# terms

id: GO:0071742
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgE immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgE immunoglobulin complex","termid":"GO:0071742"}


id: GO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of neurotransmitter secretion","synonyms":[{"name":"activation of neurotransmitter secretion","type":"narrow"},{"name":"stimulation of neurotransmitter secretion","type":"narrow"},{"name":"up regulation of neurotransmitter secretion","type":"exact"},{"name":"up-regulation of neurotransmitter secretion","type":"exact"},{"name":"upregulation of neurotransmitter secretion","type":"exact"}],"termid":"GO:0001956"}


id: PBO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner nuclear membrane protein Ima1","termid":"PBO:0018192"}


id: GO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral whorl are generated and organized.","definition_xrefs":["GOC:go_curators","PO:0025023","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"floral whorl development","termid":"GO:0048438"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl morphogenesis","secondary_identifiers":["GO:0048414"],"termid":"GO:0048457"}


id: PBO:0017676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transmembrane transporter Trk1","termid":"PBO:0017676"}


id: PBO:0003596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin binding repeats","termid":"PBO:0003596"}


id: PBO:0074963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-5","termid":"PBO:0074963"}


id: PBO:0048576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl diphosphate synthase 1","termid":"PBO:0048576"}


id: GO:0043301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of leukocyte degranulation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"negative regulation of regulated secretory pathway","termid":"GO:1903306"},{"relation_name":"negatively_regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte degranulation","synonyms":[{"name":"down regulation of leukocyte degranulation","type":"exact"},{"name":"down-regulation of leukocyte degranulation","type":"exact"},{"name":"downregulation of leukocyte degranulation","type":"exact"},{"name":"inhibition of leukocyte degranulation","type":"narrow"},{"name":"negative regulation of immune cell degranulation","type":"exact"},{"name":"negative regulation of leucocyte degranulation","type":"exact"}],"termid":"GO:0043301"}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: PBO:0030348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030348"}


id: PBO:0036541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin, Mdn1","termid":"PBO:0036541"}


id: FYPO:0004812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at sites in ribosomal DNA (rDNA) is abnormal.","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at rDNA","synonyms":[{"name":"abnormal RNA polymerase II release at rDNA","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at rDNA","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at rDNA during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at rDNA during vegetative growth","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at ribosomal DNA","type":"related"}],"termid":"FYPO:0004812"}


id: GO:1905622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leaf development.","definition_xrefs":["GO_REF:0000058","PMID:11606552","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"negatively_regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leaf development","synonyms":[{"name":"down regulation of leaf development","type":"exact"},{"name":"down-regulation of leaf development","type":"exact"},{"name":"downregulation of leaf development","type":"exact"},{"name":"inhibition of leaf development","type":"narrow"}],"termid":"GO:1905622"}


id: PBO:0062294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 5 pseudogene","termid":"PBO:0062294"}


id: PBO:0083097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-responsive protein; expression is increased in response to heat-shock stress or treatments that produce DNA lesions; contains multiple repeats of the amino acid sequence NNNDSYGS; protein abundance increases in response to DNA replication stress","termid":"PBO:0083097"}


id: GO:0008798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a beta-linked aspartic residue from the N-terminus of a polypeptide.","definition_xrefs":["EC:3.4.19.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"beta-aspartyl-peptidase activity","secondary_identifiers":["MetaCyc:3.4.19.5-RXN","Reactome:R-HSA-5692495","Reactome:R-HSA-5696365"],"synonyms":[{"name":"beta-aspartyl dipeptidase activity","type":"related"},{"name":"beta-aspartyl peptidase activity","type":"related"}],"termid":"GO:0008798"}


id: GO:0106040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of GABA-A receptor activity","termid":"GO:0106040"}


id: PBO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA (predicted)","termid":"PBO:0000090"}


id: PBO:0030422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sterol_binding","termid":"PBO:0030422"}


id: GO:0070722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that consists of a heterodimer of the proteins Tle3 (also known as Grg3b) and Aes (Grg5), which are homologs of the Drosophila groucho gene product.","definition_xrefs":["GOC:mah","PMID:8955148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Tle3-Aes complex","synonyms":[{"name":"Grg3b-Grg5 complex","type":"exact"}],"termid":"GO:0070722"}


id: GO:1903191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glyoxal.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000068","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyoxal biosynthetic process","synonyms":[{"name":"glyoxal anabolism","type":"exact"},{"name":"glyoxal biosynthesis","type":"exact"},{"name":"glyoxal formation","type":"exact"},{"name":"glyoxal synthesis","type":"exact"}],"termid":"GO:1903191"}


id: GO:0035226
data:
  {"annotated_genes":["SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66808],"is_not":false,"summary":null,"term":"GO:0035226"}]},"cv_name":"molecular_function","definition":"Binding to the catalytic subunit of glutamate-cysteine ligase.","definition_xrefs":["PMID:12954617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"glutamate-cysteine ligase catalytic subunit binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0035226","terms_by_termid":{"GO:0035226":null}}


id: PBO:0063613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4","termid":"PBO:0063613"}


id: GO:0102407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: C22:0-DCA-CoA + sn-glycerol 3-phosphate = coenzyme A + 2-C22:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C22:0-DCA-CoA acyl transferase activity (obsolete GO:0102407)","termid":"GO:0102407"}


id: PBO:0047026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A1","termid":"PBO:0047026"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: antheraxanthin = capsanthin.","definition_xrefs":["EC:5.3.99.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["MetaCyc:RXN-7947","RHEA:17373"],"synonyms":[{"name":"CCS","type":"related"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: PBO:0089472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIP family cytoskeletal protein Bbc1","termid":"PBO:0089472"}


id: PBO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1 pseudogene 3","termid":"PBO:0051633"}


id: PBO:0081455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 322","termid":"PBO:0081455"}


id: PBO:0030922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase","termid":"PBO:0030922"}


id: GO:0045599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of fat cell differentiation","termid":"GO:0045598"},{"relation_name":"negatively_regulates","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell differentiation","synonyms":[{"name":"down regulation of fat cell differentiation","type":"exact"},{"name":"down-regulation of fat cell differentiation","type":"exact"},{"name":"downregulation of fat cell differentiation","type":"exact"},{"name":"inhibition of fat cell differentiation","type":"narrow"},{"name":"negative regulation of adipocyte cell differentiation","type":"exact"},{"name":"negative regulation of adipocyte differentiation","type":"exact"}],"termid":"GO:0045599"}


id: PBO:0059381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 6","termid":"PBO:0059381"}


id: MOD:01754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01754"}


id: PBO:0003655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"InVasioN defective","termid":"PBO:0003655"}


id: PBO:0004095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF assembly factor (CAF-1) complex large subunit Pcf1","termid":"PBO:0004095"}


id: PBO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_duplication","termid":"PBO:0030416"}


id: GO:0098868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a bone that contributes to the shaping of that bone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone growth","termid":"GO:0098868"}


id: PBO:0091695
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Knockout","termid":"PBO:0091695"}


id: PR:O74443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.13","synonyms":[{"name":"Spom972h-laf2","type":"exact"},{"name":"clr6 L-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74443"}


id: GO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005575","GO:0005730","GO:0005634"],"is_obsolete":false,"name":"fibrillar center","synonyms":[{"name":"fibrillar centre","type":"exact"}],"termid":"GO:0001650"}


id: PBO:0073797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 4","termid":"PBO:0073797"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: PBO:0087170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II largest subunit B220; part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime","termid":"PBO:0087170"}


id: PBO:0043335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN3 lysosomal/endosomal transmembrane protein, battenin","termid":"PBO:0043335"}


id: GO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the clypeus over time, from its formation to the mature structure. The clypeus is the shield-shaped plate on an insect's head.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus development","termid":"GO:0048723"}


id: PBO:0011085
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, thiamine Km 6 uM","termid":"PBO:0011085"}


id: PBO:0039915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 15","termid":"PBO:0039915"}


id: PBO:0005349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S37 (predicted)","termid":"PBO:0005349"}


id: PBO:0059848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1","termid":"PBO:0059848"}


id: PBO:0061570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal glutamine amidase 1","termid":"PBO:0061570"}


id: GO:0009555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.","definition_xrefs":["GOC:mtg_sensu","GOC:mtg_plant","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen development","secondary_identifiers":["GO:0009564","GO:0048231"],"synonyms":[{"name":"formation of generative and vegetative cells","type":"exact"},{"name":"male gametophyte development","type":"exact"},{"name":"male gametophyte formation","type":"exact"},{"name":"microgametophyte development","type":"exact"},{"name":"pollen grain formation","type":"exact"}],"termid":"GO:0009555"}


id: PBO:0035913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_medial_membrane_band_assembly","termid":"PBO:0035913"}


id: PBO:0001389
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome","termid":"PBO:0001389"}


id: GO:0006277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the number of copies of a gene is increased in certain cells as extra copies of DNA are made in response to certain signals of cell development or of stress from the environment.","definition_xrefs":["ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA amplification","termid":"GO:0006277"}


id: PR:O59773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vid21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein vid21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.08c","synonyms":[{"name":"Spom972h-vid21","type":"exact"},{"name":"esa1-associated factor vid21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar import and degradation protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59773"}


id: FYPO:0000141
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115685,115687,115686],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation is abnormal. Mitotic sister chromatid segregation is the entire process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle.","definition_xrefs":["GO:0000070","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"part_of","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation","references_by_uniquename":{"PMID:24184107":null},"secondary_identifiers":["FYPO:0001359"],"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal chromosome segregation during vegetative growth","type":"exact"},{"name":"abnormal mitotic chromosome segregation","type":"exact"},{"name":"abnormal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation during mitotic cell cycle","type":"related"},{"name":"centromere function defective during vegetative growth","type":"related"},{"name":"chromosome segregation defects during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, mitotic","type":"exact"},{"name":"mitotic chromosome missegregation","type":"related"},{"name":"mitotic sister chromatid missegregation","type":"related"}],"termid":"FYPO:0000141","terms_by_termid":{"FYPO:0000671":null}}


id: PBO:0027632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere","termid":"PBO:0027632"}


id: PBO:0064461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 2, accessory subunit","termid":"PBO:0064461"}


id: PBO:0026701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glutamine_nitrogen_source","termid":"PBO:0026701"}


id: PBO:0046134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF5 divergent transcript","termid":"PBO:0046134"}


id: PR:O74735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal homeostasis factor atx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.10c","synonyms":[{"name":"Spom972h-atx1","type":"exact"}],"termid":"PR:O74735"}


id: PBO:0057203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374b","termid":"PBO:0057203"}


id: PBO:0073311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A","termid":"PBO:0073311"}


id: PBO:0071132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 134","termid":"PBO:0071132"}


id: PBO:0078619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM67 antisense RNA 1","termid":"PBO:0078619"}


id: GO:0005096
data:
  {"annotated_genes":["SJAG_02666","SJAG_01011","SJAG_03655","SJAG_00092","SJAG_04284","SJAG_04400","SJAG_04391","SJAG_04910","SJAG_02765","SJAG_00467","SJAG_01184","SJAG_00028","SJAG_02231","SJAG_04074","SJAG_00289","SJAG_03836","SJAG_03748","SJAG_04733","SJAG_02539","SJAG_01526","SJAG_01114","SJAG_04938","SJAG_00551","SJAG_03338","SJAG_02277","SJAG_04462","SJAG_00824","SJAG_00991","SJAG_01386","SJAG_04498","SJAG_01600","SJAG_02520","SJAG_04013","SJAG_04765","SJAG_02012","SJAG_04548","SJAG_03268","SJAG_04615","SJAG_04724","SJAG_03021","SJAG_04080","SJAG_04776","SJAG_04522","SJAG_04943","SJAG_02390","SJAG_03153","SJAG_05346","SJAG_02278","SJAG_00990","SJAG_02379","SJAG_00864","SJAG_03085","SJAG_01048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64068,64985,69882,83766,84693,85437,87443,89019,89338,89339,89400,89496,89504,90154,90347,90348,91111,91118,91204,91593,92046,92276,92729,94208,94232,95005,95042,95822,96493,98607,101212,101319,101440,101497,101562,102629,103011,103206,103309,103562,103780,105595,105767,106280,107017,107125,107529,107620,108145,110405,111150,112193,112748,113265,113860],"is_not":false,"summary":null,"term":"GO:0005096"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00092":null,"SJAG_00289":null,"SJAG_00467":null,"SJAG_00551":null,"SJAG_00824":null,"SJAG_00864":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01011":null,"SJAG_01048":null,"SJAG_01114":null,"SJAG_01184":null,"SJAG_01386":null,"SJAG_01526":null,"SJAG_01600":null,"SJAG_02012":null,"SJAG_02231":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02379":null,"SJAG_02390":null,"SJAG_02520":null,"SJAG_02539":null,"SJAG_02666":null,"SJAG_02765":null,"SJAG_03021":null,"SJAG_03085":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03655":null,"SJAG_03748":null,"SJAG_03836":null,"SJAG_04013":null,"SJAG_04074":null,"SJAG_04080":null,"SJAG_04284":null,"SJAG_04391":null,"SJAG_04400":null,"SJAG_04462":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04548":null,"SJAG_04615":null,"SJAG_04724":null,"SJAG_04733":null,"SJAG_04765":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_04938":null,"SJAG_04943":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"GTPase activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9018745","Reactome:R-HSA-428533","Reactome:R-HSA-9013161","GO:0046582","Reactome:R-HSA-9013111","Reactome:R-HSA-416546","Reactome:R-HSA-8981637","Reactome:R-HSA-9014295","Reactome:R-HSA-9017488","GO:0005097","Reactome:R-HSA-8985594","Reactome:R-HSA-9014434","Reactome:R-HSA-5638007","Reactome:R-HSA-9624893","Reactome:R-HSA-9693282","GO:0005098","GO:0005099","Reactome:R-HSA-4093339","Reactome:R-HSA-392513","Reactome:R-HSA-399935","GO:0005100","GO:0017123","GO:0030675","GO:0008060","Reactome:R-HSA-9013437","GO:0005101","Reactome:R-HSA-9013022","Reactome:R-HSA-416559","Reactome:R-HSA-428522","Reactome:R-HSA-9018806","Reactome:R-HSA-9013144"],"synonyms":[{"name":"ARF GAP activity","type":"narrow"},{"name":"ARF GTPase activator activity","type":"narrow"},{"name":"GAP activity","type":"exact"},{"name":"Rab GAP activity","type":"narrow"},{"name":"Rab GTPase activator activity","type":"narrow"},{"name":"Rac GAP activity","type":"narrow"},{"name":"Rac GTPase activator activity","type":"narrow"},{"name":"Ral GAP activity","type":"narrow"},{"name":"Ral GTPase activator activity","type":"narrow"},{"name":"Ran GAP activity","type":"narrow"},{"name":"Ran GTPase activator activity","type":"narrow"},{"name":"RanGAP","type":"narrow"},{"name":"Rap GAP activity","type":"narrow"},{"name":"Rap GTPase activator activity","type":"narrow"},{"name":"Ras GAP activity","type":"narrow"},{"name":"Ras GTPase activator activity","type":"narrow"},{"name":"Rho GAP activity","type":"narrow"},{"name":"Rho GTPase activator activity","type":"narrow"},{"name":"Sar GAP activity","type":"narrow"},{"name":"Sar GTPase activator activity","type":"narrow"}],"termid":"GO:0005096","terms_by_termid":{"GO:0005096":null}}


id: GO:0030651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic biosynthetic process","synonyms":[{"name":"peptide antibiotic anabolism","type":"exact"},{"name":"peptide antibiotic biosynthesis","type":"exact"},{"name":"peptide antibiotic formation","type":"exact"},{"name":"peptide antibiotic synthesis","type":"exact"}],"termid":"GO:0030651"}


id: PBO:0028040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_equatorial_microtubule_organizing_center_absent_from_cell","termid":"PBO:0028040"}


id: GO:0075331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"is_a","term_name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"},{"relation_name":"negatively_regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075331"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: PBO:0056607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelodysplastic syndrome 2 translocation associated","termid":"PBO:0056607"}


id: GO:1900425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defense response to bacterium.","definition_xrefs":["PMID:22346749","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to bacterium","termid":"GO:1900424"},{"relation_name":"negatively_regulates","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to bacterium","secondary_identifiers":["GO:1902478"],"synonyms":[{"name":"down regulation of antibacterial peptide activity","type":"related"},{"name":"down regulation of defence response to bacteria","type":"exact"},{"name":"down regulation of defence response to bacterium","type":"exact"},{"name":"down regulation of defense response to bacteria","type":"exact"},{"name":"down regulation of defense response to bacterium","type":"exact"},{"name":"down-regulation of antibacterial peptide activity","type":"related"},{"name":"down-regulation of defence response to bacteria","type":"exact"},{"name":"down-regulation of defence response to bacterium","type":"exact"},{"name":"down-regulation of defense response to bacteria","type":"exact"},{"name":"down-regulation of defense response to bacterium","type":"exact"},{"name":"downregulation of antibacterial peptide activity","type":"related"},{"name":"downregulation of defence response to bacteria","type":"exact"},{"name":"downregulation of defence response to bacterium","type":"exact"},{"name":"downregulation of defense response to bacteria","type":"exact"},{"name":"downregulation of defense response to bacterium","type":"exact"},{"name":"inhibition of antibacterial peptide activity","type":"related"},{"name":"inhibition of defence response to bacteria","type":"exact"},{"name":"inhibition of defence response to bacterium","type":"exact"},{"name":"inhibition of defence response to pathogenic bacteria, incompatible interaction","type":"narrow"},{"name":"inhibition of defence response to pathogenic bacterium, incompatible interaction","type":"narrow"},{"name":"inhibition of defense response to bacteria","type":"exact"},{"name":"inhibition of defense response to bacterium","type":"narrow"},{"name":"inhibition of defense response to bacterium, incompatible interaction","type":"narrow"},{"name":"inhibition of resistance response to pathogenic bacteria","type":"narrow"},{"name":"inhibition of resistance response to pathogenic bacterium","type":"narrow"},{"name":"inhibition of response to pathogenic bacteria (incompatible interaction)","type":"narrow"},{"name":"inhibition of response to pathogenic bacterium (incompatible interaction)","type":"narrow"},{"name":"negative regulation of antibacterial peptide activity","type":"related"},{"name":"negative regulation of defence response to bacteria","type":"exact"},{"name":"negative regulation of defence response to bacterium","type":"exact"},{"name":"negative regulation of defense response to bacteria","type":"exact"},{"name":"negative regulation of defense response to bacterium, incompatible interaction","type":"narrow"}],"termid":"GO:1900425"}


id: PR:Q9P6J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1683.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.12","synonyms":[{"name":"Spom972h-SPBC1683.12","type":"exact"}],"termid":"PR:Q9P6J0"}


id: PBO:0003449
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.71","termid":"PBO:0003449"}


id: GO:0003773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any of a group of specific proteins that are synthesized by both prokaryotic and eukaryotic cells after they have been exposed to a temperature that is higher than normal. Other stresses, e.g. free radical damage, have a similar effect. Many members of the hsp family are not induced but are present in all cells. They are characterized by their role as molecular chaperones.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heat shock protein activity (obsolete GO:0003773)","synonyms":[{"name":"heat shock protein activity","type":"exact"}],"termid":"GO:0003773"}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111725],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: PBO:0069706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 986, pseudogene","termid":"PBO:0069706"}


id: PBO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 pseudogene 1","termid":"PBO:0045051"}


id: GO:0031119
data:
  {"annotated_genes":["SJAG_04065","SJAG_01054","SJAG_02978","SJAG_03572","SJAG_00319","SJAG_01172","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87389,90831,98648,102382,108654,110453,113298],"is_not":false,"summary":null,"term":"GO:0031119"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01054":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031119","terms_by_termid":{"GO:0031119":null}}


id: GO:0043134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:jl","UBERON:0001046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hindgut contraction","termid":"GO:0043134"}


id: PBO:0086955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of mitochondrial proline metabolism; tethered with Put7p to inner mitochondrial membrane in large hetero-oligomeric complex, abundance of which is regulated by proline; involved in mitochondrial proline homeostasis and cellular redox balance; null exhibits pronounced defect in proline utilization, and can be functionally complemented by expression of human homolog MCUR1","termid":"PBO:0086955"}


id: PBO:0051871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily containing leucine rich repeat","termid":"PBO:0051871"}


id: PBO:0090675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsf1","termid":"PBO:0090675"}


id: GO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortical collecting duct over time, from its formation to the mature structure. The metanephric cortical collecting duct is the portion of the metanephric collecting duct that resides in the renal cortex.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical collecting duct development","termid":"GO:0072059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortical collecting duct development","termid":"GO:0072219"}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101200],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+.","definition_xrefs":["EC:1.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","RHEA:10160","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: GO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the death receptor (DR) family. The DR family falls within the tumor necrosis factor receptor superfamily and is characterized by a cytoplasmic region of ~80 residues termed the death domain (DD).","definition_xrefs":["GOC:ceb","GOC:rl","PMID:15654015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"death receptor binding","synonyms":[{"name":"APO binding","type":"narrow"},{"name":"DR binding","type":"narrow"},{"name":"EDAR binding","type":"narrow"},{"name":"FAS binding","type":"narrow"},{"name":"KILLER binding","type":"narrow"},{"name":"NGFR binding","type":"narrow"},{"name":"TNFR1 binding","type":"narrow"},{"name":"TRAIL binding","type":"narrow"},{"name":"death receptor adaptor protein activity","type":"related"},{"name":"death receptor interacting protein activity","type":"related"},{"name":"death receptor ligand","type":"narrow"},{"name":"death receptor-associated factor activity","type":"related"}],"termid":"GO:0005123"}


id: PR:O74515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cia1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone cia1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.05c","synonyms":[{"name":"Spom972h-cia1","type":"exact"},{"name":"anti-silencing function protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74515"}


id: PBO:0064225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 2","termid":"PBO:0064225"}


id: FYPO:0001406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased septum thickness","synonyms":[{"name":"increased septal material","type":"related"},{"name":"increased septum thickness during mitotic cell cycle","type":"related"},{"name":"increased septum thickness during vegetative growth","type":"exact"},{"name":"thick septum","type":"exact"}],"termid":"FYPO:0001406"}


id: PBO:0072184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17","termid":"PBO:0072184"}


id: GO:0015882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-ascorbic acid is transported across a lipid bilayer, from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transport","synonyms":[{"name":"L-ascorbate transport","type":"exact"},{"name":"L-ascorbic acid transport","type":"related"},{"name":"vitamin C transport","type":"exact"}],"termid":"GO:0015882"}


id: GO:0034899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N,N-trimethylamine + NADPH + H+ + O2 = N,N,N-trimethylamine N-oxide + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1407","EC:1.14.13.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trimethylamine monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05623","RHEA:31979"],"termid":"GO:0034899"}


id: GO:0031261
data:
  {"annotated_genes":["SJAG_02394","SJAG_02348","SJAG_05301","SJAG_02667","SJAG_00874","SJAG_04341","SJAG_01354","SJAG_00536","SJAG_02098","SJAG_03451","SJAG_00857","SJAG_02800","SJAG_00696","SJAG_01762","SJAG_01267","SJAG_04995","SJAG_03927","SJAG_04210","SJAG_01624","SJAG_00884","SJAG_00327"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86635,88130,90115,90721,93495,95577,102568,103400,103993,104208,106383,107542,107801,109339,109729,111250,111418],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[109648,109321,89155,108064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000811"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins immediately prior to the initiation of DNA replication. The preinitiation complex is formed by the assembly of additional proteins onto an existing prereplicative complex. In budding yeast, the additional proteins might include Cdc45p, Sld2p, Sld3p, Dpb11p, DNA polymerases, and others; in fission yeast the GINS complex is present.","definition_xrefs":["PMID:17230184","GOC:jl","GOC:rb","PMID:12694535","PMID:15194812","GOC:bf","GOC:hjd","GOC:vw","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_02098":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04995":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"DNA replication preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-IC","type":"exact"}],"termid":"GO:0031261","terms_by_termid":{"GO:0000811":null,"GO:0031261":null}}


id: GO:0019278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"UDP-N-acetylgalactosamine metabolic process","termid":"GO:0019276"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine catabolic process","synonyms":[{"name":"UDP-N-acetylgalactosamine breakdown","type":"exact"},{"name":"UDP-N-acetylgalactosamine catabolism","type":"exact"},{"name":"UDP-N-acetylgalactosamine degradation","type":"exact"}],"termid":"GO:0019278"}


id: GO:0099043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex during clathrin-dependent endocytosis that connects the assembling clathrin coat to the proteins and/or lipoproteins to be transported in an endocytic vesicle. This complex includes a receptor and an adaptor protein that links the receptor to the clathrin coat.","definition_xrefs":["GOC:dos","GOC:lb","GOC:vw","PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"},{"relation_name":"part_of","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"cargo loading involved in clathrin-dependent endocytosis","termid":"GO:0099043"}


id: PBO:0076660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 22","termid":"PBO:0076660"}


id: _global:activated_by
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated_by","secondary_identifiers":["GOREL:0000507"],"synonyms":[{"name":"activated by","type":"exact"},{"name":"activated_by_chemical","type":"exact"},{"name":"activated_by_substance","type":"exact"},{"name":"activity_increased_by","type":"exact"}],"termid":"_global:activated_by"}


id: PBO:0071282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 5","termid":"PBO:0071282"}


id: PBO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1 domain","termid":"PBO:0001518"}


id: PR:000028934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 reduced form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/Red+","pombase_gene_id":"SPCC576.03c","synonyms":[{"name":"Spom-tpx1/Red+","type":"exact"},{"name":"tpx1/Red+","type":"exact"}],"termid":"PR:000028934"}


id: PBO:0055233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2660","termid":"PBO:0055233"}


id: PATO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000216 heart rate (obsolete PATO:0000216)","termid":"PATO:0000216"}


id: _global:gained
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X gained Y if X is a variant_of X' and Y part of X but not X'.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gained","termid":"_global:gained"}


id: PBO:0089201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human REX1BD ortholog, implicated in DNA repair","termid":"PBO:0089201"}


id: GO:0071204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein that binds to specific sites in, and is required for cleavage of, the 3'-end of histone pre-mRNAs. The complex contains the U7 snRNP and additional proteins, including the stem-loop binding protein (SLBP) and the exonuclease 3'hExo/Eri-1.","definition_xrefs":["PMID:19470752","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"histone pre-mRNA 3'end processing complex","synonyms":[{"name":"histone 3'end pre-mRNA complex","type":"exact"}],"termid":"GO:0071204"}


id: PBO:0029436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division","termid":"PBO:0029436"}


id: PBO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 2","termid":"PBO:0080065"}


id: PBO:0087599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; null mutant is sensitive to drug inducing secretion of vacuolar cargo; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0087599"}


id: PBO:0076146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate receptor 1","termid":"PBO:0076146"}


id: PBO:0017678
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer's disease","termid":"PBO:0017678"}


id: PR:Q9P7K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDO1-like protein C21C3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.19","synonyms":[{"name":"Spom972h-SPBC21C3.19","type":"exact"}],"termid":"PR:Q9P7K6"}


id: PBO:0057159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302d","termid":"PBO:0057159"}


id: GO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continual breakdown and regeneration of peptidoglycan required to maintain the cell wall.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan turnover","secondary_identifiers":["GO:0009287"],"synonyms":[{"name":"murein turnover","type":"exact"}],"termid":"GO:0009254"}


id: PBO:0046276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMG1 N1-specific pseudouridine methyltransferase","termid":"PBO:0046276"}


id: GO:0033449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GUU codon-amino acid adaptor activity","synonyms":[{"name":"GTT codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033449"}


id: GO:2001272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043280"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","termid":"GO:2001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"positive regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001272"}


id: PBO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 2","termid":"PBO:0052053"}


id: PBO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, E","termid":"PBO:0050042"}


id: PBO:0031252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_via_MVB_pathway","termid":"PBO:0031252"}


id: GO:0106236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation/production of a glycolipid surfactant that acts as a bacterial biofilm dispersal.","definition_xrefs":["GOC:vw","PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"rhamnolipid biosynthesis","synonyms":[{"name":"rhamnolipid production","type":"related"}],"termid":"GO:0106236"}


id: PBO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 40","termid":"PBO:0050338"}


id: PBO:0013013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23","termid":"PBO:0013013"}


id: FYPO:0001202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to calcium starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular response to calcium starvation","synonyms":[{"name":"normal cellular response to calcium depletion","type":"exact"},{"name":"normal cellular response to calcium deprivation","type":"exact"},{"name":"normal cellular response to calcium ion starvation","type":"exact"},{"name":"normal cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001202"}


id: FYPO:0001116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to oxidative stress","termid":"FYPO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased RNA level during cellular response to H2O2","type":"exact"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"decreased transcript level during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced RNA level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001116"}


id: PBO:0080472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 3","termid":"PBO:0080472"}


id: PBO:0079268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC39A antisense RNA 1","termid":"PBO:0079268"}


id: PBO:0089018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Cki3","termid":"PBO:0089018"}


id: PBO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG repeat","termid":"PBO:0000574"}


id: PBO:0030277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_processing_during_vegetative_growth","termid":"PBO:0030277"}


id: PBO:0017557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase), Dnf1 (predicted)","termid":"PBO:0017557"}


id: PBO:0085724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p to the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm; contains an SH3 domain and a Ptc1p binding domain (PBM)","termid":"PBO:0085724"}


id: PBO:0027250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dimethyl_sulfoxide","termid":"PBO:0027250"}


id: GO:0090520
data:
  {"annotated_genes":["SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101329],"is_not":false,"summary":null,"term":"GO:0090520"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by a sphingolipid.","definition_xrefs":["PMID:9525917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sphingolipid mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide 1-phosphate signaling pathway","type":"narrow"},{"name":"ceramide signaling pathway","type":"narrow"},{"name":"sphingolipid mediated signal transduction","type":"exact"},{"name":"sphingolipid signaling pathway","type":"related"},{"name":"sphingolipid-mediated signaling pathway","type":"exact"},{"name":"sphingosine signaling pathway","type":"narrow"}],"termid":"GO:0090520","terms_by_termid":{"GO:0090520":null}}


id: PBO:0046150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastase, neutrophil expressed","termid":"PBO:0046150"}


id: PBO:0067954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 256","termid":"PBO:0067954"}


id: PR:O13736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor, arginine/serine-rich 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein sla1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.01","secondary_identifiers":["UniProtKB:O13736"],"synonyms":[{"name":"SPAC16E8.01","type":"related"},{"name":"Spom972h-SCAF1","type":"exact"}],"termid":"PR:O13736"}


id: PBO:0046351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 9","termid":"PBO:0046351"}


id: GO:1905867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epididymis over time, from its formation to the mature structure.","definition_xrefs":["PMID:12388089","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epididymis development","synonyms":[{"name":"epididymus development","type":"exact"}],"termid":"GO:1905867"}


id: FYPO:0007882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah","PMID:34608864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal protein kinase activity during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein kinase activity during cellular response to MMS","type":"exact"}],"termid":"FYPO:0007882"}


id: GO:0010178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of the amide bond between IAA (auxin) and the conjugated amino acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}


id: PBO:0024475
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human USB1","termid":"PBO:0024475"}


id: PBO:0028363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_cell","termid":"PBO:0028363"}


id: PBO:0061591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophic receptor tyrosine kinase 2","termid":"PBO:0061591"}


id: GO:0008594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a photoreceptor cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a photoreceptor cell, a sensory cell that reacts to the presence of light. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"photoreceptor cell development","termid":"GO:0042461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell morphogenesis","synonyms":[{"name":"photoreceptor development","type":"related"}],"termid":"GO:0008594"}


id: PR:O14209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C6B12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.04c","secondary_identifiers":["UniProtKB:O14209"],"synonyms":[{"name":"Spom972h-ybdL","type":"exact"}],"termid":"PR:O14209"}


id: PATO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency quality inhering in a bearer by virtue of the bearer's lacking efficiency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efficiency","termid":"PATO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inefficient","termid":"PATO:0001677"}


id: PBO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (predicted)","termid":"PBO:0002054"}


id: PBO:0060566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 2, pseudogene","termid":"PBO:0060566"}


id: GO:1904667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GOC:dph","GOC:tb","GO_REF:0000059","PMID:26216882","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-protein transferase activity","termid":"GO:0051444"},{"relation_name":"is_a","term_name":"regulation of ubiquitin protein ligase activity","termid":"GO:1904666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:0060564","GO:1904190"],"synonyms":[{"name":"down regulation of E3","type":"related"},{"name":"down regulation of protein ubiquitination activity","type":"exact"},{"name":"down regulation of ubiquitin ligase activity","type":"exact"},{"name":"down regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"down-regulation of E3","type":"related"},{"name":"down-regulation of protein ubiquitination activity","type":"exact"},{"name":"down-regulation of ubiquitin ligase activity","type":"exact"},{"name":"down-regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"downregulation of E3","type":"related"},{"name":"downregulation of protein ubiquitination activity","type":"exact"},{"name":"downregulation of ubiquitin ligase activity","type":"exact"},{"name":"downregulation of ubiquitin protein ligase activity","type":"exact"},{"name":"inhibition of E3","type":"related"},{"name":"inhibition of protein ubiquitination activity","type":"narrow"},{"name":"inhibition of ubiquitin ligase activity","type":"narrow"},{"name":"inhibition of ubiquitin protein ligase activity","type":"narrow"},{"name":"negative regulation of APC activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of APC-Cdc20 complex activity","type":"narrow"},{"name":"negative regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"negative regulation of APC/C activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of E3","type":"related"},{"name":"negative regulation of anaphase-promoting complex activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"negative regulation of mitotic anaphase-promoting complex activity","type":"related"},{"name":"negative regulation of protein ubiquitination activity","type":"exact"},{"name":"negative regulation of ubiquitin ligase activity","type":"exact"}],"termid":"GO:1904667"}


id: GO:0018893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond. Dibenzofuran is a white crystalline solid created from the production of coal tar and used as an insecticide and an intermediate in the production of other chemicals.","definition_xrefs":["GOC:ai","UM-BBD_pathwayID:dbf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dibenzofuran metabolic process","synonyms":[{"name":"dibenzofuran metabolism","type":"exact"}],"termid":"GO:0018893"}


id: PBO:0070411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA3 pseudogene 1","termid":"PBO:0070411"}


id: PBO:0072760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 10","termid":"PBO:0072760"}


id: PBO:0067017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 28, pseudogene","termid":"PBO:0067017"}


id: FYPO:0000788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000788"}


id: GO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromethanopterin + NADPH = 5,6,7,8-tetrahydromethanopterin + NADP.","definition_xrefs":["GOC:mengo_curators","PMID:15028691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydromethanopterin reductase activity","secondary_identifiers":["EC:1.5.99.15","RHEA:42804"],"termid":"GO:0044684"}


id: GO:0034353
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87872],"is_not":false,"summary":null,"term":"GO:0034353"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a 5' terminal diphosphate from the 5'-triphosphate end of an mRNA, leaving a 5'-monophosphate end.","definition_xrefs":["GOC:jh2","PMID:17612492","PMID:18202662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mRNA 5'-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA pyrophosphohydrolase activity","type":"broad"}],"termid":"GO:0034353","terms_by_termid":{"GO:0034353":null}}


id: PBO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingoid long chain base kinase (predicted)","termid":"PBO:0001608"}


id: GO:0015960
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diadenosine polyphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate anabolism","type":"exact"},{"name":"diadenosine polyphosphate biosynthesis","type":"exact"},{"name":"diadenosine polyphosphate formation","type":"exact"},{"name":"diadenosine polyphosphate synthesis","type":"exact"}],"termid":"GO:0015960","terms_by_termid":{"GO:0015966":null}}


id: PBO:0053569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 587","termid":"PBO:0053569"}


id: GO:0031340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of vesicle fusion","synonyms":[{"name":"activation of vesicle fusion","type":"narrow"},{"name":"stimulation of vesicle fusion","type":"narrow"},{"name":"up regulation of vesicle fusion","type":"exact"},{"name":"up-regulation of vesicle fusion","type":"exact"},{"name":"upregulation of vesicle fusion","type":"exact"}],"termid":"GO:0031340"}


id: PBO:0029415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_meiosis","termid":"PBO:0029415"}


id: PBO:0111966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dsl1/NZR complex secretory pathway protein Sec39","termid":"PBO:0111966"}


id: PBO:0085388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085388"}


id: PBO:0041093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRWD1 antisense RNA 1","termid":"PBO:0041093"}


id: PATO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of color which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant color","termid":"PATO:0001615"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of color","synonyms":[{"name":"high variability of color","type":"exact"}],"termid":"PATO:0001612"}


id: PBO:0043019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM Rab escort protein","termid":"PBO:0043019"}


id: PBO:0028376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxanine_DNA_N-glycosylase_activity","termid":"PBO:0028376"}


id: PBO:0054812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2225","termid":"PBO:0054812"}


id: GO:1990721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is capable of dephosphorylation of alky, aryl and acyl orthophosphate monoesters and phosphorylated proteins. Optimal activity in acidic environment (pH 4-6). In mammals it consists of a homodimer of ACPP.","definition_xrefs":["PMID:12525165","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete prostatic acid phosphatase complex (obsolete GO:1990721)","synonyms":[{"name":"ACPP homodimer complex","type":"narrow"},{"name":"PAP complex","type":"exact"},{"name":"prostatic acid phosphatase complex","type":"exact"}],"termid":"GO:1990721"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: GO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4-bisphosphate + H2O = 1D-myo-inositol 3-phosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-3,4-bisphosphate 4-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855202","RHEA:43388"],"termid":"GO:0052828"}


id: PBO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ace2 target genes","termid":"PBO:0004423"}


id: MOD:01541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01541"}


id: FYPO:0002210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that taper at one end to a diameter smaller than the other. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, tapered cells (obsolete FYPO:0002210)","synonyms":[{"name":"inviable microcolony, bottle/skittle cells","type":"exact"},{"name":"inviable microcolony, skittle-shaped cells","type":"exact"},{"name":"inviable microcolony, tapered vegetative cells","type":"exact"}],"termid":"FYPO:0002210"}


id: PBO:0002657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc membrane transporter Cis4","termid":"PBO:0002657"}


id: SO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, linear RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"double_stranded_RNA_chromosome","termid":"SO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_double_stranded_RNA_chromosome","synonyms":[{"name":"linear double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000964"}


id: SO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A C-terminus protein motif (CAAX) serving as a post-translational prenylation site modified by the attachment of either a farnesyl or a geranyl-geranyl group to a cysteine residue. Farnesyltransferase recognizes CaaX boxes where X = M, S, Q, A, or C, whereas Geranylgeranyltransferase I recognizes CaaX boxes with X = L or E.","direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"CAAX_box","synonyms":[{"name":"CAAX box","type":"exact"}],"termid":"SO:0002230"}


id: PBO:0018087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Prp24","termid":"PBO:0018087"}


id: PBO:0056691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 1","termid":"PBO:0056691"}


id: PBO:0025524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1F0 ATPase synthase peripheral stalk assembly factor Ina17 (predicted)","termid":"PBO:0025524"}


id: PBO:0044038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 10","termid":"PBO:0044038"}


id: FYPO:0003482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased punctate cytoplasmic protein localization","synonyms":[{"name":"increased protein localization to cytoplasmic puncta","type":"exact"},{"name":"increased punctate cytoplasmic protein localisation","type":"exact"},{"name":"increased punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0003482"}


id: GO:0048662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation.","definition_xrefs":["CL:0000192","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell proliferation","termid":"GO:0048660"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell proliferation","synonyms":[{"name":"down regulation of smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of SMC proliferation","type":"exact"}],"termid":"GO:0048662"}


id: GO:0032144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that possesses 4-aminobutyrate transaminase activity.","definition_xrefs":["PMID:15528998","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"4-aminobutyrate transaminase complex","synonyms":[{"name":"ABAT complex","type":"exact"},{"name":"GABA transaminase complex","type":"exact"},{"name":"GABA-T complex","type":"exact"}],"termid":"GO:0032144"}


id: FYPO:0002704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic vacuole docking is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"part_of","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal autophagic vacuole docking","termid":"FYPO:0002704"}


id: PBO:0057741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1471","termid":"PBO:0057741"}


id: PBO:0064124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain containing, cytoplasmic","termid":"PBO:0064124"}


id: GO:0008846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of large proteins such as globin, casein and denatured serum albumin, in presence of ATP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase La activity (obsolete GO:0008846)","synonyms":[{"name":"ATP-dependent lon proteinase","type":"narrow"},{"name":"ATP-dependent protease La activity","type":"related"},{"name":"ATP-dependent serine proteinase activity","type":"related"},{"name":"Escherichia coli proteinase La","type":"related"},{"name":"Escherichia coli serine proteinase La","type":"related"},{"name":"PIM1 protease activity","type":"related"},{"name":"PIM1 proteinase activity","type":"related"},{"name":"endopeptidase La activity","type":"exact"},{"name":"gene lon protease activity","type":"related"},{"name":"gene lon proteins","type":"related"},{"name":"lon proteinase","type":"narrow"},{"name":"protease La","type":"related"},{"name":"proteinase La","type":"related"},{"name":"serine protease La","type":"related"}],"termid":"GO:0008846"}


id: SO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GNAACR, bound by the transcription factor complex PBF (PCB-binding factor) and found in promoters of genes expressed during the M/G1 transition of the cell cycle.","definition_xrefs":["PMID:12411492","GO:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCB","termid":"SO:0001871"}


id: PBO:0028287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_mitotic_G2_DNA_damage_checkpoint_signaling","termid":"PBO:0028287"}


id: PBO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 16","termid":"PBO:0062146"}


id: PBO:0027157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_arginine_level","termid":"PBO:0027157"}


id: PBO:0068456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 32, pseudogene","termid":"PBO:0068456"}


id: PBO:0045553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 5 pseudogene 2","termid":"PBO:0045553"}


id: GO:1902309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:11953308","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein dephosphorylation","termid":"GO:0035308"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine dephosphorylation","termid":"GO:1902308"},{"relation_name":"negatively_regulates","term_name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-serine dephosphorylation","synonyms":[{"name":"down regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"down-regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"downregulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"inhibition of peptidyl-serine dephosphorylation","type":"narrow"}],"termid":"GO:1902309"}


id: PBO:0111525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 5","termid":"PBO:0111525"}


id: FYPO:0001253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, has three or more nuclei and two or more septa, and the septa are not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0000005"],"is_obsolete":false,"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei","secondary_identifiers":["FYPO:0005056"],"synonyms":[{"name":"elongated multinucleate multiseptate cell, single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei during mitotic cell cycle","type":"related"},{"name":"elongated multiseptate cell, with three or more nuclei and single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001253"}


id: PBO:0038917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 1","termid":"PBO:0038917"}


id: PBO:0029801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_actin_cables","termid":"PBO:0029801"}


id: MOD:01519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced from a protein or a protein modification as the result of a fragmentation process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reporter fragment","termid":"MOD:01519"}


id: PBO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; preferentially binds DNA ends, protecting them from exonucleatic cleavage; deletion affects telomere maintenance via recombination; related to mammalian high mobility group proteins","termid":"PBO:0085044"}


id: PR:O74925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04999","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protein pep3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.02","secondary_identifiers":["UniProtKB:O74925"],"synonyms":[{"name":"Spom972h-VPS18","type":"exact"},{"name":"vacuolar protein sorting-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74925"}


id: PBO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 15","termid":"PBO:0071598"}


id: GO:0102176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloeucalenone + NADPH + H+ = cycloeucalenol + NADP.","definition_xrefs":["GOC:pz","PMID:4387005"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloeucalenone reductase activity (obsolete GO:0102176)","termid":"GO:0102176"}


id: PBO:0087584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase","termid":"PBO:0087584"}


id: PBO:0046616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group S71 member 1, envelope","termid":"PBO:0046616"}


id: GO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of kinin cascade","termid":"GO:0002256"}


id: GO:0141018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a component of the host extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21270401","PMID:23586629","PMID:15228540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host via host extracellular matrix","synonyms":[{"name":"adhesion of symbiont to host extracellular matrix via collagen","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via fibronectin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via integrin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via laminin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via vitronectin","type":"narrow"}],"termid":"GO:0141018"}


id: GO:0007546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The events determining the somatic sexual phenotype after the initial transmission of that phenotype to soma-specific information pathways.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processes downstream of sex determination signal","termid":"GO:0007545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic processes downstream of sex determination signal","termid":"GO:0007546"}


id: GO:0097458
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a neuron, the basic cellular unit of nervous tissue. A typical neuron consists of a cell body (often called the soma), an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.","definition_xrefs":["GOC:pr","Wikipedia:Neuron"],"gene_count":0,"genotype_count":0,"name":"obsolete neuron part (obsolete GO:0097458)","termid":"GO:0097458"}


id: PATO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the distance between the end of the inserted object and the surface of the object into which it penetrates.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion depth","termid":"PATO:0002207"}


id: GO:1901527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any abscisic acid mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["PMID:22730405","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway involved in stomatal movement","synonyms":[{"name":"abscisic acid mediated signaling pathway involved in stomatal movement","type":"related"},{"name":"abscisic acid mediated signalling involved in stomatal movement","type":"exact"}],"termid":"GO:1901527"}


id: PBO:0047255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member C","termid":"PBO:0047255"}


id: GO:0051951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of L-glutamate import across plasma membrane","termid":"GO:0002038"},{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of glutamate uptake involved in transmission of nerve impulse","termid":"GO:0051946"},{"relation_name":"positively_regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of glutamate reuptake","type":"exact"},{"name":"positive regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of glutamate uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of glutamate uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051951"}


id: PBO:0039286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 15, pseudogene","termid":"PBO:0039286"}


id: PBO:0065214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 1 like 1","termid":"PBO:0065214"}


id: SO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_downstream_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Seattleseq:near-gene-3","type":"exact"}],"termid":"SO:0002083"}


id: MOD:00685
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamic acid.","definition_xrefs":["PubMed:6692818","RESID:AA0006#GLN","Unimod:7#Q","PubMed:957425","PubMed:9192900","PubMed:1881881","PubMed:4565668","PubMed:4922541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamic acid residue","termid":"MOD:00015"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated L-glutamine","synonyms":[{"name":"(2S)-2-aminopentanedioic acid","type":"exact"},{"name":"1-aminopropane-1,3-dicarboxylic acid","type":"exact"},{"name":"2-aminoglutaric acid","type":"exact"},{"name":"2-azanylpentanedioic acid","type":"exact"},{"name":"L-glutamic acid","type":"exact"},{"name":"MOD_RES Deamidated glutamine","type":"exact"},{"name":"alpha-aminoglutaric acid","type":"exact"},{"name":"dNGln","type":"exact"},{"name":"glutaminic acid","type":"exact"}],"termid":"MOD:00685"}


id: GO:2000868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrone secretion","termid":"GO:2000867"},{"relation_name":"negatively_regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrone secretion","synonyms":[{"name":"negative regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"negative regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000868"}


id: GO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type IV secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052426)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052426"}


id: PBO:0084601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR312C-B was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, SPH1/YLR313C","termid":"PBO:0084601"}


id: PBO:0085209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidoreductase of the mitochondrial inner membrane; involved in cytoplasmic and mitochondrial iron homeostasis and required for activity of Fe-S cluster-containing enzymes; one of the few mitochondrial proteins essential for viability","termid":"PBO:0085209"}


id: GO:0097700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to laminar fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","PMID:21768538","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to laminar fluid shear stress","termid":"GO:0071499"},{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to laminar fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to laminar fluid shear stress","type":"exact"}],"termid":"GO:0097700"}


id: FYPO:0005199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:14739927","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased negative regulation of protein kinase activity","synonyms":[{"name":"decreased inhibition of protein kinase activity","type":"narrow"},{"name":"decreased negative regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased negative regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced negative regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0005199"}


id: PBO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminate synthase","termid":"PBO:0060494"}


id: PBO:0083042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"De novo-originated gene from non-coding sequence; protein can suppress mating and promote vegetative growth; shortens lag phase by physically interacting with Snf1p; binds with Matalpha2p to promoters of haploid-specific genes; functions in mating and fermentation, mediates crosstalk between reproduction and vegetative growth; required for survival upon exposure to K1 killer toxin; involved in ion homeostasis","termid":"PBO:0083042"}


id: PBO:0031826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_modification","termid":"PBO:0031826"}


id: PBO:0024807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to","termid":"PBO:0024807"}


id: PBO:0080599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 33","termid":"PBO:0080599"}


id: PBO:0077007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 9","termid":"PBO:0077007"}


id: PBO:0042114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 186","termid":"PBO:0042114"}


id: PBO:0066199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17","termid":"PBO:0066199"}


id: RO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"RO:0002453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","termid":"RO:0002557"}


id: GO:0062243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory outer membrane","synonyms":[{"name":"outer membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062243"}


id: PBO:0079123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone subunit beta","termid":"PBO:0079123"}


id: PATO:0001499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's resembling a ball (a sphere whose equatorial diameter is equal to the polar diameter).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"circular","termid":"PATO:0000411"},{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spherical","secondary_identifiers":["PATO:0000408"],"synonyms":[{"name":"globular","type":"exact"},{"name":"rotund","type":"related"}],"termid":"PATO:0001499"}


id: PATO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the front of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised anteriorly","termid":"PATO:0001921"}


id: GO:0102616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin D + NAD(P) = oryzalexin A + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin A synthase activity (obsolete GO:0102616)","termid":"GO:0102616"}


id: PR:Q9Y7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA/RNA-binding protein KIN17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03308","PANTHER:PTHR12805:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIN17-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.09c","secondary_identifiers":["UniProtKB:Q9Y7X9"],"synonyms":[{"name":"Spom972h-KIN","type":"exact"}],"termid":"PR:Q9Y7X9"}


id: PATO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting a downward bending of its leaves or other plant parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epinastic","termid":"PATO:0000945"}


id: GO:2000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:2000718"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000719"}


id: GO:0031534
data:
  {"annotated_genes":["SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95386],"is_not":false,"summary":null,"term":"GO:0031534"}]},"cv_name":"biological_process","definition":"The movement of one microtubule along another microtubule, where the motion is directed towards the minus ends of the microtubules.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule sliding","termid":"GO:0051012"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"minus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031534","terms_by_termid":{"GO:0031534":null}}


id: PBO:0046052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F","termid":"PBO:0046052"}


id: GO:0008788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose 6-phosphate + H2O = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["EC:3.2.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalase activity","termid":"GO:0015927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha,alpha-phosphotrehalase activity","secondary_identifiers":["RHEA:23008","MetaCyc:TRE6PHYDRO-RXN"],"synonyms":[{"name":"alpha,alpha-trehalose-6-phosphate phosphoglucohydrolase activity","type":"related"},{"name":"phosphotrehalase activity","type":"related"},{"name":"trehalose-6-phosphate hydrolase activity","type":"related"}],"termid":"GO:0008788"}


id: GO:0015342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Fe2+)(out) = (Zn2+ or Fe2+)(in), probably powered by proton motive force.","definition_xrefs":["TC:2.A.5.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, iron permease activity (obsolete GO:0015342)","synonyms":[{"name":"zinc, iron permease activity","type":"exact"}],"termid":"GO:0015342"}


id: GO:0031960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosteroid hormone stimulus. A corticosteroid is a steroid hormone that is produced in the adrenal cortex. Corticosteroids are involved in a wide range of physiologic systems such as stress response, immune response and regulation of inflammation, carbohydrate metabolism, protein catabolism, blood electrolyte levels, and behavior. They include glucocorticoids and mineralocorticoids.","definition_xrefs":["GOC:mah","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosteroid","synonyms":[{"name":"response to corticosteroid stimulus","type":"exact"}],"termid":"GO:0031960"}


id: PBO:0075022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-33","termid":"PBO:0075022"}


id: PBO:0031016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cisplatin","termid":"PBO:0031016"}


id: GO:0031869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostacyclin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"prostacyclin receptor binding","synonyms":[{"name":"prostacyclin receptor ligand","type":"narrow"},{"name":"prostanoid IP receptor binding","type":"exact"}],"termid":"GO:0031869"}


id: PBO:0068568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 19, pseudogene","termid":"PBO:0068568"}


id: PBO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 4","termid":"PBO:0048083"}


id: GO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.","definition_xrefs":["PMID:15928678","ISBN:0120781859","GOC:add","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MHC class II protein complex","termid":"GO:0042613"}


id: PBO:0067650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 825, pseudogene","termid":"PBO:0067650"}


id: GO:0016077
data:
  {"annotated_genes":["SJAG_03745","SJAG_01176","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84601],"is_not":false,"summary":null,"term":"GO:0016077"},{"annotations":[109432,88425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins.","definition_xrefs":["ISBN:0198506732","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"sno(s)RNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sRNA catabolic process","type":"narrow"},{"name":"sno(s)RNA breakdown","type":"exact"},{"name":"sno(s)RNA catabolism","type":"exact"},{"name":"sno(s)RNA degradation","type":"exact"},{"name":"snoRNA catabolic process","type":"narrow"}],"termid":"GO:0016077","terms_by_termid":{"GO:0016077":null,"GO:0071036":null}}


id: GO:0098942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098942"}


id: PBO:0029462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_location","termid":"PBO:0029462"}


id: PBO:0043339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 antisense RNA 1","termid":"PBO:0043339"}


id: GO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron apoptotic process","synonyms":[{"name":"regulation of apoptosis of neuronal cells","type":"exact"},{"name":"regulation of apoptosis of neurons","type":"exact"},{"name":"regulation of neuron apoptosis","type":"narrow"},{"name":"regulation of neuron programmed cell death","type":"exact"},{"name":"regulation of neuronal cell programmed cell death","type":"exact"},{"name":"regulation of programmed cell death of neuronal cells","type":"exact"},{"name":"regulation of programmed cell death, neurons","type":"exact"}],"termid":"GO:0043523"}


id: GO:0006550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucine metabolic process","termid":"GO:0006549"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"isoleucine catabolic process","secondary_identifiers":["MetaCyc:ILEUDEG-PWY"],"synonyms":[{"name":"isoleucine breakdown","type":"exact"},{"name":"isoleucine catabolism","type":"exact"},{"name":"isoleucine degradation","type":"exact"}],"termid":"GO:0006550"}


id: PBO:0056668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 6","termid":"PBO:0056668"}


id: PBO:0080386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS13C divergent transcript","termid":"PBO:0080386"}


id: PR:Q9UR07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-11 gene.","definition_xrefs":["UniProtKB:Q9UR07","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-11 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.17","synonyms":[{"name":"Spom972h-Tf2-11","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR07"}


id: GO:0023067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the lymphatic system.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via lymphatic system (obsolete GO:0023067)","synonyms":[{"name":"signal transmission via lymphatic system","type":"exact"}],"termid":"GO:0023067"}


id: PBO:0055772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNX1 antisense RNA 1","termid":"PBO:0055772"}


id: PBO:0087782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087782"}


id: PBO:0017503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-glutamate O-methyltransferase (predicted)","termid":"PBO:0017503"}


id: PBO:0085701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA polymerase II transcription; also required for histone modifications and splicing; constitutively recruited to the CYC1 promoter and required for recruitment of chromatin remodeling factors for the expression of CYC1 gene; interacts genetically or physically with RNAP II, TBP, TFIIS, and chromatin remodelling factors; central domain is highly conserved throughout eukaryotes; mutations confer an Spt- phenotype","termid":"PBO:0085701"}


id: PBO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 18","termid":"PBO:0060071"}


id: PBO:0089553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, unknown specificity","termid":"PBO:0089553"}


id: PBO:0062900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase like domain containing 1","termid":"PBO:0062900"}


id: GO:1990844
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrion that occurs in between fibrils of striated muscle cells and responds in distinct ways to physiological triggers.","definition_xrefs":["PMID:26039174","PMID:23297307"],"gene_count":0,"genotype_count":0,"name":"obsolete interfibrillar mitochondrion (obsolete GO:1990844)","synonyms":[{"name":"IFM","type":"exact"},{"name":"IMF mitochondrion","type":"exact"},{"name":"intermyofibrillar mitochondrion","type":"exact"}],"termid":"GO:1990844"}


id: GO:0034236
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70048],"is_not":false,"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to one or both of the catalytic subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"},{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein kinase A catalytic subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PKA catalytic subunit binding","type":"exact"}],"termid":"GO:0034236","terms_by_termid":{"GO:0034236":null}}


id: PBO:0074797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-2","termid":"PBO:0074797"}


id: GO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA9-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071127"}


id: PBO:0058081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4299","termid":"PBO:0058081"}


id: GO:0070014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses oligo-1,6-glucosidase activity; the complex is a heterodimer located in the cell membrane, and is formed by proteolytic cleavage of a single precursor polypeptide. The two subunits have different substrate specificities.","definition_xrefs":["PMID:3366777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"glucosidase complex","termid":"GO:1902687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"sucrase-isomaltase complex","secondary_identifiers":["Wikipedia:Sucrase-isomaltase"],"synonyms":[{"name":"oligo-1,6-glucosidase complex","type":"related"}],"termid":"GO:0070014"}


id: PBO:0077902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase gamma 1","termid":"PBO:0077902"}


id: PBO:0070634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 5","termid":"PBO:0070634"}


id: GO:0018645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propene + NADH + H+ + O2 = 1,2-epoxypropane + NAD+ + H2O.","definition_xrefs":["EC:1.14.13.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alkene monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.69-RXN","UM-BBD_enzymeID:e0039","RHEA:11792"],"synonyms":[{"name":"alkene epoxygenase activity","type":"related"},{"name":"alkene,NADH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0018645"}


id: GO:0090430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoyl-CoA + a saturated primary alcohol = an alkyl caffeate + CoA.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"caffeoyl-CoA: alcohol caffeoyl transferase activity","termid":"GO:0090430"}


id: GO:1901976
data:
  {"annotated_genes":["SJAG_02336","SJAG_03126","SJAG_01679","SJAG_04259","SJAG_00883","SJAG_01837","SJAG_03353","SJAG_02451","SJAG_02169","SJAG_03327","SJAG_03681","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104419,110425,109950,86918,112049,100054,95739,103392,108124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[109955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[97488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[90373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:23028116","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001047"],"synonyms":[{"name":"regulation of G1/S checkpoint","type":"related"},{"name":"regulation of G1/S transition checkpoint","type":"related"}],"termid":"GO:1901976","terms_by_termid":{"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905325":null,"GO:1905326":null}}


id: FYPO:0001528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GTP binding","termid":"FYPO:0001528"}


id: GO:0061308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell development","termid":"GO:0014032"},{"relation_name":"part_of","term_name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}


id: GO:0016036
data:
  {"annotated_genes":["SJAG_00233","SJAG_03519","SJAG_04067","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103741,109507,109508,111936],"is_not":false,"summary":null,"term":"GO:0016036"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_01970":null,"SJAG_03519":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phosphate starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016036","terms_by_termid":{"GO:0016036":null}}


id: PBO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 4","termid":"PBO:0061346"}


id: PBO:0080998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 34","termid":"PBO:0080998"}


id: PBO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 3","termid":"PBO:0061583"}


id: PBO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methyl_methanesulfonate","termid":"PBO:0031341"}


id: PBO:0038814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 1","termid":"PBO:0038814"}


id: PBO:0078483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-3","termid":"PBO:0078483"}


id: PBO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 1","termid":"PBO:0061541"}


id: PBO:0064609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 3","termid":"PBO:0064609"}


id: GO:0007481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the haltere disc are generated and organized. This includes the transformation of a haltere imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"haltere disc development","termid":"GO:0035216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere disc morphogenesis","synonyms":[{"name":"haltere disc metamorphosis","type":"exact"}],"termid":"GO:0007481"}


id: GO:0021840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that control the direction of migration of interneurons as a component of the process of migration from the subpallium to the cortex.","definition_xrefs":["GOC:jid","GO_REF:0000021","PMID:12626695","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"part_of","term_name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}


id: GO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dGMP biosynthetic process","synonyms":[{"name":"dGMP anabolism","type":"exact"},{"name":"dGMP biosynthesis","type":"exact"},{"name":"dGMP formation","type":"exact"},{"name":"dGMP synthesis","type":"exact"}],"termid":"GO:0006181"}


id: GO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids into a cell or organelle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"amino acid import","synonyms":[{"name":"amino acid uptake","type":"exact"}],"termid":"GO:0043090"}


id: RO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of developmentally preceded by","direct_ancestors":[{"relation_name":"is_a","term_name":"has_developmental_potential_involving","termid":"RO:0002384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_succeeded_by","termid":"RO:0002286"}


id: PBO:0089963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Ncb2","termid":"PBO:0089963"}


id: GO:0090556
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731","SJAG_05209","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90605,94107,95633,108669],"is_not":false,"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:ab","PMID:16452632","PMID:20224745","RHEA:38567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase-coupled phosphatidylserine transporter activity","type":"broad"},{"name":"ATPase-dependent phosphatidylserine transporter activity","type":"broad"},{"name":"phosphatidylserine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylserine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090556","terms_by_termid":{"GO:0090556":null}}


id: PBO:0087791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; promotes attachment of small ubiquitin-related modifier sumo (Smt3p) to primarily cytoplasmic proteins; regulates Rsp5p ubiquitin ligase activity and is in turn itself regulated by Rsp5p; required for sumoylation of septins and histone H3 variant Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; localizes to the septin ring; acts as an adapter between E2, Ubc9p and substrates; tends to compensate for survival of DNA damage in absence of Nfi1p","termid":"PBO:0087791"}


id: GO:2001000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of xylan catabolic process","synonyms":[{"name":"regulation of xylan breakdown","type":"exact"},{"name":"regulation of xylan catabolism","type":"exact"},{"name":"regulation of xylan degradation","type":"exact"}],"termid":"GO:2001000"}


id: GO:0048385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"regulation of RAR signaling pathway","type":"exact"},{"name":"regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048385"}


id: PBO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like C","termid":"PBO:0061260"}


id: PBO:0050028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ beta 1","termid":"PBO:0050028"}


id: PBO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 1","termid":"PBO:0039633"}


id: PBO:0028552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_mitosis","termid":"PBO:0028552"}


id: PBO:0062698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 4 pseudogene","termid":"PBO:0062698"}


id: PBO:0077444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 178A","termid":"PBO:0077444"}


id: PBO:0066428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats pseudogene 3","termid":"PBO:0066428"}


id: PBO:0072160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 37","termid":"PBO:0072160"}


id: PBO:0091080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane organization protein, HVA22/TB2/DP1 family protein","termid":"PBO:0091080"}


id: GO:0015977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon fixation","secondary_identifiers":["Wikipedia:Carbon_fixation"],"synonyms":[{"name":"autotrophic CO2 fixation","type":"exact"},{"name":"autotrophic CO2 fixation pathway","type":"exact"},{"name":"autotrophy","type":"exact"},{"name":"carbon dioxide fixation","type":"narrow"}],"termid":"GO:0015977"}


id: PATO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally posterior structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterioralized","termid":"PATO:0000630"}


id: RO:HOM0000032
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paedomorphosis that is produced by a retardation of somatic development.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_paedomorphorsis_relationship_with","termid":"RO:HOM0000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_neoteny_relationship_with","synonyms":[{"name":"juvenilization","type":"exact"},{"name":"neotenous to","type":"exact"}],"termid":"RO:HOM0000032"}


id: PBO:0066833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 132","termid":"PBO:0066833"}


id: PBO:0076472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TANK antisense RNA 1","termid":"PBO:0076472"}


id: PBO:0056658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 25","termid":"PBO:0056658"}


id: PBO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoglycerate_mutase_activity","termid":"PBO:0030066"}


id: PBO:0087623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CSN and 26S proteasome lid complexes; similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; Rpn5p is an essential protein; the COP9 signalosome is also known as the CSN","termid":"PBO:0087623"}


id: GO:1905391
data:
  {"annotated_genes":["SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104119],"is_not":false,"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cell separation after cytokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25411334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cell separation after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell division site involved in cell separation after cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cell separation following cytokinesis","type":"exact"},{"name":"regulation of protein localisation to cell division site involved in cytokinetic cell separation","type":"related"},{"name":"regulation of protein localisation to cell division site involved in mitotic cytokinetic cell separation","type":"exact"}],"termid":"GO:1905391","terms_by_termid":{"GO:1905391":null}}


id: PBO:0084967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase; plays a catalytic role in oxidation of cytoplasmic one-carbon units; expression is regulated by Bas1p and Bas2p, repressed by adenine, and may be induced by inositol and choline","termid":"PBO:0084967"}


id: PBO:0045376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate mannosyltransferase subunit 2, regulatory","termid":"PBO:0045376"}


id: PBO:0038996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AE binding protein 2","termid":"PBO:0038996"}


id: FYPO:0004231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of methylated histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal methylated histone binding","termid":"FYPO:0004231"}


id: PBO:0087406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; assists Cdc48p in the dislocation of misfolded, polyubiquitinated ERAD substrates that are subsequently delivered to the proteasome for degradation; also involved in the regulated destruction of resident ER membrane proteins, such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing (RUP)","termid":"PBO:0087406"}


id: GO:0051370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to Z-band alternatively spliced PDZ motif protein (ZASP). ZASP is a Z-band protein specifically expressed in heart and skeletal muscle. This protein contains N-terminal PDZ domain and C-terminal LIM domain.","definition_xrefs":["PMID:10427098","PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ZASP binding (obsolete GO:0051370)","synonyms":[{"name":"Z-band alternatively spliced PDZ-motif protein binding","type":"exact"},{"name":"ZASP binding","type":"exact"}],"termid":"GO:0051370"}


id: PBO:0065042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 7","termid":"PBO:0065042"}


id: FYPO:0001717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal malonic acid import","synonyms":[{"name":"abnormal malonate import","type":"related"},{"name":"abnormal malonic acid import across plasma membrane","type":"exact"},{"name":"abnormal malonic acid import during mitotic cell cycle","type":"related"},{"name":"abnormal malonic acid import during vegetative growth","type":"exact"},{"name":"abnormal malonic acid import into cell","type":"exact"},{"name":"abnormal malonic acid uptake","type":"exact"}],"termid":"FYPO:0001717"}


id: CHEBI:48958
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,1'-azobis(N,N-dimethylformamide)","termid":"CHEBI:48958"}


id: FYPO:0001744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal biotin import","synonyms":[{"name":"abnormal biotin import across plasma membrane","type":"exact"},{"name":"abnormal biotin import during mitotic cell cycle","type":"related"},{"name":"abnormal biotin import during vegetative growth","type":"exact"},{"name":"abnormal biotin import into cell","type":"exact"},{"name":"abnormal biotin uptake","type":"exact"}],"termid":"FYPO:0001744"}


id: PBO:0089915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Bdp1","termid":"PBO:0089915"}


id: GO:1990826
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex.","definition_xrefs":["PMID:10633080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"nucleoplasmic periphery of the nuclear pore complex","synonyms":[{"name":"associated with the nuclear pore","type":"related"}],"termid":"GO:1990826"}


id: PBO:0039359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 1","termid":"PBO:0039359"}


id: FYPO:0008172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 at the silent mating type cassette occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K5 acetylation during vegetative growth","termid":"FYPO:0005309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008172"}


id: PBO:0050403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 4","termid":"PBO:0050403"}


id: PBO:0054291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1682","termid":"PBO:0054291"}


id: GO:0120331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endothelial tube.","definition_xrefs":["GOC:sl","PMID:23239824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube formation","termid":"GO:0120331"}


id: PR:A6X978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.02","synonyms":[{"name":"Spom972h-SPAC9E9.02","type":"exact"}],"termid":"PR:A6X978"}


id: PBO:0068640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 21, pseudogene","termid":"PBO:0068640"}


id: PR:000035574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A MAD2:MAD3 complex whose components are encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER","PMID:12676091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAD2:MAD3 complex (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-(MAD2:MAD3)","type":"exact"}],"termid":"PR:000035574"}


id: PBO:0050896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 1","termid":"PBO:0050896"}


id: PBO:0065074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 3","termid":"PBO:0065074"}


id: PBO:0071265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 10","termid":"PBO:0071265"}


id: GO:2000942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amylopectin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amylopectin metabolic process","synonyms":[{"name":"regulation of Amylopectin metabolism","type":"exact"}],"termid":"GO:2000942"}


id: GO:2000899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xyloglucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"xyloglucan metabolic process","termid":"GO:0010411"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"xyloglucan catabolic process","synonyms":[{"name":"xyloglucan catabolism","type":"exact"}],"termid":"GO:2000899"}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["GOC:mengo_curators","PMID:9914308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: FYPO:0007805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the ATP hydrolysis-dependent activity that loads H3-H4 histone dimers onto DNA is absent.","definition_xrefs":["PMID:31848341","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal H3-H4 dimer loading onto DNA","termid":"FYPO:0007804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abolished H3-H4 dimer loading onto DNA","synonyms":[{"name":"abolished H3-H4 dimer loading activity","type":"exact"},{"name":"abolished histone H3-H4 dimer loading activity","type":"exact"}],"termid":"FYPO:0007805"}


id: GO:0051338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transferase activity","synonyms":[{"name":"transferase regulator","type":"exact"}],"termid":"GO:0051338"}


id: GO:0034704
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"An ion channel complex through which calcium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calcium channel complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034704","terms_by_termid":{"GO:0005891":null}}


id: PBO:0059302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49 pseudogene 1","termid":"PBO:0059302"}


id: GO:0007441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"}


id: FYPO:0006616
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115300,115301],"is_not":false,"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and has a diameter greater than normal. Cell volume may or may not be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased cell diameter","termid":"FYPO:0006615"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell diameter","termid":"FYPO:0006615"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"viable vegetative cell with increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00028","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","rga6delta"],"synonyms":[{"name":"viable cell with increased cell diameter during vegetative growth","type":"exact"},{"name":"viable vegetative cell with increased cell diameter during mitotic cell cycle","type":"related"},{"name":"viable vegetative cell with increased cell thickness","type":"exact"},{"name":"viable vegetative cell with increased cell width","type":"exact"}],"termid":"FYPO:0006616","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0063237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 2","termid":"PBO:0063237"}


id: SO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non-coding stem-loop RNA present in nematodes and insects, functionally and structurally related to vertebrate Y RNA.","definition_xrefs":["PMID:25908866","PMID:30666901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sbRNA","synonyms":[{"name":"Stem-bulge RNA","type":"exact"},{"name":"stem_bulge_RNA","type":"exact"}],"termid":"SO:0002354"}


id: FYPO:0003163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is abnormal. All nuclease activities may be abnormal, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclease activity","termid":"FYPO:0003163"}


id: FYPO:0005808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of movement of one or more proteins within the plasma membrane of a spore is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein movement within plasma membrane","termid":"FYPO:0005807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of protein movement within spore plasma membrane","termid":"FYPO:0005808"}


id: PBO:0077768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 4","termid":"PBO:0077768"}


id: GO:0047518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-methyladenosine + H2O = 1-methyladenine + ribofuranose.","definition_xrefs":["RHEA:12865","EC:3.2.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"1-methyladenosine nucleosidase activity","secondary_identifiers":["KEGG_REACTION:R03885","MetaCyc:1-METHYLADENOSINE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"1-methyladenosine hydrolase activity","type":"related"},{"name":"1-methyladenosine ribohydrolase activity","type":"related"}],"termid":"GO:0047518"}


id: PBO:0051196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-14 (pseudogene)","termid":"PBO:0051196"}


id: PBO:0081778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705G","termid":"PBO:0081778"}


id: PBO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 4","termid":"PBO:0060696"}


id: PBO:0064914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 3","termid":"PBO:0064914"}


id: FYPO:0006890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of heme export from the vacuole to the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vacuolar transport","termid":"FYPO:0000598"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased heme export from vacuole","synonyms":[{"name":"decreased heme export from vacuole during mitotic cell cycle","type":"related"},{"name":"decreased heme export from vacuole during vegetative growth","type":"exact"},{"name":"heme export from vacuole to cytoplasm","type":"exact"},{"name":"reduced heme export from vacuole","type":"exact"}],"termid":"FYPO:0006890"}


id: PBO:0040663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 9","termid":"PBO:0040663"}


id: GO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction in which a halogen in the donor substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on halogen in donors (obsolete GO:0052583)","secondary_identifiers":["EC:1.22.-.-"],"termid":"GO:0052583"}


id: PBO:0063406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 2","termid":"PBO:0063406"}


id: PBO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_divided_germinated_spores_(obsolete_FYPO:0000319)","termid":"PBO:0031058"}


id: PBO:0034138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-confers_advantage_in","termid":"PBO:0034138"}


id: PBO:0026680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_arginine_level","termid":"PBO:0026680"}


id: PBO:0085405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; truncation and overexpression suppresses lethality of G-alpha protein deficiency","termid":"PBO:0085405"}


id: PBO:0087055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication","termid":"PBO:0087055"}


id: PBO:0063436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 10","termid":"PBO:0063436"}


id: GO:0080160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of selenate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:18761637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"selenate transport","termid":"GO:0080160"}


id: PBO:0059245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L15","termid":"PBO:0059245"}


id: PBO:0108581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, human ATXN10 ortholog","termid":"PBO:0108581"}


id: PBO:0042961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 3","termid":"PBO:0042961"}


id: FYPO:0004511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long cytoplasmic microtubules","termid":"FYPO:0000233"},{"relation_name":"is_a","term_name":"curved interphase microtubules","termid":"FYPO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"long curved interphase microtubules","synonyms":[{"name":"elongated curved interphase microtubules","type":"exact"},{"name":"long curved cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"long curved interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004511"}


id: PBO:0040896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 2","termid":"PBO:0040896"}


id: PBO:0041275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 2","termid":"PBO:0041275"}


id: PBO:0041576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C21orf62 antisense RNA 1","termid":"PBO:0041576"}


id: PBO:0045102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 2 like","termid":"PBO:0045102"}


id: PBO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit beta 1","termid":"PBO:0052601"}


id: MOD:00679
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a carbon atom of a residue and removes hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxygenated residue","termid":"MOD:00676"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon oxygenated residue","synonyms":[{"name":"COxyRes","type":"exact"}],"termid":"MOD:00679"}


id: FYPO:0003819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA helicase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0001985","FYPO:0000652","FYPO:0000641","FYPO:0000707","FYPO:0005447"],"is_obsolete":false,"name":"decreased 5'-3' DNA helicase activity","synonyms":[{"name":"reduced 5'-3' DNA helicase activity","type":"exact"}],"termid":"FYPO:0003819"}


id: GO:1904066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in dauer larval development.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000060","PMID:22665789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in dauer larval development","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signaling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signalling pathway involved in dauer larval development","type":"exact"}],"termid":"GO:1904066"}


id: PBO:0043008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase domain containing 1","termid":"PBO:0043008"}


id: GO:0051196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coenzyme metabolic process (obsolete GO:0051196)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051196"}


id: PBO:0087921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that binds IME1 Upstream Activation Signal (UAS)ru; COM2 transcription is regulated by Haa1p, Sok2p and Zap1p transcriptional activators; may bind the IME1 promoter under all growth conditions to negatively regulate its transcription in the absence of a positive regulator that binds more effectively; repressor activity may depend on phosphorylation by PKA; C. albicans homolog (MNL1) plays a role in adaptation to stress","termid":"PBO:0087921"}


id: GO:1904372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to actin cortical patch","termid":"GO:1904370"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell cortex","termid":"GO:1904778"},{"relation_name":"positively_regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to actin cortical patch","synonyms":[{"name":"activation of protein localisation to actin cortical patch","type":"narrow"},{"name":"activation of protein localization to actin cortical patch","type":"narrow"},{"name":"positive regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"up regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"up regulation of protein localization to actin cortical patch","type":"exact"},{"name":"up-regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"up-regulation of protein localization to actin cortical patch","type":"exact"},{"name":"upregulation of protein localisation to actin cortical patch","type":"exact"},{"name":"upregulation of protein localization to actin cortical patch","type":"exact"}],"termid":"GO:1904372"}


id: PBO:0043245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 5","termid":"PBO:0043245"}


id: PBO:0001492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CHCH domain protein (predicted)","termid":"PBO:0001492"}


id: PBO:0068290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease L","termid":"PBO:0068290"}


id: GO:0061058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061058"}


id: PBO:0036294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex polyribonucleotide 5'-hydroxyl-kinase subunit (predicted)","termid":"PBO:0036294"}


id: PBO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 4","termid":"PBO:0043374"}


id: GO:1902169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catechin stimulus.","definition_xrefs":["PMID:23516620","GOC:rjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to catechin","termid":"GO:1902168"},{"relation_name":"is_a","term_name":"cellular response to flavonoid","termid":"GO:1905396"},{"relation_name":"is_a","term_name":"cellular response to phenylpropanoid","termid":"GO:1905546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to catechin","termid":"GO:1902169"}


id: PBO:0078929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-1","termid":"PBO:0078929"}


id: PBO:0040763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain enriched guanylate kinase associated","termid":"PBO:0040763"}


id: MOD:01474
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-[S-(carboxymethyl)phosphopantetheine]-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-[S-(carboxymethyl)phosphopantetheine]-L-serine","termid":"MOD:01474"}


id: GO:2001228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to gamma radiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to gamma radiation","termid":"GO:0010332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to gamma radiation","synonyms":[{"name":"regulation of response to gamma ray","type":"related"},{"name":"regulation of response to gamma-ray photon","type":"related"}],"termid":"GO:2001228"}


id: FYPO:0001942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population in a culture remains in lag phase longer than normal. The onset of exponential growth is thus delayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased duration of lag phase","synonyms":[{"name":"delayed exponential growth","type":"exact"},{"name":"prolonged lag phase","type":"exact"}],"termid":"FYPO:0001942"}


id: GO:1905154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane invagination.","definition_xrefs":["GOC:bf","GO_REF:0000058","PMID:26589353","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of membrane invagination","termid":"GO:1905153"},{"relation_name":"negatively_regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of membrane invagination","synonyms":[{"name":"down regulation of membrane invagination","type":"exact"},{"name":"down-regulation of membrane invagination","type":"exact"},{"name":"downregulation of membrane invagination","type":"exact"},{"name":"inhibition of membrane invagination","type":"narrow"}],"termid":"GO:1905154"}


id: GO:0001165
data:
  {"annotated_genes":["SJAG_02747","SJAG_05331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89345,112600],"is_not":false,"summary":null,"term":"GO:0001165"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase I. RNA polymerase I elements are referred to either enhancers or upstream control element (UCE, or alternately referred to as the upstream element).","definition_xrefs":["PMID:12865296","PMID:14969726","GOC:txnOH","PMID:8057832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02747":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase I cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001166"],"synonyms":[{"name":"RNA polymerase I enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream control element sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream element sequence-specific DNA binding","type":"related"}],"termid":"GO:0001165","terms_by_termid":{"GO:0001165":null}}


id: PBO:0073626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC10 antisense RNA 2","termid":"PBO:0073626"}


id: PBO:0091556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein, similar to cell surface molecules","termid":"PBO:0091556"}


id: PR:O59813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.03 gene.","definition_xrefs":["UniProtKB:O59813","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C794.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.03","synonyms":[{"name":"Spom972h-SPCC794.03","type":"exact"}],"termid":"PR:O59813"}


id: PBO:0078844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily A member 1","termid":"PBO:0078844"}


id: PBO:0052581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore scaffold 1","termid":"PBO:0052581"}


id: GO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microfilament, mediated by motor proteins.","definition_xrefs":["GOC:mah","PMID:15979253","PMID:16306220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrion migration along actin filament","synonyms":[{"name":"mitochondrial migration along actin filament","type":"exact"},{"name":"mitochondrial migration along microfilament","type":"exact"},{"name":"mitochondrial migration, actin-mediated","type":"exact"},{"name":"mitochondrion migration along microfilament","type":"exact"},{"name":"mitochondrion transport along actin filament","type":"exact"}],"termid":"GO:0034642"}


id: GO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-2 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-2 production","termid":"GO:0032663"},{"relation_name":"positively_regulates","term_name":"interleukin-2 production","termid":"GO:0032623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-2 production","secondary_identifiers":["GO:0045086","GO:1900042"],"synonyms":[{"name":"activation of interleukin-2 production","type":"narrow"},{"name":"positive regulation of IL-2 production","type":"exact"},{"name":"positive regulation of interleukin-2 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-2 secretion","type":"narrow"},{"name":"stimulation of interleukin-2 production","type":"narrow"},{"name":"up regulation of interleukin-2 production","type":"exact"},{"name":"up-regulation of interleukin-2 production","type":"exact"},{"name":"upregulation of interleukin-2 production","type":"exact"}],"termid":"GO:0032743"}


id: PBO:0052837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-2","termid":"PBO:0052837"}


id: PATO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000871 aggressive (obsolete PATO:0000871)","termid":"PATO:0000871"}


id: GO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane involved in mitochondrial fission","synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane involved in mitochondrial fission","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090152"}


id: GO:0002029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that stops, prevents, or reduces the frequency, rate or extent of G protein-coupled receptor signaling pathway after prolonged stimulation with an agonist of the pathway.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"desensitization of G protein-coupled receptor signaling pathway","synonyms":[{"name":"desensitisation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"desensitization of G-protein coupled receptor protein signaling pathway","type":"exact"}],"termid":"GO:0002029"}


id: PBO:0072181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 8","termid":"PBO:0072181"}


id: PBO:0079980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 18","termid":"PBO:0079980"}


id: PBO:0084915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic spindle protein; interacts with components of the Dam1 (DASH) complex, its effector Sli15p, and microtubule-associated protein Bim1p; also localizes to nuclear microtubules and to the bud neck in a ring-shaped structure; inhibits dynein function","termid":"PBO:0084915"}


id: PBO:0055104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2522","termid":"PBO:0055104"}


id: PBO:0067601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 764, pseudogene","termid":"PBO:0067601"}


id: FYPO:0004637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a DNA-directed DNA polymerase activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA-directed DNA polymerase activity","synonyms":[{"name":"normal DNA polymerase activity","type":"broad"}],"termid":"FYPO:0004637"}


id: GO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TRAIL production","termid":"GO:0032679"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of TRAIL production","secondary_identifiers":["GO:0045555"],"synonyms":[{"name":"down regulation of TRAIL production","type":"exact"},{"name":"down-regulation of TRAIL production","type":"exact"},{"name":"downregulation of TRAIL production","type":"exact"},{"name":"inhibition of TRAIL production","type":"narrow"},{"name":"negative regulation of TRAIL biosynthetic process","type":"narrow"}],"termid":"GO:0032719"}


id: PBO:0073423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 1","termid":"PBO:0073423"}


id: GO:0060895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the dorsal ventral patterning of the spinal cord.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway involved in spinal cord dorsal/ventral patterning","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in spinal cord dorsal/ventral patterning","type":"exact"}],"termid":"GO:0060895"}


id: GO:0044805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A type of nucleophagy, distinct from piecemeal microautophagy of the nucleus (PNM) where the nuclear material is delivered to the vacuole/lysosome for breakdown and recycling later than observed for PNM.","definition_xrefs":["GOC:dgf","GOC:jl","PMID:22768199"],"gene_count":0,"genotype_count":0,"name":"obsolete late nucleophagy (obsolete GO:0044805)","termid":"GO:0044805"}


id: MOD:01369
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl methyl ester group.","definition_xrefs":["Unimod:528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"deamidated and methyl esterified residue","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01369"}


id: GO:0018532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N5,N10-methenyltetrahydromethanopterin + H2 = N5,N10-methylenetetrahydromethanopterin.","definition_xrefs":["UM-BBD_reactionID:r0353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","secondary_identifiers":["EC:1.5.99.-"],"synonyms":[{"name":"F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"F420-independent methylene-H4MPT dehydrogenase activity","type":"exact"},{"name":"coenzyme F420-independent 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"coenzyme F420-independent methylene-H4MPT dehydrogenase activity","type":"exact"}],"termid":"GO:0018532"}


id: PBO:0024872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex bromodomain subunit Bdf1","termid":"PBO:0024872"}


id: PBO:0040519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AXL receptor tyrosine kinase","termid":"PBO:0040519"}


id: PBO:0031327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_copper","termid":"PBO:0031327"}


id: GO:0008747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminate = N-acetyl-D-mannosamine + pyruvate.","definition_xrefs":["RHEA:23296","EC:4.1.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylneuraminate lyase activity","secondary_identifiers":["KEGG_REACTION:R01811","Reactome:R-HSA-4085217","MetaCyc:RXN0-7390"],"synonyms":[{"name":"N-acetylneuraminate aldolase activity","type":"related"},{"name":"N-acetylneuraminate pyruvate-lyase (N-acetyl-D-mannosamine-forming)","type":"related"},{"name":"N-acetylneuraminate pyruvate-lyase activity","type":"related"},{"name":"N-acetylneuraminic acid aldolase activity","type":"related"},{"name":"N-acetylneuraminic acid lyase activity","type":"related"},{"name":"N-acetylneuraminic aldolase activity","type":"related"},{"name":"N-acetylneuraminic lyase activity","type":"related"},{"name":"NALase activity","type":"related"},{"name":"NANA lyase activity","type":"related"},{"name":"NPL","type":"related"},{"name":"acetylneuraminate lyase activity","type":"related"},{"name":"acetylneuraminate pyruvate-lyase activity","type":"related"},{"name":"neuraminate aldolase activity","type":"related"},{"name":"neuraminic acid aldolase activity","type":"related"},{"name":"neuraminic aldolase activity","type":"related"},{"name":"sialate lyase activity","type":"related"},{"name":"sialic acid aldolase activity","type":"related"},{"name":"sialic aldolase activity","type":"related"}],"termid":"GO:0008747"}


id: PBO:0071685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 17","termid":"PBO:0071685"}


id: GO:0044110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism occurring when the organism is in a symbiotic interaction.","definition_xrefs":["GO:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth involved in symbiotic interaction (obsolete GO:0044110)","synonyms":[{"name":"growth during symbiotic interaction","type":"related"},{"name":"growth on or near surface of other organism during symbiotic interaction","type":"related"},{"name":"growth on or near surface of other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0044110"}


id: GO:0021938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in cerebellar granule cells that contributes to the regulation of proliferation of the cells.","definition_xrefs":["PMID:15157725","GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation","termid":"GO:0021937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of granule cell precursor cell proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of granule cell precursor cell proliferation","type":"exact"},{"name":"smoothened signalling pathway in regulation of granule cell precursor cell proliferation","type":"exact"}],"termid":"GO:0021938"}


id: FYPO:0002996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to hydrogen peroxide","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to H2O2","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002996"}


id: PBO:0027269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_copper_ion_starvation","termid":"PBO:0027269"}


id: GO:0010397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pectic apiogalacturonan, characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues substituted with apiose and apiobiose (D-apiofuranosyl-beta-(1->3)-D-apiose) side chains via O-2 or O-3 links.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"apiogalacturonan metabolic process","synonyms":[{"name":"apiogalacturonan metabolism","type":"exact"}],"termid":"GO:0010397"}


id: PBO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof14","termid":"PBO:0001437"}


id: PBO:0031751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_acetylation","termid":"PBO:0031751"}


id: PBO:0029860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell","termid":"PBO:0029860"}


id: GO:0030662
data:
  {"annotated_genes":["SJAG_02805","SJAG_00284","SJAG_04569","SJAG_05345","SJAG_04391","SJAG_02539","SJAG_04517","SJAG_04070","SJAG_00192","SJAG_02482","SJAG_00072","SJAG_04002","SJAG_02234","SJAG_02177","SJAG_04609","SJAG_00906","SJAG_03153","SJAG_04644","SJAG_04513","SJAG_00108","SJAG_01809","SJAG_01939","SJAG_00557","SJAG_02282","SJAG_00104","SJAG_04565","SJAG_03907","SJAG_01633","SJAG_05344","SJAG_04023","SJAG_03558","SJAG_02349","SJAG_01508","SJAG_00379","SJAG_02453","SJAG_04474","SJAG_01167","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97280,109163,108946,114983],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[107813,107754,92433,104496],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[91061,109068],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[111030,114600],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[85114,90357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[89393,103279,113525,100276,94621,112525,94712,109918,99426],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[70529,108877,102722,74114,108138,112742,89531,91688,104893,106374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[97232,110350,104187,105969,91728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"coated vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030662","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030665":null}}


id: GO:0051458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticotropin by a cell. Corticotropin hormone is a polypeptide hormone synthesized and secreted from corticotropes in the anterior lobe of the pituitary gland in response to corticotropin-releasing hormone (CRH) released by the hypothalamus.","definition_xrefs":["GOC:cjm","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"corticotropin secretion","synonyms":[{"name":"ACTH secretion","type":"exact"},{"name":"adrenocorticotropic hormone secretion","type":"exact"},{"name":"adrenocorticotropin secretion","type":"related"},{"name":"adrenotropic hormone secretion","type":"exact"},{"name":"adrenotropin secretion","type":"exact"},{"name":"corticotropic hormone secretion","type":"exact"}],"termid":"GO:0051458"}


id: PBO:0036374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-5A-deoxyhypusine synthase Dys1 (predicted)","termid":"PBO:0036374"}


id: PBO:0040207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTN2 antisense RNA 1","termid":"PBO:0040207"}


id: PR:O74974
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A digestive organ expansion factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05047","PRO:DNx","PANTHER:PTHR12933:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.01c","secondary_identifiers":["UniProtKB:O74974"],"synonyms":[{"name":"Spom972h-DIEXF","type":"exact"},{"name":"U three protein 25 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 25 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74974"}


id: PBO:0030837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_guanine_import","termid":"PBO:0030837"}


id: PBO:0088732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb5","termid":"PBO:0088732"}


id: GO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become granulosa cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell fate commitment","termid":"GO:0060015"}


id: GO:2000595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of optic nerve formation","synonyms":[{"name":"regulation of CN II biosynthesis","type":"related"},{"name":"regulation of CN II formation","type":"related"}],"termid":"GO:2000595"}


id: PBO:0086421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase peripheral to the mitochondrial inner membrane; essential for respiratory competence, likely functions in assembly of the large ribosomal subunit, has homologs in plants and animals","termid":"PBO:0086421"}


id: FYPO:0004046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004046"}


id: PBO:0069490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 757, pseudogene","termid":"PBO:0069490"}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: PBO:0057236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 423","termid":"PBO:0057236"}


id: PBO:0064183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XJ, pseudogene","termid":"PBO:0064183"}


id: PBO:0058639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-1","termid":"PBO:0058639"}


id: MOD:00805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminoglucosyl)-L-serine.","definition_xrefs":["PubMed:8404891","RESID:AA0398","PubMed:3086323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(N-acetylamino)glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) serine","type":"exact"},{"name":"CARBOHYD O-linked (HexNAc)","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylamino)glucosyl-L-serine","type":"exact"},{"name":"O-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylglucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O3-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"OGlcNAcSer","type":"exact"}],"termid":"MOD:00805"}


id: PBO:0108933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MND1 pseudogene 1","termid":"PBO:0108933"}


id: FYPO:0006512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere morphology","termid":"FYPO:0006512"}


id: PBO:0003281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (predicted)","termid":"PBO:0003281"}


id: PR:Q9P3U8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl5 gene.","definition_xrefs":["UniProtKB:Q9P3U8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C548.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.05c","synonyms":[{"name":"Spom972h-dbl5","type":"exact"}],"termid":"PR:Q9P3U8"}


id: PBO:0054505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1905","termid":"PBO:0054505"}


id: GO:0050960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in sensory perception","termid":"GO:0050961"},{"relation_name":"part_of","term_name":"thermoception","termid":"GO:0050955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in thermoception","synonyms":[{"name":"sensory detection of temperature stimulus during thermoception","type":"exact"},{"name":"sensory detection of thermal stimulus during thermoception","type":"exact"},{"name":"sensory transduction of temperature stimulus during thermoception","type":"exact"},{"name":"sensory transduction of thermal stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of temperature stimulus","type":"exact"},{"name":"thermoception, sensory detection of thermal stimulus","type":"exact"},{"name":"thermoception, sensory transduction of temperature stimulus","type":"exact"},{"name":"thermoception, sensory transduction of thermal stimulus","type":"exact"}],"termid":"GO:0050960"}


id: PBO:0043359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 1","termid":"PBO:0043359"}


id: PBO:0058224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4514","termid":"PBO:0058224"}


id: PBO:0072862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP","termid":"PBO:0072862"}


id: PBO:0061207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide binding oligomerization domain containing 2","termid":"PBO:0061207"}


id: PBO:0027895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027895"}


id: PBO:0045911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 7","termid":"PBO:0045911"}


id: PBO:0090817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex alpha subunit Mas2","termid":"PBO:0090817"}


id: PBO:0058228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4518","termid":"PBO:0058228"}


id: GO:0050840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component of the extracellular matrix.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"extracellular matrix binding","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"related"},{"name":"extracellular matrix constituent binding","type":"exact"}],"termid":"GO:0050840"}


id: PBO:0062677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily J member 1","termid":"PBO:0062677"}


id: PBO:0080424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 8","termid":"PBO:0080424"}


id: GO:1903064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000058","PMID:23931754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of reverse cholesterol transport","termid":"GO:1903062"},{"relation_name":"positively_regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of reverse cholesterol transport","synonyms":[{"name":"activation of reverse cholesterol transport","type":"narrow"},{"name":"up regulation of reverse cholesterol transport","type":"exact"},{"name":"up-regulation of reverse cholesterol transport","type":"exact"},{"name":"upregulation of reverse cholesterol transport","type":"exact"}],"termid":"GO:1903064"}


id: PBO:0076935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 3","termid":"PBO:0076935"}


id: FYPO:0006058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal during sporulation.","definition_xrefs":["PomBase:mah","GO:0042144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole fusion","termid":"FYPO:0006057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole fusion during sporulation","synonyms":[{"name":"abnormal homotypic vacuole fusion during sporulation","type":"exact"},{"name":"abnormal vacuole fusion, non-autophagic, during sporulation","type":"exact"}],"termid":"FYPO:0006058"}


id: PBO:0004842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx41 (predicted)","termid":"PBO:0004842"}


id: PBO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 6","termid":"PBO:0043094"}


id: GO:1903917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum stress-induced eIF2alpha dephosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL","PMID:11381086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein dephosphorylation","termid":"GO:0035307"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced eIF2 alpha dephosphorylation","termid":"GO:1903916"},{"relation_name":"positively_regulates","term_name":"eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","termid":"GO:0036497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum stress-induced eIF2 alpha dephosphorylation","synonyms":[{"name":"activation of eIF2alpha dephosphorylation in response to ER stress","type":"narrow"},{"name":"activation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress-induced eIF2 alpha dephosphorylation","type":"exact"},{"name":"positive regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"positive regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"up regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"up-regulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of eIF2alpha dephosphorylation in response to ER stress","type":"exact"},{"name":"upregulation of eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of regulation of translation initiation by eIF2alpha dephosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903917"}


id: GO:0006954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.","definition_xrefs":["ISBN:0198506732","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response","secondary_identifiers":["Wikipedia:Inflammation"],"synonyms":[{"name":"inflammation","type":"broad"}],"termid":"GO:0006954"}


id: GO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transmembrane transporter activity","termid":"GO:0015573"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"salicin transmembrane transporter activity","termid":"GO:0042950"}


id: GO:0016765
data:
  {"annotated_genes":["SJAG_01575","SJAG_00337","SJAG_00582","SJAG_01880","SJAG_02583","SJAG_03352","SJAG_04923","SJAG_03810","SJAG_02896","SJAG_03659","SJAG_03580","SJAG_03102","SJAG_03755","SJAG_03863","SJAG_02163","SJAG_00815","SJAG_03029","SJAG_01058","SJAG_00554","SJAG_04735","SJAG_02491","SJAG_00224","SJAG_04568","SJAG_04481","SJAG_06603","SJAG_00580","SJAG_02719","SJAG_02972","SJAG_00381","SJAG_04085","SJAG_01865","SJAG_02360","SJAG_04130","SJAG_05181","SJAG_04434","SJAG_03173","SJAG_00179"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106388"},{"annotations":[101398,105883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090560"},{"annotations":[90761,97410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003849"},{"annotations":[87288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003866"},{"annotations":[115194,94561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002083"},{"annotations":[94562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047293"},{"annotations":[94563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008412"},{"annotations":[106547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000906"},{"annotations":[115192,109917,88004,115193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097269"},{"annotations":[91900,97552,91899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[99759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003962"},{"annotations":[99760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102028"},{"annotations":[93064,106676,105632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004124"},{"annotations":[104180,93953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045547"},{"annotations":[98735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034038"},{"annotations":[101096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004156"},{"annotations":[95749,105657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004161"},{"annotations":[107469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004310"},{"annotations":[95750,105658,107470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004311"},{"annotations":[95751,105659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004337"},{"annotations":[110039,95435,112272,114849,106762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004364"},{"annotations":[90609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004418"},{"annotations":[99554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004478"},{"annotations":[106677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003961"},{"annotations":[86748,86749,97554,97553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004660"},{"annotations":[97555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004661"},{"annotations":[105705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008495"},{"annotations":[111105,85727,97556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"},{"annotations":[110928,106549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004746"},{"annotations":[98913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004766"},{"annotations":[107471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051996"},{"annotations":[90469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004789"},{"annotations":[94244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102522"},{"annotations":[92847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052381"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase 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activity, transferring alkyl or aryl (other than methyl) groups","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["EC:2.5.1.-","Reactome:R-HSA-4419978","Reactome:R-HSA-4755545","GO:0016766","Reactome:R-HSA-6782893","Reactome:R-HSA-3159253"],"synonyms":[{"name":"transferase activity, transferring alkyl or aryl groups, other than methyl groups","type":"exact"}],"termid":"GO:0016765","terms_by_termid":{"GO:0000906":null,"GO:0002083":null,"GO:0003849":null,"GO:0003866":null,"GO:0003961":null,"GO:0003962":null,"GO:0004124":null,"GO:0004156":null,"GO:0004161":null,"GO:0004310":null,"GO:0004311":null,"GO:0004337":null,"GO:0004364":null,"GO:0004418":null,"GO:0004478":null,"GO:0004660":null,"GO:0004661":null,"GO:0004662":null,"GO:0004663":null,"GO:0004746":null,"GO:0004766":null,"GO:0004789":null,"GO:0006743":null,"GO:0006744":null,"GO:0008412":null,"GO:0008495":null,"GO:0034038":null,"GO:0045547":null,"GO:0047293":null,"GO:0051996":null,"GO:0052381":null,"GO:0090560":null,"GO:0097269":null,"GO:0102028":null,"GO:0102522":null,"GO:0106388":null}}


id: PBO:0044805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 104B","termid":"PBO:0044805"}


id: PBO:0071447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 53","termid":"PBO:0071447"}


id: PBO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, similar to a region of alpha-galactosidase, melibiase, possible pseudogene","termid":"PBO:0011506"}


id: PBO:0051583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18","termid":"PBO:0051583"}


id: PBO:0030028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_adenylyl_cyclase_activity","termid":"PBO:0030028"}


id: PBO:0084443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; high-affinity maltose transporter (alpha-glucoside transporter); encoded in the MAL3 complex locus; member of the 12 transmembrane domain superfamily of sugar transporters; functional in genomic reference strain S288C","termid":"PBO:0084443"}


id: PBO:0057728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1303","termid":"PBO:0057728"}


id: GO:0030950
data:
  {"annotated_genes":["SJAG_03748","SJAG_00152","SJAG_00424","SJAG_02838","SJAG_00030","SJAG_04461","SJAG_02392","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84691,85640,92023,95481,96324,100804,101505,106931],"is_not":false,"summary":null,"term":"GO:0030950"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007163","GO:0030036"],"is_obsolete":false,"name":"establishment or maintenance of actin cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030950","terms_by_termid":{"GO:0030950":null}}


id: PBO:0086981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; VTC3 has a paralog, VTC2, that arose from the whole genome duplication","termid":"PBO:0086981"}


id: PATO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the back or upper surface of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised dorsally","termid":"PATO:0001919"}


id: GO:0010950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endopeptidase activity","termid":"GO:0010950"}


id: GO:0009536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.","definition_xrefs":["GOC:jl","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid","secondary_identifiers":["Wikipedia:Plastid"],"termid":"GO:0009536"}


id: GO:0035243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.","definition_xrefs":["RESID:AA0069","EC:2.1.1.320","RESID:AA0067","PMID:14705965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008276","GO:0016740","GO:0003674","GO:0016741","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein-arginine omega-N symmetric methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6804383","RHEA:48108"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega'-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N symmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N symmetric methyltransferase activity","type":"exact"},{"name":"type II PRMT activity","type":"related"},{"name":"type II protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035243"}


id: PBO:0016531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol synthase Erg7","termid":"PBO:0016531"}


id: PBO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated kinase 1A","termid":"PBO:0048407"}


id: PBO:0056549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCHR2 antisense RNA 1","termid":"PBO:0056549"}


id: PBO:0029104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_lysine_level","termid":"PBO:0029104"}


id: PBO:0078410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (CCC) 4-1","termid":"PBO:0078410"}


id: PBO:0065219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase associated protein 2","termid":"PBO:0065219"}


id: GO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plant organ formation at a consistent predetermined time point during development.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of plant organ formation","termid":"GO:0090709"}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:148","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: PBO:0111682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase implicated in lipid catobolism or detoxification","termid":"PBO:0111682"}


id: RO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","termid":"RO:0002333"}


id: PBO:0086638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YOR385W is not an essential gene","termid":"PBO:0086638"}


id: MOD:01687
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an alpha-aminium group with a trimethylaminium group.","definition_xrefs":["OMSSA:12","Unimod:37#N-term"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"alpha-amino protonated residue","termid":"MOD:01700"},{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino trimethylated residue","synonyms":[{"name":"ntermtrimethyl","type":"exact"},{"name":"N2Me3Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:01687"}


id: PBO:0074031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 18 pseudogene 1","termid":"PBO:0074031"}


id: PBO:0047965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(X)(q22.1) C","termid":"PBO:0047965"}


id: FYPO:0003970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PomBase:mah","PMID:12455694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with chromatin bridge","type":"related"},{"name":"incomplete sister chromatid segregation, with chromatin bridge during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003970"}


id: GO:0000112
data:
  {"annotated_genes":["SJAG_00512","SJAG_03206","SJAG_00995","SJAG_00901","SJAG_03618"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86087,86455,88344,99309,108245],"is_not":false,"summary":null,"term":"GO:0000112"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses endodeoxynuclease and DNA helicase activities. In S. cerevisiae, it is composed of Rad2p and the core TFIIH-Ssl2p complex (core TFIIH is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. Note that Ssl2p is also called Rad25p).","definition_xrefs":["PMID:10915862","PMID:7813015","PMID:14500720","GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_03206":null,"SJAG_03618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleotide-excision repair factor 3 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NEF3 complex","type":"exact"}],"termid":"GO:0000112","terms_by_termid":{"GO:0000112":null}}


id: PBO:0004533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family GTPase Msp1","termid":"PBO:0004533"}


id: FYECO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a cutin-1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers. Cutin-1 targets the beta-subunit of fatty acid synthase.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cutin-1","termid":"FYECO:0000307"}


id: GO:0006031
data:
  {"annotated_genes":["SJAG_04868","SJAG_00442","SJAG_03723","SJAG_04728","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[100817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006038"},{"annotations":[84417,84755,98944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034221"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"chitin metabolic process","termid":"GO:0006030"},{"relation_name":"is_a","term_name":"glucosamine-containing compound biosynthetic process","termid":"GO:1901073"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00978":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-6981"],"synonyms":[{"name":"beta-1,4-linked N-acetylglucosamine biosynthesis","type":"exact"},{"name":"beta-1,4-linked N-acetylglucosamine biosynthetic process","type":"exact"},{"name":"chitin anabolism","type":"exact"},{"name":"chitin biosynthesis","type":"exact"},{"name":"chitin formation","type":"exact"},{"name":"chitin synthesis","type":"exact"}],"termid":"GO:0006031","terms_by_termid":{"GO:0006038":null,"GO:0034217":null,"GO:0034221":null}}


id: PBO:0075128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 25","termid":"PBO:0075128"}


id: PBO:0057392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548e","termid":"PBO:0057392"}


id: FYPO:0001771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}


id: PBO:0072044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 14","termid":"PBO:0072044"}


id: PBO:0087035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L17A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; copurifies with the Dam1 complex (aka DASH complex); homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17A has a paralog, RPL17B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087035"}


id: PBO:0041193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1 mitotic checkpoint serine/threonine kinase pseudogene 1","termid":"PBO:0041193"}


id: PBO:0050439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M","termid":"PBO:0050439"}


id: PBO:0067254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 328, pseudogene","termid":"PBO:0067254"}


id: PR:O60154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C7.05 gene.","definition_xrefs":["UniProtKB:O60154","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.05","synonyms":[{"name":"Spom972h-SPBC19C7.05","type":"exact"}],"termid":"PR:O60154"}


id: PR:Q9P797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup131 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup131 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.06c","synonyms":[{"name":"Spom972h-nup131","type":"exact"},{"name":"nuclear pore protein nup131 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P797"}


id: PBO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 36","termid":"PBO:0048325"}


id: GO:0070419
data:
  {"annotated_genes":["SJAG_02237","SJAG_04199","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110057,96081,112473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A protein complex that plays a role in DNA double-strand break repair via nonhomologous end joining. Such complexes typically contain a specialized DNA ligase (e.g. Lig4 in eukaryotes) and one or more proteins that bind to DNA ends.","definition_xrefs":["PMID:17072889","GOC:mah","PMID:17938628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nonhomologous end joining complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ complex","type":"exact"},{"name":"non-homologous end joining complex","type":"exact"}],"termid":"GO:0070419","terms_by_termid":{"GO:0032807":null}}


id: GO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + poly[(R)-3-hydroxybutanoate](n) = poly[(R)-3-hydroxybutanoate](x) + poly[(R)-3-hydroxybutanoate](n-x); x is 1-5.","definition_xrefs":["MetaCyc:3.1.1.75-RXN","EC:3.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"poly(3-hydroxybutyrate) depolymerase activity","secondary_identifiers":["RHEA:11248"],"synonyms":[{"name":"PHB depolymerase activity","type":"related"},{"name":"poly((R)-hydroxyalkanoic acid) depolymerase activity","type":"broad"},{"name":"poly(3HB) depolymerase activity","type":"related"},{"name":"poly(HA(SCL)) depolymerase activity","type":"related"},{"name":"poly(HA) depolymerase activity","type":"related"},{"name":"poly(HASCL) depolymerase activity","type":"related"},{"name":"poly[(R)-3-hydroxybutyrate] hydrolase activity","type":"related"},{"name":"poly[(R)-hydroxyalkanoic acid] depolymerase","type":"broad"}],"termid":"GO:0050526"}


id: PBO:0075743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 2","termid":"PBO:0075743"}


id: GO:0103026
data:
  {"annotated_genes":["SJAG_04242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96206,110756],"is_not":false,"summary":null,"term":"GO:0103026"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructofuranose 1-phosphate + H2O = beta-D-fructofuranose + hydrogenphosphate.","definition_xrefs":["EC:3.1.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"fructose-1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:35603","MetaCyc:RXN0-5186"],"termid":"GO:0103026","terms_by_termid":{"GO:0103026":null}}


id: GO:0032247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleoside transport","termid":"GO:0032243"},{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleoside transport","synonyms":[{"name":"down regulation of purine nucleoside transport","type":"exact"},{"name":"down-regulation of purine nucleoside transport","type":"exact"},{"name":"downregulation of purine nucleoside transport","type":"exact"},{"name":"inhibition of purine nucleoside transport","type":"narrow"}],"termid":"GO:0032247"}


id: PBO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin mu","termid":"PBO:0043966"}


id: PBO:0043597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVI alpha 1 chain","termid":"PBO:0043597"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: GO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD4 production","termid":"GO:0045223"},{"relation_name":"positively_regulates","term_name":"CD4 biosynthetic process","termid":"GO:0045222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4 production","synonyms":[{"name":"activation of CD4 biosynthetic process","type":"narrow"},{"name":"positive regulation of CD4 anabolism","type":"exact"},{"name":"positive regulation of CD4 biosynthesis","type":"exact"},{"name":"positive regulation of CD4 biosynthetic process","type":"exact"},{"name":"positive regulation of CD4 formation","type":"exact"},{"name":"positive regulation of CD4 synthesis","type":"exact"},{"name":"stimulation of CD4 biosynthetic process","type":"narrow"},{"name":"up regulation of CD4 biosynthetic process","type":"exact"},{"name":"up-regulation of CD4 biosynthetic process","type":"exact"},{"name":"upregulation of CD4 biosynthetic process","type":"exact"}],"termid":"GO:0045224"}


id: PBO:0054081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1431","termid":"PBO:0054081"}


id: PBO:0087841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine deaminase, catalyzes first step in isoleucine biosynthesis; expression is under general amino acid control; ILV1 locus exhibits highly positioned nucleosomes whose organization is independent of known ILV1 regulation","termid":"PBO:0087841"}


id: PBO:0055763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non coding transcriptional activator of miR34a","termid":"PBO:0055763"}


id: PBO:0028920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_glucose_starvation_and_oxidative_stress","termid":"PBO:0028920"}


id: PBO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7 family member B","termid":"PBO:0048904"}


id: PBO:0028090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_centromeric_chromatin","termid":"PBO:0028090"}


id: PBO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF antisense RNA 1","termid":"PBO:0048517"}


id: SO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls downstream of a transcript, but within the genic region of the gene due to alternately transcribed isoforms.","definition_xrefs":["SO:ke","NCBI:dm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genic_downstream_transcript_variant","synonyms":[{"name":"genic 3 prime transcript variant","type":"exact"},{"name":"genic 3' transcript variant","type":"exact"},{"name":"genic downstream transcript variant","type":"exact"}],"termid":"SO:0002152"}


id: PBO:0084328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kexin, a subtilisin-like protease (proprotein convertase); a calcium-dependent serine protease involved in the activation of proproteins of the secretory pathway","termid":"PBO:0084328"}


id: PBO:0063407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 3","termid":"PBO:0063407"}


id: PBO:0048010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8","termid":"PBO:0048010"}


id: PBO:0056499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 3","termid":"PBO:0056499"}


id: PBO:0077362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 102","termid":"PBO:0077362"}


id: GO:0045304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which a cell becomes able to take up and incorporate extracellular DNA into its genome.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of competence for transformation","synonyms":[{"name":"regulator of establishment of competence for transformation activity","type":"related"}],"termid":"GO:0045304"}


id: PBO:0078721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 1-1","termid":"PBO:0078721"}


id: PBO:0048555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase 2","termid":"PBO:0048555"}


id: GO:0070469
data:
  {"annotated_genes":["SJAG_00260","SJAG_01763","SJAG_01077","SJAG_01490","SJAG_MIT04","SJAG_03920","SJAG_05629","SJAG_03337","SJAG_MIT13","SJAG_02744","SJAG_02229","SJAG_MIT20","SJAG_01190","SJAG_07007","SJAG_02504","SJAG_01355","SJAG_03490","SJAG_00755","SJAG_00976","SJAG_00080","SJAG_07006","SJAG_02646","SJAG_02398","SJAG_MIT03","SJAG_01671","SJAG_00601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005746"},{"annotations":[109361,112902,85025,85389],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005749"},{"annotations":[100640,111245,86174,114265,115154,109567,100235,113800,104122],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005750"},{"annotations":[115129,111597,110382,110807,115150,112963,85427,115173,88124,104447,84420],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005751"},{"annotations":[103330],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045277"}]},"cv_name":"cellular_component","definition":"The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","Wikipedia:Respirasome","GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02229":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"respirasome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane electron transport chain","type":"exact"},{"name":"respiratory chain","type":"exact"}],"termid":"GO:0070469","terms_by_termid":{"GO:0005746":null,"GO:0005749":null,"GO:0005750":null,"GO:0005751":null,"GO:0045277":null}}


id: FYPO:0001476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of guanosine-diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal guanosine-diphosphatase activity","synonyms":[{"name":"abnormal GDPase activity","type":"exact"}],"termid":"FYPO:0001476"}


id: PBO:0060007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 27","termid":"PBO:0060007"}


id: PBO:0063336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 1","termid":"PBO:0063336"}


id: PBO:0068721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 10, pseudogene","termid":"PBO:0068721"}


id: GO:0031355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid outer membrane (obsolete GO:0031355)","synonyms":[{"name":"integral to plastid outer membrane","type":"narrow"}],"termid":"GO:0031355"}


id: PBO:0041334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 common eliminated region 1","termid":"PBO:0041334"}


id: SO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in a genome which promotes recombination.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_hotspot","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_hotspot"],"synonyms":[{"name":"recombination hotspot","type":"exact"}],"termid":"SO:0000339"}


id: GO:0051745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + NAD(P)H + H+ = isopentenyl diphosphate + NAD(P)+ + H2O. Note that (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate is an alternative name for 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.","definition_xrefs":["EC:1.17.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity","secondary_identifiers":["MetaCyc:ISPH2-RXN"],"synonyms":[{"name":"4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity","type":"related"},{"name":"isopentenyl-diphosphate:NAD(P)+ oxidoreductase activity","type":"exact"}],"termid":"GO:0051745"}


id: GO:0005940
data:
  {"annotated_genes":["SJAG_03688","SJAG_04566","SJAG_03374","SJAG_03703","SJAG_01769","SJAG_00663","SJAG_04703","SJAG_01658","SJAG_02645","SJAG_04470","SJAG_04375","SJAG_00118","SJAG_01277"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97113],"is_not":false,"summary":null,"term":"GO:0005940"},{"annotations":[102159,90670,96257,112116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032175"},{"annotations":[113985,97109,97924,104117,93989,94064,100077,108937,114743,96258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[102163,90674,112119,96264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the site of cytokinesis; composed of members of the conserved family of filament-forming proteins called septins as well as septin-associated proteins. This type of septin structure is observed at the bud neck of budding fungal cells, at the site of cell division in animal cells, at the junction between the mother cell and a pseudohyphal projection, and also within hyphae of filamentous fungi at sites where a septum will form.","definition_xrefs":["GOC:mah","PMID:16151244","GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"septin ring","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030481","Wikipedia:Septin_ring"],"termid":"GO:0005940","terms_by_termid":{"GO:0005940":null,"GO:0032169":null,"GO:0032175":null,"GO:0036391":null}}


id: PATO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality inhering in a bearer by virtue of the bearer's lacking focus.","definition_xrefs":["PATOC:NC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focus","termid":"PATO:0001516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blurry","termid":"PATO:0001518"}


id: RO:HOM0000007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by common descent.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_historical_homology_relationship_with","synonyms":[{"name":"cladistic homology","type":"exact"},{"name":"historical homologous to","type":"exact"},{"name":"homology","type":"broad"},{"name":"phylogenetic homology","type":"exact"},{"name":"taxic homology","type":"exact"},{"name":"true homology","type":"related"}],"termid":"RO:HOM0000007"}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["GOC:go_curators","Pfam:PF00017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: PBO:0076908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial","termid":"PBO:0076908"}


id: PBO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase Pho4","termid":"PBO:0003191"}


id: PBO:0030740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_cell_during_nitrogen_starvation","termid":"PBO:0030740"}


id: SO:0000842
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a gene that has a specific function.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_component_region","synonyms":[{"name":"gene component region","type":"exact"}],"termid":"SO:0000842"}


id: PBO:0031723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_recombination","termid":"PBO:0031723"}


id: PBO:0066560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling like 1","termid":"PBO:0066560"}


id: GO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or both of the regulatory subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein kinase A regulatory subunit binding","synonyms":[{"name":"PKA regulatory subunit binding","type":"exact"},{"name":"protein kinase A anchoring activity","type":"related"}],"termid":"GO:0034237"}


id: GO:0150021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an apical dendrite are generated and organized.","definition_xrefs":["GOC:bc","PMID:22683681","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"apical dendrite development","termid":"GO:0150022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite morphogenesis","termid":"GO:0150021"}


id: PBO:0088824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lem2-Nur1 complex subunit Nur1","termid":"PBO:0088824"}


id: GO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a telomeric D-loop. A telomeric D-loop is a three-stranded DNA displacement loop that forms at the site where the telomeric 3' single-stranded DNA overhang (formed of the repeat sequence TTAGGG in mammals) is tucked back inside the double-stranded component of telomeric DNA molecule, thus forming a t-loop or telomeric-loop and protecting the chromosome terminus.","definition_xrefs":["PMID:19734539","GOC:BHF_telomere","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-loop DNA binding","termid":"GO:0062037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"telomeric D-loop binding","synonyms":[{"name":"telomeric Displacement-loop binding","type":"exact"}],"termid":"GO:0061821"}


id: PATO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation(from_normal)","termid":"PATO:0000069"}


id: PBO:0071996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 25","termid":"PBO:0071996"}


id: PR:O74444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug122 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 122 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.15","synonyms":[{"name":"Spom972h-mug122","type":"exact"}],"termid":"PR:O74444"}


id: PATO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality inhering in a bearer by virtue of being not completely paralysed.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement behavioral quality","termid":"PATO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially paralysed","termid":"PATO:0001858"}


id: GO:0017078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and modulates the activity of the molecular chaperone Hsc70.","definition_xrefs":["PMID:11121403","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsc70 protein regulator activity (obsolete GO:0017078)","synonyms":[{"name":"Hsc70 interacting protein","type":"broad"},{"name":"Hsc70 protein regulator activity","type":"exact"}],"termid":"GO:0017078"}


id: GO:0018363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium.","definition_xrefs":["RESID:AA0280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase-heme linkage","termid":"GO:0018186"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium","secondary_identifiers":["GO:0019925"],"synonyms":[{"name":"peroxidase-haem linkage via dihydroxyhaem-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium","type":"exact"},{"name":"peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulphonium","type":"exact"}],"termid":"GO:0018363"}


id: PBO:0058003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3926-2","termid":"PBO:0058003"}


id: PBO:0038844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 13","termid":"PBO:0038844"}


id: GO:1904844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamine stimulus.","definition_xrefs":["PMID:23185570","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-glutamine","termid":"GO:1904844"}


id: PBO:0024804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_activity_in","termid":"PBO:0024804"}


id: GO:0019334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"p-cymene metabolic process","termid":"GO:0018953"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"p-cymene catabolic process","secondary_identifiers":["MetaCyc:PWY-741"],"synonyms":[{"name":"p-cymene breakdown","type":"exact"},{"name":"p-cymene catabolism","type":"exact"},{"name":"p-cymene degradation","type":"exact"}],"termid":"GO:0019334"}


id: PBO:0062751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 3 pseudogene","termid":"PBO:0062751"}


id: PBO:0075239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 10","termid":"PBO:0075239"}


id: PBO:0072827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM domain, SH3 domain and nuclear localization signals 1","termid":"PBO:0072827"}


id: PBO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036139"}


id: PATO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer that has mass near a gravitational body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Weight"],"direct_ancestors":[{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"weight","termid":"PATO:0000128"}


id: PBO:0059557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1A","termid":"PBO:0059557"}


id: PBO:0039102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 6","termid":"PBO:0039102"}


id: GO:0048092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"regulation of male pigmentation","termid":"GO:0048088"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"male pigmentation","termid":"GO:0048094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male pigmentation","synonyms":[{"name":"down regulation of male pigmentation","type":"exact"},{"name":"down-regulation of male pigmentation","type":"exact"},{"name":"downregulation of male pigmentation","type":"exact"},{"name":"inhibition of male pigmentation","type":"narrow"}],"termid":"GO:0048092"}


id: GO:0010736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a serum response element (SRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0000976","GO:0005488"],"is_obsolete":false,"name":"serum response element binding","termid":"GO:0010736"}


id: PBO:0058268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4646","termid":"PBO:0058268"}


id: PBO:0038556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17C, depalmitoylase","termid":"PBO:0038556"}


id: GO:1905590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a fibronectin fibril.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20690820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibronectin fibril organization","termid":"GO:1905590"}


id: GO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of norepinephrine or epinephrine in the bloodstream.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine catabolic process","termid":"GO:0042419"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine catabolic process in blood stream","synonyms":[{"name":"noradrenaline-adrenalin catabolic process in blood stream","type":"exact"}],"termid":"GO:0001995"}


id: PBO:0052745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 37","termid":"PBO:0052745"}


id: PBO:0071687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 19","termid":"PBO:0071687"}


id: PBO:0078974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 2-1","termid":"PBO:0078974"}


id: PBO:0083205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL026W/RNR2","termid":"PBO:0083205"}


id: GO:0009808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:yl","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin metabolic process","synonyms":[{"name":"lignin metabolism","type":"exact"}],"termid":"GO:0009808"}


id: GO:1903231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translation repressor activity that acts by base-pairing with an mRNA. The binding can result in targeting the mRNA for degradation or interfering with mRNA translation, hence resulting in posttranscriptional gene silencing.","definition_xrefs":["PMID:20533884","GOC:BHF","PMID:18197166","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"},{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488","GO:0045182"],"is_obsolete":false,"name":"mRNA base-pairing translational repressor activity","secondary_identifiers":["GO:0150100"],"synonyms":[{"name":"RNA binding involved in PTGS","type":"broad"},{"name":"RNA binding involved in cosuppression","type":"broad"},{"name":"RNA binding involved in post-transcriptional gene silencing","type":"broad"},{"name":"RNA binding involved in posttranscriptional gene silencing","type":"broad"},{"name":"RNA binding involved in quelling","type":"broad"},{"name":"mRNA base-pairing post-transcriptional repressor activity","type":"related"},{"name":"mRNA base-pairing posttranscriptional repressor activity","type":"exact"},{"name":"mRNA binding involved in PTGS","type":"exact"},{"name":"mRNA binding involved in cosuppression","type":"related"},{"name":"mRNA binding involved in post-transcriptional gene silencing","type":"exact"},{"name":"mRNA binding involved in posttranscriptional gene silencing","type":"exact"},{"name":"mRNA binding involved in quelling","type":"exact"},{"name":"mRNA binding translation repressor activity","type":"broad"},{"name":"translational inhibitor activity via mRNA base-pairing","type":"exact"}],"termid":"GO:1903231"}


id: PBO:0064422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside phosphorylase","termid":"PBO:0064422"}


id: FYPO:0003052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is abnormal at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:22582262","PMID:23117617","PMID:24173580","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"abnormal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"abnormal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"abnormal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003052"}


id: FYPO:0000109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to papulacandin B. Cells stop growing (and may die) at a concentration of papulacandin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to papulacandin B","synonyms":[{"name":"hypersensitive to papulacandin B","type":"exact"},{"name":"sensitive to papulacandin B during mitotic cell cycle","type":"related"},{"name":"sensitive to papulacandin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000109"}


id: GO:0042720
data:
  {"annotated_genes":["SJAG_02809","SJAG_03648"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104238,105360],"is_not":false,"summary":null,"term":"GO:0042720"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane, consisting of at least two subunits, involved in processing of both nuclear- and mitochondrially-encoded proteins targeted to the intermembrane space.","definition_xrefs":["PMID:12191769","PMID:10821182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02809":null,"SJAG_03648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMP","type":"narrow"},{"name":"mitochondrion inner membrane peptidase complex","type":"exact"}],"termid":"GO:0042720","terms_by_termid":{"GO:0042720":null}}


id: PBO:0054640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2045","termid":"PBO:0054640"}


id: PR:O94399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- twf1 gene.","definition_xrefs":["UniProtKB:O94399","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.06","synonyms":[{"name":"Spom972h-twf1","type":"exact"}],"termid":"PR:O94399"}


id: PR:Q10343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-AMP-activated protein kinase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-AMP-activated protein kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.08c","secondary_identifiers":["UniProtKB:Q10343"],"synonyms":[{"name":"AMPK gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AMPK subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRKAG1","type":"exact"}],"termid":"PR:Q10343"}


id: PBO:0071031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 33","termid":"PBO:0071031"}


id: GO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid or asparagine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid/asparagine hydroxylation (obsolete GO:0006483)","synonyms":[{"name":"aspartic acid/asparagine hydroxylation","type":"exact"},{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"exact"}],"termid":"GO:0006483"}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: GO:0010504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell cycle arrest in response to nitrogen starvation (obsolete GO:0010504)","termid":"GO:0010504"}


id: GO:0140414
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding a substrate via a thioester at the terminal thiol of a covalentely linked phosphopantetheine prosthetic group and mediating protein-protein interactions with cognate enzymes for processing or offloading of the thiol-bound substrate.","definition_xrefs":["PMID:17502372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"phosphopantetheine-dependent carrier activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carrier protein activity","type":"exact"}],"termid":"GO:0140414","terms_by_termid":{"GO:0000036":null}}


id: GO:0140674
data:
  {"annotated_genes":["SJAG_02906","SJAG_04692","SJAG_02798","SJAG_00925","SJAG_02571","SJAG_02698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109256],"is_not":false,"summary":null,"term":"GO:0140674"},{"annotations":[84210,94411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[90786,92624,99725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome, driven by ATP hydrolysis.","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent chromatin remodeler activity","termid":"GO:0140658"},{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00925":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02906":null,"SJAG_04692":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140097","GO:0140597","GO:0003824","GO:0140104","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0140675"],"synonyms":[{"name":"ATP-dependent histone loader activity","type":"narrow"},{"name":"ATP-dependent histone unloader activity","type":"narrow"},{"name":"histone loader activity","type":"narrow"},{"name":"histone loading activity","type":"narrow"},{"name":"histone unloader activity","type":"narrow"},{"name":"histone unloading activity","type":"narrow"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140674","terms_by_termid":{"GO:0140665":null,"GO:0140674":null,"GO:0140849":null}}


id: PBO:0075470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 20 pseudogene 1","termid":"PBO:0075470"}


id: PBO:0091055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue light signalling transcription factor, zf-GATA type Wcs2","termid":"PBO:0091055"}


id: PBO:0065269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 30","termid":"PBO:0065269"}


id: PR:Q09785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine dehydrogenase [decarboxylating], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11773:SF0","OMA:SCHPO00067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine dehydrogenase (decarboxylating), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.06c","secondary_identifiers":["UniProtKB:Q09785"],"synonyms":[{"name":"Spom972h-GLDC","type":"exact"},{"name":"glycine cleavage system P protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine dehydrogenase (aminomethyl-transferring) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09785"}


id: PBO:0083176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TEL07R","termid":"PBO:0083176"}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: PBO:0078001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 2","termid":"PBO:0078001"}


id: GO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of T cell cytokine production","synonyms":[{"name":"regulation of T lymphocyte cytokine production","type":"exact"},{"name":"regulation of T-cell cytokine production","type":"exact"},{"name":"regulation of T-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002724"}


id: PBO:0068928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 171, pseudogene","termid":"PBO:0068928"}


id: PR:O74409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uricase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04855","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.09","secondary_identifiers":["UniProtKB:O74409"],"synonyms":[{"name":"Spom972h-Uox","type":"exact"},{"name":"urate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74409"}


id: MOD:02000
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-retinylidene-L-lysine (unspecified geometric isomer).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-retinylidene-L-lysine (unspecified geometric isomer)","synonyms":[{"name":"(2S)-2-amino-6-[3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"}],"termid":"MOD:02000"}


id: FYPO:0004855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of premeiotic DNA replication is abnormal, resulting in rereplication of part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of premeiotic DNA replication initiation","termid":"FYPO:0004758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in partial rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in partial rereplication during meiotic cell cycle","type":"related"},{"name":"abnormal negative regulation of initiation of premeiotic DNA replication, resulting in partial rereplication","type":"exact"},{"name":"abnormal negative regulation of premeiotic DNA replication initiation resulting in partial re-replication","type":"exact"},{"name":"partial premeiotic DNA re-replication","type":"related"},{"name":"partial premeiotic DNA rereplication","type":"related"}],"termid":"FYPO:0004855"}


id: GO:0046227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,5-trichlorophenoxyacetic acid biosynthetic process (obsolete GO:0046227)","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid anabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid biosynthesis","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid biosynthetic process","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid formation","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid synthesis","type":"exact"}],"termid":"GO:0046227"}


id: MOD:01076
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:00414. Remap to MOD:00414.","definition_xrefs":["DeltaMass:215"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01076 N-methyl arginyl (obsolete MOD:01076)","termid":"MOD:01076"}


id: PBO:0067213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 279, pseudogene","termid":"PBO:0067213"}


id: PBO:0068589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 40, pseudogene","termid":"PBO:0068589"}


id: GO:1990329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex involved in the sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm5s2U) at tRNA wobble positions. In E. coli it consists of a central IscS dimer with the two TusA protomers bound to one of the IscS units each via persulfide (-SSH) groups.","definition_xrefs":["GOC:bhm","PMID:20404999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine desulfurase complex","termid":"GO:1990221"},{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"IscS-TusA complex","termid":"GO:1990329"}


id: PBO:0088634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase","termid":"PBO:0088634"}


id: PBO:0056274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAN1B1 divergent transcript","termid":"PBO:0056274"}


id: PBO:0063471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase complex component X","termid":"PBO:0063471"}


id: PBO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0000746"}


id: PBO:0040508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin","termid":"PBO:0040508"}


id: GO:0021885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another at least one of which is located in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain cell migration","termid":"GO:0021885"}


id: GO:1903598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:25017399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"is_a","term_name":"regulation of gap junction assembly","termid":"GO:1903596"},{"relation_name":"positively_regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gap junction assembly","synonyms":[{"name":"activation of gap junction assembly","type":"narrow"},{"name":"up regulation of gap junction assembly","type":"exact"},{"name":"up-regulation of gap junction assembly","type":"exact"},{"name":"upregulation of gap junction assembly","type":"exact"}],"termid":"GO:1903598"}


id: GO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an atrichoblast, a root epidermal cell that will not give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast differentiation","termid":"GO:0010055"}


id: SO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TTTRTTTACA, bound by transcription factors with a forkhead DNA-binding domain.","definition_xrefs":["PMID:15195092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead_motif","synonyms":[{"name":"forkhead motif","type":"exact"}],"termid":"SO:0001847"}


id: PBO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-Trna Accumulation","termid":"PBO:0002255"}


id: PR:O60124
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP42 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.10","secondary_identifiers":["UniProtKB:O60124"],"synonyms":[{"name":"Spom972h-EXOSC7","type":"exact"},{"name":"ribosomal RNA-processing protein 42 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60124"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["GOC:pz","EC:1.13.11.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["MetaCyc:RXN-12393","RHEA:26401"],"termid":"GO:0102251"}


id: PBO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC13 antisense RNA","termid":"PBO:0050514"}


id: SO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_polycistronic_transcript","termid":"SO:0000690"},{"relation_name":"transcribed_to","term_name":"dicistronic_transcript","termid":"SO:0000079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_transcript","synonyms":[{"name":"gene with dicistronic transcript","type":"exact"}],"termid":"SO:0000692"}


id: PBO:0035832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein-protein_interaction_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0035832"}


id: PBO:0029118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_tapered_cell","termid":"PBO:0029118"}


id: PBO:0069194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 448, pseudogene","termid":"PBO:0069194"}


id: PBO:0055280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2707","termid":"PBO:0055280"}


id: GO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5A serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 5A serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5A receptor binding","type":"exact"},{"name":"type 5A serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031830"}


id: PBO:0055335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2763","termid":"PBO:0055335"}


id: GO:1901754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D3.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D catabolic process","termid":"GO:0042369"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0006766","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"vitamin D3 catabolic process","synonyms":[{"name":"calciol breakdown","type":"exact"},{"name":"calciol catabolic process","type":"exact"},{"name":"calciol catabolism","type":"exact"},{"name":"calciol degradation","type":"exact"},{"name":"cholecalciferol catabolic process","type":"exact"},{"name":"cholecalciferol catabolism","type":"exact"},{"name":"vitamin D3 breakdown","type":"exact"},{"name":"vitamin D3 catabolism","type":"exact"},{"name":"vitamin D3 degradation","type":"exact"}],"termid":"GO:1901754"}


id: PBO:0109378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 9B","termid":"PBO:0109378"}


id: GO:0034119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte aggregation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"},{"relation_name":"is_a","term_name":"regulation of erythrocyte aggregation","termid":"GO:0034118"},{"relation_name":"negatively_regulates","term_name":"erythrocyte aggregation","termid":"GO:0034117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte aggregation","synonyms":[{"name":"negative regulation of RBC aggregation","type":"exact"},{"name":"negative regulation of red blood cell aggregation","type":"exact"}],"termid":"GO:0034119"}


id: GO:1901593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a GW 7647 stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to GW 7647","termid":"GO:1901593"}


id: GO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to a cis-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:18952572","PMID:10681399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid monooxygenase activity","termid":"GO:0008391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arachidonic acid epoxygenase activity","secondary_identifiers":["Reactome:R-HSA-211983"],"synonyms":[{"name":"cytochrome P450 CYP2J5","type":"narrow"},{"name":"cytochrome P450 CYP2J6","type":"narrow"}],"termid":"GO:0008392"}


id: GO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling dorso-laterally into the ectoderm and continuing toward the ventral midline of the belly. These migrating trunk neural crest cells become melanocytes, the melanin-forming pigment cells.","definition_xrefs":["GOC:mat","GOC:bf","PMID:2387238","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsolateral trunk neural crest cell migration","synonyms":[{"name":"dorsolateral trunk NCC migration","type":"exact"}],"termid":"GO:0036485"}


