2.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"3-deoxyoctulosonase activity","secondary_identifiers":["MetaCyc:RXN-12002"],"synonyms":[{"name":"3-deoxyoctulosonyl-lipopolysaccharide hydrolase activity","type":"related"},{"name":"alpha-Kdo-ase activity","type":"related"}],"termid":"GO:0050534"}


id: PBO:0089643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein","termid":"PBO:0089643"}


id: GO:0035216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the haltere imaginal disc over time, from its initial formation through to its metamorphosis to form the adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere disc development","termid":"GO:0035216"}


id: GO:0042620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl","PMID:9925580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyalkanoate) metabolic process","synonyms":[{"name":"PHA metabolic process","type":"broad"},{"name":"PHA metabolism","type":"broad"},{"name":"poly(3-hydroxyalkanoate) metabolism","type":"exact"}],"termid":"GO:0042620"}


id: GO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an HMG box domain, a protein domain that consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of which require the bending and unwinding of chromatin.","definition_xrefs":["InterPro:IPR009071","GOC:yaf","PMID:18445004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"HMG box domain binding","termid":"GO:0071837"}


id: GO:0099095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic anion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ligand-gated monoatomic anion channel activity","synonyms":[{"name":"ligand-gated anion channel activity","type":"broad"}],"termid":"GO:0099095"}


id: PBO:0030858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level_during_cellular_response_to_salt_stress","termid":"PBO:0030858"}


id: GO:0071675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mononuclear cell migration","termid":"GO:0071675"}


id: GO:0019896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in nerve cell axons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion transport along microtubule","termid":"GO:0047497"},{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"axonal transport of mitochondrion","synonyms":[{"name":"axon transport of mitochondria","type":"exact"}],"termid":"GO:0019896"}


id: PBO:0059667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 33","termid":"PBO:0059667"}


id: FYECO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfur was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited sulfur","synonyms":[{"name":"limited sulphur added","type":"exact"}],"termid":"FYECO:0000180"}


id: PBO:0058174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4469","termid":"PBO:0058174"}


id: PBO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin domain receptor tyrosine kinase 2","termid":"PBO:0044691"}


id: PBO:0085623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in ER-to-Golgi transport; packaged into COPII vesicles for trafficking between ER and Golgi","termid":"PBO:0085623"}


id: PBO:0072188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 5","termid":"PBO:0072188"}


id: PBO:0084004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine acyltransferase (GPCAT); involved in in phosphatidylcholine (PC) synthesis; uses acyl-CoA to acylate glycero-3-phosphocholine to yield lyso-PC; also catalyzes acylation of glycerophosphoethanolamine with acyl-CoA; predicted to be an integral membrane protein","termid":"PBO:0084004"}


id: GO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"positively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pteridine metabolic process","synonyms":[{"name":"activation of pteridine metabolic process","type":"narrow"},{"name":"positive regulation of pteridine metabolism","type":"exact"},{"name":"stimulation of pteridine metabolic process","type":"narrow"},{"name":"up regulation of pteridine metabolic process","type":"exact"},{"name":"up-regulation of pteridine metabolic process","type":"exact"},{"name":"upregulation of pteridine metabolic process","type":"exact"}],"termid":"GO:0045864"}


id: PBO:0046938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member C","termid":"PBO:0046938"}


id: FYPO:0001633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-phenylalanine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular phenylalanine level","termid":"FYPO:0001642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuolar phenylalanine level","synonyms":[{"name":"normal level of phenylalanine in vacuole","type":"exact"},{"name":"normal vacuolar L-phenylalanine level","type":"exact"},{"name":"normal vacuolar phenylalanine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar phenylalanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001633"}


id: PBO:0081732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 663, pseudogene","termid":"PBO:0081732"}


id: PR:O74437
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1682.06 gene.","definition_xrefs":["UniProtKB:O74437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1682.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.06","synonyms":[{"name":"Spom972h-SPCC1682.06","type":"exact"}],"termid":"PR:O74437"}


id: MOD:02004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-threonine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O3-acylated L-threonine","termid":"MOD:02004"}


id: PBO:0041144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 3","termid":"PBO:0041144"}


id: PBO:0067510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 650, pseudogene","termid":"PBO:0067510"}


id: GO:1901733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quercetin.","definition_xrefs":["UniPathway:UPA00724","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin catabolic process","synonyms":[{"name":"quercetin breakdown","type":"exact"},{"name":"quercetin catabolism","type":"exact"},{"name":"quercetin degradation","type":"exact"}],"termid":"GO:1901733"}


id: PBO:0072197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 14","termid":"PBO:0072197"}


id: GO:0061187
data:
  {"annotated_genes":["SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of rDNA heterochromatin formation.","definition_xrefs":["PMID:10388812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatin silencing at rDNA","type":"broad"},{"name":"regulation of ribosomal DNA heterochromatin assembly","type":"exact"}],"termid":"GO:0061187","terms_by_termid":{"GO:0061188":null}}


id: GO:0004816
data:
  {"annotated_genes":["SJAG_04856","SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98425,101224],"is_not":false,"summary":null,"term":"GO:0004816"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine + ATP + tRNA(Asn) = AMP + Asn-tRNA(Asn) + diphosphate + 2 H+.","definition_xrefs":["RHEA:11180","EC:6.1.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02517":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"asparagine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380227","KEGG_REACTION:R03648","MetaCyc:ASPARAGINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379996"],"synonyms":[{"name":"L-asparagine:tRNAAsn ligase (AMP-forming)","type":"related"},{"name":"asparagine translase activity","type":"related"},{"name":"asparaginyl transfer RNA synthetase activity","type":"related"},{"name":"asparaginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"asparaginyl-tRNA synthetase activity","type":"exact"},{"name":"asparaginyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"asparagyl-transfer RNA synthetase activity","type":"related"}],"termid":"GO:0004816","terms_by_termid":{"GO:0004816":null}}


id: GO:2000660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-1-mediated signaling pathway","termid":"GO:2000659"},{"relation_name":"negatively_regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"negative regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"negative regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"negative regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"negative regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000660"}


id: PBO:0048097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 18","termid":"PBO:0048097"}


id: PBO:0109817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein, Golgi vesicle transport factor Coy1","termid":"PBO:0109817"}


id: PBO:0087842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine synthase; conserved protein that catalyzes formation of threonine from O-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway","termid":"PBO:0087842"}


id: PBO:0047767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOS like 2, AP-1 transcription factor subunit","termid":"PBO:0047767"}


id: PBO:0082437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B subunit of DNA polymerase alpha-primase complex; required for initiation of DNA replication during mitotic and premeiotic DNA synthesis; also functions in telomere capping and length regulation","termid":"PBO:0082437"}


id: PATO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000194 spontaneous_activity (obsolete PATO:0000194)","termid":"PATO:0000194"}


id: GO:1903412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:BHF","GOC:TermGenie","GOC:rl","PMID:21757002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bile acid","termid":"GO:1903412"}


id: GO:0009488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing protein that acts as an electron carrier between methylamine dehydrogenase and cytochrome c.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete amicyanin (obsolete GO:0009488)","synonyms":[{"name":"amicyanin","type":"exact"}],"termid":"GO:0009488"}


id: PR:Q9UT17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.11","synonyms":[{"name":"Spom972h-SPAC9.11","type":"exact"}],"termid":"PR:Q9UT17"}


id: PBO:0063528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 9","termid":"PBO:0063528"}


id: PBO:0063112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)-specific ribonuclease","termid":"PBO:0063112"}


id: PBO:0042262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5 pseudogene 1","termid":"PBO:0042262"}


id: PBO:0052246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 15","termid":"PBO:0052246"}


id: FYPO:0006914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on terconazole","synonyms":[{"name":"normal cell population growth in presence of terconazole","type":"exact"},{"name":"normal cell population growth on terconazole","type":"exact"},{"name":"normal cellular response to terconazole","type":"related"},{"name":"normal vegetative cell population growth on terconazole","type":"exact"}],"termid":"FYPO:0006914"}


id: GO:0019021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of deoxyribonucleic acid.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA viral genome (obsolete GO:0019021)","termid":"GO:0019021"}


id: GO:0120239
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The carbohydrate-rich layer lining the vascular endothelium connected to the endothelium through a variety of molecules, mainly proteoglycans and glycoproteins. These form a network in which soluble molecules, either plasma- or endothelium-derived, are incorporated.","definition_xrefs":["GOC:krc","PMID:17256154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vascular endothelial glycocalyx","synonyms":[{"name":"endothelial glycocalyx","type":"exact"}],"termid":"GO:0120239"}


id: PBO:0004431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex bromodomain subunit Spt7","termid":"PBO:0004431"}


id: PBO:0086619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086619"}


id: PATO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior to","synonyms":[{"name":"posterior (human torso)","type":"exact"},{"name":"superior (human head)","type":"exact"}],"termid":"PATO:0001633"}


id: PBO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport (predicted)","termid":"PBO:0005153"}


id: PR:Q10364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.14c","synonyms":[{"name":"Spom972h-sck2","type":"exact"}],"termid":"PR:Q10364"}


id: PBO:0088418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4050 family protein, conserved in fungi and plants","termid":"PBO:0088418"}


id: PBO:0073735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 3","termid":"PBO:0073735"}


id: PBO:0071576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 5","termid":"PBO:0071576"}


id: PBO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CDRE 5'-AGCCTC-3'","termid":"PBO:0000592"}


id: PATO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A colour that is very pale yellowish brown.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light yellow brown","termid":"PATO:0002413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige","termid":"PATO:0002410"}


id: GO:0030233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes transport of all four deoxy (d) NDPs, and, less efficiently, the corresponding dNTPs, in exchange for dNDPs, ADP, or ATP.","definition_xrefs":["PMID:11226231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"deoxynucleotide transmembrane transporter activity","termid":"GO:0030233"}


id: PBO:0084594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL012C-A was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL012C/VTC4","termid":"PBO:0084594"}


id: PBO:0014293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein Scs2","termid":"PBO:0014293"}


id: PBO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6, chromatin remodeling factor","termid":"PBO:0046481"}


id: GO:0035323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intercellular bridge that connects the germline cells of a male cyst.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline ring canal","termid":"GO:0045172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"male germline ring canal","synonyms":[{"name":"spermatocyte ring canal","type":"narrow"},{"name":"testicular ring canal","type":"narrow"}],"termid":"GO:0035323"}


id: PBO:0053203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 2","termid":"PBO:0053203"}


id: PBO:0056280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2B member 2","termid":"PBO:0056280"}


id: MOD:01140
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two iodine atoms.","definition_xrefs":["DeltaMass:0","PubMed:15627961","Unimod:130#Y","OMSSA:35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diiodinated residue","termid":"MOD:00501"},{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diiodinated tyrosine","synonyms":[{"name":"3,5-Diiodination (of Tyrosine)","type":"exact"},{"name":"Diiodo","type":"related"},{"name":"I2Tyr","type":"exact"},{"name":"di-Iodination","type":"related"},{"name":"diiodinationy","type":"exact"}],"termid":"MOD:01140"}


id: PBO:0029857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spheroid_vegetative_cell","termid":"PBO:0029857"}


id: GO:0031365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the N-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid modification","secondary_identifiers":["GO:0018409"],"synonyms":[{"name":"peptide or protein amino-terminal blocking","type":"related"},{"name":"peptide/protein amino-terminal blocking","type":"related"}],"termid":"GO:0031365"}


id: GO:0007076
data:
  {"annotated_genes":["SJAG_03048","SJAG_00871","SJAG_05193","SJAG_03682","SJAG_03161","SJAG_03942","SJAG_01873","SJAG_03567","SJAG_03832","SJAG_05032","SJAG_00768","SJAG_00646","SJAG_01837","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87965,93929,99336,100785,102346,108214,109553,112061,112677,113826],"is_not":false,"summary":null,"term":"GO:0007076"},{"annotations":[107848,84231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990893"},{"annotations":[112827,98537],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03682":null,"SJAG_03832":null,"SJAG_03942":null,"SJAG_05032":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007076","terms_by_termid":{"GO:0007076":null,"GO:1903380":null,"GO:1990893":null}}


id: GO:0060205
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a cytoplasmic vesicle.","definition_xrefs":["GOC:vesicles","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle lumen","termid":"GO:0031983"},{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic vesicle lumen","synonyms":[{"name":"cytoplasmic membrane-bounded vesicle lumen","type":"related"},{"name":"cytoplasmic membrane-enclosed vesicle lumen","type":"related"}],"termid":"GO:0060205"}


id: PBO:0002619
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.4","termid":"PBO:0002619"}


id: PBO:0000890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein (predicted)","termid":"PBO:0000890"}


id: PBO:0088102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ureidoglycolate lyase; converts ureidoglycolate to glyoxylate and urea in the third step of allantoin degradation; expression is sensitive to nitrogen catabolite repression; this enzyme is sometimes referred to 'ureidoglycolate hydrolase' but should not be confused with the Arabidopsis thaliana ureidoglycolate hydrolase enzyme which converts ureidoglycolate to glyoxylate, ammonia and carbon dioxide","termid":"PBO:0088102"}


id: GO:0004805
data:
  {"annotated_genes":["SJAG_01531","SJAG_00129","SJAG_01646","SJAG_01427","SJAG_01862","SJAG_00182"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73434,88028,89521,92701,93320,97216],"is_not":false,"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose 6-phosphate + H2O = alpha,alpha-trehalose + phosphate.","definition_xrefs":["EC:3.1.3.12","RHEA:23420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"trehalose-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TREHALOSEPHOSPHA-RXN"],"synonyms":[{"name":"trehalose 6-phosphatase activity","type":"related"},{"name":"trehalose 6-phosphate phosphatase activity","type":"related"},{"name":"trehalose phosphatase activity","type":"exact"},{"name":"trehalose-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004805","terms_by_termid":{"GO:0004805":null}}


id: PBO:0071084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 86","termid":"PBO:0071084"}


id: SO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that consists of at least three copies of the pentanucleotide NGAAN, bound by the heat shock transcription factor HSF.","definition_xrefs":["PMID:8689565","PMID:17347150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSE","synonyms":[{"name":"heat shock element","type":"exact"}],"termid":"SO:0001850"}


id: PBO:0041884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 2 pseudogene 1","termid":"PBO:0041884"}


id: PR:O94290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf29 gene.","definition_xrefs":["UniProtKB:O94290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component ist3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.05c","synonyms":[{"name":"RNA-binding protein cwf29 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cwf29","type":"exact"},{"name":"complexed with cdc5 protein 29 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94290"}


id: GO:0015989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of protons against an electrochemical gradient, using energy from light.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete light-driven proton transport (obsolete GO:0015989)","termid":"GO:0015989"}


id: PBO:0091234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall structural constituent Isp3","termid":"PBO:0091234"}


id: PBO:0067368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 469, pseudogene","termid":"PBO:0067368"}


id: GO:0008607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme phosphorylase kinase.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"phosphorylase kinase regulator activity","synonyms":[{"name":"phosphorylase kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008607"}


id: GO:0008839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + NAD(P)+ + H2O = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + NAD(P)H + H+.","definition_xrefs":["EC:1.17.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate reductase","secondary_identifiers":["MetaCyc:RXN-14014"],"synonyms":[{"name":"2,3,4,5-tetrahydrodipicolinate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"dihydrodipicolinate reductase activity","type":"exact"},{"name":"dihydrodipicolinic acid reductase activity","type":"related"}],"termid":"GO:0008839"}


id: PBO:0080895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTHDF3 divergent transcript","termid":"PBO:0080895"}


id: GO:0036012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the cyanelle envelope; also faces the cyanelle stroma.","definition_xrefs":["GOC:aa","PMID:18976493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"cyanelle membrane","termid":"GO:0033113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle inner membrane","synonyms":[{"name":"cyanelle inner envelope membrane","type":"exact"}],"termid":"GO:0036012"}


id: PBO:0076775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor and KH domain containing","termid":"PBO:0076775"}


id: GO:0032283
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An acetate CoA-transferase complex located in the stroma of a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate CoA-transferase complex","termid":"GO:0009329"},{"relation_name":"part_of","term_name":"plastid acetyl-CoA carboxylase complex","termid":"GO:0032282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plastid acetate CoA-transferase complex","termid":"GO:0032283"}


id: GO:0051015
data:
  {"annotated_genes":["SJAG_03086","SJAG_01964","SJAG_02245","SJAG_00152","SJAG_00970","SJAG_04100","SJAG_03703","SJAG_02075","SJAG_04001","SJAG_00938","SJAG_04498","SJAG_01894","SJAG_02566","SJAG_02431","SJAG_01268","SJAG_03088","SJAG_01993","SJAG_00677","SJAG_04621","SJAG_03025","SJAG_01384","SJAG_03380","SJAG_02396","SJAG_03011","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69084,69270,69340,69947,70738,72522,73314,73927,74714,75279,75401,75633,75740,76281,76701,76749,77267,77918,78000,78116,78594,78640,78874,79004],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[76193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin binding","termid":"GO:0003779"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003779"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0003779","GO:0005488"],"is_obsolete":false,"name":"actin filament binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"F-actin binding","type":"exact"},{"name":"actin cross-linking activity","type":"related"}],"termid":"GO:0051015","terms_by_termid":{"GO:0003786":null,"GO:0051015":null}}


id: PBO:0048953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 4","termid":"PBO:0048953"}


id: GO:0014708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitomeric trunk muscle development.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: GO:0090079
data:
  {"annotated_genes":["SJAG_04959","SJAG_02812","SJAG_04157","SJAG_04862","SJAG_02043","SJAG_00507","SJAG_00662","SJAG_02390","SJAG_05332","SJAG_00466","SJAG_03732","SJAG_03678","SJAG_01851","SJAG_03629","SJAG_03147","SJAG_02738","SJAG_01954","SJAG_03232","SJAG_02164","SJAG_04981","SJAG_01659","SJAG_00786","SJAG_01576","SJAG_05000","SJAG_02189","SJAG_02601","SJAG_03550","SJAG_05271","SJAG_02628","SJAG_01696","SJAG_03461","SJAG_01487","SJAG_04900","SJAG_03472","SJAG_04283","SJAG_04772","SJAG_05003","SJAG_04744","SJAG_00338","SJAG_05221","SJAG_03788","SJAG_01643","SJAG_02307","SJAG_02856","SJAG_04891","SJAG_01518","SJAG_03433","SJAG_01813","SJAG_02471","SJAG_02995","SJAG_02180","SJAG_02493","SJAG_03996","SJAG_00308","SJAG_01117","SJAG_02376","SJAG_01517","SJAG_02017","SJAG_03223","SJAG_02353","SJAG_04635","SJAG_01438"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000900"},{"annotations":[95606,98070,94871,84794,108837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008494"},{"annotations":[114592,91302,108313,91519,91301,89784,108575,89786,115062,108574,114594,71837,105338,115061,105339,94475,108576,109036,94476,99044,110875,114593,89785,113097,107689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003746"},{"annotations":[92841,100219,101474,83753,93030,107503,93966,95092,101770,90961,101746,86107,92047,103472,106787,101765,98789,110149,100915,96255,93906,101571,88955,111761,94556,93411,86565,96656,99381,103179,93986,106873,86145,92759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003743"},{"annotations":[113625,112186,92117,94820,87282,98228,103339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[94821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[87283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"},{"annotations":[91304,105340,105341,100862,91303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008079"}]},"cv_name":"molecular_function","definition":"Any selective and non-covalent interaction with a nucleic acid involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.","definition_xrefs":["GOC:dph","GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"},{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00786":null,"SJAG_01117":null,"SJAG_01438":null,"SJAG_01487":null,"SJAG_01517":null,"SJAG_01518":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01696":null,"SJAG_01813":null,"SJAG_01851":null,"SJAG_01954":null,"SJAG_02017":null,"SJAG_02043":null,"SJAG_02164":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02307":null,"SJAG_02353":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02493":null,"SJAG_02601":null,"SJAG_02628":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03232":null,"SJAG_03433":null,"SJAG_03461":null,"SJAG_03472":null,"SJAG_03550":null,"SJAG_03629":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03996":null,"SJAG_04157":null,"SJAG_04283":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04862":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04959":null,"SJAG_04981":null,"SJAG_05000":null,"SJAG_05003":null,"SJAG_05221":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0045182"],"is_obsolete":false,"name":"translation regulator activity, nucleic acid binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090079","terms_by_termid":{"GO:0000900":null,"GO:0003743":null,"GO:0003746":null,"GO:0003747":null,"GO:0008079":null,"GO:0008494":null,"GO:0016149":null,"GO:0016150":null}}


id: PBO:0065349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked","termid":"PBO:0065349"}


id: GO:0033303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of O-glucosylated derivatives of quercetin.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"quercetin O-glucoside metabolic process","termid":"GO:0033302"},{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin O-glucoside biosynthetic process","synonyms":[{"name":"quercetin O-glucoside anabolism","type":"exact"},{"name":"quercetin O-glucoside biosynthesis","type":"exact"},{"name":"quercetin O-glucoside formation","type":"exact"},{"name":"quercetin O-glucoside synthesit","type":"exact"}],"termid":"GO:0033303"}


id: GO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + pentanamide = NH4 + valerate.","definition_xrefs":["EC:3.5.1.50","RHEA:10000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"pentanamidase activity","secondary_identifiers":["KEGG_REACTION:R02938","MetaCyc:PENTANAMIDASE-RXN"],"synonyms":[{"name":"pentanamide amidohydrolase activity","type":"related"},{"name":"valeramidase activity","type":"related"}],"termid":"GO:0050168"}


id: GO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of single stranded viral RNA replication via double stranded DNA intermediate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral genome replication","termid":"GO:0045071"},{"relation_name":"is_a","term_name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0045091"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"down regulation of retroviral genome replication","type":"exact"},{"name":"down-regulation of retroviral genome replication","type":"exact"},{"name":"downregulation of retroviral genome replication","type":"exact"},{"name":"inhibition of retroviral genome replication","type":"narrow"},{"name":"negative regulation of retroviral genome replication","type":"exact"},{"name":"regulation of retroviral genome replication","type":"related"}],"termid":"GO:0045869"}


id: PATO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000873 cataleptic (obsolete PATO:0000873)","termid":"PATO:0000873"}


id: PBO:0035821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0035821"}


id: PBO:0075576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPIN4 antisense RNA 1","termid":"PBO:0075576"}


id: GO:0047957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formononetin + NADPH + O2 = 2'-hydroxyformononetin + NADP+ + H2O.","definition_xrefs":["MetaCyc:ISOFLAVONE-2-HYDROXYLASE-RXN","EC:1.14.14.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4'-methoxyisoflavone 2'-hydroxylase activity","secondary_identifiers":["RHEA:12388"],"synonyms":[{"name":"formononetin,NADPH:oxygen oxidoreductase (2'-hydroxylating)","type":"related"},{"name":"isoflavone 2'-monooxygenase activity","type":"broad"}],"termid":"GO:0047957"}


id: GO:1901016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of potassium ion transmembrane transporter activity","synonyms":[{"name":"regulation of potassium transporter activity","type":"exact"}],"termid":"GO:1901016"}


id: PR:O94713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.14c","synonyms":[{"name":"Spom972h-meu27","type":"exact"}],"termid":"PR:O94713"}


id: GO:0070314
data:
  {"annotated_genes":["SJAG_00690","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88991,105845],"is_not":false,"summary":null,"term":"GO:0070314"}]},"cv_name":"biological_process","definition":"A cell cycle arrest process that results in arrest during G1 phase, whereupon the cell enters a specialized resting state known as G0 or quiescence.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"G1 to G0 transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G1/G0 transition","type":"exact"},{"name":"cell cycle quiescence","type":"related"},{"name":"establishment of cell quiescence","type":"exact"},{"name":"stationary phase","type":"related"}],"termid":"GO:0070314","terms_by_termid":{"GO:0070314":null}}


id: _global:results_in_formation_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a entity and its participation in a process whereby at the beginning of the process the entity does not exist and at the end of the process the entity exists.","definition_xrefs":["GOC:mtg_berkeley_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has_output","termid":"RO:0002234"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_output","termid":"_global:has_output"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_formation_of","secondary_identifiers":["GOREL:0001020","RO:0002297"],"termid":"_global:results_in_formation_of"}


id: PBO:0079493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC12 antisense RNA 1","termid":"PBO:0079493"}


id: PBO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member A","termid":"PBO:0039596"}


id: GO:0061965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["PMID:27689881","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of entry into reproductive diapause","termid":"GO:0061963"},{"relation_name":"positively_regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of entry into reproductive diapause","termid":"GO:0061965"}


id: PBO:0083725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 113 kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; interacts with and functions as a downstream effector of active, GTP-bound Sec4p, a Rab family GTPase","termid":"PBO:0083725"}


id: PBO:0080153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"versican","termid":"PBO:0080153"}


id: PBO:0086679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; deletion exhibits slow-growth phenotype; computationally predicted to have a role in cell budding","termid":"PBO:0086679"}


id: GO:0046258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic 2,4,6-trinitrotoluene metabolic process","termid":"GO:0018975"},{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene catabolic process","termid":"GO:0046256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic 2,4,6-trinitrotoluene catabolic process","synonyms":[{"name":"anaerobic 2,4,6-trinitrotoluene breakdown","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene catabolism","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene degradation","type":"exact"}],"termid":"GO:0046258"}


id: PBO:0060640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 3","termid":"PBO:0060640"}


id: PBO:0029504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_elongated_germ_tubes_(obsolete_FYPO:0002211)","termid":"PBO:0029504"}


id: PBO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase (predicted)","termid":"PBO:0002028"}


id: GO:2000653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic imprinting.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of genetic imprinting (obsolete GO:2000653)","synonyms":[{"name":"regulation of DNA imprinting","type":"exact"}],"termid":"GO:2000653"}


id: PBO:0034419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulation_by_(obsolete_requires_regulation_by)","termid":"PBO:0034419"}


id: PBO:0085269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal adenine nucleotide transporter; involved in beta-oxidation of medium-chain fatty acid; required for peroxisome proliferation","termid":"PBO:0085269"}


id: PBO:0029398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm","termid":"PBO:0029398"}


id: PBO:0082972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation","termid":"PBO:0082972"}


id: PBO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin family protein","termid":"PBO:0090192"}


id: GO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIID complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TFIID-class transcription factor complex binding","synonyms":[{"name":"TFIID-class transcription factor binding","type":"exact"}],"termid":"GO:0001094"}


id: GO:0009694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving jasmonic acid, a fatty acid derivative with the formula (1R-(1 alpha, 2 beta(Z)))-3-oxo-2-(2-pentenyl)cyclopentaneacetic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"jasmonic acid metabolic process","synonyms":[{"name":"jasmonic acid metabolism","type":"exact"}],"termid":"GO:0009694"}


id: PBO:0088340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex/exosome interacting GTPase Ski7","termid":"PBO:0088340"}


id: FYPO:0005866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 at ribosomal DNA is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at rDNA during vegetative growth","synonyms":[{"name":"normal histone H3-K9 methylation at rDNA during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"normal histone H3K9me at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005866"}


id: GO:0044689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + S-adenosyl-L-methionine = 5'-deoxyadenosine + 7,8-didemethyl-8-hydroxy-5-deazariboflavin + H+ + L-methionine + NH4+.","definition_xrefs":["PMID:14593448","RHEA:55204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity","secondary_identifiers":["EC:4.3.1.32","MetaCyc:RXN-19230"],"synonyms":[{"name":"FO synthase","type":"exact"}],"termid":"GO:0044689"}


id: PBO:0066131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 9","termid":"PBO:0066131"}


id: PBO:0043836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1A","termid":"PBO:0043836"}


id: GO:0102960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-9beta-pimara-7,15-diene-19,6beta-olide + NAD(P) = momilactone A + H+ + NAD(P)H.","definition_xrefs":["GOC:pz","RHEA:25367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"momilactone-A synthase activity","secondary_identifiers":["EC:1.1.1.295","MetaCyc:RXN-9290"],"termid":"GO:0102960"}


id: GO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte homeostasis","synonyms":[{"name":"immune cell homeostasis","type":"exact"},{"name":"leucocyte homeostasis","type":"exact"}],"termid":"GO:0001776"}


id: RO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_overlaps","termid":"RO:0002490"}


id: GO:0033033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid cell apoptotic process","synonyms":[{"name":"down regulation of myeloid cell apoptosis","type":"exact"},{"name":"down-regulation of myeloid cell apoptosis","type":"exact"},{"name":"downregulation of myeloid cell apoptosis","type":"exact"},{"name":"inhibition of myeloid cell apoptosis","type":"narrow"},{"name":"negative regulation of myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033033"}


id: GO:0060900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic camera-type eye formation","termid":"GO:0060900"}


id: PBO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol kinase-related protein Tra2","termid":"PBO:0000244"}


id: PBO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 8","termid":"PBO:0061287"}


id: PBO:0055669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA in non-homologous end joining pathway 1","termid":"PBO:0055669"}


id: GO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via modification of peptidyl-cysteine to peptidyl-L-cysteine persulfide.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via cysteine modification to L-cysteine persulfide (obsolete GO:0018192)","synonyms":[{"name":"enzyme active site formation via L-cysteine persulphide","type":"exact"}],"termid":"GO:0018192"}


id: GO:0016422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + m(7)G(5')pppAm = S-adenosyl-L-homocysteine + m(7)G(5')pppm(6)Am.","definition_xrefs":["EC:2.1.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.62-RXN","RHEA:22744"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate 2'-O-methyladenosine NG-methyltransferase activity","type":"related"}],"termid":"GO:0016422"}


id: GO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing electron carrier acting between cytochrome b(6)-f and P700 of photosystem I.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plastocyanin (obsolete GO:0015006)","synonyms":[{"name":"plastocyanin","type":"exact"}],"termid":"GO:0015006"}


id: PR:O94252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.02","synonyms":[{"name":"Spom972h-rng9","type":"exact"}],"termid":"PR:O94252"}


id: GO:0070131
data:
  {"annotated_genes":["SJAG_01517","SJAG_04959","SJAG_03550","SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94869,98068,108836],"is_not":false,"summary":null,"term":"GO:0070131"},{"annotations":[96611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"positively_regulates","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_03550":null,"SJAG_04959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mitochondrial translation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial protein anabolism","type":"exact"},{"name":"positive regulation of mitochondrial protein biosynthesis","type":"exact"},{"name":"positive regulation of mitochondrial protein formation","type":"exact"},{"name":"positive regulation of mitochondrial protein synthesis","type":"exact"}],"termid":"GO:0070131","terms_by_termid":{"GO:0070131":null,"GO:0070134":null}}


id: PBO:0005524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp5","termid":"PBO:0005524"}


id: GO:0070771
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase c-Src.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-Src complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-SRC complex","type":"narrow"}],"termid":"GO:0070771"}


id: PBO:0030481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_GTP_binding","termid":"PBO:0030481"}


id: MOD:02019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-timnodonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-timnodonoylated residue","termid":"MOD:02020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-timnodonoyl-L-lysine","termid":"MOD:02019"}


id: PBO:0086451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane glycoprotein; has strong similarity to Vth1p and Pep1p/Vps10p; may be involved in vacuolar protein sorting","termid":"PBO:0086451"}


id: FYPO:0007019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 7-methylguanosine is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal tRNA guanosine 7-methylation","synonyms":[{"name":"normal 7-methylguanosine level in tRNA","type":"related"},{"name":"normal tRNA 7-methylguanosine formation","type":"exact"},{"name":"normal tRNA guanosine 7-methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA guanosine 7-methylation during vegetative growth","type":"exact"},{"name":"normal tRNA m7G formation","type":"exact"}],"termid":"FYPO:0007019"}


id: PBO:0069690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 969, pseudogene","termid":"PBO:0069690"}


id: GO:0080146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + H2O = ammonia + pyruvate + hydrogen sulfide + H+.","definition_xrefs":["MetaCyc:LCYSDESULF-RXN","PMID:19955263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-cysteine desulfhydrase activity","secondary_identifiers":["EC:4.4.1.1","Reactome:R-HSA-1614614","Reactome:R-HSA-1614591","RHEA:24931"],"termid":"GO:0080146"}


id: PBO:0075309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 1","termid":"PBO:0075309"}


id: GO:1905481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in mitotic DNA replication checkpoint.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:10523629"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in mitotic DNA replication checkpoint (obsolete GO:1905481)","termid":"GO:1905481"}


id: FYECO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cerulenin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cerulenin","termid":"FYECO:0000336"}


id: PR:O13774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP cyclohydrolase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.13","secondary_identifiers":["UniProtKB:O13774"],"synonyms":[{"name":"GTP cyclohydrolase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GTP-CH-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCH1","type":"exact"}],"termid":"PR:O13774"}


id: PBO:0090218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidate cytidylyltransferase Tam41","termid":"PBO:0090218"}


id: PBO:0091731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric small non-coding RNA","termid":"PBO:0091731"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:11299204","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: FYPO:0005434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination is decreased both at recombination hotspots and elsewhere in the genome.","definition_xrefs":["PMID:12019258","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"globally decreased meiotic recombination","synonyms":[{"name":"globally reduced meiotic recombination","type":"exact"}],"termid":"FYPO:0005434"}


id: GO:0102887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-sesquiphellandrene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"beta-sesquiphellandrene synthase activity","secondary_identifiers":["RHEA:32699","MetaCyc:RXN-8430"],"termid":"GO:0102887"}


id: FYPO:0002717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion is normal (i.e. indistinguishable from wild type) during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuole fusion during vegetative growth","termid":"FYPO:0002716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuole fusion during cellular hypotonic response","synonyms":[{"name":"normal homotypic vacuole fusion during cellular hypotonic response","type":"exact"},{"name":"normal vacuole fusion during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"normal vacuole fusion during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"normal vacuole fusion during hypotonic stress","type":"exact"},{"name":"normal vacuole fusion, non-autophagic, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002717"}


id: PBO:0059424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 1","termid":"PBO:0059424"}


id: PBO:0084771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial nuclease functioning in DNA repair and replication; modulates the stability of the mitochondrial genome, induced by exposure to mutagens, also induced during meiosis at a time nearly coincident with commitment to recombination; DIN7 has a paralog, EXO1, that arose from the whole genome duplication","termid":"PBO:0084771"}


id: PBO:0049354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 12","termid":"PBO:0049354"}


id: GO:0046879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"hormone secretion","termid":"GO:0046879"}


id: PBO:0082908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulfurase involved in iron-sulfur cluster biogenesis; required for thio-modification of mitochondrial and cytoplasmic tRNAs; involved in DNA damage response by providing Fe–S cluster cofactors for DNA repair enzymes; essential protein located predominantly in mitochondria","termid":"PBO:0082908"}


id: FYPO:0005074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the anaphase-promoting complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:9264466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level in anaphase-promoting complex","synonyms":[{"name":"normal protein level in APC","type":"exact"}],"termid":"FYPO:0005074"}


id: PBO:0111464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N1-methyladenine (m1A58) demethylase","termid":"PBO:0111464"}


id: PBO:0079952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 5","termid":"PBO:0079952"}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: MOD:01375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4R)-4,5-dihydroxyleucine.","definition_xrefs":["RESID:AA0445","PubMed:6010785","ChEBI:141823","PubMed:6893271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4R)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01375"}


id: SOFP:anticodon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"anticodon coded for by a tRNA transcript feature","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","termid":"SOFP:anticodon"}


id: PR:O13907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.16","synonyms":[{"name":"ATP-citrate (pro-S-)-lyase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC22A12.16","type":"exact"},{"name":"citrate cleavage enzyme subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13907"}


id: FYPO:0007801
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115230],"is_not":false,"summary":null,"term":"FYPO:0007801"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a dividing cell at the growith end of a hypha has a septum in an abnormal location. Normally, the septum forms in the cytosol-enriched portion of the cell, displaced slightly off-center toward the portion of the cell occupied by the vacuole.","definition_xrefs":["PMID:30726171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized hyphal septum","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"abnormal hyphal septum localization","type":"related"},{"name":"abnormal hyphal septum location","type":"exact"},{"name":"abnormal hyphal septum position","type":"exact"},{"name":"abnormal hyphal septum positioning","type":"related"},{"name":"mislocalised hyphal septum","type":"exact"},{"name":"mislocalized septum during hyphal growth","type":"exact"},{"name":"mislocalized septum in hypha","type":"exact"},{"name":"mislocalized septum in hyphal growth","type":"exact"},{"name":"misplaced hyphal septum","type":"exact"}],"termid":"FYPO:0007801","terms_by_termid":{"FYPO:0007801":null}}


id: PBO:0061816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 6 Y-linked","termid":"PBO:0061816"}


id: PBO:0028786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heterochromatin_assembly_at_protein_coding_gene","termid":"PBO:0028786"}


id: PBO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 3","termid":"PBO:0052585"}


id: PBO:0081355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 180","termid":"PBO:0081355"}


id: PBO:0071333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 10","termid":"PBO:0071333"}


id: GO:0039675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus through the nuclear pore.","definition_xrefs":["PMID:12921991","VZ:1953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus through nuclear pore","synonyms":[{"name":"exit of virus from host cell nucleus through nuclear pore complex","type":"exact"},{"name":"nuclear pore exit of virus","type":"exact"},{"name":"viral enome export through nuclear pore","type":"exact"}],"termid":"GO:0039675"}


id: PBO:0079485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXN2 pseudogene 1","termid":"PBO:0079485"}


id: PBO:0064319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 1","termid":"PBO:0064319"}


id: PBO:0083520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MST27","termid":"PBO:0083520"}


id: PATO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outward.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed","synonyms":[{"name":"flared","type":"exact"}],"termid":"PATO:0001785"}


id: PBO:0034805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex ubiquitin-protein ligase E3 subunit Nse1","termid":"PBO:0034805"}


id: GO:1900664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of emodin biosynthetic process","synonyms":[{"name":"regulation of emodin anabolism","type":"exact"},{"name":"regulation of emodin biosynthesis","type":"exact"},{"name":"regulation of emodin formation","type":"exact"},{"name":"regulation of emodin synthesis","type":"exact"}],"termid":"GO:1900664"}


id: PBO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb4","termid":"PBO:0004649"}


id: PBO:0066400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 3 alpha","termid":"PBO:0066400"}


id: SO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 23S rRNA is an RNA component of the large subunit of cytosolic ribosomes in prokaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_23S_gene","termid":"SO:0002243"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_23S_rRNA","synonyms":[{"name":"cytosolic 23S LSU rRNA","type":"exact"},{"name":"cytosolic 23S rRNA","type":"exact"},{"name":"cytosolic 23S ribosomal RNA","type":"related"},{"name":"cytosolic rRNA 23S","type":"exact"}],"termid":"SO:0001001"}


id: PBO:0056794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 3","termid":"PBO:0056794"}


id: PBO:0079710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4","termid":"PBO:0079710"}


id: MOD:00308
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an L-glutamine residue to form a carboxyl-terminal L-glutamimide.","definition_xrefs":["Unimod:23#Q","PubMed:14593103","RESID:AA0303","PubMed:12771378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamimide","synonyms":[{"name":"(3S)-3-aminopiperidine-2,6-dione","type":"exact"},{"name":"2-aminopentanimide","type":"exact"},{"name":"3-amino-2,6-piperidinedione","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"L-glutamimide","type":"exact"},{"name":"alpha-aminoglutarimide","type":"exact"}],"termid":"MOD:00308"}


id: GO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-protein beta subunit.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"G-protein beta-subunit binding","synonyms":[{"name":"G-beta protein subunit binding","type":"exact"}],"termid":"GO:0031681"}


id: PATO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's lacking odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorless","termid":"PATO:0001208"}


id: PBO:0091873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pho84 repressing sense RNA Prt2","termid":"PBO:0091873"}


id: PBO:0078396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 6-1","termid":"PBO:0078396"}


id: PBO:0078013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 3","termid":"PBO:0078013"}


id: PBO:0081250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 22","termid":"PBO:0081250"}


id: PBO:0040229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 1","termid":"PBO:0040229"}


id: PBO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_deep_homology_relationship_with","termid":"PBO:0034153"}


id: PR:O94485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.04 gene.","definition_xrefs":["UniProtKB:O94485","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.04","synonyms":[{"name":"Spom972h-SPCC417.04","type":"exact"}],"termid":"PR:O94485"}


id: PBO:0057847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3159","termid":"PBO:0057847"}


id: PBO:0079814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UHRF1BP1L divergent transcript","termid":"PBO:0079814"}


id: FYPO:0004264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cAMP-dependent protein kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased cAMP-dependent protein kinase activity","synonyms":[{"name":"reduced cAMP-dependent protein kinase activity","type":"exact"}],"termid":"FYPO:0004264"}


id: PBO:0027313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_template_switch-mediated_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0027313"}


id: PBO:0057308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-1","termid":"PBO:0057308"}


id: PBO:0029313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029313"}


id: PBO:0003136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter (predicted)","termid":"PBO:0003136"}


id: PBO:0109938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, small-subunit processome Dhx37","termid":"PBO:0109938"}


id: GO:0005359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + H(out)+ = glucose(in) + H(in)+. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"low-affinity glucose:proton symporter activity","synonyms":[{"name":"low-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"low-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"low-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005359"}


id: GO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["PMID:6794030","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"pyochelin metabolic process","termid":"GO:0042863"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"pyochelin biosynthetic process","secondary_identifiers":["GO:0031187","GO:0031188"],"synonyms":[{"name":"pyochelin anabolism","type":"exact"},{"name":"pyochelin biosynthesis","type":"exact"},{"name":"pyochelin biosynthetic process, peptide formation","type":"narrow"},{"name":"pyochelin biosynthetic process, peptide modification","type":"narrow"},{"name":"pyochelin formation","type":"exact"},{"name":"pyochelin synthesis","type":"exact"}],"termid":"GO:0042864"}


id: GO:0035436
data:
  {"annotated_genes":["SJAG_01960","SJAG_00276","SJAG_04406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89278,89511,108424],"is_not":false,"summary":null,"term":"GO:0035436"}]},"cv_name":"biological_process","definition":"The process in which triose phosphate (glyceraldehyde 3-phosphate) is transported across a membrane. Glyceraldehyde 3-phosphate is any organic three carbon compound phosphate ester.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"triose phosphate transport","termid":"GO:0015717"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"triose phosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"triose phosphate membrane transport","type":"exact"}],"termid":"GO:0035436","terms_by_termid":{"GO:0035436":null}}


id: PBO:0072969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 1","termid":"PBO:0072969"}


id: PBO:0058129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4431","termid":"PBO:0058129"}


id: GO:1900356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"positively_regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methanofuran metabolic process","synonyms":[{"name":"activation of methanofuran metabolic process","type":"narrow"},{"name":"activation of methanofuran metabolism","type":"exact"},{"name":"positive regulation of methanofuran metabolism","type":"exact"},{"name":"up regulation of methanofuran metabolic process","type":"exact"},{"name":"up regulation of methanofuran metabolism","type":"exact"},{"name":"up-regulation of methanofuran metabolic process","type":"exact"},{"name":"up-regulation of methanofuran metabolism","type":"exact"},{"name":"upregulation of methanofuran metabolic process","type":"exact"},{"name":"upregulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900356"}


id: PBO:0040449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10B (putative)","termid":"PBO:0040449"}


id: PBO:0091382
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.2343703_2343704insA","termid":"PBO:0091382"}


id: GO:0032698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"negatively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-15 production","secondary_identifiers":["GO:0045373"],"synonyms":[{"name":"down regulation of interleukin-15 production","type":"exact"},{"name":"down-regulation of interleukin-15 production","type":"exact"},{"name":"downregulation of interleukin-15 production","type":"exact"},{"name":"inhibition of interleukin-15 production","type":"narrow"},{"name":"negative regulation of IL-15 production","type":"exact"},{"name":"negative regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032698"}


id: PBO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 12","termid":"PBO:0052242"}


id: PR:O13804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.07 gene.","definition_xrefs":["UniProtKB:O13804","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.07","synonyms":[{"name":"Spom972h-SPAC17H9.07","type":"exact"}],"termid":"PR:O13804"}


id: PBO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 63","termid":"PBO:0072533"}


id: GO:0021826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the telencephalon, primarily guided by interactions that do not require cell-cell contact.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph","GOC:dgh","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"}


id: GO:0045175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, basal regions of the cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"basal protein localization","synonyms":[{"name":"basal protein localisation","type":"exact"},{"name":"establishment and maintenance of basal protein localization","type":"exact"},{"name":"establishment and maintenance of protein localization in basal part of cell","type":"exact"}],"termid":"GO:0045175"}


id: FYPO:0000176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initiation of DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal DNA replication initiation","synonyms":[{"name":"abnormal DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0000176"}


id: PBO:0017774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nnf1","termid":"PBO:0017774"}


id: GO:0030790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + trichlorophenol = S-adenosyl-L-homocysteine + trichloroanisole.","definition_xrefs":["EC:2.1.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"chlorophenol O-methyltransferase activity","secondary_identifiers":["RHEA:18909","MetaCyc:2.1.1.136-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:trichlorophenol O-methyltransferase activity","type":"related"},{"name":"halogenated phenol O-methyltransferase activity","type":"broad"},{"name":"trichlorophenol O-methyltransferase activity","type":"related"}],"termid":"GO:0030790"}


id: GO:0036336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell within or between different tissues and organs of the body.","definition_xrefs":["CL:0000451","GOC:nhn","PMID:19339990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell migration","termid":"GO:0036336"}


id: PBO:0063904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Z","termid":"PBO:0063904"}


id: GO:0033625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"positively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of integrin activation","synonyms":[{"name":"positive regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033625"}


id: PBO:0080837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 1","termid":"PBO:0080837"}


id: PBO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp2","termid":"PBO:0002075"}


id: GO:0035004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol 3-phosphate. This reaction is the addition of a phosphate group to phosphatidylinositol or one of its phosphorylated derivatives at the 3' position of the inositol ring.","definition_xrefs":["PMID:9255069","GOC:bf","PMID:10209156"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity (obsolete GO:0035004)","synonyms":[{"name":"phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0035004"}


id: PR:Q9UTD8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erd1 gene.","definition_xrefs":["UniProtKB:Q9UTD8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ERD1 homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.01c","synonyms":[{"name":"Spom972h-erd1","type":"exact"}],"termid":"PR:Q9UTD8"}


id: GO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic vesicle membrane (obsolete GO:0030285)","synonyms":[{"name":"integral to synaptic vesicle membrane","type":"narrow"}],"termid":"GO:0030285"}


id: PBO:0057806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3128","termid":"PBO:0057806"}


id: PBO:0052950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1 pseudogene 1","termid":"PBO:0052950"}


id: PBO:0076050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 4","termid":"PBO:0076050"}


id: PBO:0068593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 44, pseudogene","termid":"PBO:0068593"}


id: GO:0030715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in volume of an oocyte during the growth phase of the egg chamber, once the egg chamber has left the germarium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte growth","termid":"GO:0001555"},{"relation_name":"part_of","term_name":"growth of a germarium-derived egg chamber","termid":"GO:0007295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte growth in germarium-derived egg chamber","termid":"GO:0030715"}


id: PBO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated ubiquitin-like modifier Atg12","termid":"PBO:0001409"}


id: MOD:00840
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocyanate reagent derivatized residue","termid":"MOD:00840"}


id: PBO:0058031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4252","termid":"PBO:0058031"}


id: GO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses viral RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.","definition_xrefs":["GOC:jl","VZ:1938","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"viral double stranded DNA replication via reverse transcription","synonyms":[{"name":"RNA-dependent viral DNA replication","type":"related"},{"name":"dsDNA replication via RNA intermediate","type":"exact"},{"name":"viral RNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039688"}


id: GO:0006242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCTP, deoxycytidine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009212"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCTP metabolic process","termid":"GO:0046065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dCTP biosynthetic process","synonyms":[{"name":"dCTP anabolism","type":"exact"},{"name":"dCTP biosynthesis","type":"exact"},{"name":"dCTP formation","type":"exact"},{"name":"dCTP synthesis","type":"exact"}],"termid":"GO:0006242"}


id: FYPO:0002358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0005865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002358"}


id: GO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the diameter of a blood vessel via the renin-angiotensin system.","definition_xrefs":["GOC:pr","PMID:10425188","ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"},{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"maintenance of blood vessel diameter homeostasis by renin-angiotensin","termid":"GO:0002034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"vasodilation by angiotensin involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0002033"}


id: GO:0019011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication accessory factor (obsolete GO:0019011)","synonyms":[{"name":"DNA replication accessory factor","type":"exact"}],"termid":"GO:0019011"}


id: GO:0018977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated broad spectrum contact insecticide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insecticide metabolic process","termid":"GO:0017143"},{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ddt"],"synonyms":[{"name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolism","type":"exact"},{"name":"DDT metabolic process","type":"exact"},{"name":"DDT metabolism","type":"exact"}],"termid":"GO:0018977"}


id: GO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-cysteine to form peptidyl-S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine phosphorylation","termid":"GO:0018218"}


id: GO:0048080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cuticle pigmentation","synonyms":[{"name":"down regulation of cuticle pigmentation","type":"exact"},{"name":"down-regulation of cuticle pigmentation","type":"exact"},{"name":"downregulation of cuticle pigmentation","type":"exact"},{"name":"inhibition of cuticle pigmentation","type":"narrow"}],"termid":"GO:0048080"}


id: GO:1900335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:1900333"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0006629","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from 3-(methylthio)propionic acid","synonyms":[{"name":"activation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"narrow"},{"name":"up regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"up-regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"upregulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"}],"termid":"GO:1900335"}


id: GO:0140274
data:
  {"annotated_genes":["SJAG_01224","SJAG_03048","SJAG_01805","SJAG_04140","SJAG_01837","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94796],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[98539,89986,86203,107366,112829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[112832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"},{"annotations":[112833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140273"}]},"cv_name":"biological_process","definition":"The cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01224":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"repair of kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140274","terms_by_termid":{"GO:0140273":null,"GO:0140274":null,"GO:0140429":null,"GO:1904967":null}}


id: PBO:0071193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 34","termid":"PBO:0071193"}


id: GO:0005342
data:
  {"annotated_genes":["SJAG_03899","SJAG_01960","SJAG_00543","SJAG_01924","SJAG_00275","SJAG_00276","SJAG_02011","SJAG_04295","SJAG_04706","SJAG_02779","SJAG_04588","SJAG_01505","SJAG_02140","SJAG_01406","SJAG_05325","SJAG_03503","SJAG_04593","SJAG_04725","SJAG_00671","SJAG_04984","SJAG_03400","SJAG_04637","SJAG_02029","SJAG_00232","SJAG_00626","SJAG_05175","SJAG_02780","SJAG_04718","SJAG_00522","SJAG_03644","SJAG_04905","SJAG_03256","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[92736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[70849,88239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[69936,78849,83688,78767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046943"},{"annotations":[87955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[109862,115112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[70853,88240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[103729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[88670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[96392,94397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[84639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[92205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[92206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[93536,96517,100003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[98962,106195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[94398,92738,100004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[93537,100005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[98963,106196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[106197,98964,96518,100006,93538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[94399,104071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[96509,97369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[86816,100007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[100008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[114564,91198,97817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[97818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[97819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[84640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[104453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[108426,89514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[90568,110319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[97820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[97821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[108432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic acids from one side of a membrane to the other. Organic acids are acidic compound containing carbon in covalent linkage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02011":null,"SJAG_02029":null,"SJAG_02140":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03899":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04905":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"organic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005342","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005371":null,"GO:0008517":null,"GO:0015123":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015225":null,"GO:0015233":null,"GO:0015366":null,"GO:0033229":null,"GO:0034639":null,"GO:0034658":null,"GO:0046943":null,"GO:0050833":null,"GO:0061459":null,"GO:0071913":null,"GO:0089721":null,"GO:0097434":null,"GO:1901239":null,"GO:1901604":null}}


id: PATO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that exists by virtue of being a particular point in the time of a cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phase","termid":"PATO:0000083"}


id: FYPO:0002134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0002131","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein-RNA interaction","synonyms":[{"name":"decreased RNA binding","type":"exact"},{"name":"decreased RNA-protein interaction","type":"exact"},{"name":"reduced RNA binding","type":"exact"}],"termid":"FYPO:0002134"}


id: SO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a methylation guide small nucleolar RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylation_guide_snoRNA_primary_transcript","synonyms":[{"name":"methylation guide snoRNA primary transcript","type":"exact"}],"termid":"SO:0000580"}


id: GO:0032944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mononuclear cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mononuclear cell proliferation","synonyms":[{"name":"regulation of PBMC proliferation","type":"narrow"},{"name":"regulation of peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032944"}


id: GO:0097653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the intracellular environment and the plasma membrane; it excludes any external encapsulating structures.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unencapsulated part of cell","synonyms":[{"name":"non-encapsulated part of cell","type":"exact"}],"termid":"GO:0097653"}


id: FYPO:0006253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and transfer RNA (tRNA) is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-RNA interaction","termid":"FYPO:0002357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA binding","synonyms":[{"name":"normal protein-tRNA interaction","type":"exact"},{"name":"normal protein-transfer RNA interaction","type":"exact"},{"name":"normal transfer RNA binding","type":"exact"}],"termid":"FYPO:0006253"}


id: PBO:0067391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 496, pseudogene","termid":"PBO:0067391"}


id: PBO:0057680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1269b","termid":"PBO:0057680"}


id: PBO:0048360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 71","termid":"PBO:0048360"}


id: PBO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki2","termid":"PBO:0003410"}


id: GO:0035914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle.","definition_xrefs":["GOC:vk","CL:0000188","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle cell differentiation","termid":"GO:0035914"}


id: GO:0002751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen receptor-mediated endocytosis.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation initiated by receptor mediated uptake of antigen","termid":"GO:0002745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following receptor mediated endocytosis","termid":"GO:0002751"}


id: PBO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.3","termid":"PBO:0001863"}


id: PBO:0078451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 4","termid":"PBO:0078451"}


id: PBO:0065387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 1","termid":"PBO:0065387"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: PBO:0034365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trophically_interacts_with","termid":"PBO:0034365"}


id: GO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal rod cell differentiation","termid":"GO:0060221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell fate commitment","termid":"GO:0060223"}


id: GO:0030587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sorocarp over time, from its formation to the mature structure. The process begins with the aggregation of individual cells and ends with the mature sorocarp. The sorocarp is a structure containing a spore-bearing sorus that sits on top of a stalk. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mah","ISBN:0521583640","PMID:4332228","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp development","synonyms":[{"name":"fruiting body development","type":"broad"},{"name":"fruiting body formation","type":"broad"},{"name":"sorocarp biosynthesis","type":"exact"},{"name":"sorocarp formation","type":"exact"}],"termid":"GO:0030587"}


id: PBO:0062864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 1","termid":"PBO:0062864"}


id: PBO:0070523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 22","termid":"PBO:0070523"}


id: PBO:0081385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 225","termid":"PBO:0081385"}


id: GO:0102042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-2,3,7-trideoxy-D-lyxo-hept-6-ulosonic acid + H2O + NAD = 3-dehydroquinate + ammonium + NADH + H+.","definition_xrefs":["GOC:pz","RHEA:25956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dehydroquinate synthase activity","secondary_identifiers":["MetaCyc:RXN-10032","EC:1.4.1.24"],"termid":"GO:0102042"}


id: GO:0019161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha,omega-diamine + 2-oxoglutarate = an omega-aminoaldehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"diamine transaminase activity","secondary_identifiers":["MetaCyc:DIAMTRANSAM-RXN","RHEA:18217"],"synonyms":[{"name":"amine transaminase activity","type":"related"},{"name":"amine-ketoacid transaminase activity","type":"related"},{"name":"diamine aminotransferase activity","type":"exact"},{"name":"diamine-ketoglutaric transaminase activity","type":"related"},{"name":"diamine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0019161"}


id: PBO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex negative regulatory component Yox1","termid":"PBO:0003704"}


id: PBO:0064613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 3","termid":"PBO:0064613"}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:14690602","GOC:BHF_telomere","PMID:2397458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0032200"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: PBO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim40 (predicted)","termid":"PBO:0000938"}


id: GO:0034383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle clearance","synonyms":[{"name":"LDL clearance","type":"exact"}],"termid":"GO:0034383"}


id: PBO:0001727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad2","termid":"PBO:0001727"}


id: PBO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.3","termid":"PBO:0005192"}


id: PATO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000288 relative litter size (obsolete PATO:0000288)","termid":"PATO:0000288"}


id: GO:0075317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of ascus, a sac-like structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators","GOC:di","GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascus development","termid":"GO:0075317"}


id: PBO:0086707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the multi-drug and toxin extrusion (MATE) family of the multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily","termid":"PBO:0086707"}


id: FYPO:0004014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to UV.","definition_xrefs":["PomBase:mah","PMID:7957098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to UV","synonyms":[{"name":"normal cell cycle regulation during cellular response to UV","type":"exact"},{"name":"normal cell cycle regulation during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle delay following UV exposure","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ultraviolet light","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to UV","type":"exact"}],"termid":"FYPO:0004014"}


id: PBO:0075401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17","termid":"PBO:0075401"}


id: PBO:0076299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope family member 3","termid":"PBO:0076299"}


id: GO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-aminocyclopropane-1-carboxylic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0009961"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0071213"}


id: PBO:0111768
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0111768"}


id: PBO:0085991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for selective and nonselective autophagy, and mitophagy; regulates the rate of autophagosome formation; interacts with Atg9p, and has a similar peri-mitochondrial localization; elevated Gcn4p-dependent expression under autophagy-inducing conditions; mobilized into polysomes upon a shift from a fermentable to nonfermentable carbon source; potential Cdc28p substrate; ATG41 has a paralog, ICY1, that arose from the whole genome duplication","termid":"PBO:0085991"}


id: GO:1902387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ceramide 1-phosphate.","definition_xrefs":["GOC:TermGenie","PMID:23863933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"ceramide binding","termid":"GO:0097001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ceramide 1-phosphate binding","termid":"GO:1902387"}


id: GO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component and mediating entry of the virus into the cell.","definition_xrefs":["PMID:7621403","GOC:bf","GOC:dph","UniProtKB-KW:KW-1183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"virus receptor activity","synonyms":[{"name":"viral receptor activity","type":"exact"}],"termid":"GO:0001618"}


id: GO:0120247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["GOC:krc","DOI:10.1007/978-1-4615-4913-0_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound biosynthetic process","synonyms":[{"name":"alkyne substituted compound anabolic process","type":"exact"},{"name":"alkyne substituted compound anabolism","type":"exact"},{"name":"alkyne substituted compound biosynthesis","type":"exact"},{"name":"alkyne substituted compound biosynthetic process","type":"exact"},{"name":"alkyne substituted compound synthesis","type":"exact"}],"termid":"GO:0120247"}


id: PBO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex Yth1","termid":"PBO:0000415"}


id: SO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag produced from a single sequencing read from a RACE product; typically a few hundred base pairs long.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RST","synonyms":[{"name":"RACE sequence tag","type":"exact"}],"termid":"SO:0001467"}


id: FYPO:0004865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form astral microtubules that are longer than normal during anaphase A. Anaphase A is the stage of mitosis in which the kinetochore microtubules shorten as chromosomes move toward the spindle poles.","definition_xrefs":["GO:0000091","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long astral microtubules","termid":"FYPO:0004612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"long astral microtubules during mitotic anaphase A","synonyms":[{"name":"elongated astral microtubules during mitotic anaphase A","type":"exact"},{"name":"long astral microtubules during anaphase A during mitotic cell cycle","type":"related"},{"name":"long astral microtubules during mitotic anaphase A during vegetative growth","type":"exact"},{"name":"long cytoplasmic astral microtubules during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0004865"}


id: GO:0071909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the stomach with respect to the left and right halves of the organism.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of digestive tract left/right asymmetry","termid":"GO:0071907"},{"relation_name":"part_of","term_name":"stomach development","termid":"GO:0062094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stomach left/right asymmetry","termid":"GO:0071909"}


id: PATO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tonicity which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"tonicity","termid":"PATO:0001439"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tonicity","synonyms":[{"name":"low tonicity","type":"exact"}],"termid":"PATO:0001619"}


id: PBO:0079145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 7","termid":"PBO:0079145"}


id: PBO:0066218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 23","termid":"PBO:0066218"}


id: GO:0010155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proton transport into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of proton transport","termid":"GO:0010155"}


id: SO:1001246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS with the evidence status of being independently known.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"independently_known","termid":"SO:0000906"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_independently_known","synonyms":[{"name":"CDS independently known","type":"exact"}],"termid":"SO:1001246"}


id: PBO:0078335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-7","termid":"PBO:0078335"}


id: PBO:0078399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 9-1","termid":"PBO:0078399"}


id: GO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein (obsolete GO:0003675)","synonyms":[{"name":"protein","type":"exact"}],"termid":"GO:0003675"}


id: FYPO:0004700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is bent along the long axis. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"bent cell","termid":"FYPO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"bent vegetative cell","synonyms":[{"name":"bent cell during vegetative growth","type":"exact"},{"name":"bent vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bent during vegetative growth","type":"exact"}],"termid":"FYPO:0004700"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PBO:0001442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonic dystrophy type 2","termid":"PBO:0001442"}


id: PR:Q9C106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01373","PANTHER:PTHR12949:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.03","secondary_identifiers":["UniProtKB:Q9C106"],"synonyms":[{"name":"RNA polymerase III subunit C3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C82 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3C","type":"exact"}],"termid":"PR:Q9C106"}


id: PR:Q96WV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.02","secondary_identifiers":["UniProtKB:Q96WV6"],"synonyms":[{"name":"Spom972h-MUC17","type":"exact"}],"termid":"PR:Q96WV6"}


id: GO:0032122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the oral apparatus. The oral apparatus is a funnel-like structure used by the cell to collect food and channel it to the cytostome, characteristic of ciliate protozoans.","definition_xrefs":["PMID:10503189","PMID:6414830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral apparatus organization","synonyms":[{"name":"oral apparatus morphogenesis","type":"related"},{"name":"oral apparatus organisation","type":"exact"},{"name":"oral apparatus organization and biogenesis","type":"related"},{"name":"stomatogenesis","type":"related"}],"termid":"GO:0032122"}


id: GO:0033472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-galactose, a substance composed of L-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-L-galactose metabolic process","termid":"GO:0033471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GDP-L-galactose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5115"],"synonyms":[{"name":"GDP-L-galactose anabolism","type":"exact"},{"name":"GDP-L-galactose biosynthesis","type":"exact"},{"name":"GDP-L-galactose formation","type":"exact"},{"name":"GDP-L-galactose synthesis","type":"exact"}],"termid":"GO:0033472"}


id: PBO:0078922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-1","termid":"PBO:0078922"}


id: GO:0043078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of two nuclei located centrally in a flowering plant embryo sac that eventually fuse to form the endosperm nucleus.","definition_xrefs":["ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"polar nucleus","termid":"GO:0043078"}


id: GO:0010794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"dolichol biosynthetic process","termid":"GO:0019408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of dolichol biosynthetic process","termid":"GO:0010794"}


id: GO:0018613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-fluorenone + 2 NADPH + O2 = 2 NADP+ + 3,4-dihydroxy-3,4-dihydro-9-fluorenone.","definition_xrefs":["UM-BBD_reactionID:r0409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"9-fluorenone dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018613"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_04640","SJAG_03023","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88727,101732],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[87842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225542","PMID:15225544","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: GO:0042629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase.","definition_xrefs":["PMID:12360215","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"mast cell granule","termid":"GO:0042629"}


id: PBO:0028349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_M_phase","termid":"PBO:0028349"}


id: GO:1905182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of urease activity.","definition_xrefs":["PMID:16244137","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of urease activity","termid":"GO:1905181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urease activity","synonyms":[{"name":"activation of urea amidohydrolase activity","type":"narrow"},{"name":"activation of urease activity","type":"narrow"},{"name":"positive regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urease activity","type":"exact"},{"name":"up-regulation of urea amidohydrolase activity","type":"exact"},{"name":"up-regulation of urease activity","type":"exact"},{"name":"upregulation of urea amidohydrolase activity","type":"exact"},{"name":"upregulation of urease activity","type":"exact"}],"termid":"GO:1905182"}


id: PBO:0085092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome exonuclease component; has 3'-5' exonuclease activity that is regulated by Lrp1p; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; role in sn/snoRNAs precursor degradation; forms a stable heterodimer with Lrp1p; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based","termid":"PBO:0085092"}


id: PBO:0064137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 4","termid":"PBO:0064137"}


id: PBO:0046253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 2","termid":"PBO:0046253"}


id: MOD:01895
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 3x(12)C-labeled propanoyl group.","definition_xrefs":["Unimod:58#N-term","PubMed:11999733","PubMed:11857757","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino propanoylated residue","termid":"MOD:00451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"alpha-amino 3x(12)C-labeled propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:01895"}


id: PBO:0081633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF561 antisense RNA 1 (head to head)","termid":"PBO:0081633"}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["EC:2.4.1.186","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity","secondary_identifiers":["RHEA:56560","MetaCyc:RXN-7667"],"termid":"GO:0102751"}


id: PBO:0065590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 6","termid":"PBO:0065590"}


id: GO:0009030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine phosphate = ADP + H+ + thiamine diphosphate.","definition_xrefs":["EC:2.7.4.16","RHEA:15913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"thiamine-phosphate kinase activity","secondary_identifiers":["MetaCyc:THI-P-KIN-RXN","KEGG_REACTION:R00617"],"synonyms":[{"name":"ATP:thiamine-phosphate phosphotransferase activity","type":"related"},{"name":"thiamin monophosphatase activity","type":"related"},{"name":"thiamin monophosphokinase activity","type":"related"},{"name":"thiamin phosphate kinase activity","type":"exact"},{"name":"thiamin-monophosphate kinase activity","type":"related"},{"name":"thiamin-phosphate kinase activity","type":"exact"},{"name":"thiamine-monophosphate kinase activity","type":"related"}],"termid":"GO:0009030"}


id: PBO:0059558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1B","termid":"PBO:0059558"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: GO:0019087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A virus-induced cellular transformation resulting in immortalized cells, or cells capable of indefinite replication.","definition_xrefs":["PMID:24373315","ISBN:0781702534","PMID:11119620","PMID:18366075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transformation of host cell by virus","secondary_identifiers":["GO:0020021","Wikipedia:Viral_transformation","GO:0019088"],"synonyms":[{"name":"host cell immortalization","type":"exact"},{"name":"host cell transformation","type":"exact"},{"name":"immortalization of host cell","type":"exact"},{"name":"immortalization of host cell by virus","type":"related"},{"name":"transformation of host cell","type":"exact"},{"name":"viral immortalization","type":"exact"},{"name":"viral transformation","type":"exact"},{"name":"viral transformation of host cell","type":"exact"}],"termid":"GO:0019087"}


id: GO:0033268
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon part that is a gap in the myelin where voltage-gated sodium channels cluster and saltatory conduction is executed.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"node of Ranvier","secondary_identifiers":["Wikipedia:Nodes_of_Ranvier","NIF_Subcellular:birnlex_1152_2"],"synonyms":[{"name":"node of Ranvier axon","type":"related"}],"termid":"GO:0033268"}


id: PBO:0043232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 3 pseudogene 1","termid":"PBO:0043232"}


id: GO:0034650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cortisol, the steroid hormone 11-beta-17,21-trihydroxypregn-4-ene-3,20-dione. Cortisol is synthesized from cholesterol in the adrenal gland and controls carbohydrate, fat and protein metabolism and has anti-inflammatory properties.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"cortisol metabolic process","synonyms":[{"name":"cortisol metabolism","type":"exact"}],"termid":"GO:0034650"}


id: PBO:0065386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC4 and SRSF1 interacting protein 1","termid":"PBO:0065386"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30003614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: PBO:0076668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 1 pseudogene 1","termid":"PBO:0076668"}


id: PBO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member A","termid":"PBO:0046935"}


id: GO:0007118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth at the tip of a bud, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell apical bud growth","synonyms":[{"name":"apical bud growth","type":"broad"}],"termid":"GO:0007118"}


id: PBO:0065544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 receptor","termid":"PBO:0065544"}


id: PBO:0041808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 19","termid":"PBO:0041808"}


id: PBO:0064191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 receptor 1","termid":"PBO:0064191"}


id: GO:2000180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of androgen biosynthetic process.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"negatively_regulates","term_name":"androgen biosynthetic process","termid":"GO:0006702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of androgen biosynthetic process","synonyms":[{"name":"negative regulation of androgen anabolism","type":"exact"},{"name":"negative regulation of androgen biosynthesis","type":"exact"},{"name":"negative regulation of androgen formation","type":"exact"},{"name":"negative regulation of androgen synthesis","type":"exact"}],"termid":"GO:2000180"}


id: GO:0015735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which uronic acid is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"uronic acid transmembrane transport","synonyms":[{"name":"uronic acid transport","type":"related"}],"termid":"GO:0015735"}


id: PBO:0051226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-15-1 (pseudogene)","termid":"PBO:0051226"}


id: PBO:0061204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar complex associated 4 homolog","termid":"PBO:0061204"}


id: GO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=147 symmetry. T=147 icosahedral capsid is composed of 12 pentameric and 1460 hexameric capsomeres for a total of 8820 capsid proteins.","definition_xrefs":["GOC:plm","UniProtKB-KW:KW-0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=147 icosahedral capsid","termid":"GO:0039627"}


id: GO:0019597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including benzoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate metabolic process","termid":"GO:0018874"},{"relation_name":"is_a","term_name":"mandelate catabolic process","termid":"GO:0019596"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mandelate catabolic process to benzoate","synonyms":[{"name":"(R)-mandelate breakdown to benzoate","type":"exact"},{"name":"(R)-mandelate degradation to benzoate","type":"exact"}],"termid":"GO:0019597"}


id: FYECO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes the growth of a cell population until it reaches stationary phase, i.e. a state in which cell growth division are offset by cell death, such that the cell density is stable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth to stationary phase","termid":"FYECO:0000158"}


id: PBO:0082721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cyclin genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; contains TPR repeats","termid":"PBO:0082721"}


id: PBO:0040280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 1","termid":"PBO:0040280"}


id: FYPO:0005542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which telomerase template activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0001985","FYPO:0000002","FYPO:0000653"],"is_obsolete":false,"name":"abnormal telomerase template activity","synonyms":[{"name":"abnormal telomerase RNA activity","type":"exact"},{"name":"abnormal template for synthesis of G-rich strand of telomere DNA activity","type":"exact"}],"termid":"FYPO:0005542"}


id: GO:0043931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state.","definition_xrefs":["GOC:dph","GOC:mah","GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"},{"relation_name":"part_of","term_name":"bone maturation","termid":"GO:0070977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ossification involved in bone maturation","synonyms":[{"name":"ossification involved in bone modeling","type":"narrow"},{"name":"ossification involved in skeletal development","type":"exact"}],"termid":"GO:0043931"}


id: GO:0033854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-arogenate = L-glutamate + prephenate.","definition_xrefs":["EC:2.6.1.79","RHEA:22880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate-prephenate aminotransferase activity","secondary_identifiers":["MetaCyc:PREPHENATE-TRANSAMINE-RXN","KEGG_REACTION:R07276"],"synonyms":[{"name":"L-arogenate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-glutamate:prephenate aminotransferase activity","type":"related"},{"name":"PAT","type":"related"},{"name":"prephenate transaminase activity","type":"broad"}],"termid":"GO:0033854"}


id: PBO:0063645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 2","termid":"PBO:0063645"}


id: GO:0100029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates histone modification.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by transcription from RNA polymerase II promoter (obsolete GO:0100029)","termid":"GO:0100029"}


id: PBO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 9","termid":"PBO:0043448"}


id: PATO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000424 occurence value (obsolete PATO:0000424)","termid":"PATO:0000424"}


id: GO:0048850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hypophysis are generated and organized. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"pituitary gland development","termid":"GO:0021983"},{"relation_name":"part_of","term_name":"diencephalon morphogenesis","termid":"GO:0048852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypophysis morphogenesis","synonyms":[{"name":"pituitary gland morphogenesis","type":"exact"}],"termid":"GO:0048850"}


id: CHEBI:67229
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conduritol B epoxide","termid":"CHEBI:67229"}


id: PBO:0039975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4C","termid":"PBO:0039975"}


id: PBO:0059598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 10","termid":"PBO:0059598"}


id: GO:0019542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propionate, the anion derived from propionic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"propionate biosynthetic process","synonyms":[{"name":"propionate synthesis","type":"exact"},{"name":"propionate anabolism","type":"exact"},{"name":"propionate biosynthesis","type":"exact"},{"name":"propionate formation","type":"exact"}],"termid":"GO:0019542"}


id: PBO:0082310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartyl protease secreted to periplasmic space of mating type a cell; helps cells monitor availability of mating partners; cleaves and inactivates alpha factor allowing cells to recover from alpha-factor-induced cell cycle arrest","termid":"PBO:0082310"}


id: PBO:0053167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte cell derived chemotaxin 2","termid":"PBO:0053167"}


id: PBO:0077645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 2","termid":"PBO:0077645"}


id: PBO:0056100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 5","termid":"PBO:0056100"}


id: GO:0035731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dinitrosyl-iron complex. Nitric oxide (NO) is stored as dinitrosyl-iron complexes, which form spontaneously from Glutathione (GSH), S-nitrosoglutathione, and trace amounts of ferrous ions, or by reaction of iron-sulfur centers with NO.","definition_xrefs":["GOC:BHF","PMID:10534443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cluster binding","termid":"GO:0051540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dinitrosyl-iron complex binding","synonyms":[{"name":"DNDGIC binding","type":"exact"},{"name":"DNIC binding","type":"exact"},{"name":"dinitrosyl-diglutathionyl-iron complex binding","type":"exact"}],"termid":"GO:0035731"}


id: PBO:0069994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1289, pseudogene","termid":"PBO:0069994"}


id: PBO:0054077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1427","termid":"PBO:0054077"}


id: PBO:0071624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 43","termid":"PBO:0071624"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: PBO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0044557"}


id: PBO:0053060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LASP1 neighbor","termid":"PBO:0053060"}


id: GO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid and dependent on the coupling of the alpha subunit of G proteins to the hormone receptors.","definition_xrefs":["GOC:pj","PMID:11027362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway, G-alpha-dependent","synonyms":[{"name":"gibberellic acid mediated signalling, G-alpha-dependent","type":"exact"}],"termid":"GO:0042388"}


id: PBO:0053886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1166","termid":"PBO:0053886"}


id: GO:1903612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-dependent ATPase activity.","definition_xrefs":["PMID:10861851","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent ATPase activity","termid":"GO:1903610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-dependent ATPase activity","synonyms":[{"name":"activation of calcium-dependent ATPase activity","type":"narrow"},{"name":"up regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"up-regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"upregulation of calcium-dependent ATPase activity","type":"exact"}],"termid":"GO:1903612"}


id: PBO:0081623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 552","termid":"PBO:0081623"}


id: PBO:0063074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase alpha","termid":"PBO:0063074"}


id: PBO:0027930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027930"}


id: PBO:0054967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2381","termid":"PBO:0054967"}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: MOD:00991
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(sn-1-glyceryl)-L-cysteine","termid":"MOD:00991"}


id: PBO:0051881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISY1-RAB43 readthrough","termid":"PBO:0051881"}


id: GO:0006149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyinosine, hypoxanthine deoxyriboside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyinosine metabolic process","termid":"GO:0046094"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyinosine catabolic process","synonyms":[{"name":"deoxyinosine breakdown","type":"exact"},{"name":"deoxyinosine catabolism","type":"exact"},{"name":"deoxyinosine degradation","type":"exact"}],"termid":"GO:0006149"}


id: PBO:0056950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-2","termid":"PBO:0056950"}


id: PBO:0036379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofusin, mitochondrial dynamin family fusion GTPase protein (predicted)","termid":"PBO:0036379"}


id: PBO:0053891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1173","termid":"PBO:0053891"}


id: GO:0032481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"positively_regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type I interferon production","synonyms":[{"name":"activation of type I interferon production","type":"narrow"},{"name":"positive regulation of type I IFN production","type":"exact"},{"name":"stimulation of type I interferon production","type":"narrow"},{"name":"up regulation of type I interferon production","type":"exact"},{"name":"up-regulation of type I interferon production","type":"exact"},{"name":"upregulation of type I interferon production","type":"exact"}],"termid":"GO:0032481"}


id: PBO:0028322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitochondrion","termid":"PBO:0028322"}


id: PBO:0080902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 2","termid":"PBO:0080902"}


id: PBO:0085167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated covalently-bound cell wall protein; required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway; coding sequence contains length polymorphisms in different strains; PIR3 has a paralog, HSP150, that arose from the whole genome duplication","termid":"PBO:0085167"}


id: PBO:0074477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMUG1 antisense RNA 1","termid":"PBO:0074477"}


id: GO:2000586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000586"}


id: GO:0022828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of a solute by a channel that opens in response to phosphorylation of one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation-gated channel activity (obsolete GO:0022828)","termid":"GO:0022828"}


id: GO:1901812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-carotene.","definition_xrefs":["MetaCyc:PWY-5943","PMID:11387982","GOC:TermGenie","GOC:yaf","UniPathway:UPA00802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene biosynthetic process","synonyms":[{"name":"beta-carotene anabolism","type":"exact"},{"name":"beta-carotene biosynthesis","type":"exact"},{"name":"beta-carotene formation","type":"exact"},{"name":"beta-carotene synthesis","type":"exact"}],"termid":"GO:1901812"}


id: GO:0016034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-maleylacetoacetate = 4-fumarylacetoacetate.","definition_xrefs":["EC:5.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"maleylacetoacetate isomerase activity","secondary_identifiers":["Reactome:R-HSA-71173","GO:0018841","MetaCyc:MALEYLACETOACETATE-ISOMERASE-RXN","UM-BBD_reactionID:r0106","RHEA:14817"],"synonyms":[{"name":"4-maleylacetoacetate cis-trans-isomerase activity","type":"related"},{"name":"maleylacetoacetic isomerase activity","type":"related"},{"name":"maleylacetone cis-trans-isomerase activity","type":"related"},{"name":"maleylacetone isomerase activity","type":"related"}],"termid":"GO:0016034"}


id: PR:O14027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snz1 gene.","definition_xrefs":["UniProtKB:O14027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.04","synonyms":[{"name":"PLP synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snz1","type":"exact"}],"termid":"PR:O14027"}


id: PBO:0049577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone A","termid":"PBO:0049577"}


id: PBO:0062665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily G member 1","termid":"PBO:0062665"}


id: PBO:0029855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_outer_repeat","termid":"PBO:0029855"}


id: GO:0009843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid found in a cyanelle, which is a type of plastid found in certain algae. The cyanelle contains a photosynthetic membrane resembling that of cyanobacteria.","definition_xrefs":["GOC:lr","GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid","termid":"GO:0031976"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle thylakoid","termid":"GO:0009843"}


id: GO:1903533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"protein targeting","termid":"GO:0006605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting","synonyms":[{"name":"regulation of nascent polypeptide association","type":"related"},{"name":"regulation of protein sorting along secretory pathway","type":"narrow"}],"termid":"GO:1903533"}


id: PBO:0078691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-4","termid":"PBO:0078691"}


id: SO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 18S rRNA is an RNA component of the small subunit of cytosolic ribosomes in eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_18S_gene","termid":"SO:0002236"},{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA","termid":"SO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_18S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/18S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 18S rRNA","type":"exact"},{"name":"cytosolic 18S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 18S","type":"exact"}],"termid":"SO:0000407"}


id: GO:1904671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of cell differentiation that is involved in stem cell population maintenance.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","PMID:19409607","GO_REF:0000060","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in stem cell population maintenance","synonyms":[{"name":"down regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"down-regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down-regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"downregulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"downregulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"inhibition of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"inhibition of cell differentiation involved in stem cell population maintenance","type":"narrow"},{"name":"negative regulation of cell differentiation involved in maintenance of pluripotency","type":"related"}],"termid":"GO:1904671"}


id: PATO:0000628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue the bearer's being changed in abnormal position.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced","termid":"PATO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised","secondary_identifiers":["PATO:0000621"],"synonyms":[{"name":"ectopic","type":"exact"},{"name":"mislocalized","type":"exact"}],"termid":"PATO:0000628"}


id: PBO:0045796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDIL3 divergent transcript","termid":"PBO:0045796"}


id: GO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of telomerase activity","termid":"GO:0051972"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomerase activity","synonyms":[{"name":"down regulation of telomerase activity","type":"exact"},{"name":"down-regulation of telomerase activity","type":"exact"},{"name":"downregulation of telomerase activity","type":"exact"},{"name":"inhibition of telomerase activity","type":"narrow"},{"name":"telomerase inhibitor","type":"related"}],"termid":"GO:0051974"}


id: GO:0035517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.","definition_xrefs":["PMID:20436459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PcG protein complex","termid":"GO:0031519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"PR-DUB complex","synonyms":[{"name":"Polycomb repressive deubiquitinase complex","type":"exact"}],"termid":"GO:0035517"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: GO:0052420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont xylan (obsolete GO:0052420)","termid":"GO:0052420"}


id: GO:0051090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA-binding transcription factor activity","secondary_identifiers":["GO:2000823","GO:1904167"],"synonyms":[{"name":"regulation of DNA binding transcription factor activity","type":"exact"},{"name":"regulation of androgen receptor activity","type":"narrow"},{"name":"regulation of sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"regulation of thyroid hormone receptor activity","type":"narrow"},{"name":"regulation of transcription factor activity","type":"broad"}],"termid":"GO:0051090"}


id: PBO:0040700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 1","termid":"PBO:0040700"}


id: PR:P23566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.07c","secondary_identifiers":["UniProtKB:P23566"],"synonyms":[{"name":"RAD6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC18B11.07c","type":"related"},{"name":"Spom972h-UBE2B","type":"exact"},{"name":"ubc2","type":"related"},{"name":"ubiquitin carrier protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23566"}


id: GO:0010527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of RNA-mediated transposition. RNA-mediated transposition is a type of transpositional recombination which occurs via an RNA intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition, RNA-mediated (obsolete GO:0010527)","termid":"GO:0010527"}


id: GO:0019831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromate sensitivity/resistance (obsolete GO:0019831)","synonyms":[{"name":"chromate sensitivity/resistance","type":"exact"}],"termid":"GO:0019831"}


id: PBO:0076172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 3","termid":"PBO:0076172"}


id: FYPO:0005392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA recombination frequency during cellular response to ionizing radiation","synonyms":[{"name":"normal DNA recombination frequency during cellular response to IR","type":"exact"},{"name":"normal DNA recombination frequency during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005392"}


id: GO:0006853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of acyl groups to and from acyl-CoA molecules to form O-acylcarnitine, which can exchange across the mitochondrial inner membrane with unacylated carnitine.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"},{"relation_name":"is_a","term_name":"fatty acid transmembrane transport","termid":"GO:1902001"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"carnitine shuttle","secondary_identifiers":["Wikipedia:Carnitine#Role_in_fatty_acid_metabolism"],"termid":"GO:0006853"}


id: PBO:0003806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex) (predicted)","termid":"PBO:0003806"}


id: PBO:0038667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 3","termid":"PBO:0038667"}


id: PBO:0069806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1092, pseudogene","termid":"PBO:0069806"}


id: PBO:0076699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1 pseudogene 1","termid":"PBO:0076699"}


id: PBO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 3","termid":"PBO:0043028"}


id: PBO:0079435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 3","termid":"PBO:0079435"}


id: GO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of asymmetry from the dorsal to the ventral side; as, the dorsoventral axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of bilateral symmetry","termid":"GO:0009855"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of dorsal/ventral asymmetry","synonyms":[{"name":"determination of adaxial/abaxial asymmetry","type":"related"},{"name":"determination of dorsal-ventral asymmetry","type":"exact"},{"name":"determination of dorsoventral asymmetry","type":"exact"}],"termid":"GO:0048262"}


id: GO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoate + H2O = 4-hydroxybenzoate + chloride + H+.","definition_xrefs":["EC:3.8.1.6","RHEA:23440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"4-chlorobenzoate dehalogenase activity","secondary_identifiers":["KEGG_REACTION:R01307","MetaCyc:4-CHLOROBENZOATE-DEHALOGENASE-RXN"],"synonyms":[{"name":"4-chlorobenzoate chlorohydrolase activity","type":"related"},{"name":"halobenzoate dehalogenase activity","type":"related"}],"termid":"GO:0047576"}


id: GO:0047181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoyl-CoA + 3 malonyl-CoA = 3 CO2 + 2,3',4,6-tetrahydroxybenzophenone + 4 coenzyme A.","definition_xrefs":["MetaCyc:2.3.1.151-RXN","EC:2.3.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tetrahydroxybenzophenone synthase activity","secondary_identifiers":["RHEA:19305"],"synonyms":[{"name":"malonyl-CoA:3-hydroxybenzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0047181"}


id: PBO:0017854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Abc3, unknown specificity","termid":"PBO:0017854"}


id: GO:0098761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-7","termid":"GO:0098760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-7","synonyms":[{"name":"cellular response to IL-7","type":"exact"}],"termid":"GO:0098761"}


id: GO:0097053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"L-kynurenine metabolic process","termid":"GO:0097052"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-kynurenine catabolic process","synonyms":[{"name":"L-kynurenine breakdown","type":"exact"},{"name":"L-kynurenine catabolism","type":"exact"},{"name":"L-kynurenine degradation","type":"exact"}],"termid":"GO:0097053"}


