# terms

id: GO:0051992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine + di-trans,poly-cis-undecaprenyl phosphate = UMP + N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol.","definition_xrefs":["EC:2.7.8.13","MetaCyc:PHOSNACMURPENTATRANS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity","secondary_identifiers":["RHEA:28386"],"termid":"GO:0051992"}


id: PBO:0075937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 2","termid":"PBO:0075937"}


id: PBO:0068483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 64, pseudogene","termid":"PBO:0068483"}


id: PBO:0055612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3051","termid":"PBO:0055612"}


id: GO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the metanephros progresses from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in metanephros development (obsolete GO:0072212)","termid":"GO:0072212"}


id: MOD:00487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:115#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxProBiotin","type":"related"},{"name":"Oxidized Proline biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00487"}


id: GO:0102545
data:
  {"annotated_genes":["SJAG_04110","SJAG_02091","SJAG_03204","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86324,88057,88066,96970,99139,110908,113120],"is_not":false,"summary":null,"term":"GO:0102545"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + a phosphatidylcholine = sn-glycero-3-phosphocholine + 2 H+ + 2 a carboxylate.","definition_xrefs":["MetaCyc:RXN-14899","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidyl phospholipase B activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0102545","terms_by_termid":{"GO:0102545":null}}


id: GO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells.","definition_xrefs":["GOC:dph","PMID:21508411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell homeostasis","termid":"GO:0061484"}


id: PBO:0030120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030120"}


id: PBO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-16","termid":"PBO:0051434"}


id: PATO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yeast mating type","termid":"PATO:0001337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}


id: PBO:0050169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 25","termid":"PBO:0050169"}


id: PBO:0075254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 7","termid":"PBO:0075254"}


id: GO:0036218
data:
  {"annotated_genes":["SJAG_01651"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93279],"is_not":false,"summary":null,"term":"GO:0036218"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + H2O = dTMP + H+ + diphosphate.","definition_xrefs":["GOC:dgf","RHEA:28534","PMID:22531138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0047429","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dTTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-5107"],"synonyms":[{"name":"dTTP pyrophosphatase activity","type":"exact"}],"termid":"GO:0036218","terms_by_termid":{"GO:0036218":null}}


id: GO:0047936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H.","definition_xrefs":["EC:1.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glucose 1-dehydrogenase [NAD(P)] activity","secondary_identifiers":["MetaCyc:GLUCOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-glucose dehydrogenase (NAD(P))","type":"related"},{"name":"beta-D-glucose:NAD(P)+ 1-oxidoreductase activity","type":"related"},{"name":"hexose phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0047936"}


id: GO:0071946
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98430],"is_not":false,"summary":null,"term":"GO:0071946"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that is initiated by protein binding to a binding site on the same chromosome, but remote from the termination site, via DNA looping or chromosome kissing.","definition_xrefs":["PMID:20850009","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific DNA replication termination","termid":"GO:0071170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"cis-acting DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cis acting DNA replication termination","type":"exact"}],"termid":"GO:0071946","terms_by_termid":{"GO:0071946":null}}


id: GO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"is_a","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by hormone","synonyms":[{"name":"blood pressure regulation by hormone","type":"exact"},{"name":"hormonal control of blood pressure","type":"related"},{"name":"hormonal regulation of blood pressure","type":"exact"}],"termid":"GO:0001990"}


id: GO:0050163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxaloacetate = <stereo>enol</stereo>-oxaloacetate.","definition_xrefs":["EC:5.3.2.2","RHEA:16021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"oxaloacetate tautomerase activity","secondary_identifiers":["MetaCyc:OXALOACETATE-TAUTOMERASE-RXN","KEGG_REACTION:R00363"],"synonyms":[{"name":"oxalacetic keto-enol isomerase activity","type":"related"},{"name":"oxaloacetate keto-enol tautomerase activity","type":"related"},{"name":"oxaloacetate keto-enol-isomerase activity","type":"related"}],"termid":"GO:0050163"}


id: GO:0055105
data:
  {"annotated_genes":["SJAG_01515","SJAG_02485","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110783],"is_not":false,"summary":null,"term":"GO:0055105"},{"annotations":[111700,94861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ubiquitin-protein transferase.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ubiquitin-protein transferase regulator activity","termid":"GO:0055106"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01515":null,"SJAG_02485":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-protein transferase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055105","terms_by_termid":{"GO:0055105":null,"GO:1990948":null}}


id: PBO:0041130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 10","termid":"PBO:0041130"}


id: GO:0097614
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a dinoflagellate cell below the cingulum; also referred to as the posterior portion of a dinoflagellate cell. It is separated from the epicone by the cingulum.","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate#Morphology","ISBN:0632009152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate hypocone","synonyms":[{"name":"hypocone","type":"broad"},{"name":"hyposome","type":"related"},{"name":"hypotheca","type":"related"}],"termid":"GO:0097614"}


id: PBO:0068360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 141","termid":"PBO:0068360"}


id: _global:assayed_using
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and an entity, such as a gene product that acts as an enzyme or substrate, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_using","termid":"_global:assayed_using"}


id: PBO:0078479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 3-1","termid":"PBO:0078479"}


id: PBO:0053686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 879","termid":"PBO:0053686"}


id: FYPO:0002428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores with elongated germ tubes and vegetative cells of normal size and shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with elongated germ tubes and cells with normal morphology (obsolete FYPO:0002428)","termid":"FYPO:0002428"}


id: GO:0070427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 1 (NOD1) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:17944960","PMID:18585455","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"NOD1 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070427"}


id: PBO:0005287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-GATA type (predicted)","termid":"PBO:0005287"}


id: PBO:0028396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_27S_rRNA_precursor_level","termid":"PBO:0028396"}


id: PBO:0064217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB2 antisense RNA 1","termid":"PBO:0064217"}


id: PBO:0047754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focadhesin","termid":"PBO:0047754"}


id: GO:1990274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any disaggregation of an actomyosin contractile ring into its constituent components that is involved in a mitotic cell cycle.","definition_xrefs":["PMID:22891673","PMID:14602073"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic actomyosin contractile ring disassembly (obsolete GO:1990274)","termid":"GO:1990274"}


id: GO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of immunoglobulin production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of immunoglobulin production","secondary_identifiers":["GO:0002640","GO:0051023"],"synonyms":[{"name":"regulation of antibody production","type":"exact"},{"name":"regulation of immunoglobulin biosynthetic process","type":"narrow"},{"name":"regulation of immunoglobulin secretion","type":"narrow"}],"termid":"GO:0002637"}


id: GO:0005222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly cAMP-activated cation channel activity","synonyms":[{"name":"HCN channel activity","type":"broad"},{"name":"hyperpolarization-activated cyclic nucleotide-gated channel activity","type":"broad"},{"name":"intracellular 3',5' cAMP activated cation channel activity","type":"exact"},{"name":"intracellular 3',5'-cAMP activated cation channel activity","type":"exact"},{"name":"intracellular adenosine 3',5'-cyclophosphate activated cation channel activity","type":"exact"},{"name":"intracellular cAMP activated cation channel activity","type":"exact"},{"name":"intracellular cAMP-activated cation channel activity","type":"exact"},{"name":"intracellular cyclic AMP activated cation channel activity","type":"exact"}],"termid":"GO:0005222"}


id: GO:1902973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication DNA ligation","termid":"GO:1902333"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in mitotic DNA replication","type":"exact"},{"name":"DNA ligation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902973"}


id: GO:0097600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A xylanase activity that acts on one of the ends of a xylan polymer which does not contain side chains.","definition_xrefs":["GOC:jh2","PMID:16535010","ISBN:81-7736-269-0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"exoxylanase activity","termid":"GO:0097600"}


id: PBO:0039292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG8 alpha-1,3-glucosyltransferase","termid":"PBO:0039292"}


id: PBO:0075091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 141A","termid":"PBO:0075091"}


id: FYPO:0002070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal nucleus positioning","termid":"FYPO:0001389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleus location","synonyms":[{"name":"normal nuclear location","type":"exact"},{"name":"normal nucleus location during mitotic cell cycle","type":"related"},{"name":"normal nucleus location during vegetative growth","type":"exact"},{"name":"normal nucleus position","type":"exact"},{"name":"normally localized nucleus","type":"exact"}],"termid":"FYPO:0002070"}


id: PBO:0062994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 3","termid":"PBO:0062994"}


id: PR:000027572
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:11242054","PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.2","termid":"PR:000027571"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"SPBC8D2.04, PI060","type":"related"},{"name":"Spom-hht2","type":"exact"}],"termid":"PR:000027572"}


id: GO:1904806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oxidation.","definition_xrefs":["PMID:22719267","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein oxidation","synonyms":[{"name":"regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904806"}


id: GO:0098838
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904947"}]},"cv_name":"biological_process","definition":"The process in which a folic acid, or one of its derivatives (dihydrofolate, tetrahydrofolate, methylene-tetrahydrofolate or methyl-tetrahydrofolate) is transported across a membrane.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transport","termid":"GO:0015884"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"folate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"folic acid transmembrane transport","type":"related"},{"name":"reduced folate transmembrane transport","type":"narrow"}],"termid":"GO:0098838","terms_by_termid":{"GO:1904947":null}}


id: PBO:0036410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1 (predicted)","termid":"PBO:0036410"}


id: FYPO:0001490
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated inviable cell during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell","type":"exact"},{"name":"inviable elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell","type":"exact"}],"termid":"FYPO:0001490","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_04790","SJAG_00158","SJAG_02068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99517,100155,111225],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a steryl ester + H2O = a sterol + a fatty acid.","definition_xrefs":["EC:3.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"sterol esterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8865667","Reactome:R-HSA-6813720","Reactome:R-HSA-192417","MetaCyc:STEROL-ESTERASE-RXN","RHEA:10100"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: PBO:0065851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 2","termid":"PBO:0065851"}


id: PBO:0035861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton","termid":"PBO:0035861"}


id: PBO:0032714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis","termid":"PBO:0032714"}


id: PBO:0084653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; appears to have distinct and also overlapping functions with Tpm1p; TPM2 has a paralog, TPM1, that arose from the whole genome duplication","termid":"PBO:0084653"}


id: GO:0017053
data:
  {"annotated_genes":["SJAG_00861","SJAG_03095","SJAG_00958","SJAG_00290","SJAG_04921"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103156,95044,87433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160051"},{"annotations":[104661,86860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017054"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses activity that prevents or downregulates transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00290":null,"SJAG_00861":null,"SJAG_00958":null,"SJAG_03095":null,"SJAG_04921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription repressor complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090569","GO:0090568"],"synonyms":[{"name":"cytoplasmic transcriptional repressor complex","type":"related"},{"name":"nuclear transcriptional repressor complex","type":"related"},{"name":"transcription factor inhibitor complex","type":"exact"},{"name":"transcriptional repressor complex","type":"exact"}],"termid":"GO:0017053","terms_by_termid":{"GO:0017054":null,"GO:0160051":null}}


id: PBO:0047635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four-jointed box kinase 1","termid":"PBO:0047635"}


id: PBO:0079747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UCHL1 divergent transcript","termid":"PBO:0079747"}


id: GO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell signaling","synonyms":[{"name":"Purkinje myocyte to ventricular cardiac muscle cell signalling","type":"exact"}],"termid":"GO:0086029"}


id: PBO:0091858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1","termid":"PBO:0091858"}


id: PBO:0084418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major CTP synthase isozyme (see also URA8); catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA7 has a paralog, URA8, that arose from the whole genome duplication","termid":"PBO:0084418"}


id: PBO:0047557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 2","termid":"PBO:0047557"}


id: PBO:0082542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein of unknown function; localizes to the cytoplasm; deletion improves xylose fermentation in industrially engineered strains; YLR042C is not an essential gene","termid":"PBO:0082542"}


id: GO:0016807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"cysteine-type carboxypeptidase activity","secondary_identifiers":["EC:3.4.18.-","MetaCyc:3.4.18.1-RXN"],"termid":"GO:0016807"}


id: PBO:0051741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 8","termid":"PBO:0051741"}


id: PBO:0089564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S17","termid":"PBO:0089564"}


id: PBO:0073826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5","termid":"PBO:0073826"}


id: PBO:0076449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 5","termid":"PBO:0076449"}


id: GO:0070588
data:
  {"annotated_genes":["SJAG_01400","SJAG_04757","SJAG_02440","SJAG_03631","SJAG_05229","SJAG_02019","SJAG_03873","SJAG_02877","SJAG_00296","SJAG_04096","SJAG_04028","SJAG_03850","SJAG_02532","SJAG_04551","SJAG_03399","SJAG_01090","SJAG_04698","SJAG_03895","SJAG_04668","SJAG_00321","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86894,90988,91631,91861,92160,94497,97786,104831,105543,110090],"is_not":false,"summary":null,"term":"GO:0070588"},{"annotations":[91812,93529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[95782,110592,88526,88580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[87380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[87398,109530],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[98304],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[89559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00321":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion membrane transport","type":"exact"},{"name":"transmembrane calcium transport","type":"exact"}],"termid":"GO:0070588","terms_by_termid":{"GO:0036444":null,"GO:0051209":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: FYPO:0001425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in complete rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete re-replication","type":"exact"},{"name":"complete mitotic DNA re-replication","type":"related"},{"name":"complete mitotic DNA rereplication","type":"related"},{"name":"endoreduplication","type":"related"},{"name":"endoreplication","type":"related"},{"name":"increased spontaneous diploidization","type":"related"}],"termid":"FYPO:0001425"}


id: PBO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional enzyme","termid":"PBO:0001054"}


id: PBO:0005516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B alpha subunit (predicted)","termid":"PBO:0005516"}


id: PR:000028943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase reduced form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA/Red+","pombase_gene_id":"SPAC29E6.05c","synonyms":[{"name":"MSRA/Red+","type":"exact"},{"name":"Spom-MSRA/Red+","type":"exact"}],"termid":"PR:000028943"}


id: GO:0039017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the pronephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in pronephros development","synonyms":[{"name":"pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039017"}


id: FYPO:0004710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed when the cell undergoes transition from G0 phase to G1 in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:19197239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci","termid":"FYPO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci during G0 to G1 transition","synonyms":[{"name":"increased number of Rad22 foci during G0 to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during cell cycle re-entry","type":"exact"},{"name":"increased number of Rad52 foci during cell quiescence to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during exit from cell quiescence","type":"exact"},{"name":"increased number of Rad52 foci during quiescence to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during recovery from quiescence","type":"exact"}],"termid":"FYPO:0004710"}


id: FYPO:0006759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome organization is abnormal during the meiotic cell cycle.","definition_xrefs":["GO:0070192","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic chromosome organization","synonyms":[{"name":"abnormal chromosome organization during meiotic cell cycle","type":"exact"},{"name":"abnormal chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal meiotic chromosome organisation","type":"exact"}],"termid":"FYPO:0006759"}


id: PBO:0031342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydroxyurea","termid":"PBO:0031342"}


id: PBO:0034636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_kinetochore_during_vegetative_growth","termid":"PBO:0034636"}


id: SO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A unprocessed pseudogene supported by locus-specific evidence of transcription.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_unprocessed_pseudogene","synonyms":[{"name":"transcribed unprocessed pseudogene","type":"exact"},{"name":"transcribed_non_processed_pseudogene","type":"exact"}],"termid":"SO:0002107"}


id: MOD:00230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, two L-histidine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["PubMed:2765515","PubMed:9651245","RESID:AA0225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); via pros nitrogen","type":"exact"},{"name":"Rieske iron-sulfur cofactor","type":"exact"},{"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(bis-N3'-histidinoiron)","type":"exact"}],"termid":"MOD:00230"}


id: FYPO:0008122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion fusion is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fusion","termid":"FYPO:0008089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased mitochondrial fusion","termid":"FYPO:0008122"}


id: PBO:0053462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 423","termid":"PBO:0053462"}


id: GO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host gene expression","synonyms":[{"name":"host gene expression shutoff","type":"exact"},{"name":"host gene expression shutoff by virus","type":"narrow"},{"name":"suppression by virus of host gene expression","type":"narrow"}],"termid":"GO:0039657"}


id: PBO:0053268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A2","termid":"PBO:0053268"}


id: PBO:0088691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family Noc4","termid":"PBO:0088691"}


id: PBO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 37","termid":"PBO:0071899"}


id: GO:0141029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts focal adhesion in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24573681","PMID:19489119","PMID:24905543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host focal adhesion","synonyms":[{"name":"disruption by symbiont of host focal adhesion","type":"exact"}],"termid":"GO:0141029"}


id: PBO:0055910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 1","termid":"PBO:0055910"}


id: GO:0141046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of an Atg8 family modifer from one protein to a phosphatidylethanolamine or phosphatidylserine on a membrane, via the reaction X-Atg8 + Y = Y-Atg8 + X.","definition_xrefs":["PMID:11100732","PMID:28234446","PMID:18704115","PMID:17986448","PMID:33909989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019787","GO:0003674","GO:0003824","GO:0016740","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"Atg8-family conjugating enzyme activity","synonyms":[{"name":"APG8 conjugating enzyme activity","type":"exact"},{"name":"Atg8 conjugating enzyme activity","type":"narrow"},{"name":"Atg8-like conjugating activity","type":"exact"},{"name":"E2","type":"broad"}],"termid":"GO:0141046"}


id: PBO:0045241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 9","termid":"PBO:0045241"}


id: GO:1990188
data:
  {"annotated_genes":["SJAG_03689","SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101536,112143],"is_not":false,"summary":null,"term":"GO:1990188"}]},"cv_name":"molecular_function","definition":"Binding to euchromatin, a dispersed and relatively uncompacted form of chromatin.","definition_xrefs":["PMID:22431512","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"euchromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990188","terms_by_termid":{"GO:1990188":null}}


id: PBO:0029439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation","termid":"PBO:0029439"}


id: PBO:0108541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 6, pseudogene","termid":"PBO:0108541"}


id: GO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of animal organ formation. Organ formation is the process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment.","definition_xrefs":["GOC:dph","GOC:mtg_heart","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of animal organ formation","termid":"GO:0003156"}


id: PBO:0005200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12 small nucleolar RNA/small nucleolar RNA snR99","termid":"PBO:0005200"}


id: PBO:0058701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6829","termid":"PBO:0058701"}


id: PBO:0038746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4 pseudogene 1","termid":"PBO:0038746"}


id: GO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antifungal peptide production","termid":"GO:0002788"}


id: PBO:0046711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eva-1 homolog A, regulator of programmed cell death","termid":"PBO:0046711"}


id: PBO:0043089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 1","termid":"PBO:0043089"}


id: GO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA structure formed by the minor groove of adenine-thymine-rich DNA regions. Examples of proteins having this function are AT-rich interaction domain (ARID)-containing proteins.","definition_xrefs":["PMID:2670564","PMID:26223912","GOC:jl","PMID:10545119","PMID:15802641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"minor groove of adenine-thymine-rich DNA binding","synonyms":[{"name":"AT DNA binding","type":"exact"},{"name":"AT binding","type":"exact"},{"name":"AT-rich DNA binding","type":"exact"}],"termid":"GO:0003680"}


id: PBO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHromodomain Protein","termid":"PBO:0001419"}


id: PBO:0065785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiescin sulfhydryl oxidase 1","termid":"PBO:0065785"}


id: GO:1902621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of an actomyosin contractile ring into its constituent components.","definition_xrefs":["PMID:14602073","PMID:22891673"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin contractile ring disassembly (obsolete GO:1902621)","termid":"GO:1902621"}


id: FYPO:0003791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"},{"relation_name":"is_a","term_name":"abnormal meiotic recombination at silent mating-type cassette","termid":"FYPO:0003346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased meiotic recombination at silent mating-type cassette","synonyms":[{"name":"increased meiotic recombination at mating-type region heterochromatin","type":"exact"}],"termid":"FYPO:0003791"}


id: PBO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh2 (predicted)","termid":"PBO:0000171"}


id: PBO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe PNuts","termid":"PBO:0018195"}


id: GO:0018459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,5R)-carveol + NADP+ = (R)-carvone + H+ + NADPH.","definition_xrefs":["RHEA:13629","EC:1.1.1.243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carveol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03114","MetaCyc:CARVEOL-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0714"],"synonyms":[{"name":"(-)-trans-carveol dehydrogenase activity","type":"related"},{"name":"(-)-trans-carveol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018459"}


id: PATO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal to","synonyms":[{"name":"distal","type":"exact"}],"termid":"PATO:0001234"}


id: PBO:0085763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; binds phosphatidylinositols and cardiolipin in a large-scale study","termid":"PBO:0085763"}


id: GO:0050884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism voluntarily modulates its posture, the alignment of its anatomical parts.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling posture","synonyms":[{"name":"regulation of posture","type":"exact"}],"termid":"GO:0050884"}


id: GO:0005111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 fibroblast growth factor receptor (FGFR2).","definition_xrefs":["GOC:fb_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR2 binding","type":"exact"},{"name":"FGFR2 ligand","type":"narrow"},{"name":"heartless binding","type":"exact"},{"name":"heartless ligand","type":"narrow"},{"name":"type 2 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005111"}


id: GO:0021955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"central nervous system neuron development","termid":"GO:0021954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system neuron axonogenesis","termid":"GO:0021955"}


id: GO:0015813
data:
  {"annotated_genes":["SJAG_03256","SJAG_00522","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92732],"is_not":false,"summary":null,"term":"GO:0015813"},{"annotations":[94395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-glutamate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089711"],"synonyms":[{"name":"L-glutamate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015813","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null}}


id: PBO:0013773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg101","termid":"PBO:0013773"}


id: GO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + plastoquinone = NAD+ + plastoquinol.","definition_xrefs":["GOC:mah","EC:1.6.99.6"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH dehydrogenase (plastoquinone) activity (obsolete GO:0031679)","synonyms":[{"name":"NADH:plastoquinone reductase activity","type":"exact"}],"termid":"GO:0031679"}


id: PBO:0028180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cysteine_synthase_activity","termid":"PBO:0028180"}


id: GO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excessive phosphorylation of a protein, as a result of activation of kinases, deactivation of phosphatases, or both.","definition_xrefs":["PMID:12859672","GOC:jid","ISBN:039751820X"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperphosphorylation (obsolete GO:0048151)","synonyms":[{"name":"hyperphosphorylation","type":"exact"}],"termid":"GO:0048151"}


id: PBO:0078594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 7, Y-linked","termid":"PBO:0078594"}


id: GO:0044397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of actin cortical patch localization in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cortical patch internalization (obsolete GO:0044397)","termid":"GO:0044397"}


id: PBO:0064930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 3","termid":"PBO:0064930"}


id: MOD:00499
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:3311742","PubMed:3578767","Unimod:128#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-iodoacetamidofluorescein","synonyms":[{"name":"5-Iodoacetamidofluorescein (Molecular Probe, Eugene, OR)","type":"related"},{"name":"Fluorescein","type":"related"}],"termid":"MOD:00499"}


id: PBO:0073031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scratch family transcriptional repressor 1","termid":"PBO:0073031"}


id: FYPO:0001334
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115593,115560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the regulation of a molecular function, biological process, or biological quality in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01330":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":3,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"regulation phenotype during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:28954740":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330","SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta","mad2delta"],"synonyms":[{"name":"fission yeast regulation phenotype during vegetative growth","type":"exact"},{"name":"regulation phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001334","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000619":null,"FYPO:0004318":null,"FYPO_EXT:0000001":null}}


id: GO:0046668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cell programmed cell death","synonyms":[{"name":"regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046668"}


id: GO:0090191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.","definition_xrefs":["GOC:dph","GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090189"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090191"}


id: PBO:0051404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 4, pseudogene","termid":"PBO:0051404"}


id: PBO:0078239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 20/OR9-2 (non-functional)","termid":"PBO:0078239"}


id: PBO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 16 (pseudogene)","termid":"PBO:0045605"}


id: PBO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comment","termid":"PBO:0000039"}


id: PBO:0070161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 75 pseudogene","termid":"PBO:0070161"}


id: GO:0042706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"}


id: PBO:0087539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form the active complex, Psy4p may provide additional substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; Pph3p and Psy2p localize to foci on meiotic chromosomes; putative homolog of mammalian R3","termid":"PBO:0087539"}


id: PATO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which starts later than the natural start time or the reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed","synonyms":[{"name":"late","type":"related"}],"termid":"PATO:0000502"}


id: GO:0008034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein binding (obsolete GO:0008034)","synonyms":[{"name":"lipoprotein binding","type":"exact"}],"termid":"GO:0008034"}


id: PBO:0075169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D3 polypeptide","termid":"PBO:0075169"}


id: GO:0051771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase biosynthetic process","termid":"GO:0051769"},{"relation_name":"negatively_regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051774"],"synonyms":[{"name":"down regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"down-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"downregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"downregulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"inhibition of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"inhibition of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of NO synthase biosynthesis","type":"exact"},{"name":"negative regulation of NO synthase biosynthetic process","type":"exact"},{"name":"negative regulation of NOS biosynthesis","type":"exact"},{"name":"negative regulation of NOS biosynthetic process","type":"exact"},{"name":"negative regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"negative regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051771"}


id: GO:0007397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The generation of organized tissues or of whole organs.","definition_xrefs":["GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete histogenesis and organogenesis (obsolete GO:0007397)","synonyms":[{"name":"histogenesis and organogenesis","type":"exact"}],"termid":"GO:0007397"}


id: GO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell proliferation","termid":"GO:0070345"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"negatively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of white fat cell proliferation","synonyms":[{"name":"down regulation of white fat cell proliferation","type":"exact"},{"name":"down-regulation of white fat cell proliferation","type":"exact"},{"name":"downregulation of white fat cell proliferation","type":"exact"},{"name":"inhibition of white fat cell proliferation","type":"narrow"},{"name":"negative regulation of white adipocyte proliferation","type":"exact"},{"name":"negative regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070351"}


id: PBO:0038741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 1","termid":"PBO:0038741"}


id: GO:0120062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any gastric emptying process, the process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of gastric emptying","termid":"GO:0120060"},{"relation_name":"positively_regulates","term_name":"gastric emptying","termid":"GO:0035483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric emptying","termid":"GO:0120062"}


id: GO:1903996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:nc","PMID:10518561","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"regulation of non-membrane spanning protein tyrosine kinase activity","termid":"GO:1903995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-membrane spanning protein tyrosine kinase activity","synonyms":[{"name":"down regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"down regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"down regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"down regulation of focal adhesion kinase activity","type":"narrow"},{"name":"down regulation of janus kinase 1 activity","type":"narrow"},{"name":"down regulation of janus kinase 2 activity","type":"narrow"},{"name":"down regulation of janus kinase 3 activity","type":"narrow"},{"name":"down regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"down regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"down regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"down-regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of focal adhesion kinase activity","type":"narrow"},{"name":"down-regulation of janus kinase 1 activity","type":"narrow"},{"name":"down-regulation of janus kinase 2 activity","type":"narrow"},{"name":"down-regulation of janus kinase 3 activity","type":"narrow"},{"name":"down-regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"down-regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"down-regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"downregulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"downregulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"downregulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"downregulation of focal adhesion kinase activity","type":"narrow"},{"name":"downregulation of janus kinase 1 activity","type":"narrow"},{"name":"downregulation of janus kinase 2 activity","type":"narrow"},{"name":"downregulation of janus kinase 3 activity","type":"narrow"},{"name":"downregulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"downregulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"downregulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"narrow"},{"name":"inhibition of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"inhibition of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of focal adhesion kinase activity","type":"narrow"},{"name":"inhibition of janus kinase 1 activity","type":"narrow"},{"name":"inhibition of janus kinase 2 activity","type":"narrow"},{"name":"inhibition of janus kinase 3 activity","type":"narrow"},{"name":"inhibition of non-membrane spanning protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of non-specific protein-tyrosine kinase activity","type":"narrow"},{"name":"inhibition of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"negative regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of focal adhesion kinase activity","type":"narrow"},{"name":"negative regulation of janus kinase 1 activity","type":"narrow"},{"name":"negative regulation of janus kinase 2 activity","type":"narrow"},{"name":"negative regulation of janus kinase 3 activity","type":"narrow"},{"name":"negative regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"negative regulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903996"}


id: PBO:0062736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 3 pseudogene","termid":"PBO:0062736"}


id: PBO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Cps3","termid":"PBO:0002068"}


id: PBO:0067660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 837, pseudogene","termid":"PBO:0067660"}


id: PBO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 1","termid":"PBO:0045445"}


id: PBO:0068639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 20, pseudogene","termid":"PBO:0068639"}


id: PBO:0038753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3","termid":"PBO:0038753"}


id: GO:0090654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubulo-vesicular structure located in the basolateral cytoplasm that participates in basolateral cargo recycling in polarized epithelial cells.","definition_xrefs":["PMID:16394106","PMID:21170358","PMID:11389442","PMID:17494872","PMID:9405315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"part_of","term_name":"basolateral cytoplasm","termid":"GO:0090652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"basolateral recycling endosome","termid":"GO:0090654"}


id: GO:0102495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A5 + O2 + 2-oxoglutarate = gibberellin A3 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"GA5 3beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14318"],"termid":"GO:0102495"}


id: PBO:0067201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 266, pseudogene","termid":"PBO:0067201"}


id: GO:0003986
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75651,87619],"is_not":false,"summary":null,"term":"GO:0003986"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O = acetate + CoA + H+.","definition_xrefs":["EC:3.1.2.1","RHEA:20289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2066779","MetaCyc:ACETYL-COA-HYDROLASE-RXN","Reactome:R-HSA-390304","KEGG_REACTION:R00227"],"synonyms":[{"name":"acetyl coenzyme A acylase activity","type":"related"},{"name":"acetyl coenzyme A deacylase activity","type":"related"},{"name":"acetyl coenzyme A hydrolase activity","type":"related"},{"name":"acetyl-CoA acylase activity","type":"related"},{"name":"acetyl-CoA deacylase activity","type":"related"},{"name":"acetyl-CoA thiol esterase activity","type":"related"}],"termid":"GO:0003986","terms_by_termid":{"GO:0003986":null}}


id: GO:0140767
data:
  {"annotated_genes":["SJAG_03535","SJAG_01617","SJAG_02753","SJAG_02651","SJAG_02162","SJAG_00262","SJAG_01068","SJAG_00192","SJAG_02822","SJAG_00656","SJAG_01022","SJAG_00651","SJAG_04035","SJAG_03218","SJAG_01392","SJAG_03651"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114629],"is_not":false,"summary":null,"term":"GO:0140767"},{"annotations":[101023,94629,112901,111945,103388,105262,93946,107199,103368,100746,95788,112999,91721,111790,97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990756"}]},"cv_name":"molecular_function","definition":"An adaptor that brings together an enzyme and its substrate. Adaptors recruit the substrate to its enzyme, thus contributing to substrate selection and specificity.","definition_xrefs":["PMID:16250895","PMID:34358446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00262":null,"SJAG_00651":null,"SJAG_00656":null,"SJAG_01022":null,"SJAG_01068":null,"SJAG_01392":null,"SJAG_01617":null,"SJAG_02162":null,"SJAG_02651":null,"SJAG_02753":null,"SJAG_02822":null,"SJAG_03218":null,"SJAG_03535":null,"SJAG_03651":null,"SJAG_04035":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"enzyme-substrate adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein substrate chaperone activity","type":"related"},{"name":"protein-substrate adaptor activity","type":"broad"}],"termid":"GO:0140767","terms_by_termid":{"GO:0140767":null,"GO:1990756":null}}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: PBO:0059060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1B","termid":"PBO:0059060"}


id: PBO:0088956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase Ppm2","termid":"PBO:0088956"}


id: GO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading messenger RNA (mRNA) within the mitochondrion.","definition_xrefs":["PMID:19864255","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"},{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mitochondrial mRNA surveillance","synonyms":[{"name":"mitochondrial aberrant RNA catabolic process","type":"exact"},{"name":"mitochondrial mRNA quality control","type":"exact"},{"name":"mitochondrial messenger RNA surveillance","type":"exact"}],"termid":"GO:0035946"}


id: GO:0140076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipoprotein transport.","definition_xrefs":["PMID:26501192","GOC:RPH","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"regulation of lipoprotein transport","termid":"GO:0140075"},{"relation_name":"negatively_regulates","term_name":"lipoprotein transport","termid":"GO:0042953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein transport","termid":"GO:0140076"}


id: PBO:0081767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 699","termid":"PBO:0081767"}


id: GO:0036103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Kdo2-lipid A, a lipopolysaccharide (LPS) component.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"Kdo2-lipid A metabolic process","synonyms":[{"name":"Kdo2-lipid A metabolism","type":"exact"}],"termid":"GO:0036103"}


id: GO:1905699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:TermGenie","GOC:krc","GO_REF:0000058","PMID:15198509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"regulation of drug transmembrane export","type":"narrow"},{"name":"regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905699"}


id: PBO:0075251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 3","termid":"PBO:0075251"}


id: GO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of plasma membrane","termid":"GO:0031232"},{"relation_name":"part_of","term_name":"periplasmic side of plasma membrane","termid":"GO:0098567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0009986"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of plasma membrane","secondary_identifiers":["GO:0031238"],"synonyms":[{"name":"extrinsic to external leaflet of plasma membrane, in periplasmic space","type":"narrow"},{"name":"extrinsic to external side of plasma membrane, in periplasmic space","type":"narrow"}],"termid":"GO:0031236"}


id: PBO:0034416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_results_in_movement_of","termid":"PBO:0034416"}


id: FYPO:0003225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of microtubule polymerization, i.e. the addition of tubulin dimers to a microtubule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:23051734","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"},{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"normal microtubule polymerization rate","type":"exact"},{"name":"normal rate of microtubule growth","type":"related"},{"name":"normal rate of microtubule polymerisation","type":"exact"},{"name":"normal rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"normal rate of microtubule polymerization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003225"}


id: PBO:0044124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 10, pseudogene","termid":"PBO:0044124"}


id: GO:0010692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"}


id: PATO:0001344
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mating type (yeast)","synonyms":[{"name":"alpha","type":"broad"}],"termid":"PATO:0001344"}


id: GO:0038141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex containing two monomers of the tyrosine kinase receptor ERBB4 (also called HER4).","definition_xrefs":["Reactome:R-HSA-1250221","PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ERBB4-ERBB4 complex","synonyms":[{"name":"ERBB4 homodimer","type":"exact"}],"termid":"GO:0038141"}


id: PBO:0017919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, double strand break localizing Dbl7","termid":"PBO:0017919"}


id: PBO:0067743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 42","termid":"PBO:0067743"}


id: PR:Q9UST8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03401","PRO:DNx","PANTHER:PTHR10642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.06c","secondary_identifiers":["UniProtKB:Q9UST8"],"synonyms":[{"name":"RNase H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH1","type":"exact"}],"termid":"PR:Q9UST8"}


id: PR:Q09874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.11c","synonyms":[{"name":"Spom972h-SPAC12G12.11c","type":"exact"}],"termid":"PR:Q09874"}


id: PBO:0001328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin 13 (predicted)","termid":"PBO:0001328"}


id: FYPO:0000765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of leptomycin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to leptomycin B","synonyms":[{"name":"resistance to leptomycin B during mitotic cell cycle","type":"related"},{"name":"resistance to leptomycin B during vegetative growth","type":"exact"},{"name":"resistant to leptomycin B","type":"exact"}],"termid":"FYPO:0000765"}


id: GO:0102473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol dibenzoylmethane tautomer + UDP-alpha-D-glucose = 8C-beta-D-glucosyl-2-hydroxyeriodictyol + UDP(3-) + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"eriodictyol dibenzoylmethane tautomer 8C-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14079"],"termid":"GO:0102473"}


id: PBO:0056429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 2","termid":"PBO:0056429"}


id: PBO:0079521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRO3 protein tyrosine kinase","termid":"PBO:0079521"}


id: PBO:0049347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 5","termid":"PBO:0049347"}


id: GO:0022889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of serine from one side of a membrane to the other. Serine is 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","RHEA:35031"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity (obsolete GO:0022889)","termid":"GO:0022889"}


id: PR:P41391
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ran GTPase-activating protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ran GTPase-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.07","secondary_identifiers":["UniProtKB:P41391"],"synonyms":[{"name":"Spom972h-RANGAP1","type":"exact"},{"name":"protein rna1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41391"}


id: PBO:0074158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F2","termid":"PBO:0074158"}


id: GO:1902518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclophosphamide stimulus.","definition_xrefs":["GOC:TermGenie","GOC:dw","PMID:23648065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclophosphamide","termid":"GO:1902518"}


id: GO:2000846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of corticosteroid hormone secretion","synonyms":[{"name":"regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000846"}


id: PBO:0034069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-anabranch_of","termid":"PBO:0034069"}


id: GO:0061401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to a hypotonic environment (obsolete GO:0061401)","termid":"GO:0061401"}


id: GO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 7.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 7 signaling pathway","synonyms":[{"name":"TLR7 signaling pathway","type":"exact"},{"name":"toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034154"}


id: PBO:0052993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA4 antisense RNA 1","termid":"PBO:0052993"}


id: PBO:0076204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 14","termid":"PBO:0076204"}


id: GO:0097442
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite of a hippocampal CA3 pyramidal cell.","definition_xrefs":["NIF_Subcellular:nlx_subcell_1005001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"CA3 pyramidal cell dendrite","termid":"GO:0097442"}


id: PBO:0079458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 7","termid":"PBO:0079458"}


id: PR:O13828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dcp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA decapping complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.12","synonyms":[{"name":"Spom972h-dcp2","type":"exact"}],"termid":"PR:O13828"}


id: PBO:0027937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_oxygen_consumption_during_vegetative_growth","termid":"PBO:0027937"}


id: FYPO:0004129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cysteine-type peptidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased peptidase activity","termid":"FYPO:0000667"},{"relation_name":"is_a","term_name":"abnormal cysteine-type peptidase activity","termid":"FYPO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased cysteine-type peptidase activity","synonyms":[{"name":"increased caspase activity","type":"narrow"},{"name":"increased cysteine protease activity","type":"exact"}],"termid":"FYPO:0004129"}


id: GO:0015076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transporter activity (obsolete GO:0015076)","synonyms":[{"name":"heavy metal ion transporter activity","type":"exact"}],"termid":"GO:0015076"}


id: PBO:0029692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_single_irregular_mass","termid":"PBO:0029692"}


id: PATO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having an equal-sided rectangular form.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallelogram","termid":"PATO:0002317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"square","termid":"PATO:0000413"}


id: PBO:0087683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the multiprotein cohesin complex; essential protein involved in chromosome segregation and in double-strand DNA break repair; SMC chromosomal ATPase family member, binds DNA with a preference for DNA with secondary structure","termid":"PBO:0087683"}


id: FYPO:0007764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which lipid droplets are larger than normal, and are surrounded by endoplasmic reticulum. Fewer droplets than normal may be present.","definition_xrefs":["PomBase:mah","PMID:25318672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid droplet morphology","termid":"FYPO:0000356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"enlarged lipid droplets surrounded by endoplasmic reticulum","references_by_uniquename":{"PMID:25318672":null},"synonyms":[{"name":"enlarged lipid droplets surrounded by ER","type":"exact"},{"name":"enlarged lipid droplets surrounded by endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"enlarged lipid droplets surrounded by endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"large lipid droplets surrounded by endoplasmic reticulum","type":"exact"}],"termid":"FYPO:0007764"}


id: GO:0036123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 dimethylation (obsolete GO:0036123)","synonyms":[{"name":"histone H3 K9 dimethylation","type":"exact"},{"name":"histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:0036123"}


id: GO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid inner membrane (obsolete GO:0031353)","synonyms":[{"name":"integral to plastid inner membrane","type":"narrow"}],"termid":"GO:0031353"}


id: PBO:0049601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 4","termid":"PBO:0049601"}


id: PBO:0038431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aladin WD repeat nucleoporin","termid":"PBO:0038431"}


id: PBO:0057504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 622","termid":"PBO:0057504"}


id: GO:0080165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, phloem sieve plate. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["PMID:19470642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"callose deposition in phloem sieve plate","termid":"GO:0080165"}


id: _global:homologous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"similar_to","termid":"_global:similar_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous_to","termid":"_global:homologous_to"}


id: GO:0040014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"multicellular organism growth","termid":"GO:0035264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of multicellular organism growth","synonyms":[{"name":"regulation of body growth","type":"exact"},{"name":"regulation of body size","type":"exact"}],"termid":"GO:0040014"}


id: GO:0015824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"proline transport","synonyms":[{"name":"L-proline transport","type":"narrow"}],"termid":"GO:0015824"}


id: PBO:0089978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Pob3","termid":"PBO:0089978"}


id: PBO:0030772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_thiabendazole","termid":"PBO:0030772"}


id: PBO:0082505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificity), and Som1p","termid":"PBO:0082505"}


id: GO:1900520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to pullulan","termid":"GO:1900518"},{"relation_name":"positively_regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to pullulan","synonyms":[{"name":"activation of response to pullulan","type":"narrow"},{"name":"up regulation of response to pullulan","type":"exact"},{"name":"up-regulation of response to pullulan","type":"exact"},{"name":"upregulation of response to pullulan","type":"exact"}],"termid":"GO:1900520"}


id: PBO:0053281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin-like receptor pseudogene 2","termid":"PBO:0053281"}


id: PR:Q9UTL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C144.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.05","synonyms":[{"name":"Spom972h-SPAC144.05","type":"exact"}],"termid":"PR:Q9UTL9"}


id: GO:0032589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a neuron projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuron projection membrane","termid":"GO:0032589"}


id: GO:0030705
data:
  {"annotated_genes":["SJAG_01662","SJAG_05319","SJAG_00938","SJAG_02336","SJAG_01371","SJAG_03540","SJAG_01224","SJAG_03073","SJAG_01863","SJAG_04597","SJAG_00851","SJAG_00918","SJAG_00140","SJAG_02286","SJAG_03437","SJAG_05266","SJAG_02561","SJAG_00368","SJAG_05220","SJAG_03011","SJAG_02431","SJAG_00594","SJAG_04143","SJAG_00113","SJAG_00332","SJAG_01297","SJAG_01775","SJAG_01613","SJAG_03673","SJAG_02045","SJAG_04001","SJAG_01546","SJAG_05185","SJAG_01211","SJAG_00397","SJAG_02731","SJAG_02761","SJAG_01370","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88014,93747,99125,107217,97583,110115,83987,96880,87562,99417,107564,91381,107386,87183,113085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[102747,107388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"},{"annotations":[93823,95392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[87564,83991,91383,95393,93749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90587],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[99909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[114776,96543,104431,100064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[110256,103666,85349,87171,94795,96671,92948,113060,105053,85949,106064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[87332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[104302,112338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[100698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00938":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03011":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cytoskeleton-dependent intracellular transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030705","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030050":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1903563":null,"GO:1990976":null}}


id: PBO:0047858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q31)","termid":"PBO:0047858"}


id: GO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an ectoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of ectodermal cell fate specification","termid":"GO:0042665"},{"relation_name":"negatively_regulates","term_name":"ectodermal cell fate specification","termid":"GO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ectodermal cell fate specification","synonyms":[{"name":"down regulation of ectodermal cell fate specification","type":"exact"},{"name":"down-regulation of ectodermal cell fate specification","type":"exact"},{"name":"downregulation of ectodermal cell fate specification","type":"exact"},{"name":"inhibition of ectodermal cell fate specification","type":"narrow"},{"name":"negative regulation of ectoderm cell fate specification","type":"exact"},{"name":"suppression of ectoderm cell fate","type":"exact"},{"name":"suppression of ectodermal cell fate","type":"exact"}],"termid":"GO:0042666"}


id: PBO:0055737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 3","termid":"PBO:0055737"}


id: PBO:0017625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4a (predicted)","termid":"PBO:0017625"}


id: PBO:0042188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin C","termid":"PBO:0042188"}


id: PBO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R52","termid":"PBO:0000298"}


id: SO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_acceptor_variant (SO:0001574) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_acceptor_variant","termid":"SO:0001574"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant_NMD_escaping","synonyms":[{"name":"splice acceptor variant-NMD escaping","type":"exact"},{"name":"splice acceptor variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002328"}


id: PBO:0111463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase non-catalytic subunit Trm6","termid":"PBO:0111463"}


id: PBO:0050419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein F","termid":"PBO:0050419"}


id: PBO:0091503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-L/borderline left, centromere proximal ncRNA","termid":"PBO:0091503"}


id: GO:0048031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trisaccharide. Trisaccharides are sugars composed of three monosaccharide units.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"trisaccharide binding","termid":"GO:0048031"}


id: PBO:0078967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 6-1","termid":"PBO:0078967"}


id: PBO:0086945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for alpha-factor pheromone; seven transmembrane-domain GPCR that interacts with both pheromone and a heterotrimeric G protein to initiate the signaling response that leads to mating between haploid a and alpha cells","termid":"PBO:0086945"}


id: SO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in the CDS region that causes a conformational change in the resulting polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3D_polypeptide_structure_variant","termid":"SO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conformational_change_variant","synonyms":[{"name":"conformational change variant","type":"exact"}],"termid":"SO:0001601"}


id: GO:2000279
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"negatively_regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA anabolism","type":"exact"},{"name":"negative regulation of DNA biosynthesis","type":"exact"},{"name":"negative regulation of DNA formation","type":"exact"},{"name":"negative regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000279","terms_by_termid":{"GO:1904332":null}}


id: PR:O94286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23418:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.01","secondary_identifiers":["UniProtKB:O94286"],"synonyms":[{"name":"ARD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Fe-ARD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC887.01","type":"related"},{"name":"Spom972h-ADI1","type":"exact"},{"name":"acireductone dioxygenase (Fe(2+)-requiring) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94286"}


id: PBO:0049795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 1","termid":"PBO:0049795"}


id: PBO:0030259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloramphenicol","termid":"PBO:0030259"}


id: PBO:0039668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit sigma 1","termid":"PBO:0039668"}


id: PBO:0079483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin","termid":"PBO:0079483"}


id: GO:0046009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of female receptivity","termid":"GO:0045925"},{"relation_name":"is_a","term_name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female receptivity, post-mating","synonyms":[{"name":"activation of female receptivity, post-mating","type":"narrow"},{"name":"stimulation of female receptivity, post-mating","type":"narrow"},{"name":"up regulation of female receptivity, post-mating","type":"exact"},{"name":"up-regulation of female receptivity, post-mating","type":"exact"},{"name":"upregulation of female receptivity, post-mating","type":"exact"}],"termid":"GO:0046009"}


id: PATO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000213 neurobehavioral function (obsolete PATO:0000213)","termid":"PATO:0000213"}


id: GO:0021769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the orbitofrontal cortex over time from its initial formation until its mature state. The orbitofrontal cortex is a cerebral cortex region located in the frontal lobe.","definition_xrefs":["ISBN:0878937420","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"orbitofrontal cortex development","termid":"GO:0021769"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: PBO:0029143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_kinase_activity","termid":"PBO:0029143"}


id: GO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by circulating norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by circulating noradrenaline","type":"exact"}],"termid":"GO:0003117"}


id: PBO:0034047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_homology_relationship_with","termid":"PBO:0034047"}


id: PBO:0074847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 37","termid":"PBO:0074847"}


id: GO:0033340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pelvic fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"},{"relation_name":"is_a","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelvic fin development","termid":"GO:0033340"}


id: PATO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female fertility","termid":"PATO:0000277"}


id: GO:0035091
data:
  {"annotated_genes":["SJAG_04024","SJAG_02177","SJAG_00663","SJAG_00638","SJAG_05245","SJAG_00368","SJAG_02852","SJAG_00152","SJAG_03405","SJAG_04221","SJAG_00907","SJAG_00971","SJAG_02657","SJAG_00216","SJAG_01143","SJAG_02728","SJAG_00117","SJAG_02989","SJAG_00970","SJAG_01135","SJAG_04960","SJAG_04963","SJAG_01382","SJAG_01516","SJAG_01945","SJAG_02248","SJAG_03250","SJAG_02492","SJAG_01794","SJAG_04010","SJAG_01324","SJAG_04219","SJAG_04275","SJAG_01748","SJAG_02587","SJAG_02166","SJAG_00314","SJAG_01519","SJAG_01769","SJAG_04644","SJAG_01309","SJAG_03851","SJAG_01722","SJAG_00173","SJAG_02468","SJAG_00115","SJAG_05179","SJAG_04077","SJAG_00118","SJAG_03756","SJAG_01564","SJAG_01783","SJAG_00821","SJAG_02572","SJAG_00724","SJAG_02392","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62298,88467,89660,93627,95140,97876,99592,101126,103533,103795,104911,109029,110924,111355,113674,114112,115122],"is_not":false,"summary":null,"term":"GO:0035091"},{"annotations":[104374,102179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005545"},{"annotations":[92035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901981"},{"annotations":[98583,113589,84287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[94777,96438,95485,93780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[92110,108627,97871,96439,104824,95854,94778,87680,95988,95987,106163,105818,111375,93781,100987,105966,86777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[95449,102755,95486,102180,111036,113177,97928,97918,114610,115079,84219,85817,86945,98079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[98584,95450,94883,108667,96271,90680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to an inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives.","definition_xrefs":["PMID:11395417","GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00216":null,"SJAG_00314":null,"SJAG_00368":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00724":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00970":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01309":null,"SJAG_01324":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01564":null,"SJAG_01722":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01794":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02248":null,"SJAG_02392":null,"SJAG_02468":null,"SJAG_02492":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02657":null,"SJAG_02728":null,"SJAG_02852":null,"SJAG_02912":null,"SJAG_02989":null,"SJAG_03250":null,"SJAG_03405":null,"SJAG_03756":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04219":null,"SJAG_04221":null,"SJAG_04275":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null,"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide binding","type":"exact"}],"termid":"GO:0035091","terms_by_termid":{"GO:0005545":null,"GO:0005546":null,"GO:0005547":null,"GO:0032266":null,"GO:0035091":null,"GO:0070273":null,"GO:0080025":null,"GO:1901981":null}}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: PBO:0027785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation","termid":"PBO:0027785"}


id: PBO:0079645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 R2","termid":"PBO:0079645"}


id: FYPO:0005136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break formation","termid":"FYPO:0005136"}


id: PBO:0062358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily R member 2 pseudogene","termid":"PBO:0062358"}


id: PBO:0029444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutamine","termid":"PBO:0029444"}


id: MOD:01120
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","synonyms":[{"name":"2,2,5,7,8-pentamethyl-3,4-dihydro-2H-chromene-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-6-chromansulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-chromane-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulphonyl","type":"exact"},{"name":"3,4-dihydro-2,2,5,7,8-pentamethyl-2H-1-benzopyran-6-sulfonyl","type":"exact"},{"name":"Pmc","type":"exact"},{"name":"PmcRes","type":"exact"}],"termid":"MOD:01120"}


id: GO:0015443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out).","definition_xrefs":["EC:3.6.3.15"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-transporting two-sector ATPase activity (obsolete GO:0015443)","synonyms":[{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0015443"}


id: GO:1904987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell activation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:24255059","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"endothelial cell activation","termid":"GO:0042118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell activation","termid":"GO:1904987"}


id: PBO:0017895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9","termid":"PBO:0017895"}


id: GO:0048807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of female genitalia are generated and organized.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"part_of","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female genitalia morphogenesis","synonyms":[{"name":"female genital morphogenesis","type":"related"}],"termid":"GO:0048807"}


id: GO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"positive regulation of hypersensitivity","termid":"GO:0002885"},{"relation_name":"positively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IV hypersensitivity","synonyms":[{"name":"activation of type IV hypersensitivity","type":"narrow"},{"name":"stimulation of type IV hypersensitivity","type":"narrow"},{"name":"up regulation of type IV hypersensitivity","type":"exact"},{"name":"up-regulation of type IV hypersensitivity","type":"exact"},{"name":"upregulation of type IV hypersensitivity","type":"exact"}],"termid":"GO:0001809"}


id: GO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in B cells.","definition_xrefs":["GOC:jal","ISBN:0781735149","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction","synonyms":[{"name":"B lymphocyte tolerance induction","type":"exact"},{"name":"B-cell tolerance induction","type":"exact"},{"name":"B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002514"}


id: PBO:0031896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Tor2","termid":"PBO:0031896"}


id: PBO:0034358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with","termid":"PBO:0034358"}


id: PBO:0079627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 O","termid":"PBO:0079627"}


id: PATO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tangled","termid":"PATO:0001846"}


id: PATO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in exudate by virtue of the bearer's containing fibrin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinopurulent","termid":"PATO:0002116"}


id: PBO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 15","termid":"PBO:0072138"}


id: PBO:0077651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 3","termid":"PBO:0077651"}


id: PBO:0039232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 1","termid":"PBO:0039232"}


id: GO:0045109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"intermediate filament organization","synonyms":[{"name":"intermediate filament organisation","type":"exact"}],"termid":"GO:0045109"}


id: GO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific immune response mediated by antibodies. As in, but not restricted to, the taxon Protostomia (Protostomia, ncbi_taxonomy_id:33317).","definition_xrefs":["GOC:add","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete humoral defense mechanism (sensu Protostomia) (obsolete GO:0016065)","synonyms":[{"name":"humoral defence mechanism (sensu Protostomia)","type":"exact"},{"name":"humoral defense mechanism (sensu Protostomia)","type":"exact"}],"termid":"GO:0016065"}


id: GO:1904827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GOC:rph","PMID:22034194","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of hydrogen sulfide biosynthetic process","termid":"GO:1904826"},{"relation_name":"negatively_regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"down regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down regulation of hydrogen sulfide formation","type":"exact"},{"name":"down regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide formation","type":"exact"},{"name":"down-regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide anabolism","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide formation","type":"exact"},{"name":"downregulation of hydrogen sulfide synthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"inhibition of hydrogen sulfide anabolism","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthetic process","type":"narrow"},{"name":"inhibition of hydrogen sulfide formation","type":"narrow"},{"name":"inhibition of hydrogen sulfide synthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthetic process","type":"narrow"},{"name":"negative regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"negative regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulfide formation","type":"exact"},{"name":"negative regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904827"}


id: PBO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin like 1","termid":"PBO:0042931"}


id: PBO:0058805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7847","termid":"PBO:0058805"}


id: GO:0140602
data:
  {"annotated_genes":["SJAG_03161","SJAG_00302","SJAG_03745","SJAG_04187","SJAG_01186","SJAG_04140","SJAG_00335","SJAG_04601","SJAG_00082","SJAG_04055","SJAG_04768","SJAG_00178","SJAG_04645","SJAG_03300","SJAG_04855","SJAG_01408","SJAG_01805","SJAG_03543","SJAG_01837","SJAG_00471","SJAG_01374","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83719,84951,84952,85207,86190,87138,88414,89972,95198,98428,98511,100363,100452,101530,101893,107356,108210,108758,108759,108760,111041,111629,111630,112815],"is_not":false,"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"Inclusion bodies located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress or starvation.","definition_xrefs":["PMID:37128864","PMID:33176152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear inclusion body","termid":"GO:0042405"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleolar peripheral inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NuRs","type":"related"},{"name":"nucleolar ring","type":"narrow"}],"termid":"GO:0140602","terms_by_termid":{"GO:0140602":null}}


id: PBO:0048204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit beta2","termid":"PBO:0048204"}


id: PBO:0110812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor for ribosomal proteins Fhl1","termid":"PBO:0110812"}


id: SO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inverted repeat (SO:0000294) occurring at the 5-prime termini of a DNA transposon.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat","termid":"SO:0000481"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_terminal_inverted_repeat","synonyms":[{"name":"5' TIR","type":"exact"},{"name":"five prime terminal inverted repeat","type":"exact"}],"termid":"SO:0000420"}


id: GO:0015345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ferric enterobactin(out) + H+(out) = ferric enterobactin(in) + H+(in).","definition_xrefs":["TC:2.A.1.16.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ferric enterobactin:proton symporter activity","synonyms":[{"name":"ferric enterobactin:hydrogen symporter activity","type":"exact"},{"name":"ferric-enterobactin:proton symporter activity","type":"exact"}],"termid":"GO:0015345"}


id: PBO:0065981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAET1E antisense RNA 1","termid":"PBO:0065981"}


id: PBO:0076517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 19","termid":"PBO:0076517"}


id: PBO:0003119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 variant, CENP-T ortholog (predicted)","termid":"PBO:0003119"}


id: PR:O60180
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arx1 gene.","definition_xrefs":["UniProtKB:O60180","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metalloprotease arx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.05","synonyms":[{"name":"Spom972h-arx1","type":"exact"},{"name":"associated with ribosomal export complex protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60180"}


id: PBO:0053604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 636","termid":"PBO:0053604"}


id: GO:0033266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of choline across a membrane.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline transmembrane transporter activity","termid":"GO:0015220"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type choline transporter activity","synonyms":[{"name":"ABC-type choline transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent choline transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled choline transmembrane transporter activity","type":"related"},{"name":"choline-transporting ATPase activity","type":"related"}],"termid":"GO:0033266"}


id: PBO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg16","termid":"PBO:0036462"}


id: PBO:0051458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-46","termid":"PBO:0051458"}


id: PBO:0080432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 16","termid":"PBO:0080432"}


id: GO:0014859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle cell proliferation.","definition_xrefs":["CL:0000188","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle cell proliferation","termid":"GO:0014859"}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PMID:11242054","PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: FYPO:0001891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased RNA level of middle meiotic genes during late meiosis","type":"exact"},{"name":"increased level of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiotic nuclear division","type":"exact"},{"name":"increased level of middle meiotic gene transcripts during late meiosis","type":"exact"}],"termid":"FYPO:0001891"}


id: PR:Q9P7F2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao1 gene.","definition_xrefs":["UniProtKB:Q9P7F2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.04","synonyms":[{"name":"Spom972h-cao1","type":"exact"}],"termid":"PR:Q9P7F2"}


id: FYPO:0007117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to leucine starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"decreased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"decreased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during leucine starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to leucine starvation","type":"exact"},{"name":"reduced RNA level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007117"}


id: PBO:0046666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial splicing regulatory protein 1","termid":"PBO:0046666"}


id: GO:1901367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-cysteine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-cysteine","termid":"GO:1901367"}


id: PBO:0038585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 2","termid":"PBO:0038585"}


id: PBO:0049311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 1","termid":"PBO:0049311"}


id: GO:0019610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"3-hydroxyphenylacetate metabolic process","termid":"GO:0019609"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxyphenylacetate catabolic process","secondary_identifiers":["MetaCyc:3-HYDROXYPHENYLACETATE-DEGRADATION-PWY"],"synonyms":[{"name":"3-hydroxyphenylacetate breakdown","type":"exact"},{"name":"3-hydroxyphenylacetate catabolism","type":"exact"},{"name":"3-hydroxyphenylacetate degradation","type":"exact"}],"termid":"GO:0019610"}


id: PBO:0047608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 3","termid":"PBO:0047608"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: GO:0033429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"CGU codon-amino acid adaptor activity","synonyms":[{"name":"CGT codon-amino acid adaptor activity","type":"exact"},{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033429"}


id: GO:0030852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granulocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulocyte differentiation","termid":"GO:0030852"}


id: PBO:0065025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 4","termid":"PBO:0065025"}


id: GO:0050142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 reduced flavodoxin + 6 H+ + N2 + n ATP = 6 oxidized flavodoxin + 2 NH3 + n ADP + n phosphate.","definition_xrefs":["MetaCyc:NITROGENASE-FLAVODOXIN-RXN","EC:1.19.6.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","termid":"GO:0016738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitrogenase (flavodoxin) activity","secondary_identifiers":["RHEA:15645"],"synonyms":[{"name":"reduced flavodoxin:dinitrogen oxidoreductase (ATP-hydrolysing)","type":"related"}],"termid":"GO:0050142"}


id: PBO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus, see mat1-Mi","termid":"PBO:0016123"}


id: PBO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo-transport protein Ypp1 (predicted)","termid":"PBO:0002572"}


id: PR:Q10078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00803","PRO:DNx","PANTHER:PTHR22967:SF29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.13","secondary_identifiers":["UniProtKB:Q10078"],"synonyms":[{"name":"Spom972h-STK16","type":"exact"}],"termid":"PR:Q10078"}


id: PBO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.7","termid":"PBO:0001373"}


id: FYPO:0002370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation in transcribed regions during vegetative growth","synonyms":[{"name":"increased histone H3-K56 acetylation in transcribed regions during mitotic cell cycle","type":"related"},{"name":"increased histone H3K56 acetylation in transcribed regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002370"}


id: PBO:0064008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 42","termid":"PBO:0064008"}


id: PBO:0044884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND10 pseudogene 1","termid":"PBO:0044884"}


id: PBO:0011125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase (predicted)","termid":"PBO:0011125"}


id: GO:0005352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alpha-glucoside(out) + H+(out) = alpha-glucoside(in) + H+(in). Alpha-glucosides include trehalose, maltose, turanose, isomaltose, alpha-methylglucoside, maltotriose, palatinose, trehalose and melezitose.","definition_xrefs":["TC:2.A.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucoside transmembrane transporter activity","termid":"GO:0015151"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"alpha-glucoside:proton symporter activity","synonyms":[{"name":"alpha-glucoside:hydrogen symporter activity","type":"exact"},{"name":"general alpha-glucoside transporter activity","type":"broad"},{"name":"general alpha-glucoside:hydrogen symporter activity","type":"exact"},{"name":"general alpha-glucoside:proton symporter activity","type":"exact"}],"termid":"GO:0005352"}


id: PBO:0005333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase","termid":"PBO:0005333"}


id: PBO:0025442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocystinuria","termid":"PBO:0025442"}


id: PBO:0057550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 664a","termid":"PBO:0057550"}


id: GO:0061886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mini excitatory postsynaptic potential. Mini excitatory postsynaptic potential is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.","definition_xrefs":["GOC:bc","PMID:20395454","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mini excitatory postsynaptic potential","termid":"GO:0061884"},{"relation_name":"is_a","term_name":"negative regulation of excitatory postsynaptic potential","termid":"GO:0090394"},{"relation_name":"negatively_regulates","term_name":"mini excitatory postsynaptic potential","termid":"GO:0098816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of mini excitatory postsynaptic potential","termid":"GO:0061886"}


id: PBO:0066961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 263","termid":"PBO:0066961"}


id: PBO:0039937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 1A","termid":"PBO:0039937"}


id: GO:0033281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three proteins integral to the cytoplasmic membrane of bacteria and membranes of organelles derived from bacteria (chloroplasts and mitochondria) involved in membrane transport of folded proteins.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"TAT protein transport complex","synonyms":[{"name":"TAT protein secretion complex","type":"narrow"},{"name":"TAT protein translocation system complex","type":"narrow"},{"name":"Twin-arginine translocation complex","type":"narrow"}],"termid":"GO:0033281"}


id: PATO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leaf-like","termid":"PATO:0002457"}


id: PBO:0058478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5585","termid":"PBO:0058478"}


id: RO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","termid":"RO:0002559"}


id: PBO:0085892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in secretion of proteins that lack classical secretory signal sequences; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0085892"}


id: FYECO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which N-acetyl-L-cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ N-acetyl-L-cysteine","synonyms":[{"name":"NAC added","type":"exact"},{"name":"acetylcysteine added","type":"exact"}],"termid":"FYECO:0000119"}


id: SO:1000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome which is a copy of another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"free","termid":"SO:0001516"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"},{"relation_name":"is_a","term_name":"free_duplication","termid":"SO:1000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_ring_duplication","synonyms":[{"name":"(Drosophila)R","type":"related"},{"name":"free ring duplication","type":"exact"}],"termid":"SO:1000145"}


id: GO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular filtration. Glomerular filtration is the process in which blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of blood volume","termid":"GO:0001977"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"glomerular filtration","termid":"GO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerular filtration","termid":"GO:0003093"}


id: PBO:0089182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Hrf1","termid":"PBO:0089182"}


id: GO:0075209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host cAMP-mediated signal transduction (obsolete GO:0075209)","synonyms":[{"name":"positive regulation by symbiont of host cAMP-mediated signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075209"}


id: GO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:rl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood vessel endothelial cell migration","termid":"GO:0043536"},{"relation_name":"is_a","term_name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"},{"relation_name":"positively_regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090050"}


id: GO:0072234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric nephron tubule over time, from its initial formation to the mature structure. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"metanephric tubule development","termid":"GO:0072170"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule development","termid":"GO:0072234"}


id: PBO:0059442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A13","termid":"PBO:0059442"}


id: PBO:0040765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3","termid":"PBO:0040765"}


id: GO:1905908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GOC:aruk","PMID:23106396","GO_REF:0000058","GOC:TermGenie","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"is_a","term_name":"regulation of amyloid fibril formation","termid":"GO:1905906"},{"relation_name":"positively_regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid fibril formation","synonyms":[{"name":"activation of amyloid fibril assembly","type":"related"},{"name":"activation of amyloid fibril formation","type":"narrow"},{"name":"activation of amyloid structure assembly","type":"related"},{"name":"activation of amyloid structure formation","type":"related"},{"name":"positive regulation of amyloid fibril assembly","type":"related"},{"name":"positive regulation of amyloid structure assembly","type":"related"},{"name":"positive regulation of amyloid structure formation","type":"related"},{"name":"up regulation of amyloid fibril assembly","type":"related"},{"name":"up regulation of amyloid fibril formation","type":"exact"},{"name":"up regulation of amyloid structure assembly","type":"related"},{"name":"up regulation of amyloid structure formation","type":"related"},{"name":"up-regulation of amyloid fibril assembly","type":"related"},{"name":"up-regulation of amyloid fibril formation","type":"exact"},{"name":"up-regulation of amyloid structure assembly","type":"related"},{"name":"up-regulation of amyloid structure formation","type":"related"},{"name":"upregulation of amyloid fibril assembly","type":"related"},{"name":"upregulation of amyloid fibril formation","type":"exact"},{"name":"upregulation of amyloid structure assembly","type":"related"},{"name":"upregulation of amyloid structure formation","type":"related"}],"termid":"GO:1905908"}


id: GO:0032090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Pyrin domain binding","synonyms":[{"name":"DAPIN domain binding","type":"exact"},{"name":"PAAD domain binding","type":"exact"}],"termid":"GO:0032090"}


id: GO:0097594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Trilaminar structure extending perpendicularly into the cytoplasm along the length of ventral disc microtubules in Giardia species (trophozoite stage). Constituents of dorsal microribbons (also called dorsal ribbons or microribbons) include alpha-coiled-helix proteins approximately 29 to 38 kDa in size. These proteins line the edges of the microribbons but are not found in microtubules. Tubulins are not found in microribbons.","definition_xrefs":["PMID:11432808","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc dorsal microribbon","synonyms":[{"name":"dorsal microribbon","type":"broad"},{"name":"dorsal ribbon","type":"broad"},{"name":"microribbon","type":"broad"},{"name":"ventral disk dorsal microribbon","type":"related"}],"termid":"GO:0097594"}


id: FYPO:0002099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during cellular response to HU","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002099"}


id: PBO:0051627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILRUN pseudogene 1","termid":"PBO:0051627"}


id: PBO:0003455
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.25","termid":"PBO:0003455"}


id: PBO:0051220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-34-1 (pseudogene)","termid":"PBO:0051220"}


id: FYPO:0004540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is incrsasd. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased chromatin silencing","synonyms":[{"name":"increased chromatin silencing during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0004540"}


id: PBO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug103","termid":"PBO:0016910"}


id: PBO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP helicase Irc3 (predicted)","termid":"PBO:0009350"}


id: GO:1990113
data:
  {"annotated_genes":["SJAG_04012","SJAG_04093"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102636,114169],"is_not":false,"summary":null,"term":"GO:1990113"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase I complex.","definition_xrefs":["GOC:rb","PMID:23459708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"RNA polymerase I assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase I complex assembly","type":"exact"},{"name":"RNA Polymerase I complex assembly","type":"exact"}],"termid":"GO:1990113","terms_by_termid":{"GO:1990113":null}}


id: PBO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR51b (predicted)","termid":"PBO:0000835"}


id: PBO:0043220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin binding box of aftiphilin containing 1","termid":"PBO:0043220"}


id: PBO:0030763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_zinc_ion","termid":"PBO:0030763"}


id: PATO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's vertical distance of a point above or below a reference surface.","definition_xrefs":["Trailillustrated:Trailillustrated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elevation","termid":"PATO:0001687"}


id: PBO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1 (predicted)","termid":"PBO:0018061"}


id: GO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7alpha-hydroxycholest-4-en-3-one + H+ + NADPH + O2 = 7alpha,12alpha-dihydroxycholest-4-en-3-one + H2O + NADP+.","definition_xrefs":["PMID:10051404","PMID:1400444","RHEA:46752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 12-alpha-hydroxylase activity","termid":"GO:0008397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7alpha-hydroxycholest-4-en-3-one 12alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-193845","KEGG_REACTION:R04826","MetaCyc:1.14.13.95-RXN","Reactome:R-HSA-193709","Reactome:R-HSA-192157"],"synonyms":[{"name":"7alpha-hydroxy-4-cholesten-3-one 12alpha-monooxygenase activity","type":"related"}],"termid":"GO:0033778"}


id: GO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.","definition_xrefs":["GOC:rk","PMID:15536015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, engulfment","termid":"GO:0006911"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"engulfment of apoptotic cell","synonyms":[{"name":"engulfment of apoptotic cell corpse","type":"exact"},{"name":"engulfment of cell corpse","type":"exact"}],"termid":"GO:0043652"}


id: PBO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP citrate synthase subunit 1 (predicted)","termid":"PBO:0004261"}


id: PBO:0076817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense RNA 1","termid":"PBO:0076817"}


id: PBO:0034198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_ohnology_relationship_with","termid":"PBO:0034198"}


id: GO:0021634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the optic nerve. This process pertains to the initial formation of a structure from unspecified parts. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve formation","synonyms":[{"name":"CN II biosynthesis","type":"related"},{"name":"CN II formation","type":"related"}],"termid":"GO:0021634"}


id: PR:O94600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TELO2-interacting protein 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEL2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.13c","secondary_identifiers":["UniProtKB:O94600"],"synonyms":[{"name":"Spom972h-TTI1","type":"exact"}],"termid":"PR:O94600"}


id: PBO:0074610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14B","termid":"PBO:0074610"}


id: PR:O43068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin complex subunit mde4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.04","synonyms":[{"name":"Spom972h-mde4","type":"exact"},{"name":"mei4-dependent protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43068"}


id: PBO:0044378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 2","termid":"PBO:0044378"}


id: GO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branches of the fetal placental villi are generated and organized. The villous part of the placenta is called the labyrinth layer.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in labyrinthine layer morphogenesis","termid":"GO:0060670"}


id: GO:0006441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete binding to mRNA cap (obsolete GO:0006441)","synonyms":[{"name":"binding to mRNA cap","type":"exact"}],"termid":"GO:0006441"}


id: SO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence surrounding a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_flanking_region","synonyms":[{"name":"transposable element flanking region","type":"exact"}],"termid":"SO:0000364"}


id: PBO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disorders","termid":"PBO:0002953"}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: PBO:0004464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator (predicted)","termid":"PBO:0004464"}


id: PBO:0052085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAZN antisense RNA 1","termid":"PBO:0052085"}


id: GO:0032606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of type I interferon due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["ISBN:0126896631","GOC:add","PMID:15546383","PMID:16681834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"type I interferon production","secondary_identifiers":["GO:0045351","GO:0072641"],"synonyms":[{"name":"interferon type I production","type":"exact"},{"name":"type I IFN production","type":"exact"},{"name":"type I interferon biosynthetic process","type":"narrow"},{"name":"type I interferon secretion","type":"narrow"}],"termid":"GO:0032606"}


id: FYPO:0002937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased pre-mRNA level","synonyms":[{"name":"decreased accumulation of pre-mRNA transcripts","type":"related"},{"name":"decreased pre-mRNA accumulation","type":"related"},{"name":"decreased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"decreased pre-mRNA level during vegetative growth","type":"exact"},{"name":"decreased pre-mRNA transcript level","type":"exact"},{"name":"reduced pre-mRNA level","type":"exact"}],"termid":"FYPO:0002937"}


id: GO:0004378
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98456],"is_not":false,"summary":null,"term":"GO:0004378"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP-alpha-D-mannose = alpha-D-Man-(1->3)-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP + H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->3)-D-mannosyl-D-mannose linkage.","definition_xrefs":["EC:2.4.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29515","MetaCyc:RXN-5462"],"synonyms":[{"name":"GDP-D-mannose:D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol 3-alpha-mannosyltransferase activity","type":"exact"},{"name":"GDP-mannose-oligosaccharide-lipid mannosyltransferase II","type":"related"},{"name":"GDP-mannose:glycolipid 1,3-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 3-alpha-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-oligosaccharide-lipid II mannosyltransferase activity","type":"related"},{"name":"mannosyltransferase II activity","type":"related"}],"termid":"GO:0004378","terms_by_termid":{"GO:0004378":null}}


id: GO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via the activity of voltage-gated calcium channels.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051929)","synonyms":[{"name":"activation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via voltage gated calcium channel","type":"exact"},{"name":"stimulation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via voltage gated calcium channel","type":"exact"}],"termid":"GO:0051929"}


id: PBO:0090877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28","termid":"PBO:0090877"}


id: PATO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's being incapable perceiving differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indiscriminate","termid":"PATO:0001318"}


id: PBO:0049468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase 2","termid":"PBO:0049468"}


id: GO:0038110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-2 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-2","termid":"GO:0071352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-2-mediated signaling pathway","synonyms":[{"name":"IL-2-mediated signaling pathway","type":"exact"},{"name":"interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:0038110"}


id: PBO:0051557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 10 receptor subunit beta","termid":"PBO:0051557"}


id: GO:0102435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin(1-) + S-adenosyl-L-methionine = 7-O-methylmyricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"myricetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13910"],"termid":"GO:0102435"}


id: GO:2001134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a carbon monoxide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"methane biosynthetic process from carbon monoxide","termid":"GO:2001134"}


id: PBO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU family","termid":"PBO:0001870"}


id: PBO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II beta subunit","termid":"PBO:0015265"}


id: GO:0033254
data:
  {"annotated_genes":["SJAG_01319","SJAG_01080","SJAG_03442"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85308,102829,110669],"is_not":false,"summary":null,"term":"GO:0033254"}]},"cv_name":"cellular_component","definition":"A protein complex that contains four related proteins that have been implicated in several membrane-related processes, such as sorting of H+-translocating ATPases, endocytosis, ER-Golgi trafficking, vacuole fusion, vacuolar polyphosphate homeostasis and the microautophagic scission of vesicles into the vacuolar lumen. The complex is enriched at the vacuolar membrane, but also found in other cellular compartments, including the ER and the cell periphery. In Saccharomyces, the subunits are Vtc1p, Vtc2p, Vtc3p and Vtc4p.","definition_xrefs":["PMID:34544285","PMID:17079729","PMID:11823419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01080":null,"SJAG_01319":null,"SJAG_03442":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"vacuolar transporter chaperone complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"VTC complex","type":"exact"}],"termid":"GO:0033254","terms_by_termid":{"GO:0033254":null}}


id: PATO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000539 drought sensitivity value (obsolete PATO:0000539)","termid":"PATO:0000539"}


id: PBO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIM1 family serine/threonine protein kinase Cdr1/Nim1","termid":"PBO:0001672"}


id: GO:0051383
data:
  {"annotated_genes":["SJAG_02664","SJAG_02465","SJAG_04638","SJAG_03048","SJAG_03220","SJAG_00718","SJAG_00794","SJAG_01837","SJAG_03217","SJAG_01374","SJAG_05321","SJAG_02513","SJAG_04177"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87139,91484],"is_not":false,"summary":null,"term":"GO:0051383"},{"annotations":[101628,101701,106483,108349,86973,109720,113570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051382"},{"annotations":[114062],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[112825,85851,98533],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:mah","GOC:ai","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00794":null,"SJAG_01374":null,"SJAG_01837":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_04177":null,"SJAG_04638":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinetochore organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"kinetochore organisation","type":"exact"},{"name":"kinetochore organization and biogenesis","type":"related"}],"termid":"GO:0051383","terms_by_termid":{"GO:0051382":null,"GO:0051383":null,"GO:1905560":null,"GO:1905561":null}}


id: PBO:0054760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2172","termid":"PBO:0054760"}


id: PBO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 heavy chain 1","termid":"PBO:0045676"}


id: PBO:0074885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63","termid":"PBO:0074885"}


id: PBO:0017845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transmembrane transporter Cat1","termid":"PBO:0017845"}


id: GO:0052582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pulegone + H+ + NADPH + O2 = (R)-menthofuran + 2 H2O + NADP+.","definition_xrefs":["EC:1.14.14.143","RHEA:25658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-menthofuran synthase activity","secondary_identifiers":["KEGG_REACTION:R08923","MetaCyc:1.14.13.104-RXN"],"synonyms":[{"name":"(+)-MFS activity","type":"broad"},{"name":"(+)-pulegone 9-hydroxylase activity","type":"related"},{"name":"(+)-pulegone,NADPH:oxygen oxidoreductase (9-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 menthofuran synthase activity","type":"related"},{"name":"menthofuran synthase activity","type":"related"}],"termid":"GO:0052582"}


id: GO:1905828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:12432938","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of prostaglandin catabolic process","synonyms":[{"name":"regulation of prostaglandin breakdown","type":"exact"},{"name":"regulation of prostaglandin catabolism","type":"exact"},{"name":"regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905828"}


id: PBO:0060374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOZ3 antisense RNA 1","termid":"PBO:0060374"}


id: GO:0086077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an AV node cell to a bundle of His cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in atrioventricular node cell-bundle of His cell electrical coupling","type":"exact"}],"termid":"GO:0086077"}


id: FYPO:0004068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0071620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004068"}


id: PBO:0090746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Esf2","termid":"PBO:0090746"}


id: PBO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim9","termid":"PBO:0090573"}


id: PBO:0075064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-27","termid":"PBO:0075064"}


id: PBO:0040854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S6 pseudogene 1","termid":"PBO:0040854"}


id: PBO:0057767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2113","termid":"PBO:0057767"}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: GO:0008849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: enterobactin + 3 H2O = 3 N-23-dihydroxybenzoyl-L-serine + 3 H+.","definition_xrefs":["MetaCyc:RXN0-1661","PMID:4565531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"enterochelin esterase activity","secondary_identifiers":["RHEA:28018"],"synonyms":[{"name":"enterobactin esterase activity","type":"exact"}],"termid":"GO:0008849"}


id: _global:qualifier
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualifier","secondary_identifiers":["RO:0002573"],"termid":"_global:qualifier"}


id: PBO:0054057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1399","termid":"PBO:0054057"}


id: PBO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0000666"}


id: GO:0035795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["PMID:10781072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"negative regulation of membrane permeability","termid":"GO:1905709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"negative regulation of mitochondrial membrane permeability","synonyms":[{"name":"mitochondrial membrane impermeability","type":"related"},{"name":"mitochondrial membrane impermeabilization","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0035795"}


id: PBO:0053081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lecithin-cholesterol acyltransferase","termid":"PBO:0053081"}


id: GO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in lateral roots.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root branching","termid":"GO:0080181"}


id: FYPO:0008094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites at which the protein Rpa2 accumulates is greater than normal during vegetative growth.","definition_xrefs":["PMID:37237082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rpa2 foci during vegetative growth","termid":"FYPO:0008094"}


id: FYPO:0005088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that contains two nuclei and one or more septa, and undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al","PMID:15829570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, binucleate septated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, binucleate septated cell","type":"exact"}],"termid":"FYPO:0005088"}


id: PBO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium channel Cch1","termid":"PBO:0001701"}


id: PBO:0075287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 29","termid":"PBO:0075287"}


id: FYPO:0004729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed by the extension of existing nuclear microtubules arising from fragmentation of the mitotic spindle. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule formation from nuclear microtubules","termid":"FYPO:0004727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules following mitotic spindle microtubule fragmentation","type":"exact"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following spindle microtubule fragmentation during vegetative growth","type":"exact"}],"termid":"FYPO:0004729"}


id: GO:0036316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the SREBP-SCAP complex is maintained in the endoplasmic reticulum and prevented from moving elsewhere. The SREBP-SCAP complex is formed by the association of sterol regulatory element binding protein (SREBP) and SREBP-cleavage-activating protein (SCAP). In the absence of sterols, the SREBP-SCAP complex is packaged into COPII vesicles and travels to the Golgi apparatus to be processed. In the presence of sterols, the complex binds ER-resident proteins such as INSIG, which retain the complex in the ER.","definition_xrefs":["GOC:bf","PMID:16525117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in endoplasmic reticulum","termid":"GO:0035437"},{"relation_name":"is_a","term_name":"negative regulation of SREBP signaling pathway","termid":"GO:2000639"},{"relation_name":"part_of","term_name":"cellular response to sterol","termid":"GO:0036315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"SREBP-SCAP complex retention in endoplasmic reticulum","termid":"GO:0036316"}


id: PBO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member B","termid":"PBO:0047194"}


id: FYECO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted under semi-anaerobic conditions, where the level of oxygen is lower than normal.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-aerobic environment","synonyms":[{"name":"hypoxia","type":"related"},{"name":"hypoxic environment","type":"related"},{"name":"limited O atoms","type":"related"},{"name":"limited oxygen","type":"related"},{"name":"reduced oxygen level","type":"related"},{"name":"semi aerobic environment","type":"exact"},{"name":"semi-anaerobic environment","type":"exact"},{"name":"semiaerobic environment","type":"exact"},{"name":"semianaerobic environment","type":"exact"}],"termid":"FYECO:0000135"}


id: PBO:0058005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3928","termid":"PBO:0058005"}


id: PBO:0065123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D1","termid":"PBO:0065123"}


id: PBO:0048887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 6","termid":"PBO:0048887"}


id: MOD:01222
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-formyl-L-serine.","definition_xrefs":["Unimod:122#S","PubMed:15627961","PubMed:15799070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-formyl-L-serine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01222"}


id: PBO:0055640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3079","termid":"PBO:0055640"}


id: GO:0046432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolism","type":"exact"}],"termid":"GO:0046432"}


id: PBO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 3","termid":"PBO:0041903"}


id: PBO:0044380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP1B1 antisense RNA 1","termid":"PBO:0044380"}


id: PR:O13878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 75 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02060","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.13","secondary_identifiers":["UniProtKB:O13878"],"synonyms":[{"name":"Spom972h-WDR75","type":"exact"},{"name":"U3 protein 17 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13878"}


id: FYPO:0004583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome condensation is abnormal.","definition_xrefs":["PomBase:mah","PMID:23263988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome condensation","termid":"FYPO:0000159"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic chromosome condensation","synonyms":[{"name":"abnormal chromosome condensation during meiosis I","type":"exact"},{"name":"abnormal chromosome condensation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0004583"}


id: GO:0043511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with either an inhibin beta-A subunit, to form inhibin A, or an inhibin beta-B subunit, to form inhibin B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"inhibin complex","termid":"GO:0043511"}


id: GO:1904052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:pad","GO_REF:0000058","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"down regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"down-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"downregulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"inhibition of protein targeting to vacuole involved in autophagy","type":"narrow"}],"termid":"GO:1904052"}


id: PBO:0082524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell cycle-regulated gene of unknown function; promoter bound by Fkh2p; null mutant is sensitive to expression of the top1-T722A allele; TDA7 has a paralog, YDL211C, that arose from the whole genome duplication","termid":"PBO:0082524"}


id: GO:0098562
data:
  {"annotated_genes":["SJAG_04266","SJAG_05207","SJAG_03345","SJAG_05268","SJAG_02102","SJAG_01738","SJAG_04018","SJAG_04077","SJAG_00368","SJAG_02605","SJAG_04666","SJAG_04583","SJAG_01242","SJAG_01774","SJAG_00605","SJAG_01114","SJAG_04026","SJAG_01134","SJAG_01307","SJAG_04732","SJAG_02196","SJAG_02587","SJAG_03464","SJAG_03596","SJAG_02444","SJAG_04509","SJAG_02989","SJAG_02392","SJAG_00948","SJAG_02233","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91253,90885,90075,101985,106018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[85459,100968,102742,98659,96673,100614,111910,95414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[102743,107029,84110,84177,98576,88589,99885,85928,95135,88755,103196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[102744,92017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[106707],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[90397,102644,103290,105180,109995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The side of a membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00948":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02102":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04266":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04732":null,"SJAG_05207":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098562","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098554":null,"GO:0106186":null}}


id: GO:0032995
data:
  {"annotated_genes":["SJAG_04666","SJAG_02684","SJAG_00661","SJAG_04771","SJAG_02278","SJAG_00424","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88606,88886,96330],"is_not":false,"summary":null,"term":"GO:0032995"},{"annotations":[88599,83744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[91109,85643,88605,99006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the process in which a cell wall is synthesized, aggregates, and bonds together. The fungal-type cell wall contains beta-glucan and may contain chitin.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of fungal-type cell wall biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chitin- and beta-glucan-containing cell wall biogenesis","type":"related"}],"termid":"GO:0032995","terms_by_termid":{"GO:0032995":null,"GO:0070610":null,"GO:0140748":null}}


id: PBO:0068550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 1","termid":"PBO:0068550"}


id: PBO:0073230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 3","termid":"PBO:0073230"}


id: PBO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin","termid":"PBO:0042930"}


id: PBO:0065517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 2","termid":"PBO:0065517"}


id: PBO:0051402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 2, pseudogene","termid":"PBO:0051402"}


id: PBO:0050946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 20, pseudogene","termid":"PBO:0050946"}


id: PBO:0050498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B8","termid":"PBO:0050498"}


id: PBO:0083469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130","termid":"PBO:0083469"}


id: PBO:0078673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 6-1","termid":"PBO:0078673"}


id: _global:has_target_end_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from a an initial location to some destination l.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"_global:results_in_transport_to_from_or_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_end_location","secondary_identifiers":["RO:0002339"],"termid":"_global:has_target_end_location"}


id: PBO:0039249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L2","termid":"PBO:0039249"}


id: PBO:0087023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11A; expressed at twice the level of Rpl11Bp; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11A has a paralog, RPL11B, that arose from the whole genome duplication","termid":"PBO:0087023"}


id: PBO:0004644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Did2 (predicted)","termid":"PBO:0004644"}


id: FYPO:0007700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell is inviable and an abnormally low volume, and in which the G2/M transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PMID:1706223","PomBase:mah","PMID:33683349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0005447"],"is_obsolete":false,"name":"inviable small vegetative cell with premature mitotic G2/M phase transition","synonyms":[{"name":"inviable small cell with premature mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2 phase progression","type":"related"},{"name":"inviable small vegetative cell with advanced mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2 advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2/M transition advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic cell cycle advance at G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with premature cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with premature mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable small vegetative cell with premature mitotic G2/M transition","type":"exact"},{"name":"mitotic catastrophe","type":"related"}],"termid":"FYPO:0007700"}


id: PBO:0017438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transport_of","termid":"PBO:0017438"}


id: PBO:0029277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity_during_mitotic_metaphase","termid":"PBO:0029277"}


id: PATO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased female receptivity","synonyms":[{"name":"high female receptivity","type":"exact"}],"termid":"PATO:0001723"}


id: GO:0090310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of DNA methylation-dependent heterochromatin formation","termid":"GO:0090308"},{"relation_name":"negatively_regulates","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA methylation-dependent heterochromatin formation","synonyms":[{"name":"negative regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"negative regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090310"}


id: GO:0097161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DH (Dbl homology) domain of a protein. The DH domain contains three structurally conserved regions separated by more variable regions. It is composed of 11 alpha helices that are folded into a flattened, elongated alpha-helix bundle in which two of the three conserved regions, conserved region 1 (CR1) and conserved region 3 (CR3), are exposed near the centre of one surface. CR1 and CR3, together with a part of alpha-6 and the DH/PH (pleckstrin homology) junction site, constitute the Rho GTPase interacting pocket.","definition_xrefs":["PMID:12775584","InterPro:IPR000219","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"DH domain binding","termid":"GO:0097161"}


id: GO:0055066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent cations within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ceb"],"gene_count":0,"genotype_count":0,"name":"obsolete di-, tri-valent inorganic cation homeostasis (obsolete GO:0055066)","synonyms":[{"name":"di-, tri-valent inorganic cation homeostasis","type":"exact"}],"termid":"GO:0055066"}


id: PBO:0040368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 5","termid":"PBO:0040368"}


id: PBO:0089440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific low-complexity Glycine rich protein","termid":"PBO:0089440"}


id: PBO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomeric_regions_absent_from_linear_chromosomes","termid":"PBO:0033807"}


id: PBO:0084755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix iron chaperone; oxidizes and stores iron; interacts with Isu1p to promote Fe-S cluster assembly; mutation results in multiple Fe/S-dependent enzyme deficiencies; human frataxin homolog FXN is mutated in Friedrich's ataxia; human FTL gene can complement yeast yfh1 null mutant","termid":"PBO:0084755"}


id: GO:0019117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroxyfluorene + O2 = the corresponding 2-hydroxy-4-(oxo-1,3-dihydro-2H-inden-ylidene) but-2-enoic acid.","definition_xrefs":["UM-BBD_reactionID:r0422","GOC:mah","UM-BBD_reactionID:r0415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydroxyfluorene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0019117"}


id: PBO:0038655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 5, tartrate resistant","termid":"PBO:0038655"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: PBO:0040932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 3","termid":"PBO:0040932"}


id: PBO:0005023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora-B kinase Ark1","termid":"PBO:0005023"}


id: PR:Q7Z995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.18c gene.","definition_xrefs":["UniProtKB:Q7Z995","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.18c","synonyms":[{"name":"Spom972h-SPBC19G7.18c","type":"exact"}],"termid":"PR:Q7Z995"}


id: PBO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_mitosis","termid":"PBO:0036076"}


id: FYPO:0005207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type) when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:21965528","PomBase:mah","PMID:872891","PMID:689088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"normal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"normal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"normal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005207"}


id: GO:0009979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the introduction of an omega-3 double bond into an unsaturated 16-carbon fatty acid in a monogalactosyldiacylglycerol molecule.","definition_xrefs":["MetaCyc:RXN-8307","MetaCyc:RXN-8304","MetaCyc:RXN-1728","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega-3 fatty acid desaturase activity","termid":"GO:0042389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"16:0 monogalactosyldiacylglycerol desaturase activity","termid":"GO:0009979"}


id: PBO:0041199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD23 rRNA methyltransferase and ribosome maturation factor","termid":"PBO:0041199"}


id: FYPO:0002567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNAs transcribed from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcripts during vegetative growth","type":"exact"},{"name":"normal accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"normal centromeric outer repeat transcript accumulation","type":"related"},{"name":"normal centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"normal level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0002567"}


id: GO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization","termid":"GO:0003254"}


id: PBO:0071268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 2","termid":"PBO:0071268"}


id: GO:1990382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a melanosome, a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["PMID:22511774","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete melanosome assembly (obsolete GO:1990382)","synonyms":[{"name":"melanosome biogenesis","type":"exact"}],"termid":"GO:1990382"}


id: PBO:0028250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cytokinesis","termid":"PBO:0028250"}


id: GO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-2-oxoglutaramate + H2O = 2-oxoglutarate + methylammonium.","definition_xrefs":["EC:3.5.1.36","RHEA:24108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-methyl-2-oxoglutaramate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01587","MetaCyc:N-METHYL-2-OXOGLUTARAMATE-HYDROLASE-RXN"],"synonyms":[{"name":"5-hydroxy-N-methylpyroglutamate synthase activity","type":"related"},{"name":"N-methyl-2-oxoglutaramate methylamidohydrolase activity","type":"related"}],"termid":"GO:0050130"}


id: PBO:0029583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_vegetative_growth","termid":"PBO:0029583"}


id: PBO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase (predicted)","termid":"PBO:0000783"}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:15189151","PubMed:11344537","PubMed:12175151","Unimod:65#K","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: FYPO:0002889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains one or more abnormal septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated vegetative cell with abnormal septum","synonyms":[{"name":"elongated inviable cell with abnormal septum","type":"exact"},{"name":"inviable elongated abnormally septated vegetative cell","type":"exact"},{"name":"inviable elongated cell with abnormal septum during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with abnormal septum during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell with abnormal septum","type":"exact"}],"termid":"FYPO:0002889"}


id: PBO:0050430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 1","termid":"PBO:0050430"}


id: PBO:0050096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 6","termid":"PBO:0050096"}


id: GO:0008174
data:
  {"annotated_genes":["SJAG_00325","SJAG_02099","SJAG_04034","SJAG_05693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86654,90109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062152"},{"annotations":[112899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[105935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001734"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_02099":null,"SJAG_04034":null,"SJAG_05693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"mRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008174","terms_by_termid":{"GO:0001734":null,"GO:0004482":null,"GO:0062152":null}}


id: SO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains the code for two gene products.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycistronic","termid":"SO:0000880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic","termid":"SO:0000879"}


id: GO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin D binding","synonyms":[{"name":"calciferol binding","type":"narrow"},{"name":"cholecalciferol binding","type":"narrow"},{"name":"ergocalciferol binding","type":"narrow"}],"termid":"GO:0005499"}


id: PBO:0038684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 3","termid":"PBO:0038684"}


id: GO:0060649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland bud grows along its axis.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud elongation","termid":"GO:0060649"}


id: PBO:0055893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14","termid":"PBO:0055893"}


id: GO:0004134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1->4)-alpha-D-glucan.","definition_xrefs":["EC:2.4.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"4-alpha-glucanotransferase activity","secondary_identifiers":["MetaCyc:RXN-1828","Reactome:R-HSA-71552","MetaCyc:AMYLOMALT-RXN","MetaCyc:RXN-9023"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan 4-alpha-D-glycosyltransferase activity","type":"related"},{"name":"D-enzyme activity","type":"related"},{"name":"amylomaltase activity","type":"related"},{"name":"debranching enzyme maltodextrin glycosyltransferase activity","type":"related"},{"name":"dextrin glycosyltransferase activity","type":"related"},{"name":"dextrin transglycosylase activity","type":"related"},{"name":"disproportionating enzyme activity","type":"related"},{"name":"oligo-1,4-1,4-glucantransferase activity","type":"related"}],"termid":"GO:0004134"}


id: PBO:0044105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member B1","termid":"PBO:0044105"}


id: GO:0039669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell which occurs via retraction of the viral-bound pilus to bring the virus in contact with the host cell membrane, followed by fusion of the bacteriophage membrane with the host outer membrane.","definition_xrefs":["GOC:bf","GOC:jl","PMID:20427561","VZ:981"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction and membrane fusion (obsolete GO:0039669)","termid":"GO:0039669"}


id: PBO:0030222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_guanosine-diphosphatase_activity","termid":"PBO:0030222"}


id: GO:2000433
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90584,86201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokinesis","termid":"GO:0032467"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"positively_regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"positive regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000433","terms_by_termid":{"GO:1903501":null}}


id: GO:0034955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxydiphenyl ether + O2 + H2O = 2-hydroxymuconate + phenol.","definition_xrefs":["UM-BBD_reactionID:r1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxydiphenyl ether dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034955"}


id: PBO:0062835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 1","termid":"PBO:0062835"}


id: GO:0015850
data:
  {"annotated_genes":["SJAG_01590","SJAG_00355","SJAG_00671","SJAG_02323","SJAG_03595","SJAG_03808","SJAG_03718","SJAG_02152","SJAG_02962","SJAG_01407","SJAG_01329","SJAG_01722","SJAG_03652","SJAG_04506","SJAG_00261","SJAG_02375"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[97631,102480,97823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[84635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[94219,88749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[86341,86342,114855,113594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[86343,113595,114856,86344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[86346,114857,113596,86345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[90420,98767,104373,112375,105537,107491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_00671":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02152":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02962":null,"SJAG_03595":null,"SJAG_03652":null,"SJAG_03718":null,"SJAG_03808":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organic hydroxy compound transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organic alcohol transport","type":"exact"}],"termid":"GO:0015850","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904679":null,"GO:1990556":null}}


id: PBO:0039946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 5A","termid":"PBO:0039946"}


id: PR:O94602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.15c","synonyms":[{"name":"Spom972h-SPCC622.15c","type":"exact"}],"termid":"PR:O94602"}


id: PBO:0084497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein of unknown function; required for spore wall formation during sporulation and for timely prospore membrane closure along with SPS1; required with Sps1p for phosphorylation and turnover of Ssp1p; dispensable for both nuclear divisions during meiosis","termid":"PBO:0084497"}


id: GO:1905404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"positively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905404"}


id: PBO:0086839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein tyrosine phosphatase; required for cell cycle arrest in response to oxidative damage of DNA","termid":"PBO:0086839"}


id: PATO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased size quality inhering in a bearer by virtue of the bearer's exhibiting enlargement of a cell or constituent group of cells (for example, organ).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic","synonyms":[{"name":"hypertrophy","type":"narrow"}],"termid":"PATO:0000584"}


id: PBO:0004045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export receptor, Tap, nucleoporin Mex67","termid":"PBO:0004045"}


id: PBO:0087772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome complex; complex is involved in production of 18S rRNA and assembly of small ribosomal subunit; Utp30p is peripherally associated with 90S preribosome and appears partially redundant with its paralog Cic1p","termid":"PBO:0087772"}


id: PBO:0048764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMDS divergent transcript","termid":"PBO:0048764"}


id: GO:0050186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + H2O = adenosine 3',5'-bisphosphate + sulfate.","definition_xrefs":["EC:3.6.2.2","MetaCyc:PHOSPHOADENYLYLSULFATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides","termid":"GO:0016819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphoadenylylsulfatase activity","secondary_identifiers":["RHEA:11232"],"synonyms":[{"name":"3'-phosphoadenylylsulfate sulfohydrolase activity","type":"related"},{"name":"3-phosphoadenosine 5-phosphosulfate sulfatase activity","type":"related"},{"name":"3-phosphoadenylyl sulfatase activity","type":"related"},{"name":"PAPS sulfatase activity","type":"related"},{"name":"phosphoadenylylsulphatase activity","type":"exact"}],"termid":"GO:0050186"}


id: PBO:0068197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 504","termid":"PBO:0068197"}


id: GO:0032901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotrophin production","synonyms":[{"name":"activation of neurotrophin production","type":"narrow"},{"name":"stimulation of neurotrophin production","type":"narrow"},{"name":"up regulation of neurotrophin production","type":"exact"},{"name":"up-regulation of neurotrophin production","type":"exact"},{"name":"upregulation of neurotrophin production","type":"exact"}],"termid":"GO:0032901"}


id: GO:0036457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic, non-membrane bound granule of, at least, keratinocyte. Associated to keratin intermediate filaments and partially crosslinked to the cell envelope.","definition_xrefs":["PMID:15854042","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"keratohyalin granule","termid":"GO:0036457"}


id: PBO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cadmium","termid":"PBO:0030380"}


id: PBO:0046747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 2","termid":"PBO:0046747"}


id: PBO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-34 (pseudogene)","termid":"PBO:0051366"}


id: PBO:0011120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A regulator, PTPA family Ypa1","termid":"PBO:0011120"}


id: PR:Q09779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21597:SF0","OMA:SCHPO00263","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.14","secondary_identifiers":["UniProtKB:Q09779"],"synonyms":[{"name":"Spom972h-THOC2","type":"exact"}],"termid":"PR:Q09779"}


id: GO:0004663
data:
  {"annotated_genes":["SJAG_04923","SJAG_03810","SJAG_04434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85727,97556,111105],"is_not":false,"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family.","definition_xrefs":["EC:2.5.1.60","PMID:8621375","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein geranylgeranyltransferase activity","termid":"GO:0004661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0140096","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"Rab geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-19996","MetaCyc:RXN-19995","MetaCyc:RXN-19997"],"synonyms":[{"name":"GGTase-II activity","type":"exact"},{"name":"GGTaseII activity","type":"exact"},{"name":"Rab-protein geranylgeranyltransferase activity","type":"exact"},{"name":"RabGGTase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate,geranylgeranyl-diphosphate:protein-cysteine geranyltransferase activity","type":"exact"},{"name":"protein geranylgeranyltransferase type II activity","type":"exact"},{"name":"type II protein geranyl-geranyltransferase activity","type":"related"}],"termid":"GO:0004663","terms_by_termid":{"GO:0004663":null}}


id: PBO:0067108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 150, pseudogene","termid":"PBO:0067108"}


id: GO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with the ends of intermediate filaments and couple the intermediate filaments to the plasma membrane.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type III intermediate filament associated protein (obsolete GO:0001724)","synonyms":[{"name":"type III intermediate filament associated protein","type":"exact"}],"termid":"GO:0001724"}


id: SO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A germline immunoglobulin gene.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene","termid":"SO:0002121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin_gene","synonyms":[{"name":"All_IG_genes","type":"exact"},{"name":"IG_genes","type":"exact"}],"termid":"SO:0002122"}


id: PBO:0027392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027392"}


id: PR:O43001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.02","synonyms":[{"name":"Spom972h-syj1","type":"exact"},{"name":"synaptojanin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43001"}


id: PBO:0067188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 250, pseudogene","termid":"PBO:0067188"}


id: GO:0019474
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0008150","GO:0044248","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-lysine breakdown to acetyl-CoA","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA","type":"exact"}],"termid":"GO:0019474","terms_by_termid":{"GO:0033512":null}}


id: PBO:0029338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_phosphorylation","termid":"PBO:0029338"}


id: PBO:0085194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine decarboxylase; catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; deletion decreases lifespan, and increases necrotic cell death and ROS generation","termid":"PBO:0085194"}


id: PBO:0017870
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RanBP1","termid":"PBO:0017870"}


id: GO:0016679
data:
  {"annotated_genes":["SJAG_00601","SJAG_01490","SJAG_02646","SJAG_07006","SJAG_00755","SJAG_03490","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114268,104126,115156,100644,100238,113805,109570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.10.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"narrow"}],"termid":"GO:0016679","terms_by_termid":{"GO:0008121":null}}


id: PBO:0077285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 30A","termid":"PBO:0077285"}


id: GO:0140777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex, thus preventing an interaction with a factor that would promote dissociation of the complex.","definition_xrefs":["PMID:34040253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex stabilizing activity","termid":"GO:0140777"}


id: GO:0140224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:22973053","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SLAC complex","termid":"GO:0140224"}


id: FYPO:0005626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light during S phase of the mitotic cell cycle. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","termid":"FYPO:0005299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint response after UV irradiation during S phase","type":"exact"}],"termid":"FYPO:0005626"}


id: SO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region composed of 8-11bp which enables binding by the centromere binding factor 1(Cbf1p).","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_I","synonyms":[{"name":"CDEI","type":"exact"},{"name":"Centromere DNA Element I","type":"exact"}],"termid":"SO:0001493"}


id: PBO:0079077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-5","termid":"PBO:0079077"}


id: GO:0110128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unloading sucrose that is produced in the source tissues, from the sieve tube or companion cell of the phloem into the sink tissues.","definition_xrefs":["PMID:30018170","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transport","termid":"GO:0015770"},{"relation_name":"is_a","term_name":"phloem unloading","termid":"GO:0110127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phloem sucrose unloading","termid":"GO:0110128"}


id: PBO:0087386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol transporter that transfers sterols between membranes; may regulate and coordinate formation of contact sites between organelles; localizes to ER-mitochondrial contact sites in a Tom70p- and Tom71p-dependent manner; mitochondrial localization requires GRAM domain; also localizes to ER-vacuole contact sites, in a Vac8p-dependent manner; has GRAM and StART-like (VASt) domains; one of six StART-like domain-containing proteins in yeast; conserved across eukaryotes","termid":"PBO:0087386"}


id: GO:0070216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an isoform of the MDM4 protein, a negative regulator of p53.","definition_xrefs":["GOC:mah","GOC:nln"],"gene_count":0,"genotype_count":0,"name":"obsolete MDM4 binding (obsolete GO:0070216)","synonyms":[{"name":"MDM4 binding","type":"exact"},{"name":"MDMX binding","type":"exact"}],"termid":"GO:0070216"}


id: GO:0050079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate = propynoate + H2O.","definition_xrefs":["EC:4.2.1.27","MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDRATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"acetylenecarboxylate hydratase activity, producing 3-oxopropanoate","secondary_identifiers":["RHEA:17957","GO:0047607"],"synonyms":[{"name":"3-oxopropanoate hydro-lyase (propynoate-forming)","type":"related"},{"name":"3-oxopropanoate hydro-lyase activity","type":"related"},{"name":"acetylenecarboxylate hydratase activity","type":"broad"},{"name":"acetylenecarboxylate hydratase activity, producing malonate-semialdehyde","type":"exact"},{"name":"acetylenemonocarboxylate hydrase activity","type":"related"},{"name":"acetylenemonocarboxylate hydratase activity","type":"broad"},{"name":"acetylmonocarboxylic acid hydrase activity","type":"related"},{"name":"alkynoate hydratase activity","type":"broad"},{"name":"malonate-semialdehyde dehydratase activity","type":"exact"}],"termid":"GO:0050079"}


id: PBO:0052533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 6","termid":"PBO:0052533"}


id: PATO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000164 relative temporal (obsolete PATO:0000164)","termid":"PATO:0000164"}


id: PBO:0083199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene MMS4","termid":"PBO:0083199"}


id: PR:Q9P6M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug99 gene.","definition_xrefs":["UniProtKB:Q9P6M7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 99 protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.04","synonyms":[{"name":"Spom972h-mug99","type":"exact"}],"termid":"PR:Q9P6M7"}


id: PBO:0078057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 47","termid":"PBO:0078057"}


id: GO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near symbiont (obsolete GO:0052194)","termid":"GO:0052194"}


id: GO:0039594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any endoribonuclease activity that contributes to the viral-induced catabolism of host mRNA.","definition_xrefs":["PMID:22046136","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0140098","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"endoribonuclease activity involved in viral induction of host mRNA catabolic process","termid":"GO:0039594"}


id: PBO:0089700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prevacuole/endosomal FYVE tethering component Pep7","termid":"PBO:0089700"}


id: GO:0085006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via a symbiont-containing vacuole, a specialized sac within the host in which the symbiont resides. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from symbiont-containing vacuole (obsolete GO:0085006)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from parasitophorous vacuole","type":"exact"}],"termid":"GO:0085006"}


id: PBO:0058346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4719","termid":"PBO:0058346"}


id: PBO:0079281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTL family tubulin polyglutamylase complex subunit L1","termid":"PBO:0079281"}


id: PBO:0045893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 5","termid":"PBO:0045893"}


id: GO:0003819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete major histocompatibility complex antigen (obsolete GO:0003819)","synonyms":[{"name":"MHC protein","type":"exact"},{"name":"major histocompatibility complex antigen","type":"exact"}],"termid":"GO:0003819"}


id: PBO:0057836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3152","termid":"PBO:0057836"}


id: GO:1904672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA","PMID:19409607","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"}


id: PBO:0054520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1920","termid":"PBO:0054520"}


id: PBO:0027774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_viridicatumtoxin","termid":"PBO:0027774"}


id: PBO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Cti6","termid":"PBO:0003221"}


id: SO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequencer read which is part of a contig.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contig_read","synonyms":[{"name":"contig read","type":"exact"}],"termid":"SO:0000476"}


id: PATO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types of a specific lineage and lack self renewing capacity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligopotent","termid":"PATO:0001401"}


id: PBO:0086642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNR021W is not an essential gene","termid":"PBO:0086642"}


id: PBO:0052900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-11","termid":"PBO:0052900"}


id: PBO:0082152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adapter protein for pexophagy and the Cvt targeting pathway; directs receptor-bound cargo to the phagophore assembly site (PAS) for packaging into vesicles; required for recruiting other proteins to the PAS; recruits Dnm1p to facilitate fission of mitochondria that are destined for removal by mitophagy","termid":"PBO:0082152"}


id: FYPO:0008145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of  heme O measured in a cell is lower than normal.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of heme O in cell","synonyms":[{"name":"decreased heme O level","type":"exact"}],"termid":"FYPO:0008145"}


id: PBO:0026865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_mitotic_S_phase","termid":"PBO:0026865"}


id: PBO:0060602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit G pseudogene 2","termid":"PBO:0060602"}


id: GO:0045254
data:
  {"annotated_genes":["SJAG_01402","SJAG_03290","SJAG_00866","SJAG_03064","SJAG_02006","SJAG_02158"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83651,91175,95190,104759,110394,114566],"is_not":false,"summary":null,"term":"GO:0045254"}]},"cv_name":"cellular_component","definition":"A multi-enzyme complex that catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA. The complex comprises multiple copies of three enzymes referred to as E1, E2 and E3: pyruvate dehydrogenase (E1, which may be a homodimer or a heterotetramer of two alpha and two beta subunits, depending on species), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Additional proteins may also be present.","definition_xrefs":["PMID:36863425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoacid dehydrogenase complex","termid":"GO:0045240"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_03064":null,"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyruvate dehydrogenase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0009364","Wikipedia:Pyruvate_dehydrogenase_complex"],"synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"exact"}],"termid":"GO:0045254","terms_by_termid":{"GO:0045254":null}}


id: GO:2001250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ammonia assimilation cycle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nitrogen utilization","termid":"GO:0045848"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"is_a","term_name":"regulation of ammonia assimilation cycle","termid":"GO:2001248"},{"relation_name":"positively_regulates","term_name":"ammonia assimilation cycle","termid":"GO:0019676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ammonia assimilation cycle","synonyms":[{"name":"positive regulation of glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"positive regulation of glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:2001250"}


id: GO:0035396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-X-C motif) ligand 9.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035394"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"positive regulation of CXCL9 production","type":"exact"},{"name":"positive regulation of MIG production","type":"exact"}],"termid":"GO:0035396"}


id: PBO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 2","termid":"PBO:0071396"}


id: PR:Q10337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- brc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.05c","synonyms":[{"name":"Spom972h-brc1","type":"exact"}],"termid":"PR:Q10337"}


id: PBO:0087781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087781"}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: FYPO:0001446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular trehalose level","synonyms":[{"name":"abnormal cellular trehalose accumulation","type":"related"},{"name":"abnormal cellular trehalose level","type":"exact"}],"termid":"FYPO:0001446"}


id: PBO:0041235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 74","termid":"PBO:0041235"}


id: MOD:00425
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom with a hydroxyl group.","definition_xrefs":["Unimod:35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated residue","synonyms":[{"name":"Hy1Res","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"Oxidation or Hydroxylation","type":"related"}],"termid":"MOD:00425"}


id: PBO:0005807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Brl1","termid":"PBO:0005807"}


id: PBO:0027667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing","termid":"PBO:0027667"}


id: PATO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mating type that indicates whether the F plasmid has integrated into the chromosome.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial mating type","termid":"PATO:0001335"}


id: GO:1990475
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that repopulate vacancies within the readily releasable pool (RRP) of synaptic vesicles, and require more significant stimuli than the RRP in order to release neurotransmitter; about 10-15% of the total number of synaptic vesicles at a resting terminal bouton are in this state.","definition_xrefs":["PMID:22745285","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle, recycling pool","synonyms":[{"name":"recycling pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990475"}


id: PBO:0088240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght2","termid":"PBO:0088240"}


id: PBO:0003366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1-like protein Git7","termid":"PBO:0003366"}


id: PBO:0043644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5 pseudogene 1","termid":"PBO:0043644"}


id: FYPO:0006742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc.","definition_xrefs":["PomBase:mah","PMID:30134042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000294","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal transcription from MCB promoter","synonyms":[{"name":"normal expression of MBF target genes","type":"related"},{"name":"normal transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"normal transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0006742"}


id: PBO:0074667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 53","termid":"PBO:0074667"}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: PBO:0080891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH domain family member 1 pseudogene 1","termid":"PBO:0080891"}


id: GO:0019747
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107534,111621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving isoprenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of isoprenoid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of isoprenoid metabolism","type":"exact"}],"termid":"GO:0019747","terms_by_termid":{"GO:2001211":null}}


id: PBO:0028219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_during_cellular_response_to_salt_stress","termid":"PBO:0028219"}


id: GO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a NK T cell.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:10704459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell differentiation","synonyms":[{"name":"NK T cell development","type":"related"},{"name":"NK T lymphocyte differentiation","type":"exact"},{"name":"NK T-cell differentiation","type":"exact"},{"name":"NK T-lymphocyte differentiation","type":"exact"},{"name":"NKT cell differentiation","type":"exact"},{"name":"NT cell differentiation","type":"exact"},{"name":"natural T cell differentiation","type":"exact"},{"name":"natural killer T cell differentiation","type":"exact"}],"termid":"GO:0001865"}


id: GO:1902239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator.","definition_xrefs":["PMID:16571598","GOC:mtg_apoptosis","GOC:TermGenie","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902219"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1902238"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"narrow"}],"termid":"GO:1902239"}


id: GO:0021561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the facial nerve over time, from its formation to the mature structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives off nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve development","synonyms":[{"name":"CN VII development","type":"related"},{"name":"cranial nerve 7 development","type":"exact"},{"name":"cranial nerve VII development","type":"exact"}],"termid":"GO:0021561"}


id: PBO:0030861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_medial_cortex","termid":"PBO:0030861"}


id: PATO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001111 relative density value (obsolete PATO:0001111)","termid":"PATO:0001111"}


id: GO:1903969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:nc","PMID:19100238","GOC:TermGenie","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"regulation of response to M-CSF","type":"exact"},{"name":"regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903969"}


id: PBO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 1","termid":"PBO:0052076"}


id: PBO:0084944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in spore wall assembly; sequence similarity to DTR1 and QDR3, and the triple mutant dtr1 qdr1 qdr3 exhibits reduced dityrosine fluorescence relative to the single mutants; required for resistance to quinidine, ketoconazole, fluconazole, and barban; QDR1 has a paralog, AQR1, that arose from the whole genome duplication","termid":"PBO:0084944"}


id: GO:0030419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.","definition_xrefs":["GOC:mah","PMID:10069850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"nicotianamine metabolic process","termid":"GO:0030417"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"nicotianamine catabolic process","synonyms":[{"name":"nicotianamine breakdown","type":"exact"},{"name":"nicotianamine catabolism","type":"exact"},{"name":"nicotianamine degradation","type":"exact"}],"termid":"GO:0030419"}


id: PR:Q9P7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gad8 gene.","definition_xrefs":["UniProtKB:Q9P7J8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom972h-gad8","type":"exact"}],"termid":"PR:Q9P7J8"}


id: PBO:0073228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 1","termid":"PBO:0073228"}


id: FYPO:0001612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular arginine level","termid":"FYPO:0001621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased vacuolar arginine level","synonyms":[{"name":"decreased level of arginine in vacuole","type":"exact"},{"name":"decreased vacuolar L-arginine level","type":"exact"},{"name":"decreased vacuolar arginine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar arginine level during vegetative growth","type":"exact"},{"name":"reduced level of arginine in vacuole","type":"exact"},{"name":"reduced vacuolar arginine level","type":"exact"}],"termid":"FYPO:0001612"}


id: GO:0099102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any G-protein gated potassium channel activity that is involved regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos","PMID:9429760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G-protein gated potassium channel activity","termid":"GO:0099101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"G-protein gated potassium channel activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099102"}


id: FYPO:0008047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is decreased at the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation  at centromere during meiosis","termid":"FYPO:0008047"}


id: PBO:0062449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 116 pseudogene","termid":"PBO:0062449"}


id: PBO:0068925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 168, pseudogene","termid":"PBO:0068925"}


id: GO:1903421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GOC:pad","PMID:22745285","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of synaptic vesicle recycling","synonyms":[{"name":"regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903421"}


id: GO:1990890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a netrin receptor.","definition_xrefs":["GOC:kmv","PMID:8861902","PMID:9126742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"netrin receptor binding","termid":"GO:1990890"}


id: PR:O59785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized solute carrier family 35 member C320.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.08","synonyms":[{"name":"Spom972h-SPCC320.08","type":"exact"}],"termid":"PR:O59785"}


id: PBO:0038835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 1","termid":"PBO:0038835"}


id: PBO:0079019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 2-1","termid":"PBO:0079019"}


id: FYPO:0005027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, has a larger diameter and volume than normal, contains two nuclei and more than one septum, and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, swollen binucleate cell with central constriction","termid":"FYPO:0002987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000005","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, swollen binucleate multiseptate cell with central constriction","synonyms":[{"name":"inviable after spore germination, binucleate without cell division, swollen with multiple septa","type":"exact"},{"name":"inviable after spore germination, undivided swollen binucleate multiseptate cell with central constriction","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate multiseptate cell with central constriction, with nuclear division without cytokinesis","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate multiseptate cell with constricted region at cell division site","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen dumbbell-shaped binucleate multiseptate cell","type":"related"},{"name":"inviable following spore germination, without cell division, swollen binucleate multiseptate cell with central constriction","type":"exact"},{"name":"inviable germinated spore, without cell division, swollen binucleate multiseptate cell with central constriction","type":"exact"},{"name":"lethal after spore germination, without cell division, swollen binucleate multiseptate cell with central constriction","type":"exact"}],"termid":"FYPO:0005027"}


id: GO:0042419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["ISBN:0192801023","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine metabolic process","termid":"GO:0042414"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine catabolic process","synonyms":[{"name":"adrenaline catabolic process","type":"exact"},{"name":"adrenaline catabolism","type":"exact"},{"name":"epinephrine breakdown","type":"exact"},{"name":"epinephrine catabolism","type":"exact"},{"name":"epinephrine degradation","type":"exact"}],"termid":"GO:0042419"}


id: GO:1900510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pentose catabolic process to ethanol (obsolete GO:1900510)","synonyms":[{"name":"down regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"down regulation of pentose catabolism to ethanol","type":"exact"},{"name":"down-regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"down-regulation of pentose catabolism to ethanol","type":"exact"},{"name":"downregulation of pentose catabolic process to ethanol","type":"exact"},{"name":"downregulation of pentose catabolism to ethanol","type":"exact"},{"name":"inhibition of pentose catabolic process to ethanol","type":"narrow"},{"name":"inhibition of pentose catabolism to ethanol","type":"exact"},{"name":"negative regulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900510"}


id: GO:0106385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a dIMP from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:8692979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dIMP salvage","termid":"GO:0106385"}


id: GO:0033381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the protease granzyme B to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protease localization to T cell secretory granule","termid":"GO:0033378"},{"relation_name":"part_of","term_name":"granzyme B localization to T cell secretory granule","termid":"GO:0033380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"establishment of granzyme B localization to T cell secretory granule","synonyms":[{"name":"T-lymphocyte secretory granule storage of granzyme B","type":"related"},{"name":"establishment of granzyme B localisation in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033381"}


id: SO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby the process of editing is disrupted with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_processing_variant","termid":"SO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_variant","synonyms":[{"name":"editing variant","type":"exact"}],"termid":"SO:0001544"}


id: PBO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase (predicted)","termid":"PBO:0002234"}


id: GO:0005810
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endocytotic transport vesicle (obsolete GO:0005810)","synonyms":[{"name":"endocytotic transport vesicle","type":"exact"}],"termid":"GO:0005810"}


id: PBO:0081602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 526","termid":"PBO:0081602"}


id: PBO:0045041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 1","termid":"PBO:0045041"}


id: GO:0006254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CTP, cytidine 5'-triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate catabolic process","termid":"GO:0009210"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CTP metabolic process","termid":"GO:0046036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CTP catabolic process","synonyms":[{"name":"CTP breakdown","type":"exact"},{"name":"CTP catabolism","type":"exact"},{"name":"CTP degradation","type":"exact"},{"name":"CTP hydrolysis","type":"exact"}],"termid":"GO:0006254"}


id: PBO:0076996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 10","termid":"PBO:0076996"}


id: PBO:0051976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 3","termid":"PBO:0051976"}


id: FYPO:0003502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing raffinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on raffinose carbon source","termid":"FYPO:0001162"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on raffinose carbon source","synonyms":[{"name":"abolished growth on raffinose carbon source","type":"broad"},{"name":"abolished raffinose utilization","type":"related"},{"name":"abolished vegetative cell population growth on raffinose carbon source","type":"exact"},{"name":"cell population growth on raffinose carbon source abolished","type":"exact"}],"termid":"FYPO:0003502"}


id: PATO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000530 soil nutrient sensitivity value (obsolete PATO:0000530)","termid":"PATO:0000530"}


id: PBO:0042428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 34, ubiqiutin conjugating enzyme","termid":"PBO:0042428"}


id: PBO:0070779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 9","termid":"PBO:0070779"}


id: PBO:0108567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo-type fold protein, human IFRD1 ortholog, implicated in transcription or signaling","termid":"PBO:0108567"}


id: GO:0016827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-phosphorus bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-phosphorus bonds","secondary_identifiers":["EC:3.11.-.-"],"termid":"GO:0016827"}


id: GO:0002819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune response","termid":"GO:0002819"}


id: PBO:0066426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats pseudogene 1 Y-linked","termid":"PBO:0066426"}


id: PR:O74537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC74.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C74.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.04","synonyms":[{"name":"Spom972h-SPCC74.04","type":"exact"}],"termid":"PR:O74537"}


id: GO:0050078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonate = acetate + malonyl-CoA.","definition_xrefs":["RHEA:18817","EC:2.8.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"malonate CoA-transferase activity","secondary_identifiers":["KEGG_REACTION:R00743","MetaCyc:MALONATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:malonate CoA-transferase activity","type":"related"},{"name":"malonate coenzyme A-transferase activity","type":"related"}],"termid":"GO:0050078"}


id: PR:O42910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.03c","synonyms":[{"name":"Spom972h-ppr7","type":"exact"}],"termid":"PR:O42910"}


id: FYPO:0003063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}


id: GO:1990071
data:
  {"annotated_genes":["SJAG_02525","SJAG_04837","SJAG_01415","SJAG_04618","SJAG_04021","SJAG_02750","SJAG_03467","SJAG_04358","SJAG_02655","SJAG_03663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84882,85551,93483,95267,95909,98684,99534,101042,105995,112575],"is_not":false,"summary":null,"term":"GO:1990071"}]},"cv_name":"cellular_component","definition":"A complex that mediates intra-Golgi traffic, Golgi exit, endosome-to-Golgi traffic, and the trafficking of autophagy proteins from Golgi to the phagophore assembly site. Binds to a component of the COPI coat. In yeast it includes the following subunits: Bet3 (as homodimer), Bet5, Tca17, Trs20, Trs23, Trs31, Trs33, Trs65, Trs120, Trs130. The whole complex is thought to dimerize with itself.","definition_xrefs":["GOC:bhm","PMID:20375281","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005768","GO:0032991","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"TRAPPII protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990071","terms_by_termid":{"GO:1990071":null}}


id: PBO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective entrance Into Mitosis","termid":"PBO:0018148"}


id: PR:Q09920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fio1 gene.","definition_xrefs":["UniProtKB:Q09920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron transport multicopper oxidase fio1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.08","synonyms":[{"name":"Spom972h-fio1","type":"exact"}],"termid":"PR:Q09920"}


id: FYPO:0005834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport to the cortex of the cell tip, driven by polymerization of a microtubule to which the protein is attached, is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah","GO:0099110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip cortex during vegetative growth","termid":"FYPO:0005832"},{"relation_name":"is_a","term_name":"decreased protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein transport along microtubule to cell tip cortex during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0005834"}


id: PBO:0041510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 132","termid":"PBO:0041510"}


id: GO:0042791
data:
  {"annotated_genes":["SJAG_02815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105303],"is_not":false,"summary":null,"term":"GO:0042791"}]},"cv_name":"biological_process","definition":"The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template by RNA polymerase III (Pol III), originating at a type 1 RNA polymerase III promoter.","definition_xrefs":["PMID:12381659","GOC:txnOH","GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"5S class rRNA transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5S class rRNA transcription from RNA polymerase III type 1 promoter","type":"related"},{"name":"5S rRNA transcription","type":"exact"}],"termid":"GO:0042791","terms_by_termid":{"GO:0042791":null}}


id: PBO:0086203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; sumoylated under stress conditions in a genome wide study; YDR336W is not an essential gene","termid":"PBO:0086203"}


