# terms

id: MOD:00537
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to L-alanine.","definition_xrefs":["Unimod:659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine residue","termid":"MOD:00010"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine residue (Thr)","synonyms":[{"name":"Thr(Ala)","type":"exact"},{"name":"Thr->Ala","type":"related"},{"name":"Thr->Ala substitution","type":"related"}],"termid":"MOD:00537"}


id: GO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling phenylalanine to phenylalanyl-tRNA in a mitochondrion, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylalanyl-tRNA aminoacylation","termid":"GO:0006432"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA aminoacylation","termid":"GO:0070156"}


id: PBO:0057146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR223 host gene","termid":"PBO:0057146"}


id: PBO:0077033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC1 divergent transcript","termid":"PBO:0077033"}


id: PBO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K12_acetylation_at_subtelomere","termid":"PBO:0032723"}


id: FYPO_EXT:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"intermediate fraction of cells (penetrance) or moderate phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium","termid":"FYPO_EXT:0000002"}


id: PBO:0047211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member B","termid":"PBO:0047211"}


id: PBO:0109355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and heme transporter 1","termid":"PBO:0109355"}


id: PBO:0065887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB35, member RAS oncogene family","termid":"PBO:0065887"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: GO:1905746
data:
  {"annotated_genes":["SJAG_01040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114522],"is_not":false,"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["PMID:2880558","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA splicing, via spliceosome","termid":"GO:0048026"},{"relation_name":"is_a","term_name":"regulation of mRNA cis splicing, via spliceosome","termid":"GO:1905744"},{"relation_name":"positively_regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01040":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905746","terms_by_termid":{"GO:1905746":null}}


id: PBO:0006179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulator","termid":"PBO:0006179"}


id: PBO:0080873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YME1L1 pseudogene 1","termid":"PBO:0080873"}


id: PR:Q9HGQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C212.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.02","synonyms":[{"name":"Spom972h-SPAC212.02","type":"exact"}],"termid":"PR:Q9HGQ0"}


id: PBO:0041615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 1","termid":"PBO:0041615"}


id: PBO:0086961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of septin dynamics; involved in the regulation of septin dynamics at bud neck after mitotic entry, likely by stabilizing septin structure; regulated at post-translational level by cell cycle dependent phosphorylation; likely phosphorylated by Cdc28p and dephosphorylated by Cdc14p before cytokinesis; high-copy suppressor of synthetic lethality of sis2 sit4 double mutant; VHS2 has a paralog, MLF3, that arose from the whole genome duplication","termid":"PBO:0086961"}


id: PBO:0000976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase chaperone Atp11 (predicted)","termid":"PBO:0000976"}


id: GO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid cell differentiation","termid":"GO:0045637"}


id: PBO:0064866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26","termid":"PBO:0064866"}


id: FYPO:0006193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mating projection is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal shmoo formation","termid":"FYPO:0000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal shmoo morphology","synonyms":[{"name":"normal conjugation tube morphology","type":"exact"},{"name":"normal mating projection morphology","type":"exact"}],"termid":"FYPO:0006193"}


id: PBO:0075675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT2 chromatin protein domain containing 1","termid":"PBO:0075675"}


id: GO:0102838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.23","MetaCyc:RXN-8298"],"termid":"GO:0102838"}


id: PBO:0039154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 1","termid":"PBO:0039154"}


id: PBO:0057914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3617","termid":"PBO:0057914"}


id: PBO:0079017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruB pseudouridine synthase family member 2","termid":"PBO:0079017"}


id: GO:0047429
data:
  {"annotated_genes":["SJAG_01651","SJAG_03676","SJAG_04487","SJAG_00705","SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108005,110135],"is_not":false,"summary":null,"term":"GO:0047429"},{"annotations":[95151,114713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035870"},{"annotations":[93279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036218"},{"annotations":[95152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004170"},{"annotations":[114714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036220"},{"annotations":[93280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036221"},{"annotations":[114715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside triphosphate + H2O = a nucleotide + H+ + diphosphate.","definition_xrefs":["EC:3.6.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00705":null,"SJAG_01651":null,"SJAG_03676":null,"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nucleoside triphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9755030","MetaCyc:NUCLEOTIDE-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"nucleoside-triphosphate diphosphatase activity","type":"exact"},{"name":"nucleoside-triphosphate diphosphohydrolase activity","type":"exact"},{"name":"nucleoside-triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0047429","terms_by_termid":{"GO:0004170":null,"GO:0035870":null,"GO:0036218":null,"GO:0036220":null,"GO:0036221":null,"GO:0036222":null,"GO:0047429":null}}


id: GO:0043323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of natural killer cell degranulation","termid":"GO:0043321"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of natural killer cell degranulation","synonyms":[{"name":"activation of natural killer cell degranulation","type":"narrow"},{"name":"positive regulation of NK cell degranulation","type":"exact"},{"name":"positive regulation of NK cell granule exocytosis","type":"exact"},{"name":"positive regulation of natural killer cell granule exocytosis","type":"exact"},{"name":"stimulation of natural killer cell degranulation","type":"narrow"},{"name":"up regulation of natural killer cell degranulation","type":"exact"},{"name":"up-regulation of natural killer cell degranulation","type":"exact"},{"name":"upregulation of natural killer cell degranulation","type":"exact"}],"termid":"GO:0043323"}


id: PBO:0056090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g1","termid":"PBO:0056090"}


id: GO:0000301
data:
  {"annotated_genes":["SJAG_00041","SJAG_00332","SJAG_00578","SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85175,87331,105673,112982],"is_not":false,"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The retrograde movement of substances within the Golgi, mediated by COP I vesicles. Cis-Golgi vesicles are constantly moving forward through the Golgi stack by cisternal progression, eventually becoming trans-Golgi vesicles. They then selectively transport membrane and luminal proteins from the trans- to the medial-Golgi while leaving others behind in the trans-Golgi cisternae; similarly, they selectively move proteins from the medial- to the cis-Golgi.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retrograde transport, vesicle recycling within Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"retrograde (vesicle recycling within Golgi) transport","type":"exact"}],"termid":"GO:0000301","terms_by_termid":{"GO:0000301":null}}


id: PBO:0066375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 2","termid":"PBO:0066375"}


id: PBO:0053142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6D, pseudogene","termid":"PBO:0053142"}


id: GO:0033239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"negatively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine metabolic process","synonyms":[{"name":"negative regulation of amine metabolism","type":"exact"},{"name":"negative regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033239"}


id: GO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.","direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light reaction","secondary_identifiers":["MetaCyc:PWY-101","Wikipedia:Photolysis#Photolysis_in_photosynthesis"],"synonyms":[{"name":"photolysis","type":"related"}],"termid":"GO:0019684"}


id: GO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.","definition_xrefs":["PMID:26086132","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immunity memory response","termid":"GO:0090714"}


id: PBO:0074828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 24","termid":"PBO:0074828"}


id: PBO:0039950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARIH2 opposite strand lncRNA","termid":"PBO:0039950"}


id: PBO:0079350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tweety family member 3","termid":"PBO:0079350"}


id: PBO:0004752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ste11","termid":"PBO:0004752"}


id: GO:0042656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the phosphorylation and activation of JUN kinase kinase kinases (JNKKKs).","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase kinase kinase activity","termid":"GO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0004672","GO:0016301","GO:0140096"],"is_obsolete":false,"name":"JUN kinase kinase kinase kinase activity","synonyms":[{"name":"JUNKKKK activity","type":"exact"}],"termid":"GO:0042656"}


id: PBO:0088888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic methionine-tRNA ligase Mrs1","termid":"PBO:0088888"}


id: GO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of anterograde axonal transport of mitochondrion","termid":"GO:0061880"},{"relation_name":"negatively_regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"negative regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061882"}


id: FYPO:0004042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms pieces of a septum rather than a septum that completely bisects the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"fragmented septum","synonyms":[{"name":"fragmented septum during mitotic cell cycle","type":"related"},{"name":"fragmented septum during vegetative growth","type":"exact"}],"termid":"FYPO:0004042"}


id: PBO:0056842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056842"}


id: GO:1901574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chemical substance.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance biosynthetic process (obsolete GO:1901574)","synonyms":[{"name":"chemical substance anabolism","type":"exact"},{"name":"chemical substance biosynthesis","type":"exact"},{"name":"chemical substance biosynthetic process","type":"exact"},{"name":"chemical substance formation","type":"exact"},{"name":"chemical substance synthesis","type":"exact"}],"termid":"GO:1901574"}


id: PBO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_direct_regulator_(obsolete_requires_direct_regulator)","termid":"PBO:0034417"}


id: PBO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor (predicted)","termid":"PBO:0018210"}


id: PBO:0052573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KMT5A pseudogene 1","termid":"PBO:0052573"}


id: PBO:0052339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase D interacting substrate 220","termid":"PBO:0052339"}


id: PBO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown HAD superfamily hydrolase","termid":"PBO:0018252"}


id: PBO:0067151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 201, pseudogene","termid":"PBO:0067151"}


id: GO:0072544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-DOPA, the modified amino acid (2S)-2-amino-3-(3,4-dihydroxyphenyl)propanoic acid.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-DOPA binding","termid":"GO:0072544"}


id: PBO:0083631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein; involved in regulating phosphatidylinositol 4,5-bisphosphate levels and autophagy; Irs4p and Tax4p bind and activate the PtdIns phosphatase Inp51p; Irs4p and Tax4p are involved in localizing Atg17p to the PAS; TAX4 has a paralog, IRS4, that arose from the whole genome duplication","termid":"PBO:0083631"}


id: PBO:0064629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome proliferator activated receptor alpha","termid":"PBO:0064629"}


id: PBO:0015262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc1 (predicted)","termid":"PBO:0015262"}


id: PBO:0054945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2359","termid":"PBO:0054945"}


id: GO:0097106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.","definition_xrefs":["PMID:21525273","GOC:sjp","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization organization","termid":"GO:0099084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postsynaptic density organization","synonyms":[{"name":"PSD organization","type":"exact"},{"name":"post synaptic density organization","type":"exact"},{"name":"post-synaptic density organization","type":"exact"},{"name":"postsynaptic density organisation","type":"exact"}],"termid":"GO:0097106"}


id: PBO:0079636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 7","termid":"PBO:0079636"}


id: PBO:0068724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 13, pseudogene","termid":"PBO:0068724"}


id: PBO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2","termid":"PBO:0003691"}


id: CL:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A thick walled spore that stores and protects one or more nuclei following sexual reproduction in an Ascomycete.","definition_xrefs":["GOC:tfm","ISBN:08199377X","SGD:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ascospore","termid":"CL:0000607"}


id: GO:1902072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-inducible factor-1alpha signaling pathway.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:1902071"},{"relation_name":"negatively_regulates","term_name":"hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:0097411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"down regulation of HIF1alpha pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"down-regulation of HIF1alpha pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"downregulation of HIF1alpha pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"inhibition of HIF1alpha pathway","type":"exact"},{"name":"inhibition of hypoxia-inducible factor-1alpha signaling pathway","type":"narrow"},{"name":"inhibition of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"negative regulation of HIF1alpha pathway","type":"exact"},{"name":"negative regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:1902072"}


id: GO:0061765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a non-canonical NF-kappaB signaling cascade in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:BHF","PMID:26764146","GOC:BHF_miRNA","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host non-canonical NF-kappaB signal transduction (obsolete GO:0061765)","synonyms":[{"name":"modulation by virus of host NIK/NF-kappaB cascade","type":"exact"},{"name":"modulation by virus of host NIK/NF-kappaB signaling","type":"exact"},{"name":"perturbation by virus of host NIK/NF-kappaB cascade","type":"exact"}],"termid":"GO:0061765"}


id: GO:0070980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of biphenyl, a toxic aromatic hydrocarbon used as a heat transfer agent, as a fungistat in packaging citrus fruits and in plant disease control. Biphenyl can be chlorinated with 1-10 chlorine molecules to form polychlorinated biphenyls (PCBs).","definition_xrefs":["PMID:16310831","PMID:16339959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biphenyl metabolic process","termid":"GO:0018879"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"biphenyl catabolic process","synonyms":[{"name":"biphenyl breakdown","type":"exact"},{"name":"biphenyl catabolism","type":"exact"},{"name":"biphenyl degradation","type":"exact"}],"termid":"GO:0070980"}


id: PBO:0060465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALF1 intronic transcript 1","termid":"PBO:0060465"}


id: PBO:0110432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WTAP pseudogene 2","termid":"PBO:0110432"}


id: PBO:0051496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobin superfamily member 21","termid":"PBO:0051496"}


id: PBO:0112395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9/Mdm33","termid":"PBO:0112395"}


id: PBO:0058019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3945","termid":"PBO:0058019"}


id: GO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uracil + NADH + O2 + H+ = ureidoacrylate peracid + NAD+. Ureidoacrylate peracid is spontaneously reduced by NADH to form ureidoacrylate.","definition_xrefs":["MetaCyc:RXN0-6444","PMID:20400551","PMID:20369853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"uracil oxygenase activity","secondary_identifiers":["RHEA:31587"],"synonyms":[{"name":"pyrimidine oxygenase activity","type":"broad"}],"termid":"GO:0052614"}


id: FYPO:0006077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at ribosomal DNA.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at rDNA during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006077"}


id: GO:0034174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 12.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 12 signaling pathway","synonyms":[{"name":"TLR12 signaling pathway","type":"exact"},{"name":"toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034174"}


id: GO:0035998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 7,8-dihydroneopterin 3'-triphosphate.","definition_xrefs":["GOC:yaf","UniPathway:UPA00848"],"gene_count":0,"genotype_count":0,"name":"obsolete 7,8-dihydroneopterin 3'-triphosphate biosynthetic process (obsolete GO:0035998)","synonyms":[{"name":"7,8-dihydroneopterin 3'-triphosphate anabolism","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate biosynthesis","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate formation","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate synthesis","type":"exact"}],"termid":"GO:0035998"}


id: PBO:0087838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third-largest subunit of DNA polymerase II (DNA polymerase epsilon); required to maintain fidelity of chromosomal replication and also for inheritance of telomeric silencing; stabilizes the interaction of Pol epsilon with primer-template DNA, positively affecting the processivity of the polymerase and exonuclease activities of Pol epsilon; mRNA abundance peaks at the G1/S boundary of the cell cycle; DPB3 has a paralog, DLS1, that arose from the whole genome duplication","termid":"PBO:0087838"}


id: GO:0072306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072041"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:0072304"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900213"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"positive regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"positive regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072306"}


id: GO:0038076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in innate immune response (obsolete GO:0038076)","synonyms":[{"name":"MAP2K activity involved in innate immune response","type":"exact"},{"name":"MAPKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038076"}


id: PBO:0030575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_isoleucine_level","termid":"PBO:0030575"}


id: PBO:0035904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_glycoprotein_degradation_during_vegetative_growth","termid":"PBO:0035904"}


id: GO:0030168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug.","direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activation","synonyms":[{"name":"blood coagulation, platelet activation","type":"exact"}],"termid":"GO:0030168"}


id: PBO:0014594
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing In the Middle of the centromere","termid":"PBO:0014594"}


id: PR:O74899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C576.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.17c","synonyms":[{"name":"Spom972h-SPCC576.17c","type":"exact"}],"termid":"PR:O74899"}


id: GO:0043610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of carbohydrate utilization.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"carbohydrate utilization","termid":"GO:0009758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of carbohydrate utilization","synonyms":[{"name":"regulation of sugar utilization","type":"narrow"}],"termid":"GO:0043610"}


id: PBO:0060337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 2","termid":"PBO:0060337"}


id: PBO:0031873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 (predicted)","termid":"PBO:0031873"}


id: PBO:0067507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 647, pseudogene","termid":"PBO:0067507"}


id: PBO:0073518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding glutamate rich protein like 3","termid":"PBO:0073518"}


id: PBO:0074677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 61","termid":"PBO:0074677"}


id: PBO:0049566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 2","termid":"PBO:0049566"}


id: PBO:0060109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 10","termid":"PBO:0060109"}


id: GO:0070354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the zinc finger transcription factor GATA2, the LIM domain protein Lmo2 (RBTN2), the basic helix-loop-helix protein TAL1 and its binding partner TCF3. The complex is involved transcriptional regulation in hematopoiesis.","definition_xrefs":["PMID:7568177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GATA2-TAL1-TCF3-Lmo2 complex","termid":"GO:0070354"}


id: GO:0050512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = alpha-D-galactosyl-(1,4)-beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.228-RXN","EC:2.4.1.228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"lactosylceramide 4-alpha-galactosyltransferase activity","secondary_identifiers":["RHEA:11924","Reactome:R-HSA-9846477"],"synonyms":[{"name":"Gal-beta-(1,4)-Glc-beta-1-Cer alpha-(1,4)-galactosyltransferase activity","type":"related"},{"name":"Gal-beta-1,4-Glc-beta-1-Cer alpha-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:lactosylceramide 4II-alpha-D-galactosyltransferase activity","type":"related"},{"name":"globotriaosylceramide/CD77 synthase activity","type":"narrow"},{"name":"histo-blood group P(k) UDP-galactose activity","type":"narrow"},{"name":"histo-blood group Pk UDP-galactose","type":"related"},{"name":"lactosylceramide 4-a-galactosyltransferase activity","type":"exact"}],"termid":"GO:0050512"}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: GO:0000212
data:
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id: GO:1905949
data:
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id: GO:0010907
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of glucose metabolism. Glucose metabolic processes are the chemical reactions and pathways involving glucose, the aldohexose gluco-hexose.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"glucose metabolic process","termid":"GO:0006006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of glucose metabolism","type":"exact"}],"termid":"GO:0010907","terms_by_termid":{"GO:2001172":null}}


id: PBO:0081078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 9","termid":"PBO:0081078"}


id: GO:0072340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactam catabolic process","synonyms":[{"name":"cellular lactam breakdown","type":"exact"},{"name":"cellular lactam catabolic process","type":"exact"},{"name":"cellular lactam catabolism","type":"exact"},{"name":"cellular lactam degradation","type":"exact"}],"termid":"GO:0072340"}


id: GO:1900274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipase C activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipase activity","termid":"GO:0010517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipase C activity","synonyms":[{"name":"regulation of lecithinase C activity","type":"related"},{"name":"regulation of lipophosphodiesterase C","type":"related"},{"name":"regulation of phosphatidase C","type":"related"}],"termid":"GO:1900274"}


id: FYPO:0002737
data:
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id: PBO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 148","termid":"PBO:0042080"}


id: GO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-3 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-5.","definition_xrefs":["PMID:11839579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-3 receptor complex","synonyms":[{"name":"IL-3 receptor complex","type":"exact"}],"termid":"GO:0005894"}


id: PBO:0084940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopper oxidase; integral membrane protein with similarity to Fet3p; may have a role in iron transport","termid":"PBO:0084940"}


id: GO:1901003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fermentation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"negatively_regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of fermentation","synonyms":[{"name":"down regulation of fermentation","type":"exact"},{"name":"down-regulation of fermentation","type":"exact"},{"name":"downregulation of fermentation","type":"exact"},{"name":"inhibition of fermentation","type":"narrow"}],"termid":"GO:1901003"}


id: GO:1905177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a tracheary element.","definition_xrefs":["PMID:20659276","GOC:TermGenie","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheary element differentiation","termid":"GO:1905177"}


id: PBO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein B1","termid":"PBO:0052543"}


id: PBO:0074613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 15B-2","termid":"PBO:0074613"}


id: PR:O14244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C6F6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.13c","synonyms":[{"name":"Spom972h-SPAC6F6.13c","type":"exact"}],"termid":"PR:O14244"}


id: FYECO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a high temperature followed by growth at low temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, high to low","termid":"FYECO:0000294"}


id: PBO:0036038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0036038"}


id: PBO:0069359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 619, pseudogene","termid":"PBO:0069359"}


id: PBO:0060001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 21","termid":"PBO:0060001"}


id: PBO:0053377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 303","termid":"PBO:0053377"}


id: GO:0000228
data:
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id: PBO:0078101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 9","termid":"PBO:0078101"}


id: PBO:0056299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 beta pseudogene 1","termid":"PBO:0056299"}


id: GO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any component or product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:add","ISBN:0781735149","GOC:signaling","GOC:pg","PMID:11884446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement receptor activity","secondary_identifiers":["GO:0004942"],"synonyms":[{"name":"anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004875"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: GO:0051688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a plastid is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of plastid location","synonyms":[{"name":"maintenance of plastid localization","type":"related"}],"termid":"GO:0051688"}


id: GO:0080078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a tricaffeoyl spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity","termid":"GO:0080078"}


id: PBO:0041722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase I","termid":"PBO:0041722"}


id: PBO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C6","termid":"PBO:0045213"}


id: PBO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication_during_azygotic_meiotic_cell_cycle","termid":"PBO:0035971"}


id: PBO:0077468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 187","termid":"PBO:0077468"}


id: PBO:0076815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 2","termid":"PBO:0076815"}


id: GO:0141108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a transporter.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"transporter regulator activity","termid":"GO:0141108"}


id: GO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal.","definition_xrefs":["EC:1.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"retinal dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-5696101","Reactome:R-HSA-5362522","RHEA:16177","MetaCyc:RETINAL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"cytosolic retinal dehydrogenase activity","type":"related"},{"name":"retinal:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0001758"}


id: PBO:0070570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 36","termid":"PBO:0070570"}


id: GO:0097229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.","definition_xrefs":["GOC:cjm","GOC:sart","MP:0009837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm end piece","termid":"GO:0097229"}


id: GO:0034816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthracene + 2 H2O = cis-9,10-dihydroanthracene-9,10-diol.","definition_xrefs":["UM-BBD_reactionID:r1141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"anthracene 9,10-dioxygenase activity","termid":"GO:0034816"}


id: PBO:0043230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 2","termid":"PBO:0043230"}


id: GO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation","synonyms":[{"name":"regulation of T cell development","type":"related"},{"name":"regulation of T lymphocyte differentiation","type":"exact"},{"name":"regulation of T-cell differentiation","type":"exact"},{"name":"regulation of T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045580"}


id: GO:0034945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA + CoASH = 3-isopropylbut-3-enoyl-CoA + propanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA C-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.-"],"termid":"GO:0034945"}


id: GO:0010043
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89947,89948],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to zinc","type":"exact"}],"termid":"GO:0010043","terms_by_termid":{"GO:0010312":null}}


id: PBO:0005278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Spc7","termid":"PBO:0005278"}


id: PBO:0089090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1","termid":"PBO:0089090"}


id: PBO:0064923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 5 catalytic subunit","termid":"PBO:0064923"}


id: PBO:0087741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf5p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087741"}


id: PBO:0053248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX2 antisense RNA 1","termid":"PBO:0053248"}


id: GO:1900806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ergot alkaloid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ergot alkaloid catabolic process (obsolete GO:1900806)","synonyms":[{"name":"ergot alkaloid breakdown","type":"exact"},{"name":"ergot alkaloid catabolism","type":"exact"},{"name":"ergot alkaloid degradation","type":"exact"},{"name":"ergot alkaloids breakdown","type":"related"},{"name":"ergot alkaloids catabolic process","type":"related"},{"name":"ergot alkaloids catabolism","type":"related"},{"name":"ergot alkaloids degradation","type":"related"}],"termid":"GO:1900806"}


id: GO:0075179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075179)","synonyms":[{"name":"negative regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"negative regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075179"}


id: FYPO:0006140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-eicosenoylglycerophosphocholine (20:1n9) measured in a cell is higher than normal.","definition_xrefs":["PMID:28667014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level","synonyms":[{"name":"increased 1-eicosenoylglycerophosphocholine (20:1n9) accumulation","type":"related"},{"name":"increased cellular 1-(11Z)-icosenoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006140"}


id: PBO:0054569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1971","termid":"PBO:0054569"}


id: GO:0043533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inositol 1,3,4,5 tetrakisphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inositol 1,3,4,5 tetrakisphosphate binding","synonyms":[{"name":"IP4 binding","type":"exact"},{"name":"InsP4 binding","type":"exact"}],"termid":"GO:0043533"}


id: PBO:0053032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 5","termid":"PBO:0053032"}


id: GO:0075048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which the cell wall of the symbiont is strengthened or thickened during penetration into the body, tissues, or cells of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall strengthening in symbiont involved in entry into host (obsolete GO:0075048)","synonyms":[{"name":"cell wall strengthening in symbiont during entry into host","type":"related"},{"name":"cell wall thickening in symbiont during entry into host","type":"related"},{"name":"symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075048"}


id: GO:0098033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fiber attached to the neck at the base of some icosahedral viral capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, fiber","termid":"GO:0098022"},{"relation_name":"part_of","term_name":"icosahedral viral capsid, neck","termid":"GO:0098030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, neck fiber","termid":"GO:0098033"}


id: GO:1901098
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93793],"is_not":false,"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagosome maturation.","definition_xrefs":["PMID:21383079","GOC:autophagy","PMID:10436019","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"regulation of autophagosome maturation","termid":"GO:1901096"},{"relation_name":"positively_regulates","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902454"],"synonyms":[{"name":"activation of amphisome-lysosome fusion","type":"narrow"},{"name":"activation of autolysosome formation","type":"narrow"},{"name":"activation of autophagic vacuole fusion","type":"narrow"},{"name":"activation of autophagic vacuole maturation","type":"narrow"},{"name":"activation of autophagosome maturation","type":"exact"},{"name":"activation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"positive regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"positive regulation of autolysosome formation","type":"narrow"},{"name":"positive regulation of autophagic vacuole fusion","type":"exact"},{"name":"positive regulation of autophagosome fusion","type":"exact"},{"name":"positive regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"up regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"up regulation of autolysosome formation","type":"narrow"},{"name":"up regulation of autophagic vacuole fusion","type":"exact"},{"name":"up regulation of autophagic vacuole maturation","type":"exact"},{"name":"up regulation of autophagosome maturation","type":"exact"},{"name":"up regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"up-regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"up-regulation of autolysosome formation","type":"narrow"},{"name":"up-regulation of autophagic vacuole fusion","type":"exact"},{"name":"up-regulation of autophagic vacuole maturation","type":"exact"},{"name":"up-regulation of autophagosome maturation","type":"exact"},{"name":"up-regulation of fusion of autophagosome with lysosome","type":"narrow"},{"name":"upregulation of amphisome-lysosome fusion","type":"narrow"},{"name":"upregulation of autolysosome formation","type":"narrow"},{"name":"upregulation of autophagic vacuole fusion","type":"exact"},{"name":"upregulation of autophagic vacuole maturation","type":"exact"},{"name":"upregulation of autophagosome maturation","type":"exact"},{"name":"upregulation of fusion of autophagosome with lysosome","type":"narrow"}],"termid":"GO:1901098","terms_by_termid":{"GO:1901098":null}}


id: PBO:0055262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2689","termid":"PBO:0055262"}


id: PBO:0016890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family meiotic suppressor protein Ste7","termid":"PBO:0016890"}


id: PBO:0068087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 393","termid":"PBO:0068087"}


id: PBO:0069938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1231, pseudogene","termid":"PBO:0069938"}


id: GO:1900304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"negatively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of laminaritriose transport","synonyms":[{"name":"down regulation of laminaritriose transport","type":"exact"},{"name":"down-regulation of laminaritriose transport","type":"exact"},{"name":"downregulation of laminaritriose transport","type":"exact"},{"name":"inhibition of laminaritriose transport","type":"narrow"}],"termid":"GO:1900304"}


id: PBO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 7","termid":"PBO:0072037"}


id: PBO:0070287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 28","termid":"PBO:0070287"}


id: GO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = alpha-D-glucose 1,6-bisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.10","RHEA:13377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"phosphoglucokinase activity","secondary_identifiers":["KEGG_REACTION:R00949","MetaCyc:PHOSPHOGLUCOKINASE-RXN"],"synonyms":[{"name":"ATP:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"ATP:alpha-D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose-phosphate kinase activity","type":"related"},{"name":"phosphoglucokinase (phosphorylating)","type":"related"}],"termid":"GO:0050190"}


id: PBO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 70","termid":"PBO:0042013"}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: PBO:0079983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 21","termid":"PBO:0079983"}


id: MOD:01862
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the hydrogen atom of a cysteine sulfanyl group with a substituted sulfanyl group, forming a disulfide bond that does not cross-link two encoded peptide chains.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disulfide conjugated residue","synonyms":[{"name":"S-thiolation","type":"exact"}],"termid":"MOD:01862"}


id: PBO:0070972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 10","termid":"PBO:0070972"}


id: PBO:0057054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 139","termid":"PBO:0057054"}


id: GO:0018529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrilotriacetate + NADH + H+ + O2 = NAD+ + H2O + glyoxylate + iminodiacetate.","definition_xrefs":["UM-BBD_reactionID:r0587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitrilotriacetate monooxygenase activity","secondary_identifiers":["EC:1.14.14.10"],"termid":"GO:0018529"}


id: PBO:0004359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere binding protein Rap1","termid":"PBO:0004359"}


id: PBO:0088831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph1","termid":"PBO:0088831"}


id: PBO:0047196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 215 member A","termid":"PBO:0047196"}


id: PBO:0073204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3D","termid":"PBO:0073204"}


id: PBO:0087161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III largest subunit C160; part of core enzyme; similar to bacterial beta-prime subunit and to RPA190 and RPO21","termid":"PBO:0087161"}


id: PBO:0039478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A1","termid":"PBO:0039478"}


id: PR:P22189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.06","synonyms":[{"name":"Spom972h-cta3","type":"exact"}],"termid":"PR:P22189"}


id: GO:2000670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"is_a","term_name":"regulation of dendritic cell apoptotic process","termid":"GO:2000668"},{"relation_name":"positively_regulates","term_name":"dendritic cell apoptotic process","termid":"GO:0097048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell apoptotic process","synonyms":[{"name":"positive regulation of dendritic cell apoptosis","type":"narrow"}],"termid":"GO:2000670"}


id: GO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"minus-end-directed organelle transport along microtubule","termid":"GO:0072385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"minus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule minus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072382"}


id: FYPO:0005370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which occurrence of errors, usually small deletions, upon repair of double-strand breaks in DNA by nonhomologous end joining is increased.","definition_xrefs":["PMID:11226171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair via nonhomologous end joining","termid":"FYPO:0003661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0000293","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased fidelity of double-strand break repair via nonhomologous end joining","termid":"FYPO:0005370"}


id: PR:O74803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UV excision repair protein RAD23 homolog B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV excision repair protein rhp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.12","secondary_identifiers":["UniProtKB:O74803"],"synonyms":[{"name":"RAD23 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2D10.12","type":"related"},{"name":"Spom972h-RAD23B","type":"exact"}],"termid":"PR:O74803"}


id: GO:0070400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a D-alanyl ester of teichoic acid. Alanylation of teichoic acids modulates the properties of the bacterial cell wall and modulates the inflammatory properties of the teichoic acid.","definition_xrefs":["PMID:14665680","PMID:16020688","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"teichoic acid D-alanylation","synonyms":[{"name":"teichoic acid alanylation","type":"exact"}],"termid":"GO:0070400"}


id: PBO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haptoglobin","termid":"PBO:0050526"}


id: GO:0102081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homotaurine + 2-oxoglutarate(2-) = 3-sulfopropanal + L-glutamate(1-).","definition_xrefs":["EC:2.6.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"homotaurine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["MetaCyc:RXN-10822"],"termid":"GO:0102081"}


id: PR:O74746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02702","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J domain-containing protein spf31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.05c","secondary_identifiers":["UniProtKB:O74746"],"synonyms":[{"name":"Spom972h-DNAJC8","type":"exact"}],"termid":"PR:O74746"}


id: PBO:0061608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1","termid":"PBO:0061608"}


id: GO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Downregulation of MAP kinase activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (mating sensu Saccharomyces) (obsolete GO:0000174)","synonyms":[{"name":"inactivation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000174"}


id: PBO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 19","termid":"PBO:0075207"}


id: PBO:0086386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative calcium channel involved in calcium release under hypotonic stress; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; FLC2 has a paralog, YOR365C, that arose from the whole genome duplication","termid":"PBO:0086386"}


id: GO:0050842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"copper incorporation into metallo-sulfur cluster","termid":"GO:0018427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"copper incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide","termid":"GO:0050842"}


id: FYPO:0002111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable tapered cell","termid":"FYPO:0002109"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable tapered vegetative cell","synonyms":[{"name":"inviable bottle-shaped vegetative cell","type":"exact"},{"name":"inviable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable bottle/skittle vegetative cell","type":"exact"},{"name":"inviable skittle-shaped vegetative cell","type":"exact"},{"name":"inviable tapered cell during vegetative growth","type":"exact"},{"name":"lethal; tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002111"}


id: SO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat_region containing repeat_units of 1 bp that is repeated multiple times in tandem.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric_repeat","synonyms":[{"name":"monomeric repeat","type":"exact"}],"termid":"SO:0001934"}


id: PBO:0030000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_decreased_numbers","termid":"PBO:0030000"}


id: GO:0035980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The growth of colonies in filamentous chains of cells as a result of a reduced availability of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth in response to nitrogen limitation (obsolete GO:0035980)","synonyms":[{"name":"invasive growth in response to nitrogen limitation","type":"exact"}],"termid":"GO:0035980"}


id: GO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with parathyroid hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"parathyroid hormone receptor activity","termid":"GO:0004991"}


id: PATO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001213 mass_unit (obsolete PATO:0001213)","termid":"PATO:0001213"}


id: PR:O74860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal kinase C18.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.10","synonyms":[{"name":"Spom972h-SPCC18.10","type":"exact"}],"termid":"PR:O74860"}


id: GO:0140714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that assists early maturation of nascent 60S ribosomal subunits. The complex interacts with the large ribosomal subunit rRNA via one of the components (Urb2 in S. cerevisiae) and requires a RNA helicase (Dbp6 in S. cerevisiae).","definition_xrefs":["PMID:17145778","GOC:lnp","PMID:9528757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"large ribosomal subunit pre-assembly complex","termid":"GO:0140714"}


id: PBO:0003533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Borealin homolog Nbl1","termid":"PBO:0003533"}


id: GO:0062027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032436"},{"relation_name":"is_a","term_name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"},{"relation_name":"positively_regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process","termid":"GO:0062027"}


id: PBO:0073792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 12","termid":"PBO:0073792"}


id: PBO:0039189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 1","termid":"PBO:0039189"}


id: PBO:0041439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 57","termid":"PBO:0041439"}


id: SO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"forward","termid":"SO:0001030"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward_primer","synonyms":[{"name":"DNA forward primer","type":"exact"},{"name":"forward DNA primer","type":"exact"},{"name":"forward primer","type":"exact"},{"name":"forward primer oligo","type":"exact"},{"name":"forward primer oligonucleotide","type":"exact"},{"name":"forward primer polynucleotide","type":"exact"},{"name":"forward primer sequence","type":"exact"}],"termid":"SO:0000121"}


id: PBO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 8 (pseudogene)","termid":"PBO:0050040"}


id: PBO:0043126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 4","termid":"PBO:0043126"}


id: GO:0051552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavones, a class of pigmented plant compounds based on 2-phenyl-4H-1-benzopyran-4-one (2-phenylchromone).","definition_xrefs":["PMID:18567791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavone metabolic process","synonyms":[{"name":"2-phenyl-4H-1-benzopyran-4-one metabolic process","type":"narrow"},{"name":"2-phenyl-4H-1-benzopyran-4-one metabolism","type":"narrow"},{"name":"2-phenylchromone metabolic process","type":"narrow"},{"name":"2-phenylchromone metabolism","type":"narrow"},{"name":"flavone metabolism","type":"exact"}],"termid":"GO:0051552"}


id: PBO:0110332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 2","termid":"PBO:0110332"}


id: GO:0060561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in morphogenesis","synonyms":[{"name":"apoptosis involved in development","type":"related"},{"name":"apoptosis involved in morphogenesis","type":"narrow"},{"name":"morphogenetic apoptosis","type":"related"}],"termid":"GO:0060561"}


id: GO:0035166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stages of blood cell formation that take place after completion of embryonic development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic hemopoiesis","synonyms":[{"name":"post-embryonic haemopoiesis","type":"exact"}],"termid":"GO:0035166"}


id: PBO:0031183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mating_efficiency","termid":"PBO:0031183"}


id: MOD:01905
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["RESID:AA0473","PubMed:7592021","PubMed:8557573"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01905"}


id: FYPO:0003316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the growing cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to growing cell tip","synonyms":[{"name":"normal protein localisation to growing cell tip","type":"exact"},{"name":"normal protein localization to growing cell end","type":"exact"},{"name":"normal protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003316"}


id: PBO:0059297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L46","termid":"PBO:0059297"}


id: PBO:0083880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase; reduces a specific subset of siderophore-bound iron prior to uptake by transporters; expression induced by low iron levels","termid":"PBO:0083880"}


id: PBO:0070197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 121 pseudogene","termid":"PBO:0070197"}


id: PBO:0076448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 4","termid":"PBO:0076448"}


id: PBO:0017836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc4","termid":"PBO:0017836"}


id: PBO:0054182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1556","termid":"PBO:0054182"}


id: PBO:0052537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 10","termid":"PBO:0052537"}


id: GO:0035426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between the extracellular matrix and a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular matrix-cell signaling","synonyms":[{"name":"cell-extracellular matrix signalling","type":"exact"},{"name":"extracellular matrix-cell signalling","type":"exact"}],"termid":"GO:0035426"}


id: PBO:0065321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 44, pseudogene","termid":"PBO:0065321"}


id: PATO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and orange hue with a slight amount of gray.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vermilion","termid":"PATO:0001302"}


id: PBO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8","termid":"PBO:0039625"}


id: PBO:0050241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 19","termid":"PBO:0050241"}


id: GO:0071268
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of homocysteine, 2-amino-4-sulfanylbutanoic acid.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"homocysteine metabolic process","termid":"GO:0050667"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"homocysteine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homocysteine anabolism","type":"exact"},{"name":"homocysteine biosynthesis","type":"exact"},{"name":"homocysteine formation","type":"exact"},{"name":"homocysteine synthesis","type":"exact"}],"termid":"GO:0071268","terms_by_termid":{"GO:0071269":null}}


id: GO:0009342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase (NADPH) activity.","definition_xrefs":["GOC:mah","PMID:4565085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex","termid":"GO:0031026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex (NADPH)","termid":"GO:0009342"}


id: PBO:0026786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascus_morphology","termid":"PBO:0026786"}


id: GO:0110012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a P-body.","definition_xrefs":["PMID:28031482","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to P-body","synonyms":[{"name":"protein localisation to P-body","type":"exact"},{"name":"protein localization to P body","type":"exact"},{"name":"protein localization to cytoplasmic mRNA processing body","type":"exact"}],"termid":"GO:0110012"}


id: GO:0035900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lack of contact with other members of the same species.","definition_xrefs":["GOC:bf","PMID:20203532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isolation stress","synonyms":[{"name":"response to social isolation","type":"exact"}],"termid":"GO:0035900"}


id: PBO:0089226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific intrinsically disordered protein","termid":"PBO:0089226"}


id: PBO:0005135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not2 (predicted)","termid":"PBO:0005135"}


id: MOD:01891
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-histidine residue to form N-[(L-histidin-1'-yl)methyl]-L-methionine.","definition_xrefs":["PubMed:19622680","RESID:AA0566#MET"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine (Met)","synonyms":[{"name":"(2S)-2-([(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)methyl]amino)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine","type":"exact"}],"termid":"MOD:01891"}


id: PBO:0043833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 4 like","termid":"PBO:0043833"}


id: PR:O74457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-alpha-acetyltransferase 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23091:SF5","OMA:SCHPO04414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase B complex catalytic subunit naa20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.12","secondary_identifiers":["UniProtKB:O74457"],"synonyms":[{"name":"NatB Nalpha terminal acetyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatB complex subunit naa20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA20","type":"exact"}],"termid":"PR:O74457"}


id: MOD:00583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a thiophosphono group (H2PO2S, 'thiophosphate').","definition_xrefs":["Unimod:260","PubMed:12110917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphorylated residue","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:00583"}


id: GO:0060807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that ultimately results in a cell being specified to adopt a definitive endodermal cell fate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification (obsolete GO:0060807)","termid":"GO:0060807"}


id: SO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"biomaterial_region","termid":"SO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_region","synonyms":[{"name":"construct","type":"exact"},{"name":"engineered region","type":"exact"},{"name":"engineered sequence","type":"exact"}],"termid":"SO:0000804"}


id: GO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of and contributing to an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"somatic recombination of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic recombination of antibody genes during immune response","type":"related"},{"name":"somatic recombination of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002204"}


id: SO:1001263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a translational frameshift of +1.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translationally_frameshifted","termid":"SO:0000887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_translationally_frameshifted","synonyms":[{"name":"plus 1 translationally frameshifted","type":"exact"}],"termid":"SO:1001263"}


id: PBO:0064367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 1","termid":"PBO:0064367"}


id: PBO:0040869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMF antisense RNA 1","termid":"PBO:0040869"}


id: PBO:0051300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-37 (non-functional)","termid":"PBO:0051300"}


id: GO:0010342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The separation of the multi-nucleate endosperm into individual cells. In many plant species, the endosperm that nurtures the embryo in the seed initially develops as a syncytium. This syncytial phase ends with simultaneous partitioning of the multi-nucleate cytoplasm into individual cells, a process referred to as cellularization.","definition_xrefs":["PMID:12421698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosperm cellularization","synonyms":[{"name":"cellularization of endosperm","type":"exact"}],"termid":"GO:0010342"}


id: PBO:0080698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 4","termid":"PBO:0080698"}


id: PBO:0058722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6850","termid":"PBO:0058722"}


id: FYPO:0005028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased H4-K20 dimethylation during vegetative growth","synonyms":[{"name":"decreased H4K20me2 during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4-K20 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4-K20 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005028"}


id: FYPO:0003159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP (cAMP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cAMP absent from cell","synonyms":[{"name":"cyclic AMP absent from cell","type":"exact"}],"termid":"FYPO:0003159"}


id: PBO:0082762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small subunit processome; involved in 40S ribosomal subunit biogenesis; interacts with snR30 and is required for dissociation of snR30 from large pre-ribosomal particles; has homology to PINc domain protein Fcf1p, although the PINc domain of Utp23p is not required for function; essential protein","termid":"PBO:0082762"}


id: GO:0045905
data:
  {"annotated_genes":["SJAG_02189","SJAG_05265","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65711,67572,90976],"is_not":false,"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational termination","termid":"GO:0006449"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"positively_regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational termination","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of translational termination","type":"narrow"},{"name":"stimulation of translational termination","type":"narrow"},{"name":"up regulation of translational termination","type":"exact"},{"name":"up-regulation of translational termination","type":"exact"},{"name":"upregulation of translational termination","type":"exact"}],"termid":"GO:0045905","terms_by_termid":{"GO:0045905":null}}


id: FYPO:0005891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased nuclease activity during nitrogen starvation","synonyms":[{"name":"decreased nuclease activity during nitrogen depletion","type":"exact"},{"name":"decreased nuclease activity during nitrogen deprivation","type":"exact"},{"name":"reduced nuclease activity during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005891"}


id: PBO:0111442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation inhibitor, IMPACT domain protein","termid":"PBO:0111442"}


id: PBO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLE1 RNA export mediator","termid":"PBO:0048680"}


id: PATO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's exhibiting transient abnormal enlargement, not due to cell proliferation.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"has_part","term_name":"protruding","termid":"PATO:0001598"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swollen","synonyms":[{"name":"swelling","type":"narrow"}],"termid":"PATO:0001851"}


id: PBO:0089014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26","termid":"PBO:0089014"}


id: GO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specialized resting state that cells enter in response to cues from the cell's environment. Quiescence is characterized by the absence of cell growth and division, by a reprogramming of global gene expression, and by changes characteristic of the organism and specific cell type. Depending on external conditions, quiescence may persist until cell death or cells may resume cell growth and division. In some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["GOC:mah","GOC:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell quiescence","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cell cycle quiescence","type":"related"},{"name":"cellular quiescence","type":"exact"},{"name":"quiescence","type":"broad"}],"termid":"GO:0044838"}


id: GO:0072194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle tissue development","termid":"GO:0048745"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney smooth muscle tissue development","termid":"GO:0072194"}


id: GO:1904595
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108127],"is_not":false,"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["PMID:25417108","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of termination of DNA-templated transcription","termid":"GO:0060566"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"positively_regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of RNA 3'-end formation by RNA polymerase II","type":"narrow"},{"name":"activation of RNA polymerase II transcription termination","type":"narrow"},{"name":"activation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"activation of termination of RNA polymerase II transcription","type":"narrow"},{"name":"activation of transcription termination from Pol II promoter","type":"narrow"},{"name":"activation of transcription termination from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"positive regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"positive regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"positive regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"up regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"up regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"up regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"up regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"up regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"up-regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"up-regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"up-regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"up-regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"up-regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"upregulation of RNA polymerase II transcription termination","type":"exact"},{"name":"upregulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"upregulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"upregulation of transcription termination from Pol II promoter","type":"exact"},{"name":"upregulation of transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904595","terms_by_termid":{"GO:1904595":null}}


id: GO:1990380
data:
  {"annotated_genes":["SJAG_01481","SJAG_00644"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84590,107865],"is_not":false,"summary":null,"term":"GO:1990380"}]},"cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys48 residue of ubiquitin.","definition_xrefs":["GOC:PARL","PMID:22970133","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00644":null,"SJAG_01481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"K48-linked deubiquitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5690870","Reactome:R-HSA-9711058"],"synonyms":[{"name":"K48-specific deubiquitinase activity","type":"exact"},{"name":"K48-specific deubiquitinating activity","type":"exact"},{"name":"Lys48-specific deubiquitinase activity","type":"exact"}],"termid":"GO:1990380","terms_by_termid":{"GO:1990380":null}}


id: PBO:0028195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_azetidine-2-carboxylic_acid_acetyltransferase_activity","termid":"PBO:0028195"}


id: PBO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor eIF5A (predicted)","termid":"PBO:0002388"}


id: PBO:0031298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_disassembly","termid":"PBO:0031298"}


id: PBO:0052147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP2 antisense RNA 1","termid":"PBO:0052147"}


id: GO:0032121
data:
  {"annotated_genes":["SJAG_05196","SJAG_01777","SJAG_03092","SJAG_05260","SJAG_03287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83627,85966,96065,98978,101253],"is_not":false,"summary":null,"term":"GO:0032121"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the spindle pole body, facilitating bouquet formation.","definition_xrefs":["GOC:pr","PMID:16615890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05196":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"meiotic attachment of telomeric heterochromatin to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to spindle pole body","type":"broad"},{"name":"attachment of telomeric chromatin to spindle pole body","type":"broad"}],"termid":"GO:0032121","terms_by_termid":{"GO:0032121":null}}


id: PBO:0089249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Taz1","termid":"PBO:0089249"}


id: PBO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII A chain","termid":"PBO:0046813"}


id: GO:1903536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:mr","PMID:12018418","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of lactose biosynthetic process","termid":"GO:1903534"},{"relation_name":"positively_regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactose biosynthetic process","synonyms":[{"name":"activation of lactose anabolism","type":"narrow"},{"name":"activation of lactose biosynthesis","type":"narrow"},{"name":"activation of lactose biosynthetic process","type":"narrow"},{"name":"activation of lactose formation","type":"narrow"},{"name":"activation of lactose synthesis","type":"narrow"},{"name":"positive regulation of lactose anabolism","type":"exact"},{"name":"positive regulation of lactose biosynthesis","type":"exact"},{"name":"positive regulation of lactose formation","type":"exact"},{"name":"positive regulation of lactose synthesis","type":"exact"},{"name":"up regulation of lactose anabolism","type":"exact"},{"name":"up regulation of lactose biosynthesis","type":"exact"},{"name":"up regulation of lactose biosynthetic process","type":"exact"},{"name":"up regulation of lactose formation","type":"exact"},{"name":"up regulation of lactose synthesis","type":"exact"},{"name":"up-regulation of lactose anabolism","type":"exact"},{"name":"up-regulation of lactose biosynthesis","type":"exact"},{"name":"up-regulation of lactose biosynthetic process","type":"exact"},{"name":"up-regulation of lactose formation","type":"exact"},{"name":"up-regulation of lactose synthesis","type":"exact"},{"name":"upregulation of lactose anabolism","type":"exact"},{"name":"upregulation of lactose biosynthesis","type":"exact"},{"name":"upregulation of lactose biosynthetic process","type":"exact"},{"name":"upregulation of lactose formation","type":"exact"},{"name":"upregulation of lactose synthesis","type":"exact"}],"termid":"GO:1903536"}


id: GO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the epithelial cells to the mesenchymal cells of the salivary gland.","definition_xrefs":["PMID:18559345","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signalling","type":"exact"}],"termid":"GO:0060683"}


id: PBO:0084017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoprotein subunit of transmembrane ring of nuclear pore complex; contributes to nucleocytoplasmic transport, nuclear pore complex (NPC) biogenesis and spindle pole body duplication; type II transmembrane protein composed of N-terminal cytosolic and C-terminal nuclear envelope lumenal domains; homologous to human NUP210","termid":"PBO:0084017"}


id: PBO:0052292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 like","termid":"PBO:0052292"}


id: GO:0032966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of collagen metabolic process","termid":"GO:0010713"},{"relation_name":"is_a","term_name":"regulation of collagen biosynthetic process","termid":"GO:0032965"},{"relation_name":"negatively_regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen biosynthetic process","synonyms":[{"name":"negative regulation of collagen anabolism","type":"exact"},{"name":"negative regulation of collagen biosynthesis","type":"exact"},{"name":"negative regulation of collagen formation","type":"exact"},{"name":"negative regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032966"}


id: GO:2000618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4-K16 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4-K16 acetylation (obsolete GO:2000618)","synonyms":[{"name":"regulation of histone H4 acetylation at K16","type":"exact"}],"termid":"GO:2000618"}


id: GO:0048216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"negatively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"down regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"down-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"downregulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"inhibition of Golgi vesicle fusion to target membrane","type":"narrow"}],"termid":"GO:0048216"}


id: FYPO:0002416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells in which cell shape is altered and cell volume is larger than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen cells, abnormal cell shape (obsolete FYPO:0002416)","synonyms":[{"name":"inviable microcolonies swollen misshapen cells","type":"related"},{"name":"inviable microcolony, enlarged vegetative cells with abnormal cell shape","type":"related"},{"name":"inviable microcolony, large vegetative cells with abnormal cell shape","type":"related"},{"name":"inviable microcolony, vegetative cells with increased cell size and abnormal cell shape","type":"related"},{"name":"inviable microcolony, vegetative cells with increased cell volume and abnormal cell shape","type":"exact"}],"termid":"FYPO:0002416"}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: GO:0048582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of post-embryonic development","synonyms":[{"name":"activation of post-embryonic development","type":"narrow"},{"name":"stimulation of post-embryonic development","type":"narrow"},{"name":"up regulation of post-embryonic development","type":"exact"},{"name":"up-regulation of post-embryonic development","type":"exact"},{"name":"upregulation of post-embryonic development","type":"exact"}],"termid":"GO:0048582"}


id: PBO:0055860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 6","termid":"PBO:0055860"}


id: PBO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 27","termid":"PBO:0046646"}


id: GO:0090186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of pancreatic juice secretion","termid":"GO:0090186"}


id: GO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microglial cell. Microglia are glial cells that act as the immune cells of the central nervous system. They form part of the supporting structure of this system.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"macrophage differentiation","termid":"GO:0030225"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglia differentiation","synonyms":[{"name":"microglial cell differentiation","type":"exact"}],"termid":"GO:0014004"}


id: GO:1901884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxycoumarin.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"4-hydroxycoumarin metabolic process","termid":"GO:1901882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"4-hydroxycoumarin biosynthetic process","synonyms":[{"name":"4-hydroxycoumarin anabolism","type":"exact"},{"name":"4-hydroxycoumarin biosynthesis","type":"exact"},{"name":"4-hydroxycoumarin formation","type":"exact"},{"name":"4-hydroxycoumarin synthesis","type":"exact"}],"termid":"GO:1901884"}


id: PR:O14352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.06","synonyms":[{"name":"Spom972h-lsm4","type":"exact"}],"termid":"PR:O14352"}


id: PBO:0054716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2125","termid":"PBO:0054716"}


id: GO:0080018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an anthocyanin + UDP-D-glucose = an anthocyanin-5-O-glucoside + UDP.","definition_xrefs":["PMID:15807784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"anthocyanin 5-O-glucosyltransferase activity","termid":"GO:0080018"}


id: GO:0043331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dsRNA","synonyms":[{"name":"response to double-stranded RNA","type":"exact"}],"termid":"GO:0043331"}


id: PBO:0058747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6871","termid":"PBO:0058747"}


id: GO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reverse transcription of an RNA molecule followed by recombination between the resultant cDNA and its homologous chromosomal allele.","definition_xrefs":["GOC:jl","PMID:8380627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"RNA-mediated DNA recombination","termid":"GO:0042152"}


id: PBO:0018130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain endoplasmic reticulum membrane organization protein (predicted)","termid":"PBO:0018130"}


id: PBO:0082829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein involved in exocytic transport from the Golgi; mutation is synthetically lethal with apl2 vps1 double mutation; member of a protein superfamily with orthologs in diverse organisms; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0082829"}


id: PBO:0110233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral nuclear inner membrane protein Bqt4","termid":"PBO:0110233"}


id: PBO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex zeta subunit Ost5 (predicted)","termid":"PBO:0005707"}


id: PBO:0083555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM8; identified by fungal homology and RT-PCR","termid":"PBO:0083555"}


id: GO:0098670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface that mediates/triggers viral entry by endocytosis/pinocytosis or by inducing fusion/penetration.","definition_xrefs":["VZ:3942","PMID:18351291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry receptor-mediated virion attachment to host cell","synonyms":[{"name":"viral attachment to host entry receptor","type":"exact"}],"termid":"GO:0098670"}


id: PBO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 11","termid":"PBO:0060278"}


id: GO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids.","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"gap junction assembly","termid":"GO:0016264"}


id: GO:1903795
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inorganic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of inorganic anion membrane transport","type":"exact"},{"name":"regulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903795","terms_by_termid":{"GO:2000185":null}}


id: GO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of xylan in other organism involved in symbiotic interaction (obsolete GO:0052366)","synonyms":[{"name":"catabolism by organism of xylan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052366"}


id: PBO:0040249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4D cysteine peptidase","termid":"PBO:0040249"}


id: GO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a trigeminal ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion maturation","termid":"GO:0061558"},{"relation_name":"part_of","term_name":"trigeminal nerve maturation","termid":"GO:0021635"},{"relation_name":"part_of","term_name":"trigeminal ganglion development","termid":"GO:0061551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion maturation","synonyms":[{"name":"trigeminal ganglia maturation","type":"related"}],"termid":"GO:0061557"}


id: GO:0022870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + mannose(out) = protein histidine + mannose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0003674","GO:0022857","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity","synonyms":[{"name":"mannose PTS transporter activity","type":"exact"}],"termid":"GO:0022870"}


id: PBO:0029293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus_during_meiosis","termid":"PBO:0029293"}


id: PR:O60081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm72 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.07","synonyms":[{"name":"Spom972h-trm72","type":"exact"}],"termid":"PR:O60081"}


id: PBO:0064358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-melanin concentrating hormone like 1 (pseudogene)","termid":"PBO:0064358"}


id: PBO:0090044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4","termid":"PBO:0090044"}


id: GO:0021906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of the hindbrain-spinal cord boundary.","definition_xrefs":["PMID:11262869","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain-spinal cord boundary formation","termid":"GO:0021906"}


id: GO:1990000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of amyloid fibrils, insoluble fibrous protein aggregates exhibiting beta sheet structure, from proteins.","definition_xrefs":["GOC:jj","PMID:22817896","GOC:sj","PMID:21148556","PMID:28937655","GOC:cvs","GOC:ppm","PMID:29654159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid fibril formation","synonyms":[{"name":"amyloid fibril assembly","type":"related"},{"name":"amyloid structure assembly","type":"related"},{"name":"amyloid structure formation","type":"related"}],"termid":"GO:1990000"}


id: PBO:0003576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme (predicted)","termid":"PBO:0003576"}


id: PBO:0041910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBLL1 antisense RNA 1","termid":"PBO:0041910"}


id: PBO:0056636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13 pseudogene 1","termid":"PBO:0056636"}


id: PBO:0067627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 799, pseudogene","termid":"PBO:0067627"}


id: PBO:0084011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen phosphorylase required for the mobilization of glycogen; non-essential; regulated by cyclic AMP-mediated phosphorylation; phosphorylation by Cdc28p may coordinately regulate carbohydrate metabolism and the cell cycle; expression is regulated by stress-response elements and by the HOG MAP kinase pathway","termid":"PBO:0084011"}


id: GO:0017157
data:
  {"annotated_genes":["SJAG_03763","SJAG_04509","SJAG_02366","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84129,90027,94574],"is_not":false,"summary":null,"term":"GO:0017157"},{"annotations":[96327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02366":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017157","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: GO:0044438
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microbody, a cytoplasmic organelle, spherical or oval in shape, that is bounded by a single membrane and contains oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microbody part (obsolete GO:0044438)","termid":"GO:0044438"}


id: PBO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase","termid":"PBO:0001053"}


id: PBO:0087757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease;","termid":"PBO:0087757"}


id: GO:0080013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranyl-geranyl diphosphate + H2O = (E,E)-geranyllinalool + diphosphate.","definition_xrefs":["MetaCyc:RXN-10441","PMID:18398052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(E,E)-geranyllinalool synthase activity","secondary_identifiers":["RHEA:38155"],"termid":"GO:0080013"}


id: PBO:0075810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 3","termid":"PBO:0075810"}


id: PBO:0053118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 8","termid":"PBO:0053118"}


id: PBO:0055912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 36","termid":"PBO:0055912"}


id: PBO:0080914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 3","termid":"PBO:0080914"}


id: GO:0002128
data:
  {"annotated_genes":["SJAG_04649","SJAG_01269","SJAG_02352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110975],"is_not":false,"summary":null,"term":"GO:0002128"},{"annotations":[99048,94020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null,"SJAG_04649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA nucleoside ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002128","terms_by_termid":{"GO:0002128":null,"GO:0002130":null}}


id: GO:0045500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to sevenless (sev; a receptor tyrosine kinase) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","PMID:10771085","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sevenless signaling pathway","synonyms":[{"name":"sev receptor signaling pathway","type":"exact"},{"name":"sev signaling pathway","type":"exact"},{"name":"sevenless signalling pathway","type":"exact"}],"termid":"GO:0045500"}


id: PBO:0050123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 33","termid":"PBO:0050123"}


id: GO:0098516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which high humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of high humidity","termid":"GO:0098516"}


id: PR:Q9UTI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11549:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.04","secondary_identifiers":["UniProtKB:Q9UTI7"],"synonyms":[{"name":"Spom972h-TYMS","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TSase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI7"}


id: GO:0010716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix disassembly","synonyms":[{"name":"down regulation of extracellular matrix disassembly","type":"exact"},{"name":"down-regulation of extracellular matrix disassembly","type":"exact"},{"name":"downregulation of extracellular matrix disassembly","type":"exact"},{"name":"inhibition of extracellular matrix disassembly","type":"narrow"},{"name":"negative regulation of extracellular matrix breakdown","type":"exact"},{"name":"negative regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010716"}


id: PBO:0080648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat, sterile alpha motif and U-box domain containing 1","termid":"PBO:0080648"}


id: PBO:0069523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 792, pseudogene","termid":"PBO:0069523"}


id: PBO:0071506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 9","termid":"PBO:0071506"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: PBO:0024812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_relation_between_material_entities","termid":"PBO:0024812"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12172:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: PBO:0031451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-perforated_nuclear_envelope","termid":"PBO:0031451"}


id: PBO:0077947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 7-1","termid":"PBO:0077947"}


id: PBO:0003647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphate aminotransferase imidazole acetol phosphate transaminase His3","termid":"PBO:0003647"}


id: PBO:0068905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 147, pseudogene","termid":"PBO:0068905"}


id: GO:0047488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the eliminative cleavage of polysaccharides containing 1,4-linked D-glucuronate or L-iduronate residues and 1,4-alpha-linked 2-sulfoamino-2-deoxy-6-sulfo-D-glucose residues to give oligosaccharides with terminal 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their nonreducing ends.","definition_xrefs":["EC:4.2.2.7","MetaCyc:4.2.2.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"heparin lyase activity","synonyms":[{"name":"heparan sulfate lyase activity","type":"related"},{"name":"heparin eliminase activity","type":"related"},{"name":"heparinase activity","type":"related"}],"termid":"GO:0047488"}


id: PBO:0070951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 6","termid":"PBO:0070951"}


id: GO:0010512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:dph","GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"negatively_regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010512"}


id: PBO:0091333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. crassa Pzl1","termid":"PBO:0091333"}


id: GO:0035244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the carbon atom of an arginine residue in a protein. This modification has been detected in anaerobic bacteria.","definition_xrefs":["PMID:33162960","PMID:29743535","GOC:bf","RHEA:66028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"protein-arginine C-methyltransferase activity","secondary_identifiers":["RESID:AA0272","EC:2.1.1.379"],"synonyms":[{"name":"peptidyl arginine C-methyltransferase activity","type":"exact"},{"name":"peptidyl-arginine C-methylase activity","type":"exact"},{"name":"peptidyl-arginine C-methyltransferase activity","type":"exact"},{"name":"protein-arginine C-methylase activity","type":"exact"}],"termid":"GO:0035244"}


id: PBO:0111744
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0111744"}


id: PBO:0056082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 9","termid":"PBO:0056082"}


id: FYPO:0004094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during the meiotic cell cycle. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization during meiotic cell cycle","synonyms":[{"name":"abnormal cellular protein localisation during meiotic cell cycle","type":"exact"},{"name":"abnormal cellular protein localization during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004094"}


id: PBO:0057212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378b","termid":"PBO:0057212"}


id: PBO:0060115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 16","termid":"PBO:0060115"}


id: PBO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 21","termid":"PBO:0071180"}


id: GO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism activates or increases the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of viral release from host cell (obsolete GO:0044791)","termid":"GO:0044791"}


id: PBO:0040570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GALT4 antisense RNA 1","termid":"PBO:0040570"}


id: FYPO:0004663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal viability following cellular response to methyl methanesulfonate","synonyms":[{"name":"normal cell population viability following cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal viability following MMS exposure","type":"exact"},{"name":"normal viability following cellular response to MMS","type":"exact"},{"name":"normal viability following cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0004663"}


id: SO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA_gene","termid":"SO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA_gene","synonyms":[{"name":"mitochondrial large subunit rRNA gene","type":"exact"},{"name":"rRNA 21S gene","type":"exact"},{"name":"rRNA_21S_gene","type":"exact"}],"termid":"SO:0002364"}


id: GO:1901450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to butan-1-ol","termid":"GO:1901448"},{"relation_name":"positively_regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to butan-1-ol","synonyms":[{"name":"activation of response to butan-1-ol","type":"narrow"},{"name":"up regulation of response to butan-1-ol","type":"exact"},{"name":"up-regulation of response to butan-1-ol","type":"exact"},{"name":"upregulation of response to butan-1-ol","type":"exact"}],"termid":"GO:1901450"}


id: PBO:0016576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase Xks1 (predicted)","termid":"PBO:0016576"}


id: PBO:0062048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 35","termid":"PBO:0062048"}


id: PBO:0088833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase","termid":"PBO:0088833"}


id: PBO:0061366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 26","termid":"PBO:0061366"}


id: GO:0004185
data:
  {"annotated_genes":["SJAG_01868","SJAG_00975","SJAG_04819"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84433,87995,100543],"is_not":false,"summary":null,"term":"GO:0004185"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01868":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"serine-type carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-158251","EC:3.4.16.-"],"synonyms":[{"name":"serine carboxypeptidase activity","type":"exact"}],"termid":"GO:0004185","terms_by_termid":{"GO:0004185":null}}


id: PBO:0057171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 323b","termid":"PBO:0057171"}


id: GO:2000257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein activation cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"regulation of protein activation cascade","synonyms":[{"name":"regulation of protein activation pathway","type":"exact"},{"name":"regulation of protein activitory cascade","type":"exact"}],"termid":"GO:2000257"}


id: PBO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.1","termid":"PBO:0000393"}


id: GO:0043917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 1,5-bisphosphate = D-ribulose 1,5-bisphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate isomerase activity","secondary_identifiers":["EC:5.3.1.29","MetaCyc:RXN-8801","RHEA:32243"],"synonyms":[{"name":"ribose-1,5-bisphosphate isomerase activity","type":"exact"}],"termid":"GO:0043917"}


id: GO:0120293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aggregation of axonemal dyneins, their specific assembly factors, and broadly-acting chaperones that is located in the cytoplasm.","definition_xrefs":["PMID:30561330","GOC:krc","PMID:33263282","PMID:32898505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dynein axonemal particle","synonyms":[{"name":"DynAP","type":"related"}],"termid":"GO:0120293"}


id: PBO:0079854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B3 (pseudogene)","termid":"PBO:0079854"}


id: GO:1902847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GOC:TermGenie","GOC:sjp","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal signal transduction","termid":"GO:1902847"}


id: GO:0046074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dTMP, deoxyribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009178"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dTMP metabolic process","termid":"GO:0046073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTMP catabolic process","synonyms":[{"name":"dTMP breakdown","type":"exact"},{"name":"dTMP catabolism","type":"exact"},{"name":"dTMP degradation","type":"exact"}],"termid":"GO:0046074"}


id: SO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ACS is an 11-bp sequence of the form 5'-WTTTAYRTTTW-3' which is at the core of every yeast ARS, and is necessary but not sufficient for recognition and binding by the origin recognition complex (ORC). Functional ARSs require an ACS, as well as other cis elements in the 5' (C domain) and 3' (B domain) flanking sequences of the ACS.","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"ARS","termid":"SO:0000436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS_consensus_sequence","synonyms":[{"name":"ACS","type":"exact"},{"name":"ARS consensus sequence","type":"exact"}],"termid":"SO:0002004"}


id: GO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mesonephric comma-shaped body is generated and organized. The mesonephric comma-shaped body is the precursor structure to the mesonephric S-shaped body that contributes to the morphogenesis of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"comma-shaped body morphogenesis","termid":"GO:0072049"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric comma-shaped body morphogenesis","termid":"GO:0061236"}


id: GO:1905353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ciliary transition fiber.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:24189274","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"ciliary transition fiber assembly","synonyms":[{"name":"centriolar distal appendage assembly","type":"related"},{"name":"centriolar distal appendage formation","type":"related"},{"name":"cilial transition fiber assembly","type":"exact"},{"name":"cilial transition fiber formation","type":"exact"},{"name":"cilial transition fibre assembly","type":"exact"},{"name":"cilial transition fibre formation","type":"exact"},{"name":"ciliary transition fiber formation","type":"exact"},{"name":"ciliary transition fibre assembly","type":"exact"},{"name":"ciliary transition fibre formation","type":"exact"},{"name":"cilium transition fiber assembly","type":"exact"},{"name":"cilium transition fiber formation","type":"exact"},{"name":"cilium transition fibre assembly","type":"exact"},{"name":"cilium transition fibre formation","type":"exact"},{"name":"distal appendage of basal body assembly","type":"related"},{"name":"distal appendage of basal body formation","type":"related"},{"name":"distal appendage of centriole assembly","type":"related"},{"name":"distal appendage of centriole formation","type":"related"},{"name":"distal appendage of mother centriole assembly","type":"related"},{"name":"distal appendage of mother centriole formation","type":"related"}],"termid":"GO:1905353"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: PBO:0055180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2604","termid":"PBO:0055180"}


id: PBO:0048967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1 pseudogene 2","termid":"PBO:0048967"}


id: PBO:0057300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514a-1","termid":"PBO:0057300"}


id: PBO:0017469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_during","termid":"PBO:0017469"}


id: PBO:0083047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyuridine triphosphate diphosphatase (dUTPase); catalyzes hydrolysis of dUTP to dUMP and PPi, thereby preventing incorporation of uracil into DNA during replication; critical for the maintenance of genetic stability; also has diphosphatase activity on deoxyinosine triphosphate; human homolog DUT allows growth of yeast haploid dut1 null mutant after sporulation of heterozygous diploid","termid":"PBO:0083047"}


id: GO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune effector response involving T cells and B lineage cells. In the case of B lineage cells, the effector cells are the antibody secreting plasma cells whereas for T cells the effector cells may be helper T cells or cytotoxic T cells.","definition_xrefs":["GOC:add","ISBN:1405196831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune effector response involving T cells and B lineage cells","termid":"GO:0090719"}


id: GO:0051731
data:
  {"annotated_genes":["SJAG_02680","SJAG_01979","SJAG_03789","SJAG_01791","SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114671],"is_not":false,"summary":null,"term":"GO:0051731"},{"annotations":[89880,84357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[89647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"},{"annotations":[86845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NTP + 5'-dephosphopolynucleotide = NDP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00956":null,"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-dephosphopolynucleotide kinase activity","type":"exact"},{"name":"5'-hydroxyl polynucleotide kinase activity","type":"exact"},{"name":"PNK","type":"related"},{"name":"polynucleotide 5'-hydroxy-kinase activity","type":"exact"},{"name":"polynucleotide 5'-hydroxyl kinase (phosphorylating) activity","type":"exact"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051731","terms_by_termid":{"GO:0046404":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null}}


id: PR:Q9P6M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gst3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.04c","synonyms":[{"name":"GST-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gst3","type":"exact"}],"termid":"PR:Q9P6M1"}


id: PBO:0040112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2","termid":"PBO:0040112"}


id: PBO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erp2/3/4","termid":"PBO:0090056"}


id: PBO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Mbx1","termid":"PBO:0001040"}


id: FYPO:0007631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 12 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007631"}


id: PBO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 10","termid":"PBO:0042956"}


id: PBO:0090451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily Ysa1","termid":"PBO:0090451"}


id: PBO:0040789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional apoptosis regulator","termid":"PBO:0040789"}


id: GO:0014010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation","termid":"GO:0014010"}


id: PBO:0084130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexokinase isoenzyme 2; phosphorylates glucose in cytosol; predominant hexokinase during growth on glucose; represses expression of HXK1, GLK1, induces expression of its own gene; antiapoptotic; phosphorylation/dephosphorylation at Ser14 by kinase Snf1p, phosphatase Glc7p-Reg1p regulates nucleocytoplasmic shuttling of Hxk2p; functions downstream of Sit4p in control of cell cycle, mitochondrial function, oxidative stress resistance, chronological lifespan; has paralog HXK1","termid":"PBO:0084130"}


id: PBO:0059020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 9","termid":"PBO:0059020"}


id: PBO:0056396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 3","termid":"PBO:0056396"}


id: PBO:0066186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 8B pseudogene","termid":"PBO:0066186"}


id: PBO:0075710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2D (pseudogene)","termid":"PBO:0075710"}


id: PBO:0017998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein Erb1 (predicted)","termid":"PBO:0017998"}


id: FYPO:0004045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"},{"relation_name":"is_a","term_name":"tetranucleate vegetative cell with fragmented septum","termid":"FYPO:0004046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000005","FYPO:0005447","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"elongated tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"elongated tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"elongated tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"},{"name":"long tetranucleate vegetative cell with fragmented septum","type":"exact"}],"termid":"FYPO:0004045"}


id: PBO:0083843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exomer-dependent cargo protein; induces appearance of [PIN+] prion when overproduced; prion-like domain serves as a retention signal in the trans-Golgi network; predicted to be palmitoylated","termid":"PBO:0083843"}


id: GO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric capsule from unspecified parts. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule formation","termid":"GO:0072129"},{"relation_name":"part_of","term_name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule formation","termid":"GO:0061287"}


id: PBO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGR interacting protein 1","termid":"PBO:0070434"}


id: GO:0016774
data:
  {"annotated_genes":["SJAG_03457","SJAG_00636","SJAG_03660","SJAG_00881"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003991"},{"annotations":[102147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004072"},{"annotations":[87078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004349"},{"annotations":[99548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a carboxyl group (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00636":null,"SJAG_00881":null,"SJAG_03457":null,"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, carboxyl group as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.2.-"],"termid":"GO:0016774","terms_by_termid":{"GO:0003991":null,"GO:0004072":null,"GO:0004349":null,"GO:0004618":null}}


id: GO:0007225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranslational modification of members of the Hedgehog family of signaling proteins in order for Hedgehog to exert its biological activity. These modifications include cleavage of its signal sequence, autocatalytic protein cleavage and the attachment of sterol groups.","definition_xrefs":["PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"patched ligand maturation","synonyms":[{"name":"Hedgehog protein processing","type":"narrow"},{"name":"hh protein processing","type":"exact"},{"name":"patched ligand processing","type":"related"}],"termid":"GO:0007225"}


id: PBO:0089881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase Ags1","termid":"PBO:0089881"}


id: GO:1903556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["PMID:24187568","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"down regulation of TNF superfamily production","type":"related"},{"name":"down regulation of TNFSF cytokine production","type":"exact"},{"name":"down regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"down-regulation of TNF superfamily production","type":"related"},{"name":"down-regulation of TNFSF cytokine production","type":"exact"},{"name":"down-regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"downregulation of TNF superfamily production","type":"related"},{"name":"downregulation of TNFSF cytokine production","type":"exact"},{"name":"downregulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"inhibition of TNF superfamily production","type":"related"},{"name":"inhibition of TNFSF cytokine production","type":"narrow"},{"name":"inhibition of tumor necrosis factor superfamily cytokine production","type":"narrow"},{"name":"negative regulation of TNF superfamily production","type":"related"},{"name":"negative regulation of TNFSF cytokine production","type":"exact"}],"termid":"GO:1903556"}


id: PBO:0048301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPDH divergent transcript","termid":"PBO:0048301"}


id: PBO:0034583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex,_with_protein_mislocalized_to_vacuole,_during_vegetative_growth","termid":"PBO:0034583"}


id: PBO:0050047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, J (pseudogene)","termid":"PBO:0050047"}


id: GO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mating type switching","synonyms":[{"name":"down regulation of mating type switching","type":"exact"},{"name":"down-regulation of mating type switching","type":"exact"},{"name":"downregulation of mating type switching","type":"exact"},{"name":"inhibition of mating type switching","type":"narrow"}],"termid":"GO:0031495"}


id: PBO:0049954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A","termid":"PBO:0049954"}


id: GO:0006205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine metabolic process (obsolete GO:0006205)","synonyms":[{"name":"pyrimidine metabolic process","type":"exact"}],"termid":"GO:0006205"}


id: SOFP:sp_comment
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sp_comment","termid":"SOFP:sp_comment"}


id: GO:0042979
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of the enzyme ornithine decarboxylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ornithine decarboxylase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042979","terms_by_termid":{"GO:0008073":null}}


id: GO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}


id: GO:1903151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any carbohydrate transmembrane transporter activity that is involved in carbohydrate import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:TermGenie","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete carbohydrate transmembrane transporter activity involved in carbohydrate import into cell (obsolete GO:1903151)","synonyms":[{"name":"carbohydrate transmembrane transporter activity involved in carbohydrate import into cell","type":"exact"},{"name":"sugar transporter involved in carbohydrate import into cell","type":"narrow"}],"termid":"GO:1903151"}


id: MOD:01191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12766232","Unimod:211#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-ethyl iodoacetamide-d0","termid":"MOD:00561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0 - site C","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:01191"}


id: PBO:0085151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside triphosphate pyrophosphohydrolase; active against various substrates including ITP, dITP and XTP; mediates exclusion of non canonical purines, pyrimidines from dNTP pools; functions with YJL055W to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA without affecting uptake or incorporation of uracil into RNA; protein abundance increases in response to DNA replication stress; yeast HAM1 can complement knockdown of human homolog ITPA","termid":"PBO:0085151"}


id: GO:0038043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-5 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-5-mediated signaling pathway","synonyms":[{"name":"IL-5-mediated signaling pathway","type":"exact"},{"name":"interleukin-5-mediated signalling pathway","type":"exact"}],"termid":"GO:0038043"}


id: PBO:0058263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4641","termid":"PBO:0058263"}


id: FYPO:0000819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of P-factor in growth medium","synonyms":[{"name":"increased accumulation of P-factor in growth medium","type":"related"},{"name":"increased level of P-factor in growth medium","type":"exact"},{"name":"increased release of P-factor into growth medium","type":"related"}],"termid":"FYPO:0000819"}


id: GO:0016198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition of molecules at a choice point by an axon growth cone; at a choice point the growth cone determines the direction of its future growth.","definition_xrefs":["PMID:10218152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon choice point recognition","termid":"GO:0016198"}


id: _global:has_part_that_occurs_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part_that_occurs_in","secondary_identifiers":["RO:0002479"],"termid":"_global:has_part_that_occurs_in"}


id: GO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075080)","termid":"GO:0075080"}


id: FYPO:0007506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at promoter","synonyms":[{"name":"increased protein localisation to chromatin at promoter","type":"exact"},{"name":"increased protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007506"}


id: PBO:0027464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_cell_septum_biogenesis","termid":"PBO:0027464"}


id: PBO:0057973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689e","termid":"PBO:0057973"}


id: GO:0072380
data:
  {"annotated_genes":["SJAG_01496","SJAG_03865"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84151,111243],"is_not":false,"summary":null,"term":"GO:0072380"}]},"cv_name":"cellular_component","definition":"A protein complex found in yeast that contains GET4, MDY2 (GET5), SGT2, and at least two heat shock proteins, HSP104 and YBR137W. The TRC complex transfers tail-anchored (TA) proteins to GET3 for targeting to the endoplasmic reticulum membrane.","definition_xrefs":["PMID:23142665","GOC:mah","PMID:20850366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01496":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"TRC complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GET4-GET5 transmembrane domain recognition complex","type":"related"},{"name":"TMD recognition complex","type":"exact"}],"termid":"GO:0072380","terms_by_termid":{"GO:0072380":null}}


id: PBO:0067856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 158","termid":"PBO:0067856"}


id: PBO:0073571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 4","termid":"PBO:0073571"}


id: GO:1904405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:9149109","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to formaldehyde","termid":"GO:1904404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to formaldehyde","termid":"GO:1904405"}


id: GO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation","synonyms":[{"name":"activation of mesenchymal cell proliferation","type":"narrow"},{"name":"stimulation of mesenchymal cell proliferation","type":"narrow"},{"name":"up regulation of mesenchymal cell proliferation","type":"exact"},{"name":"up-regulation of mesenchymal cell proliferation","type":"exact"},{"name":"upregulation of mesenchymal cell proliferation","type":"exact"}],"termid":"GO:0002053"}


id: PBO:0087822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087822"}


id: GO:1900121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor binding","synonyms":[{"name":"down regulation of receptor binding","type":"exact"},{"name":"down regulation of receptor-associated protein activity","type":"related"},{"name":"down-regulation of receptor binding","type":"exact"},{"name":"downregulation of receptor binding","type":"exact"},{"name":"inhibition of receptor binding","type":"narrow"},{"name":"inhibition of receptor ligand","type":"narrow"}],"termid":"GO:1900121"}


id: PBO:0065391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate enriched lncRNA","termid":"PBO:0065391"}


id: PBO:0026898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026898"}


id: PBO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 8, pseudogene","termid":"PBO:0050643"}


id: PBO:0065816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A antisense RNA 1","termid":"PBO:0065816"}


id: PBO:0051258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-44 (pseudogene)","termid":"PBO:0051258"}


id: GO:1905751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["PMID:22869721","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"is_a","term_name":"positive regulation of endocytic recycling","termid":"GO:2001137"},{"relation_name":"positively_regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endosome to plasma membrane protein transport","synonyms":[{"name":"activation of endosome to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"upregulation of endosome to plasma membrane protein transport","type":"exact"}],"termid":"GO:1905751"}


id: MOD:00405
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d8 reagent.","definition_xrefs":["Unimod:12#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d8 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d8","type":"related"},{"name":"ICAT-D:2H(8)","type":"related"}],"termid":"MOD:00405"}


id: GO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a monocyte expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:11200054","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte antigen processing and presentation","termid":"GO:0002471"}


id: PBO:0056781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member C","termid":"PBO:0056781"}


id: FYPO:0004879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at the centromere central core.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at centromere central core","termid":"FYPO:0004879"}


id: PBO:0089981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine kinase Thr1","termid":"PBO:0089981"}


id: GO:0035337
data:
  {"annotated_genes":["SJAG_03909","SJAG_04007","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[109587,101751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006629","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"fatty-acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA metabolic process","type":"exact"},{"name":"fatty-acyl-CoA metabolism","type":"exact"}],"termid":"GO:0035337","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: PBO:0091247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh1","termid":"PBO:0091247"}


id: FYPO:0007011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA genes is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at ncRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at ncRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at ncRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at ncRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at non-coding RNA genes","type":"exact"}],"termid":"FYPO:0007011"}


id: GO:1901271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipooligosaccharide.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide biosynthetic process","synonyms":[{"name":"lipooligosaccharide anabolism","type":"exact"},{"name":"lipooligosaccharide biosynthesis","type":"exact"},{"name":"lipooligosaccharide formation","type":"exact"},{"name":"lipooligosaccharide synthesis","type":"exact"}],"termid":"GO:1901271"}


id: PBO:0065591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 7","termid":"PBO:0065591"}


id: SO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000554 assortment_derived_deficiency_plus_duplication (obsolete SO:0000554)","termid":"SO:0000554"}


id: GO:0098625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + CH3SeOH => NADP+ + CH3SeH + H2O.","definition_xrefs":["PMID:11782468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methylselenol reductase activity","secondary_identifiers":["Reactome:R-HSA-5263614"],"termid":"GO:0098625"}


id: PBO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 15 pseudogene","termid":"PBO:0062233"}


id: PBO:0026783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_synthesis_involved_in_mitotic_DNA_replication","termid":"PBO:0026783"}


id: PBO:0069649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 926, pseudogene","termid":"PBO:0069649"}


id: PBO:0055231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2658","termid":"PBO:0055231"}


id: PBO:0029668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_morphology","termid":"PBO:0029668"}


id: GO:0050764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phagocytosis, the process in which phagocytes engulf external particulate material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of phagocytosis","termid":"GO:0050764"}


id: GO:0061606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propionylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:dph","PMID:23043182","PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid propionylation","termid":"GO:0061606"}


id: GO:0102972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A12 + 2-oxoglutarate + O2 = gibberellin A110 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin A12,2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A110-forming)","secondary_identifiers":["MetaCyc:RXN-947"],"termid":"GO:0102972"}


id: PBO:0083161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene POL30","termid":"PBO:0083161"}


id: GO:0005604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen-containing extracellular matrix consisting of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.","definition_xrefs":["ISBN:0198547684","PMID:22505934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basement membrane","secondary_identifiers":["Wikipedia:Basement_membrane","GO:0008003","GO:0005605"],"synonyms":[{"name":"basal lamina","type":"related"},{"name":"basement lamina","type":"related"},{"name":"lamina densa","type":"related"}],"termid":"GO:0005604"}


id: GO:0085026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, symbiont-induced host-derived organelle that is comprised of multiple protein and lipid domains.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"extracellular non-membrane-bounded organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"tubovesicular membrane network","synonyms":[{"name":"TVM network","type":"exact"},{"name":"TVN","type":"exact"}],"termid":"GO:0085026"}


id: PBO:0047414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 5","termid":"PBO:0047414"}


id: PBO:0078889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 2-1","termid":"PBO:0078889"}


id: GO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid primary amide metabolic process","termid":"GO:0062126"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid primary amide catabolic process","synonyms":[{"name":"primary fatty amide catabolic process","type":"exact"}],"termid":"GO:0062127"}


id: PBO:0046398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 4A","termid":"PBO:0046398"}


id: PBO:0067523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 666, pseudogene","termid":"PBO:0067523"}


id: GO:0009103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ai","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide biosynthetic process","secondary_identifiers":["KEGG_PATHWAY:map00540"],"synonyms":[{"name":"LPS biosynthetic process","type":"exact"},{"name":"lipopolysaccharide anabolism","type":"exact"},{"name":"lipopolysaccharide biosynthesis","type":"exact"},{"name":"lipopolysaccharide formation","type":"exact"},{"name":"lipopolysaccharide synthesis","type":"exact"}],"termid":"GO:0009103"}


id: PBO:0046873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 3 member C2, pseudogene","termid":"PBO:0046873"}


id: GO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149","CL:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD4-positive, alpha beta T cell development","type":"related"},{"name":"CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043367"}


id: PBO:0036085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_double-strand_break_processing","termid":"PBO:0036085"}


id: PR:O60053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.01","synonyms":[{"name":"Spom972h-pof12","type":"exact"}],"termid":"PR:O60053"}


id: PBO:0110286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprin, Cpn1","termid":"PBO:0110286"}


id: PBO:0085562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing SH3-domains; involved in establishing cell polarity and morphogenesis; functions as a scaffold protein for complexes that include Cdc24p, Ste5p, Ste20p, and Rsr1p","termid":"PBO:0085562"}


id: PR:Q92376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkl1 gene.","definition_xrefs":["UniProtKB:Q92376","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.14c","synonyms":[{"name":"Spom972h-pkl1","type":"exact"}],"termid":"PR:Q92376"}


id: GO:0045282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind/react with quinones. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:kd","GOC:mtg_sensu","InterPro:IPR000701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase complex","termid":"GO:0045281"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respiratory chain complex II","termid":"GO:0045274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"plasma membrane succinate dehydrogenase complex","synonyms":[{"name":"succinate dehydrogenase complex","type":"broad"}],"termid":"GO:0045282"}


id: PBO:0031744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intracellular_transport","termid":"PBO:0031744"}


id: PBO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 2","termid":"PBO:0047510"}


id: GO:0097628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a distal tip cell.","definition_xrefs":["GOC:mm2","PMID:24968003","CL:0000661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tip cell migration","termid":"GO:0097628"}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["PMID:26473732","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: GO:0000110
data:
  {"annotated_genes":["SJAG_02828","SJAG_02334","SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106985,107580,114862],"is_not":false,"summary":null,"term":"GO:0000110"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses DNA damage recognition and endodeoxynuclease activities. In S. cerevisiae, it is composed of Rad1p, Rad10p, and Rad14p; in human the subunits are ERCC4/XPF, ERCC1 and XPA, respectively.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleotide-excision repair factor 1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NEF1 complex","type":"exact"},{"name":"XPA-ERCC1-ERCC4 complex","type":"exact"}],"termid":"GO:0000110","terms_by_termid":{"GO:0000110":null}}


id: PBO:0066464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2","termid":"PBO:0066464"}


id: PBO:0083479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1","termid":"PBO:0083479"}


id: PBO:0040478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1 like","termid":"PBO:0040478"}


id: GO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to an antigenic stimulus. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"},{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}


id: PBO:0067171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 225, pseudogene","termid":"PBO:0067171"}


id: PBO:0086022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0086022"}


id: PBO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as ncRNA","termid":"PBO:0000406"}


id: GO:0016676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor (obsolete GO:0016676)","secondary_identifiers":["EC:1.9.3.-"],"synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, oxygen as acceptor","type":"exact"}],"termid":"GO:0016676"}


id: GO:1904668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:vw","PMID:10921876","PMID:26216882","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ubiquitin-protein transferase activity","termid":"GO:0051443"},{"relation_name":"is_a","term_name":"regulation of ubiquitin protein ligase activity","termid":"GO:1904666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:0051488","GO:0007092","GO:1903835","GO:0090623"],"synonyms":[{"name":"activation of APC-Cdc20 complex activity","type":"narrow"},{"name":"activation of APC-fizzy related complex activity","type":"narrow"},{"name":"activation of E3","type":"related"},{"name":"activation of anaphase-promoting complex activity","type":"narrow"},{"name":"activation of protein ubiquitination activity","type":"narrow"},{"name":"activation of ubiquitin ligase activity","type":"narrow"},{"name":"activation of ubiquitin protein ligase activity","type":"narrow"},{"name":"positive regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"positive regulation of E3","type":"related"},{"name":"positive regulation of protein ubiquitination activity","type":"exact"},{"name":"positive regulation of ubiquitin ligase activity","type":"related"},{"name":"up regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up regulation of E3","type":"related"},{"name":"up regulation of protein ubiquitination activity","type":"exact"},{"name":"up regulation of ubiquitin ligase activity","type":"exact"},{"name":"up regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"up-regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up-regulation of E3","type":"related"},{"name":"up-regulation of protein ubiquitination activity","type":"exact"},{"name":"up-regulation of ubiquitin ligase activity","type":"exact"},{"name":"up-regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"upregulation of APC-fizzy related complex activity","type":"narrow"},{"name":"upregulation of E3","type":"related"},{"name":"upregulation of protein ubiquitination activity","type":"exact"},{"name":"upregulation of ubiquitin ligase activity","type":"exact"},{"name":"upregulation of ubiquitin protein ligase activity","type":"exact"}],"termid":"GO:1904668"}


id: GO:1902258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","PMID:16839542","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in outflow tract morphogenesis","termid":"GO:1902256"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in morphogenesis","termid":"GO:1902339"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"activation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in outflow tract morphogenesis","type":"narrow"},{"name":"positive regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1902258"}


id: PR:O94607
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- str2 gene.","definition_xrefs":["UniProtKB:O94607","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore iron transporter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.01c","synonyms":[{"name":"Spom972h-str2","type":"exact"}],"termid":"PR:O94607"}


id: PBO:0042665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 21","termid":"PBO:0042665"}


id: PBO:0073178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K","termid":"PBO:0073178"}


id: PBO:0083753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential cytoplasmic iron-sulfur cluster binding protein; forms a complex with Cfd1p that is involved in iron-sulfur protein assembly in the cytosol; similar to P-loop NTPases","termid":"PBO:0083753"}


id: GO:0102617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin B + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin B dependent) activity (obsolete GO:0102617)","termid":"GO:0102617"}


id: PBO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored cell surface protein involved in ascospore wall assembly Meu10","termid":"PBO:0005678"}


id: GO:0009199
data:
  {"annotated_genes":["SJAG_00964","SJAG_00685","SJAG_05024","SJAG_02564","SJAG_03373","SJAG_01298","SJAG_MIT09","SJAG_04334","SJAG_06622","SJAG_00461","SJAG_03903","SJAG_01471","SJAG_00839","SJAG_02038","SJAG_03828","SJAG_03676","SJAG_00633","SJAG_03660","SJAG_04849","SJAG_02105","SJAG_01310","SJAG_03114","SJAG_MIT37","SJAG_04422","SJAG_00605","SJAG_05204","SJAG_00533","SJAG_04192","SJAG_00438","SJAG_02369","SJAG_06621","SJAG_00412","SJAG_02009","SJAG_00133","SJAG_00027","SJAG_00136","SJAG_02887","SJAG_03852","SJAG_02135","SJAG_02598","SJAG_00542","SJAG_02945","SJAG_02107","SJAG_03708","SJAG_02796","SJAG_05314","SJAG_04122","SJAG_04495","SJAG_07003","SJAG_00915","SJAG_04048","SJAG_00836","SJAG_MIT15","SJAG_03925","SJAG_00985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[95076,92786,94302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[99545,101608,105563,91186,94439,90696,99804,100616,105098,105562,105565,105566,105567,112503,105097,105094,101607,101606,101972,105095,105096,105099,105100,105564,94167,105568,101973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[96221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[111064,89139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[100619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107740,94356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[96222,104437,98396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[72033,75077],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[66451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[97973,89027,104065,99195,91013,99844,85336,99815,101156,90048,104955,115158,111993,103975,89450,115167,115163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114117],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[102674,96223,89596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00412":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00964":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009199","terms_by_termid":{"GO:0006096":null,"GO:0006183":null,"GO:0006228":null,"GO:0006241":null,"GO:0015986":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:0045820":null,"GO:0046034":null,"GO:0046036":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905706":null}}


id: PATO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atretic","synonyms":[{"name":"atresia","type":"exact"}],"termid":"PATO:0001819"}


id: GO:0070199
data:
  {"annotated_genes":["SJAG_02761","SJAG_01297","SJAG_02336","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96543,104431,100064,114776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070199","terms_by_termid":{"GO:0140210":null}}


id: PBO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 2","termid":"PBO:0070978"}


id: SO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Similarity due to common ancestry.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous","termid":"SO:0000857"}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: PBO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripeptidyl-peptidase II Tpp2","termid":"PBO:0002929"}


id: PATO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's increased growth.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochronic growth","termid":"PATO:0001490"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peramorphic growth","synonyms":[{"name":"hyperplastic growth","type":"exact"}],"termid":"PATO:0001752"}


id: GO:0043413
data:
  {"annotated_genes":["SJAG_01264","SJAG_03676","SJAG_01021","SJAG_04090","SJAG_00437","SJAG_00394","SJAG_01491","SJAG_00890","SJAG_04906","SJAG_04316","SJAG_01006","SJAG_00747","SJAG_00334","SJAG_01389","SJAG_04363","SJAG_03082","SJAG_00816","SJAG_03656","SJAG_03311","SJAG_01972","SJAG_01276","SJAG_03032","SJAG_05348","SJAG_04770","SJAG_04952","SJAG_04053","SJAG_04401","SJAG_04095","SJAG_02996","SJAG_05219","SJAG_02903","SJAG_02163","SJAG_00554","SJAG_02056","SJAG_03188","SJAG_03280","SJAG_00598","SJAG_03764","SJAG_04231","SJAG_02648","SJAG_03056","SJAG_04954","SJAG_03555","SJAG_00831","SJAG_00183","SJAG_04821","SJAG_01950","SJAG_03150","SJAG_01595","SJAG_03535","SJAG_00924","SJAG_04127","SJAG_03871","SJAG_03330","SJAG_02102","SJAG_02783","SJAG_03774","SJAG_01069","SJAG_04571","SJAG_02519","SJAG_04728","SJAG_03149","SJAG_03333","SJAG_03790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102111,89204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044845"},{"annotations":[94513,112888,105460,96140,90077,98454,83730,94566,96157,87310,94847,92596,108721,99731,107250,101152,86575],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[110126,99247,113942,112236,104553,104179,91888,109932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[114627,94058,114482,83732,96141,96917,100662,105189,94919,89326,106883,108864,114159,97497,94921,94928,94939,113441,99934,102112,93952,102878,85414,98724,105462,96177,99732,94920,94940,89324,89325,89327,94942,96484,95084,98945,101100,83604,101215,107074,94918,94941,98872,106877,95935,95798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[105463,97506,107251,109933,112992,91499,98725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[94929,106884,114160,102113,98873,106878,101915,96918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[89205,102879,97695,100243,100663,92598,99935,114483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment of a glycosyl residue to one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"},{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00890":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule glycosylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043413","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null,"GO:0044845":null}}


id: PBO:0091758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper exporter Ctr6","termid":"PBO:0091758"}


id: PBO:0055740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 alpha","termid":"PBO:0055740"}


id: GO:0014016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroblast. There are at least four stages through which the pluripotent cells of epiblast or blastula become neuroblasts.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast differentiation","termid":"GO:0014016"}


id: PR:Q9UUB6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase isozyme L5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10589:SF16","OMA:SCHPO02737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Uch2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.06","secondary_identifiers":["UniProtKB:Q9UUB6"],"synonyms":[{"name":"SPBC409.06","type":"related"},{"name":"Spom972h-UCHL5","type":"exact"}],"termid":"PR:Q9UUB6"}


id: GO:0007107
data:
  {"annotated_genes":["SJAG_04358","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87471,95913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"}]},"cv_name":"biological_process","definition":"Any process involved in the net addition of membrane at the site of cytokinesis; includes vesicle recruitment and fusion, local lipid synthesis and insertion.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03915":null,"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"membrane addition at site of cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytokinesis, membrane recruitment/generation","type":"exact"}],"termid":"GO:0007107","terms_by_termid":{"GO:0061796":null}}


id: PBO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.16","termid":"PBO:0001174"}


id: GO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated by tyrosine phosphorylation events.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IA (obsolete GO:0004432)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA","type":"exact"}],"termid":"GO:0004432"}


id: PBO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjeF family pyridoxamine-phosphate oxidase (predicted)","termid":"PBO:0002178"}


id: GO:0071586
data:
  {"annotated_genes":["SJAG_00730","SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85765,93513],"is_not":false,"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"CAAX-box protein maturation","termid":"GO:0080120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"CAAX-box protein processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071586","terms_by_termid":{"GO:0071586":null}}


id: PBO:0053842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1108","termid":"PBO:0053842"}


id: PBO:0075868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 8","termid":"PBO:0075868"}


id: PBO:0042439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 binding protein kinase beta","termid":"PBO:0042439"}


id: PBO:0056517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 4","termid":"PBO:0056517"}


id: PBO:0046598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 8","termid":"PBO:0046598"}


id: PBO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 2","termid":"PBO:0070864"}


id: GO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell tolerance induction","termid":"GO:0002666"},{"relation_name":"is_a","term_name":"regulation of T cell anergy","termid":"GO:0002667"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell anergy","synonyms":[{"name":"activation of T cell anergy","type":"narrow"},{"name":"positive regulation of T lymphocyte anergy","type":"exact"},{"name":"positive regulation of T-cell anergy","type":"exact"},{"name":"positive regulation of T-lymphocyte anergy","type":"exact"},{"name":"stimulation of T cell anergy","type":"narrow"},{"name":"up regulation of T cell anergy","type":"exact"},{"name":"up-regulation of T cell anergy","type":"exact"},{"name":"upregulation of T cell anergy","type":"exact"}],"termid":"GO:0002669"}


id: PBO:0049048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 39","termid":"PBO:0049048"}


id: PBO:0032704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0032704"}


id: PBO:0058331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4705","termid":"PBO:0058331"}


id: PBO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VIII alpha 1 chain","termid":"PBO:0043571"}


id: PBO:0053773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1018","termid":"PBO:0053773"}


id: FYPO:0001026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs is abnormal (does not occur, or occurs abnormally).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}


id: PBO:0044863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 1A","termid":"PBO:0044863"}


id: GO:0006693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid metabolic process","termid":"GO:0006692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"prostaglandin metabolic process","synonyms":[{"name":"prostaglandin metabolism","type":"exact"}],"termid":"GO:0006693"}


id: PBO:0089476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase beta subunit Frs1","termid":"PBO:0089476"}


id: PBO:0041361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 binding protein beta","termid":"PBO:0041361"}


id: PBO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein Ugo1 (predicted)","termid":"PBO:0001743"}


id: PBO:0062757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 2","termid":"PBO:0062757"}


id: GO:0048892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line nerve over time, form its formation to the mature structure. Lateral line nerves project primarily to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve development","synonyms":[{"name":"nLL development","type":"exact"}],"termid":"GO:0048892"}


id: PBO:0083797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for maturation of Gas1p and Pho8p; involved in protein trafficking; GFP-fusion protein localizes to the ER and YFP-fusion protein to the nuclear envelope-ER network; null mutants have a cell separation defect","termid":"PBO:0083797"}


id: PR:000050503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOG/XMAP215 microtubule plus end tracking polymerase Dis1 that has been phosphorylated at the positions equivalent to Thr-279, Ser-293, Ser-300, Ser-551, Ser-556, and Ser-590 of the amino acid sequence represented by UniProtKB:Q09933. Example: UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046.","definition_xrefs":["PMID:16920624","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","termid":"PR:000050502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom-dis1/Phos:1","type":"exact"},{"name":"UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046","type":"narrow"},{"name":"dis1/Phos(T279,S293,S300,S551,S556,S590)","type":"exact"}],"termid":"PR:000050503"}


id: GO:1901565
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id: GO:0000279
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id: FYPO:0003219
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id: GO:0034202
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id: FYPO:0000135
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id: RO:0002335
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id: GO:0046528
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id: PBO:0087278
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id: PBO:0045761
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethylmalonyl-CoA decarboxylase 1","termid":"PBO:0045761"}


id: PBO:0069834
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1120, pseudogene","termid":"PBO:0069834"}


id: PBO:0063540
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet endothelial aggregation receptor 1","termid":"PBO:0063540"}


id: PBO:0031175
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id: RO:0002206
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id: PBO:0051930
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 2","termid":"PBO:0051930"}


id: MOD:01667
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with epicocconone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"epicocconone derivatized residue","termid":"MOD:01666"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-epicoccononyl lysine adduct","synonyms":[{"name":"(6Z,7aS)-3-[(1Z,4E,6E,8E)-1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl]-7a-methyl-6-[([(1S)-1-amino-1-carboxylpentyl]amino)methylidene]-5-[(2S)-2,3-dihydroxypropyl]-1-benzofuran-2,7(6H,7aH)-dione","type":"exact"},{"name":"DeepPurple","type":"exact"},{"name":"LavaPurple","type":"exact"},{"name":"Lightning Fast","type":"exact"}],"termid":"MOD:01667"}


id: PBO:0066695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 1","termid":"PBO:0066695"}


id: PBO:0091392
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, LTR proximal","termid":"PBO:0091392"}


id: PBO:0028679
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_subtelomeric_heterochromatin","termid":"PBO:0028679"}


id: PBO:0082866
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm F; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm F","termid":"PBO:0082866"}


id: PBO:0072241
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 16","termid":"PBO:0072241"}


id: PBO:0073643
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id: FYPO:0006416
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id: PBO:0052503
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 15","termid":"PBO:0052503"}


id: PBO:0056412
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 9","termid":"PBO:0056412"}


id: PBO:0000203
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine 5'-nucleotidase (predicted)","termid":"PBO:0000203"}


id: PATO:0000553
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000553 relative temperature sensitivity value (obsolete PATO:0000553)","termid":"PATO:0000553"}


id: PBO:0026986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_membrane_cardiolipin_level","termid":"PBO:0026986"}


id: PR:O74879
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14927:SF0","OMA:SCHPO04196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein enp2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.09","secondary_identifiers":["UniProtKB:O74879"],"synonyms":[{"name":"Spom972h-NOL10","type":"exact"}],"termid":"PR:O74879"}


id: GO:2000341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:0035926","GO:1904207"],"synonyms":[{"name":"chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"regulation of CCL2 secretion","type":"narrow"},{"name":"regulation of CXCL2 production","type":"exact"},{"name":"regulation of MIP-2 production","type":"exact"},{"name":"regulation of MIP2 production","type":"exact"},{"name":"regulation of SCYB2 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000341"}


id: PBO:0047508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fer3 like bHLH transcription factor","termid":"PBO:0047508"}


id: FYPO:0006793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the specificity between a meiotic driver gene and a drive suppressor gene differs from that observed when both genes are wild type. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PomBase:mah","PMID:30475921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered meiotic drive suppression specificity","synonyms":[{"name":"abnormal meiotic drive suppression specificity","type":"exact"},{"name":"abnormal specificity of suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006793"}


id: PBO:0043504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3B","termid":"PBO:0043504"}


id: SO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two H-bonds in which: Residue(i) is Aspartate or Asparagine (Asx), side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2) or (i+3), main-chain CO of residue(i) is H-bonded to the main-chain NH of residue(i+3) or (i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_motif","secondary_identifiers":["BS:00202"],"synonyms":[{"name":"asx motif","type":"exact"}],"termid":"SO:0001106"}


id: PR:Q9P7G5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7G5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein bos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP14E8.03","synonyms":[{"name":"Spom972h-bos1","type":"exact"}],"termid":"PR:Q9P7G5"}


id: GO:0036005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:yaf","PMID:14687666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to macrophage colony-stimulating factor","synonyms":[{"name":"response to M-CSF","type":"exact"},{"name":"response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:0036005"}


id: PBO:0049275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSK3B interacting protein","termid":"PBO:0049275"}


id: GO:0010144
data:
  {"annotated_genes":["SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107994],"is_not":false,"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, the active form of vitamin B6, from pyridoxamine.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal 5'-phosphate salvage","termid":"GO:0009443"},{"relation_name":"is_a","term_name":"pyridoxamine metabolic process","termid":"GO:0042818"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pyridoxal phosphate biosynthetic process from pyridoxamine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal 5'-phosphate salvage from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate anabolism from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate formation from pyridoxamine","type":"exact"},{"name":"pyridoxal phosphate synthesis from pyridoxamine","type":"exact"},{"name":"vitamin B6 biosynthesis from pyridoxamine","type":"exact"},{"name":"vitamin B6 biosynthetic process from pyridoxamine","type":"exact"}],"termid":"GO:0010144","terms_by_termid":{"GO:0010144":null}}


id: GO:0099151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynaptic density assembly","termid":"GO:0099151"}


id: PBO:0087028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication","termid":"PBO:0087028"}


id: GO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of peptidoglycan to a receptor and ending with regulation of a downstream cellular process. The main outcome of the Imd signaling is the production of antimicrobial peptides.","definition_xrefs":["GOC:dph","PMID:24706930","PMID:18688280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"Imd signaling pathway","type":"exact"},{"name":"Imd signalling pathway","type":"exact"},{"name":"PGRP signaling pathway","type":"related"},{"name":"immune deficiency pathway","type":"related"},{"name":"immune deficiency signaling pathway","type":"related"}],"termid":"GO:0061057"}


id: GO:0102930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + 4-hydroxybenzoic acid = 3-geranyl-4-hydroxybenzoate + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:27854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate geranyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8920","EC:2.5.1.93"],"termid":"GO:0102930"}


id: PR:O14354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgm101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial genome maintenance protein mgm101 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.08","synonyms":[{"name":"Spom972h-mgm101","type":"exact"}],"termid":"PR:O14354"}


id: GO:0045180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane on the basal edge of a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"basal cortex","termid":"GO:0045180"}


id: FYPO:0002219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation, or disjunction, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromosome disjunction at meiosis I","synonyms":[{"name":"normal chromosome disjunction at first meiotic nuclear division","type":"exact"},{"name":"normal homologous chromosome segregation","type":"exact"}],"termid":"FYPO:0002219"}


id: GO:0035023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rho protein signal transduction","termid":"GO:0035023"}


id: PR:Q9P7K0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04500","PANTHER:PTHR10898:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.05","secondary_identifiers":["UniProtKB:Q9P7K0"],"synonyms":[{"name":"Spom972h-TIMM9","type":"exact"}],"termid":"PR:Q9P7K0"}


id: GO:0060710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell-cell adhesion process in which the cells of the chorion fuse to the cells of the allantois.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"chorio-allantoic fusion","termid":"GO:0060710"}


id: PBO:0084272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localizes primarily to growing sites such as the bud tip or the cell periphery; potential Cdc28p substrate; Skg6p interacts with Zds1p and Zds2p; SKG6 has a paralog, TOS2, that arose from the whole genome duplication","termid":"PBO:0084272"}


id: GO:1904743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","GOC:BHF","GOC:TermGenie","GO_REF:0000059","PMID:24415760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomeric DNA binding","synonyms":[{"name":"down regulation of telomere binding","type":"exact"},{"name":"down regulation of telomeric DNA binding","type":"exact"},{"name":"down regulation of telomeric repeat binding","type":"exact"},{"name":"down-regulation of telomere binding","type":"exact"},{"name":"down-regulation of telomeric DNA binding","type":"exact"},{"name":"down-regulation of telomeric repeat binding","type":"exact"},{"name":"downregulation of telomere binding","type":"exact"},{"name":"downregulation of telomeric DNA binding","type":"exact"},{"name":"downregulation of telomeric repeat binding","type":"exact"},{"name":"inhibition of telomere binding","type":"narrow"},{"name":"inhibition of telomeric DNA binding","type":"narrow"},{"name":"inhibition of telomeric repeat binding","type":"narrow"},{"name":"negative regulation of telomere binding","type":"exact"},{"name":"negative regulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904743"}


id: GO:1904759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an equatorial microtubule organizing center.","definition_xrefs":["GOC:TermGenie","PMID:16611237","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to equatorial microtubule organizing center","synonyms":[{"name":"protein localisation in equatorial microtubule organizing center","type":"exact"},{"name":"protein localisation to equatorial microtubule organizing center","type":"exact"},{"name":"protein localization in equatorial microtubule organizing center","type":"exact"},{"name":"protein localization to eMTOC","type":"exact"}],"termid":"GO:1904759"}


id: FYPO:0000961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on sorbitol","synonyms":[{"name":"normal cell population growth in presence of sorbitol","type":"exact"},{"name":"normal cell population growth on glucitol","type":"exact"},{"name":"normal cell population growth on sorbitol","type":"exact"},{"name":"normal cellular response to sorbitol","type":"related"},{"name":"normal vegetative cell population growth on sorbitol","type":"exact"}],"termid":"FYPO:0000961"}


id: PBO:0111904
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD3 domain","termid":"PBO:0111904"}


id: PBO:0084817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; required for respiratory growth; mutant accumulates less glycogen than does wild type; null mutation results in a decrease in plasma membrane electron transport; YIL060W is not an essential gene","termid":"PBO:0084817"}


id: PBO:0041007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 8","termid":"PBO:0041007"}


id: FYPO:0006614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II occurs to a greater extent than normal. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PomBase:mah","GO:0006369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"},{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased termination of RNA polymerase II transcription","synonyms":[{"name":"increased RNA polymerase II transcription termination","type":"exact"},{"name":"increased termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"increased termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0006614"}


id: GO:1900998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitrobenzene.","definition_xrefs":["UniPathway:UPA00923","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrobenzene metabolic process","termid":"GO:0018916"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrobenzene catabolic process","synonyms":[{"name":"nitrobenzene breakdown","type":"exact"},{"name":"nitrobenzene catabolism","type":"exact"},{"name":"nitrobenzene degradation","type":"exact"}],"termid":"GO:1900998"}


