# terms

id: GO:1902642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:di","PMID:22562153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902641"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"narrow"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902642"}


id: PBO:0080999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 37","termid":"PBO:0080999"}


id: PBO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030981"}


id: MOD:01743
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-128 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"derives_from","term_name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","termid":"MOD:01825"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-128 reporter fragment","type":"exact"}],"termid":"MOD:01743"}


id: PBO:0064759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPIC antisense RNA 1","termid":"PBO:0064759"}


id: PBO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 2","termid":"PBO:0050897"}


id: GO:1904140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:19100238","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell migration","synonyms":[{"name":"down regulation of microglial cell migration","type":"exact"},{"name":"down-regulation of microglial cell migration","type":"exact"},{"name":"downregulation of microglial cell migration","type":"exact"},{"name":"inhibition of microglial cell migration","type":"narrow"}],"termid":"GO:1904140"}


id: PBO:0049371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 1","termid":"PBO:0049371"}


id: GO:0046556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.","definition_xrefs":["EC:3.2.1.55","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"alpha-L-arabinofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.55-RXN"],"synonyms":[{"name":"L-arabinosidase activity","type":"related"},{"name":"alpha-L-arabinanase activity","type":"related"},{"name":"alpha-L-arabinofuranoside arabinofuranohydrolase activity","type":"related"},{"name":"alpha-L-arabinofuranoside hydrolase activity","type":"related"},{"name":"alpha-L-arabinosidase activity","type":"related"},{"name":"alpha-N-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinosidase activity","type":"related"},{"name":"arabinofuranosidase activity","type":"related"},{"name":"arabinosidase activity","type":"related"},{"name":"polysaccharide alpha-L-arabinofuranosidase activity","type":"exact"}],"termid":"GO:0046556"}


id: PBO:0090229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase Aco1","termid":"PBO:0090229"}


id: PBO:0086082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt3p, can instead interact with Pmt2p in some conditions; target for new antifungals","termid":"PBO:0086082"}


id: PBO:0046284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EML2 antisense RNA 1","termid":"PBO:0046284"}


id: GO:0004629
data:
  {"annotated_genes":["SJAG_00321","SJAG_02161","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052712"},{"annotations":[104987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[93941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[89561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_01219":null,"SJAG_02161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phospholipase C activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-399998","Reactome:R-HSA-5362553","Reactome:R-HSA-1112666","GO:0042298","Reactome:R-HSA-114688","Reactome:R-HSA-114689","Reactome:R-HSA-398193"],"synonyms":[{"name":"phosphatidase C","type":"related"}],"termid":"GO:0004629","terms_by_termid":{"GO:0004435":null,"GO:0034479":null,"GO:0052712":null,"GO:0052714":null}}


id: GO:0030341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the eliminative degradation of polysaccharides containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucuronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups.","definition_xrefs":["EC:4.2.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"chondroitin AC lyase activity","secondary_identifiers":["MetaCyc:4.2.2.5-RXN"],"synonyms":[{"name":"ChnAC","type":"related"},{"name":"chondroitin AC eliminase activity","type":"related"},{"name":"chondroitin lyase activity","type":"exact"},{"name":"chondroitin sulfate lyase activity","type":"related"},{"name":"chondroitinase AC","type":"related"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0030341"}


id: GO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iminodiacetate + OH- = H+ + 2 e- + glyoxylate + glycine.","definition_xrefs":["UM-BBD_reactionID:r0589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"iminodiacetate dehydrogenase activity","termid":"GO:0018528"}


id: GO:0032017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Ran protein signal transduction (obsolete GO:0032017)","synonyms":[{"name":"activation of Ran protein signal transduction","type":"narrow"},{"name":"stimulation of Ran protein signal transduction","type":"narrow"},{"name":"up regulation of Ran protein signal transduction","type":"exact"},{"name":"up-regulation of Ran protein signal transduction","type":"exact"},{"name":"upregulation of Ran protein signal transduction","type":"exact"}],"termid":"GO:0032017"}


id: FYPO:0004931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during sporulation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during sporulation","synonyms":[{"name":"normal RNA accumulation during sporulation","type":"related"},{"name":"normal cellular RNA level during sporulation","type":"exact"},{"name":"normal mRNA level during sporulation","type":"narrow"},{"name":"normal transcript level during sporulation","type":"exact"}],"termid":"FYPO:0004931"}


id: PBO:0084469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKKK acting in the protein kinase C signaling pathway; the kinase C signaling pathway controls cell integrity; upon activation by Pkc1p phosphorylates downstream kinases Mkk1p and Mkk2p; MAPKKK is an acronym for mitogen-activated protein (MAP) kinase kinase kinase","termid":"PBO:0084469"}


id: PATO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratification","termid":"PATO:0002067"}


id: GO:0052079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of a host MAP kinase-mediated signal transduction pathway during the host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host MAP kinase-mediated signal transduction pathway (obsolete GO:0052079)","synonyms":[{"name":"activation by organism of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"activation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related MAP kinase-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related host MAPK-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related host mitogen-activated protein kinase-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"stimulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"up regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"up-regulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related host MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by symbiont of defense-related host MAP kinase-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052079"}


id: GO:0043675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The third layer of the sexine.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sculpture element","termid":"GO:0043675"}


id: FYPO:0003386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of superoxide dismutase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000002","FYPO:0005447","FYPO:0000652","FYPO:0000298"],"is_obsolete":false,"name":"increased superoxide dismutase activity","termid":"FYPO:0003386"}


id: GO:0075022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont ethylene-mediated signal transduction during appressorium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ethylene-mediated activation of appressorium formation (obsolete GO:0075022)","termid":"GO:0075022"}


id: FYPO:0005583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains higher levels of saturated fatty acids, and lower levels of unsaturated fatty acids, than normal.","definition_xrefs":["PMID:27053105","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased fatty acid saturation","synonyms":[{"name":"increased fatty acid saturation during mitotic cell cycle","type":"related"},{"name":"increased fatty acid saturation during vegetative growth","type":"exact"},{"name":"increased level of saturated fatty acids and decreased level of unsaturated fatty acids","type":"exact"},{"name":"increased saturated:unsaturated fatty acid ratio","type":"exact"}],"termid":"FYPO:0005583"}


id: GO:0008803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-adenosyl) tetraphosphate + H2O = 2 ADP + 2 H+.","definition_xrefs":["EC:3.6.1.41","RHEA:24252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity","secondary_identifiers":["KEGG_REACTION:R00125","MetaCyc:3.6.1.41-RXN"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"adenosine tetraphosphate phosphodiesterase activity","type":"related"},{"name":"bis(5'-adenosyl) tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine polyphosphate hydrolase activity","type":"related"},{"name":"diadenosine tetraphosphatase (symmetrical)","type":"narrow"},{"name":"diadenosine tetraphosphate hydrolase activity","type":"related"},{"name":"diadenosinetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphate (symmetrical)","type":"related"},{"name":"symmetrical diadenosine tetraphosphate hydrolase activity","type":"related"}],"termid":"GO:0008803"}


id: PBO:0056527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 4 receptor","termid":"PBO:0056527"}


id: FYPO:0007098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing vanadate ions (VO4(3-)).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on vanadate","synonyms":[{"name":"normal cell population growth in presence of vanadate","type":"exact"},{"name":"normal cell population growth on vanadate","type":"exact"},{"name":"normal cell population growth on vanadate ions","type":"exact"},{"name":"normal growth on orthovanadate","type":"exact"},{"name":"normal growth on vanadate(3-)","type":"exact"},{"name":"normal growth on vanadium oxoanion","type":"broad"},{"name":"normal vegetative cell population growth on vanadate","type":"exact"}],"termid":"FYPO:0007098"}


id: RO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_parasite_of","termid":"RO:0002235"}


id: PBO:0082999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic serine hydroxymethyltransferase; converts serine to glycine plus 5,10 methylenetetrahydrofolate; major isoform involved in generating precursors for purine, pyrimidine, amino acid, and lipid biosynthesis","termid":"PBO:0082999"}


id: GO:0140988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ADP from one side of a membrane to the other according to the reaction: ADP(out) + phosphate(in) = ADP(in) + phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ADP:phosphate antiporter activity","secondary_identifiers":["RHEA:65844"],"synonyms":[{"name":"ADP:inorganic phosphate antiporter activity","type":"exact"},{"name":"inorganic phosphate:ADP antiporter activity","type":"exact"}],"termid":"GO:0140988"}


id: PATO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Extremely acute and aggressive onset of a pathological process.","definition_xrefs":["PATOC:PNS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute","termid":"PATO:0000389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peracute","synonyms":[{"name":"per-acute","type":"exact"}],"termid":"PATO:0002387"}


id: PR:P87311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.10c gene.","definition_xrefs":["UniProtKB:P87311","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND-type zinc finger protein C31F10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.10c","synonyms":[{"name":"Spom972h-SPBC31F10.10c","type":"exact"}],"termid":"PR:P87311"}


id: PBO:0058102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4317","termid":"PBO:0058102"}


id: PBO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transporter Zhf1","termid":"PBO:0001380"}


id: PBO:0005258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup61","termid":"PBO:0005258"}


id: GO:1990040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialization of the hypolemmal cisterna consisting of either single profiles or closely apposed stacks of endoplasmic reticulum in which the lumen is obliterated, lying 10-20 nm beneath the plasma membrane.","definition_xrefs":["NIF_Subcellular:sao128470897","ISBN:0195065719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypolemmal cisterna","termid":"GO:1990039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"sub-surface cisterna","synonyms":[{"name":"sub-surface cisternae","type":"exact"}],"termid":"GO:1990040"}


id: PBO:0077462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C divergent transcript","termid":"PBO:0077462"}


id: PBO:0066944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 246","termid":"PBO:0066944"}


id: PBO:0058847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8076","termid":"PBO:0058847"}


id: PBO:0038876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 3","termid":"PBO:0038876"}


id: PBO:0003516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2","termid":"PBO:0003516"}


id: PBO:0087353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor; component of the U4/U6-U5 snRNP complex","termid":"PBO:0087353"}


id: PBO:0061822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 12 Y-linked","termid":"PBO:0061822"}


id: GO:0050729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the inflammatory response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"positively_regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammatory response","synonyms":[{"name":"activation of inflammatory response","type":"narrow"},{"name":"stimulation of inflammatory response","type":"narrow"},{"name":"up regulation of inflammatory response","type":"exact"},{"name":"up-regulation of inflammatory response","type":"exact"},{"name":"upregulation of inflammatory response","type":"exact"}],"termid":"GO:0050729"}


id: PBO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase (predicted)","termid":"PBO:0002560"}


id: PBO:0084692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial dicarboxylate carrier; integral membrane protein, catalyzes a dicarboxylate-phosphate exchange across the inner mitochondrial membrane, transports cytoplasmic dicarboxylates into the mitochondrial matrix","termid":"PBO:0084692"}


id: GO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane conductance regulator activity (obsolete GO:0005396)","synonyms":[{"name":"transmembrane conductance regulator activity","type":"exact"}],"termid":"GO:0005396"}


id: GO:0018662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + NADPH + H+ + O2 = catechol + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenol 2-monooxygenase activity","secondary_identifiers":["MetaCyc:PHENOL-2-MONOOXYGENASE-RXN","RHEA:17061","UM-BBD_enzymeID:e0208"],"synonyms":[{"name":"phenol hydroxylase activity","type":"related"},{"name":"phenol o-hydroxylase activity","type":"related"},{"name":"phenol,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0018662"}


id: FYECO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tacrolimus was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tacrolimus","secondary_identifiers":["FYECO:0000029"],"synonyms":[{"name":"FK506 added","type":"exact"},{"name":"tacrolimus added","type":"exact"}],"termid":"FYECO:0000160"}


id: PBO:0050388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 12","termid":"PBO:0050388"}


id: GO:0036473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to an oxidative stress stimulus.","definition_xrefs":["GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to oxidative stress (obsolete GO:0036473)","termid":"GO:0036473"}


id: SO:0001798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The inner inverted repeat region of a modular centromere and part of the central core surrounding a non-conserved central region. This region is adjacent to the central core, on each chromosome arm.","definition_xrefs":["SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere","termid":"SO:0001795"},{"relation_name":"part_of","term_name":"regional_centromere_central_core","termid":"SO:0001796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_inner_repeat_region","synonyms":[{"name":"lmr repeat","type":"exact"},{"name":"lmr1L","type":"exact"},{"name":"lmr1R","type":"exact"},{"name":"regional centromere inner repeat region","type":"exact"}],"termid":"SO:0001798"}


id: PBO:0072536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 66","termid":"PBO:0072536"}


id: PBO:0087303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI complex-associated protein; involved in 3'-5' degradation of long 3'UTR-containing mRNA, poorly translated mRNA, and other RNA regions devoid of ribosomes; proposed to assist the cytoplasmic exosome in a Ska1-SKI complex when a direct interaction between the ribosome and the SKI complex is absent","termid":"PBO:0087303"}


id: GO:0050763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide biosynthetic process","synonyms":[{"name":"depsipeptide anabolism","type":"exact"},{"name":"depsipeptide biosynthesis","type":"exact"},{"name":"depsipeptide formation","type":"exact"},{"name":"depsipeptide synthesis","type":"exact"}],"termid":"GO:0050763"}


id: GO:0140546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a symbiont that act to protect or prevent damage to the host.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to symbiont","termid":"GO:0140546"}


id: GO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-tryptophan, to form peptidyl-L-6'-bromotryptophan.","definition_xrefs":["RESID:AA0179"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan bromination (obsolete GO:0018080)","termid":"GO:0018080"}


id: GO:0031897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The translocon of the inner envelope of chloroplasts, which facilitates the import of proteins across the chloroplast inner membrane.","definition_xrefs":["PMID:12393016","PMID:12180471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast inner membrane","termid":"GO:0009706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Tic complex","synonyms":[{"name":"chloroplast inner membrane translocase complex","type":"exact"}],"termid":"GO:0031897"}


id: PBO:0090373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated intermembrane lipid transfer protein Atg2","termid":"PBO:0090373"}


id: GO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Kv4.1-DPP6 channel complex","secondary_identifiers":["CORUM:600"],"synonyms":[{"name":"Kv4.1-DPPX channel complex","type":"exact"}],"termid":"GO:0071198"}


id: PBO:0070822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a","termid":"PBO:0070822"}


id: PR:Q8TFG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.02c gene.","definition_xrefs":["UniProtKB:Q8TFG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB15E9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.02c","synonyms":[{"name":"Spom972h-SPAPB15E9.02c","type":"exact"}],"termid":"PR:Q8TFG8"}


id: GO:1904647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["PMID:18538940","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rotenone","termid":"GO:1904647"}


id: GO:0102373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uvaol + NADPH + O2 + H+ = ursolic aldehyde + NADP + 2 H2O.","definition_xrefs":["PMID:22039103","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"uvaol dehydrogenase activity","secondary_identifiers":["EC:1.14.14.126","MetaCyc:RXN-13501"],"termid":"GO:0102373"}


id: PR:Q09723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A multifunctional methyltransferase subunit TRM112-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.02","secondary_identifiers":["UniProtKB:Q09723"],"synonyms":[{"name":"SPAC31A2.02","type":"related"},{"name":"Spom972h-TRMT112","type":"exact"},{"name":"eRF1 MTase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eRF1 methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methyltransferase 112 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09723"}


id: GO:0099018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades the DNA restriction modification system of its host. This process occurs in phages to protein themselves from bacterial restriction enzyme systems. Some viruses encode their own methyltransferase in order to protect their genome from host restriction enzymes. Others directly inhibit restruction enzymes while some use unusual bases in their genome to avoid restriction.","definition_xrefs":["PMID:23979432","PMID:20348932","VZ:3966","PMID:24123737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host restriction-modification system","synonyms":[{"name":"evasion by virus of host restriction-modification system","type":"related"},{"name":"evasion of host restriction-modification system","type":"exact"},{"name":"restriction-modification system evasion by virus","type":"exact"}],"termid":"GO:0099018"}


id: GO:1904253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"positively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of bile acid metabolic process","synonyms":[{"name":"activation of bile acid metabolic process","type":"narrow"},{"name":"activation of bile acid metabolism","type":"narrow"},{"name":"positive regulation of bile acid metabolism","type":"exact"},{"name":"up regulation of bile acid metabolic process","type":"exact"},{"name":"up regulation of bile acid metabolism","type":"exact"},{"name":"up-regulation of bile acid metabolic process","type":"exact"},{"name":"up-regulation of bile acid metabolism","type":"exact"},{"name":"upregulation of bile acid metabolic process","type":"exact"},{"name":"upregulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904253"}


id: PBO:0063232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 18","termid":"PBO:0063232"}


id: GO:1900263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of DNA-directed DNA polymerase activity","termid":"GO:1900262"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"down regulation of DNA duplicase activity","type":"exact"},{"name":"down regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of DNA polymerase I","type":"narrow"},{"name":"down regulation of DNA polymerase II","type":"narrow"},{"name":"down regulation of DNA polymerase III","type":"narrow"},{"name":"down regulation of DNA polymerase V activity","type":"narrow"},{"name":"down regulation of DNA polymerase alpha","type":"narrow"},{"name":"down regulation of DNA polymerase beta","type":"narrow"},{"name":"down regulation of DNA polymerase gamma","type":"narrow"},{"name":"down regulation of DNA replicase activity","type":"exact"},{"name":"down regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down regulation of Klenow fragment","type":"narrow"},{"name":"down regulation of Taq DNA polymerase","type":"narrow"},{"name":"down regulation of Taq Pol I","type":"narrow"},{"name":"down regulation of Tca DNA polymerase","type":"narrow"},{"name":"down regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down regulation of duplicase","type":"broad"},{"name":"down regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down regulation of sequenase","type":"related"},{"name":"down regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of DNA duplicase activity","type":"exact"},{"name":"down-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of DNA polymerase I","type":"narrow"},{"name":"down-regulation of DNA polymerase II","type":"narrow"},{"name":"down-regulation of DNA polymerase III","type":"narrow"},{"name":"down-regulation of DNA polymerase V activity","type":"narrow"},{"name":"down-regulation of DNA polymerase alpha","type":"narrow"},{"name":"down-regulation of DNA polymerase beta","type":"narrow"},{"name":"down-regulation of DNA polymerase gamma","type":"narrow"},{"name":"down-regulation of DNA replicase activity","type":"exact"},{"name":"down-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down-regulation of Klenow fragment","type":"narrow"},{"name":"down-regulation of Taq DNA polymerase","type":"narrow"},{"name":"down-regulation of Taq Pol I","type":"narrow"},{"name":"down-regulation of Tca DNA polymerase","type":"narrow"},{"name":"down-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down-regulation of duplicase","type":"broad"},{"name":"down-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of sequenase","type":"related"},{"name":"down-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"downregulation of DNA duplicase activity","type":"exact"},{"name":"downregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of DNA polymerase I","type":"narrow"},{"name":"downregulation of DNA polymerase II","type":"narrow"},{"name":"downregulation of DNA polymerase III","type":"narrow"},{"name":"downregulation of DNA polymerase V activity","type":"narrow"},{"name":"downregulation of DNA polymerase alpha","type":"narrow"},{"name":"downregulation of DNA polymerase beta","type":"narrow"},{"name":"downregulation of DNA polymerase gamma","type":"narrow"},{"name":"downregulation of DNA replicase activity","type":"exact"},{"name":"downregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"downregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"downregulation of Klenow fragment","type":"narrow"},{"name":"downregulation of Taq DNA polymerase","type":"narrow"},{"name":"downregulation of Taq Pol I","type":"narrow"},{"name":"downregulation of Tca DNA polymerase","type":"narrow"},{"name":"downregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"downregulation of beta DNA polymerase activity","type":"narrow"},{"name":"downregulation of delta DNA polymerase activity","type":"narrow"},{"name":"downregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"downregulation of duplicase","type":"broad"},{"name":"downregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"downregulation of eta DNA polymerase activity","type":"narrow"},{"name":"downregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"downregulation of iota DNA polymerase activity","type":"narrow"},{"name":"downregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"downregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"downregulation of mu DNA polymerase activity","type":"narrow"},{"name":"downregulation of nu DNA polymerase activity","type":"narrow"},{"name":"downregulation of sequenase","type":"related"},{"name":"downregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"downregulation of theta DNA polymerase activity","type":"narrow"},{"name":"downregulation of zeta DNA polymerase activity","type":"narrow"},{"name":"inhibition of DNA duplicase activity","type":"exact"},{"name":"inhibition of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of DNA polymerase I","type":"narrow"},{"name":"inhibition of DNA polymerase II","type":"narrow"},{"name":"inhibition of DNA polymerase III","type":"narrow"},{"name":"inhibition of DNA polymerase V activity","type":"narrow"},{"name":"inhibition of DNA polymerase alpha","type":"narrow"},{"name":"inhibition of DNA polymerase beta","type":"narrow"},{"name":"inhibition of DNA polymerase gamma","type":"narrow"},{"name":"inhibition of DNA replicase activity","type":"exact"},{"name":"inhibition of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"inhibition of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of Klenow fragment","type":"narrow"},{"name":"inhibition of Taq DNA polymerase","type":"narrow"},{"name":"inhibition of Taq Pol I","type":"narrow"},{"name":"inhibition of Tca DNA polymerase","type":"narrow"},{"name":"inhibition of alpha DNA polymerase activity","type":"narrow"},{"name":"inhibition of beta DNA polymerase activity","type":"narrow"},{"name":"inhibition of delta DNA polymerase activity","type":"narrow"},{"name":"inhibition of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic polymerase I","type":"narrow"},{"name":"inhibition of duplicase","type":"broad"},{"name":"inhibition of epsilon DNA polymerase activity","type":"narrow"},{"name":"inhibition of eta DNA polymerase activity","type":"narrow"},{"name":"inhibition of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of iota DNA polymerase activity","type":"narrow"},{"name":"inhibition of kappa DNA polymerase activity","type":"narrow"},{"name":"inhibition of lambda DNA polymerase activity","type":"narrow"},{"name":"inhibition of mu DNA polymerase activity","type":"narrow"},{"name":"inhibition of nu DNA polymerase activity","type":"narrow"},{"name":"inhibition of sequenase","type":"related"},{"name":"inhibition of sigma DNA polymerase activity","type":"narrow"},{"name":"inhibition of theta DNA polymerase activity","type":"narrow"},{"name":"inhibition of zeta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of DNA duplicase activity","type":"exact"},{"name":"negative regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of DNA polymerase I","type":"narrow"},{"name":"negative regulation of DNA polymerase II","type":"narrow"},{"name":"negative regulation of DNA polymerase III","type":"narrow"},{"name":"negative regulation of DNA polymerase V activity","type":"narrow"},{"name":"negative regulation of DNA polymerase alpha","type":"narrow"},{"name":"negative regulation of DNA polymerase beta","type":"narrow"},{"name":"negative regulation of DNA polymerase gamma","type":"narrow"},{"name":"negative regulation of DNA replicase activity","type":"exact"},{"name":"negative regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"negative regulation of Klenow fragment","type":"narrow"},{"name":"negative regulation of Taq DNA polymerase","type":"narrow"},{"name":"negative regulation of Taq Pol I","type":"narrow"},{"name":"negative regulation of Tca DNA polymerase","type":"narrow"},{"name":"negative regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"negative regulation of beta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of delta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"negative regulation of duplicase","type":"broad"},{"name":"negative regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"negative regulation of eta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"negative regulation of iota DNA polymerase activity","type":"narrow"},{"name":"negative regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"negative regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"negative regulation of mu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of nu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of sequenase","type":"related"},{"name":"negative regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"negative regulation of theta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900263"}


id: GO:0032734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-11 production","termid":"GO:0032654"},{"relation_name":"positively_regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-11 production","secondary_identifiers":["GO:0045365","GO:0150171"],"synonyms":[{"name":"activation of interleukin-11 production","type":"narrow"},{"name":"positive regulation of IL-11 production","type":"exact"},{"name":"positive regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-11 secretion","type":"narrow"},{"name":"stimulation of interleukin-11 production","type":"narrow"},{"name":"up regulation of interleukin-11 production","type":"exact"},{"name":"up-regulation of interleukin-11 production","type":"exact"},{"name":"upregulation of interleukin-11 production","type":"exact"}],"termid":"GO:0032734"}


id: GO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of RNA polymerase II transcription preinitiation complex assembly","termid":"GO:0045898"},{"relation_name":"is_a","term_name":"negative regulation of transcription initiation by RNA polymerase II","termid":"GO:0060633"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of RNA polymerase II transcription preinitiation complex assembly","synonyms":[{"name":"down regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"down-regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"downregulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"inhibition of RNA polymerase II transcriptional preinitiation complex assembly","type":"narrow"},{"name":"negative regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"exact"}],"termid":"GO:0017055"}


id: GO:0097509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated guanine where the resulting base (oxanine) is generated by NO- or HNO2-induced nitrosative deamination.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140097","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"oxanine DNA N-glycosylase activity","synonyms":[{"name":"oxanine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097509"}


id: FYPO:0005253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tamoxifen than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to tamoxifen","synonyms":[{"name":"resistance to tamoxifen during mitotic cell cycle","type":"related"},{"name":"resistance to tamoxifen during vegetative growth","type":"exact"},{"name":"resistant to tamoxifen","type":"exact"}],"termid":"FYPO:0005253"}


id: PBO:0042308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 2","termid":"PBO:0042308"}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: GO:1901790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:yaf","MetaCyc:HCAMHPDEG-PWY","MetaCyc:1.13.11.16-RXN","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901790"}


id: GO:0048628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast to attain its fully functional state. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"myoblast development","termid":"GO:0048627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast maturation","termid":"GO:0048628"}


id: FYPO_EXT:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"small fraction of cells (penetrance) or weak phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low","termid":"FYPO_EXT:0000003"}


id: GO:0102766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-naringenin(1-) + S-adenosyl-L-methionine = sakuranetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.232","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"naringenin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7773","RHEA:31539"],"termid":"GO:0102766"}


id: PBO:0044366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 56","termid":"PBO:0044366"}


id: PBO:0053928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1227","termid":"PBO:0053928"}


id: GO:1905040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an otic placode over time, from its formation to the mature structure.","definition_xrefs":["GOC:PARL","GO_REF:0000094","GOC:bf","GOC:mat","GOC:TermGenie","PMID:18356247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode development","termid":"GO:0071696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic placode development","synonyms":[{"name":"auditory placode development","type":"related"},{"name":"ear placode development","type":"related"},{"name":"ear/otic placode development","type":"related"},{"name":"octaval VIII placode development","type":"related"},{"name":"octaval placode development","type":"related"},{"name":"placoda otica development","type":"exact"}],"termid":"GO:1905040"}


id: PBO:0076415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 8","termid":"PBO:0076415"}


id: GO:0071161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-Asp(4-L-Arg)]n-L-Asp + L-arginine = ADP + phosphate + [L-Asp(4-L-Arg)]n+1.","definition_xrefs":["EC:6.3.2.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanophycin synthetase activity","termid":"GO:0043860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"cyanophycin synthetase activity (L-arginine-adding)","secondary_identifiers":["RHEA:23888"],"termid":"GO:0071161"}


id: PBO:0028811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028811"}


id: PATO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid.","definition_xrefs":["wordreference.com:wordreference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wetness","termid":"PATO:0001822"}


id: PBO:0066614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 2B","termid":"PBO:0066614"}


id: GO:0090554
data:
  {"annotated_genes":["SJAG_00669","SJAG_02897","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90603,94105,96345],"is_not":false,"summary":null,"term":"GO:0090554"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["RHEA:38583","GOC:ab","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylcholine transporter activity","type":"broad"},{"name":"ATPase-coupled phosphatidylcholine transporter activity","type":"broad"},{"name":"phosphatidylcholine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylcholine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090554","terms_by_termid":{"GO:0090554":null}}


id: GO:1904438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GOC:kom","GOC:TermGenie","PMID:18353247","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0006810","GO:0098771","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903989"],"synonyms":[{"name":"regulation of ferrous ion import into cell","type":"related"},{"name":"regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"regulation of ferrous iron import into cell","type":"related"}],"termid":"GO:1904438"}


id: PBO:0064066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 100","termid":"PBO:0064066"}


id: GO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transferase activity","synonyms":[{"name":"down regulation of transferase activity","type":"exact"},{"name":"down-regulation of transferase activity","type":"exact"},{"name":"downregulation of transferase activity","type":"exact"},{"name":"inhibition of transferase activity","type":"narrow"},{"name":"transferase inhibitor","type":"exact"}],"termid":"GO:0051348"}


id: GO:0031358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of chloroplast outer membrane (obsolete GO:0031358)","synonyms":[{"name":"intrinsic to chloroplast outer membrane","type":"narrow"}],"termid":"GO:0031358"}


id: GO:0070288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds iron and acts as a major iron storage system. Intracellular and extracellular ferritin complexes have different ratios of two types of ferritin monomer, the L (light) chain and H (heavy) chain.","definition_xrefs":["PMID:19154717","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ferritin complex","termid":"GO:0070288"}


id: PBO:0027528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_aseptate_cell_with_mitotic_cell_cycle_arrest_in_G2_before_cell_separation","termid":"PBO:0027528"}


id: GO:0019302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-ribose, (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-ribose biosynthetic process","synonyms":[{"name":"D-ribose anabolism","type":"exact"},{"name":"D-ribose biosynthesis","type":"exact"},{"name":"D-ribose formation","type":"exact"},{"name":"D-ribose synthesis","type":"exact"}],"termid":"GO:0019302"}


id: GO:0071239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a streptomycin stimulus. Streptomycin is a commonly used antibiotic in cell culture media which acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to streptomycin","termid":"GO:0046679"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to streptomycin","termid":"GO:0071239"}


id: FYPO:0003921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"increased replication fork arrest at rDNA repeats","synonyms":[{"name":"increased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"increased replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003921"}


id: PBO:0074676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 60","termid":"PBO:0074676"}


id: GO:0034082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polyketide synthase complex that consists of several different polypeptide chains, each of which catalyzes a single reaction.","definition_xrefs":["GOC:cb","GOC:mah","PMID:12636085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide synthase complex","termid":"GO:0034081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type II polyketide synthase complex","synonyms":[{"name":"type II PKS","type":"exact"},{"name":"type II PKS complex","type":"exact"},{"name":"type II polyketide synthase","type":"exact"}],"termid":"GO:0034082"}


id: GO:0048599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"oocyte differentiation","termid":"GO:0009994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte development","termid":"GO:0048599"}


id: PBO:0029027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitotic_spindle","termid":"PBO:0029027"}


id: PBO:0054748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2157","termid":"PBO:0054748"}


id: GO:0050882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary musculoskeletal movement","termid":"GO:0050882"}


id: PBO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine synthase reductase (predicted)","termid":"PBO:0001398"}


id: PBO:0003978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase His5","termid":"PBO:0003978"}


id: GO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular epithelial cell over time, from its formation to the mature structure. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell development","termid":"GO:0072310"}


id: PR:Q10498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hgh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein HGH1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.12c","synonyms":[{"name":"Spom972h-hgh1","type":"exact"}],"termid":"PR:Q10498"}


id: GO:2000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of male gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of male gonad development","termid":"GO:2000018"},{"relation_name":"positively_regulates","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male gonad development","synonyms":[{"name":"positive regulation of testicular development","type":"exact"},{"name":"positive regulation of testis development","type":"exact"}],"termid":"GO:2000020"}


id: PBO:0087894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription elongation factor with a conserved zinc finger domain; implicated in the maintenance of proper chromatin structure in actively transcribed regions; deletion inhibits Brome mosaic virus (BMV) gene expression","termid":"PBO:0087894"}


id: SO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2'-O-methylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylinosine","secondary_identifiers":["RNAMOD:081"],"synonyms":[{"name":"2'-O-methylinosine","type":"exact"},{"name":"Im","type":"exact"},{"name":"two prime O methylinosine","type":"exact"}],"termid":"SO:0001280"}


id: PBO:0082968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for sporulation","termid":"PBO:0082968"}


id: GO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid outer membrane","termid":"GO:0009527"}


id: GO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of catecholamine neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine uptake","termid":"GO:0090493"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"catecholamine neurotransmitter import into glial cell","type":"narrow"},{"name":"catecholamine neurotransmitter import into neuron","type":"narrow"},{"name":"catecholamine neurotransmitter recycling","type":"broad"},{"name":"catecholamine neurotransmitter reuptake","type":"exact"},{"name":"catecholamine reuptake during transmission of nerve impulse","type":"related"},{"name":"catecholamine uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051934"}


id: GO:0072753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glutathione stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to glutathione","termid":"GO:1901370"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glutathione","termid":"GO:0072753"}


id: FYPO:0005275
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115560,115593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115705,115704,115703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic cell cycle phase transition normally.","definition_xrefs":["GO:0044772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330","SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["mad2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005275","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: GO:0008141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A glue which attaches the pupae to the substrate during metamorphosis, as in, but not restricted to, the true flies (Diptera, ncbi_taxonomy_id:7147).","definition_xrefs":["PMID:825230"],"gene_count":0,"genotype_count":0,"name":"obsolete puparial glue (sensu Diptera) (obsolete GO:0008141)","synonyms":[{"name":"puparial glue (sensu Diptera)","type":"exact"}],"termid":"GO:0008141"}


id: GO:0044242
data:
  {"annotated_genes":["SJAG_01036","SJAG_04973","SJAG_02763","SJAG_00413","SJAG_04311","SJAG_00199","SJAG_03604","SJAG_02161","SJAG_00706","SJAG_02100","SJAG_01519","SJAG_03204","SJAG_02093","SJAG_00321","SJAG_00622","SJAG_01219","SJAG_02091","SJAG_00519","SJAG_02543","SJAG_04292","SJAG_02089","SJAG_04110","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88744,93851,110014],"is_not":false,"summary":null,"term":"GO:0044242"},{"annotations":[77364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046464"},{"annotations":[107999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[87635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[86322,97671,88055,110906,88064,96968,99137,93940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[90100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046461"},{"annotations":[113118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[90101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[98015,92108,89558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009395"},{"annotations":[96158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[104985,86033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"},{"annotations":[113702,90215,88070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipids, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_00413":null,"SJAG_00519":null,"SJAG_00622":null,"SJAG_00706":null,"SJAG_01036":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02543":null,"SJAG_02763":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04311":null,"SJAG_04954":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"cellular lipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular lipid breakdown","type":"exact"},{"name":"cellular lipid catabolism","type":"exact"},{"name":"cellular lipid degradation","type":"exact"}],"termid":"GO:0044242","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0006660":null,"GO:0009062":null,"GO:0009395":null,"GO:0016095":null,"GO:0019433":null,"GO:0034638":null,"GO:0044242":null,"GO:0046461":null,"GO:0046464":null,"GO:0046475":null,"GO:0046521":null}}


id: PBO:0061229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 1","termid":"PBO:0061229"}


id: PBO:0046068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 3","termid":"PBO:0046068"}


id: PBO:0041778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1 pseudogene 1","termid":"PBO:0041778"}


id: PBO:0062437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 101 pseudogene","termid":"PBO:0062437"}


id: MOD:01413
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a trihydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trihydroxylated residue","termid":"MOD:01409"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trihydroxylated leucine","synonyms":[{"name":"Hy3Leu","type":"exact"}],"termid":"MOD:01413"}


id: FYPO:0003278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, morphology, or physical characteristics of all or part of the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane during vegetative growth","synonyms":[{"name":"abnormal plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003278"}


id: FYPO:0003944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thioredoxin peroxidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal thioredoxin peroxidase activity","termid":"FYPO:0003943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased thioredoxin peroxidase activity","termid":"FYPO:0003944"}


id: PR:Q9Y7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-hydroxyacyl-CoA lyase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18968:SF6","PRO:DNx","OMA:SCHPO02766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.04","secondary_identifiers":["UniProtKB:Q9Y7M1"],"synonyms":[{"name":"Spom972h-HACL1","type":"exact"}],"termid":"PR:Q9Y7M1"}


id: GO:0048899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line over time, from its formation to the mature structure. The anterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The anterior lateral line develops from cranial ectodermal placodes situated between the eye and ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line development","termid":"GO:0048882"},{"relation_name":"part_of","term_name":"anterior lateral line system development","termid":"GO:0048898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line development","synonyms":[{"name":"anterior LL development","type":"exact"}],"termid":"GO:0048899"}


id: PBO:0046872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule C","termid":"PBO:0046872"}


id: PBO:0061564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' nucleotidase, ecto-like, pseudogene","termid":"PBO:0061564"}


id: PBO:0028432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytogamy","termid":"PBO:0028432"}


id: PBO:0004673
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperornithinemia","termid":"PBO:0004673"}


id: GO:1990730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex between the ATPase VCP (p97) and its cofactor p47 (NSFL1C). In human, the protein complex consists of one homotrimer of NSFL1C/p47 per homohexamer of VCP/p97.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:9214505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"VCP-NSFL1C complex","synonyms":[{"name":"p97-p47 complex","type":"exact"}],"termid":"GO:1990730"}


id: GO:2000181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"negatively_regulates","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"}


id: PBO:0069222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 477, pseudogene","termid":"PBO:0069222"}


id: PBO:0056272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2 pseudogene 1","termid":"PBO:0056272"}


id: GO:0103057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A19 + O2 + 2-oxoglutarate = H+ + gibberellin A20 + 2 carbon dioxide + succinate.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin A19, 2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN1F-169"],"termid":"GO:0103057"}


id: GO:0102909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD + 2-hydroxyglutarate = H+ + 2-oxoglutarate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ketoglutarate reductase activity (NADH-dependent) (obsolete GO:0102909)","termid":"GO:0102909"}


id: GO:0014720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within tonic skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The tonic skeletal muscle is characterized by long lasting contractile responses and high resistance to fatigue.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tonic skeletal muscle contraction","termid":"GO:0014720"}


id: PATO:0001444
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being broken open.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wholeness","termid":"PATO:0001442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broken","secondary_identifiers":["PATO:0001443","PATO:0001820"],"synonyms":[{"name":"burst","type":"exact"},{"name":"cracked","type":"related"},{"name":"fractured","type":"exact"},{"name":"fragmented","type":"exact"},{"name":"hemorrhaged","type":"related"},{"name":"ruptured","type":"exact"},{"name":"split","type":"related"},{"name":"torn","type":"related"}],"termid":"PATO:0001444"}


id: PBO:0045353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOP1 leucine zipper like protein B","termid":"PBO:0045353"}


id: GO:1904707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:23246467","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell proliferation","termid":"GO:0048661"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"activation of VSMC proliferation","type":"narrow"},{"name":"activation of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"positive regulation of VSMC proliferation","type":"exact"},{"name":"positive regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up regulation of VSMC proliferation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"up-regulation of VSMC proliferation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"upregulation of VSMC proliferation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904707"}


id: PR:Q9HDY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt71 gene.","definition_xrefs":["UniProtKB:Q9HDY0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.10c","synonyms":[{"name":"Spom972h-ypt71","type":"exact"}],"termid":"PR:Q9HDY0"}


id: FYPO:0004826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is significantly lower than the range in wild type cells, and continues to decrease over successive meiotic generations (i.e. cycles of mating, meiosis, sporulation, spore germination and vegetative growth).","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rDNA copy number","termid":"FYPO:0004823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"progressively decreasing rDNA copy number during successive meiotic generations","synonyms":[{"name":"progressively decreasing rDNA copy number over successive meiotic generations","type":"exact"},{"name":"progressively decreasing ribosomal DNA copy number during successive meiotic generations","type":"exact"},{"name":"progressively shortening rDNA through meiotic generations","type":"related"}],"termid":"FYPO:0004826"}


id: PBO:0063627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 3","termid":"PBO:0063627"}


id: PBO:0061174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 4-1","termid":"PBO:0061174"}


id: PBO:0067147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 197, pseudogene","termid":"PBO:0067147"}


id: PBO:0050856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 1","termid":"PBO:0050856"}


id: SO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified valine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_valine","secondary_identifiers":["MOD:00920"],"synonyms":[{"name":"ModVal","type":"exact"},{"name":"modified L valine","type":"exact"},{"name":"modified L-valine","type":"exact"}],"termid":"SO:0001403"}


id: PBO:0084602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR391W was originally annotated as an independent ORF, but was completely contained in larger ORF YLR391W-A in the same frame, and was merged into it on 7-30-1997","termid":"PBO:0084602"}


id: PBO:0011447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec3","termid":"PBO:0011447"}


id: PBO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase B","termid":"PBO:0051702"}


id: GO:0061048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"}


id: GO:0030849
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any chromosome other than a sex chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"autosome","secondary_identifiers":["Wikipedia:Autosome"],"termid":"GO:0030849"}


id: GO:0051781
data:
  {"annotated_genes":["SJAG_00845","SJAG_01188","SJAG_00514","SJAG_01805","SJAG_01114","SJAG_03704","SJAG_03581","SJAG_04666","SJAG_03936","SJAG_04468","SJAG_00082","SJAG_02392","SJAG_04776","SJAG_05290","SJAG_03631","SJAG_02838","SJAG_01787","SJAG_03342","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90584,86201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[90585,106692,83761,90752,109531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[89983,86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[115641,92030,106935,86964,99863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[85447,89984,101328,109532,103205,111612,88597,102534,86070,114007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[83762,88598,90588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"positively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell division","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of cell division","type":"narrow"},{"name":"stimulation of cell division","type":"narrow"},{"name":"up regulation of cell division","type":"exact"},{"name":"up-regulation of cell division","type":"exact"},{"name":"upregulation of cell division","type":"exact"}],"termid":"GO:0051781","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903490":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: PBO:0066073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 1","termid":"PBO:0066073"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: _global:has_output_o_axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the axis_of relation","definition_xrefs":["GOC:mtg_berkeley_2012_08_27","GOC:dph","GOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_axis_of","secondary_identifiers":["GOREL:0001002"],"termid":"_global:has_output_o_axis_of"}


id: PBO:0045530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2 pseudogene 1","termid":"PBO:0045530"}


id: PBO:0057000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 92b","termid":"PBO:0057000"}


id: FYPO:0000648
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115293,115294,115297,115427],"is_not":false,"summary":null,"term":"FYPO:0000648"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but has an abnormally low volume. Note that small viable cells may result from a cell cycle size regulation defect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02013":null,"SJAG_03048":null,"SJAG_04280":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"viable small vegetative cell","references_by_uniquename":{"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02013","SJAG_04280","SJAG_03048"],"single_locus_genotype_uniquenames":["cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mitosis with small cell size","type":"related"},{"name":"reduced size at cell division","type":"related"},{"name":"small viable vegetative cell","type":"exact"},{"name":"viable small cell during vegetative growth","type":"exact"},{"name":"viable small vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000648","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0017045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of corticotropin-releasing hormone (CRH), any of a number of peptides released by the mammalian hypothalamus into the hypophyseal-portal circulation in response to neural and/or chemical stimuli. Upon receptor binding, CRH increases the rate of corticotropin secretion by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"corticotropin-releasing hormone activity","secondary_identifiers":["Wikipedia:Corticotropin-releasing_hormone"],"synonyms":[{"name":"adrenocorticotropin-releasing hormone","type":"exact"}],"termid":"GO:0017045"}


id: PBO:0077736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 3","termid":"PBO:0077736"}


id: GO:0043873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.","definition_xrefs":["PMID:6352705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyruvate-flavodoxin oxidoreductase activity","secondary_identifiers":["MetaCyc:PYFLAVOXRE-RXN","RHEA:44140"],"synonyms":[{"name":"NifJ","type":"related"},{"name":"pyruvate:flavodoxin oxidoreductase activity","type":"exact"}],"termid":"GO:0043873"}


id: PBO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe CAF-1 First subunit","termid":"PBO:0001595"}


id: PBO:0111773
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DNL","termid":"PBO:0111773"}


id: PBO:0049026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 6","termid":"PBO:0049026"}


id: GO:0021601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the abducens nerve to attain its fully functional state. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve maturation","synonyms":[{"name":"CN VI maturation","type":"related"}],"termid":"GO:0021601"}


id: GO:0060202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted acetylcholine transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted acetylcholine transport vesicle","termid":"GO:0060200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle lumen","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle lumen","type":"exact"}],"termid":"GO:0060202"}


id: PBO:0109406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ontology_root_term","termid":"PBO:0109406"}


id: PBO:0016877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniprot_identifier","termid":"PBO:0016877"}


id: PBO:0061395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephronectin","termid":"PBO:0061395"}


id: PBO:0079266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 38","termid":"PBO:0079266"}


id: PBO:0070940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 48","termid":"PBO:0070940"}


id: PBO:0056091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g2","termid":"PBO:0056091"}


id: GO:0044682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = 7,8-dihydroneopterin 2',3'-cyclic phosphate + diphosphate + formate + H+. This activity is part of the biosynthesis of methanopterin in Archaea, and requires Fe2+.","definition_xrefs":["RHEA:25860","GOC:mengo_curators","PMID:17497938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"GTP cyclohydrolase IV activity","secondary_identifiers":["EC:3.5.4.39"],"synonyms":[{"name":"Fe(2+)-dependent archaeal-specific GTP cyclohydrolase activity","type":"exact"},{"name":"MptA activity","type":"narrow"},{"name":"archaeal-specific GTP cyclohydrolase activity","type":"exact"}],"termid":"GO:0044682"}


id: GO:0071745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and sometimes complexed with J chain or J chain and secretory component. An IgA immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgA immunoglobulin complex","synonyms":[{"name":"IgA1 antibody","type":"narrow"},{"name":"IgA2 antibody","type":"narrow"}],"termid":"GO:0071745"}


id: PBO:0070072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 29, pseudogene","termid":"PBO:0070072"}


id: PBO:0067988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 290","termid":"PBO:0067988"}


id: GO:0014733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle adaptation","synonyms":[{"name":"regulation of skeletal muscle plasticity","type":"related"}],"termid":"GO:0014733"}


id: GO:0102370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lupeol + NADPH(4-) + O2 + H+ = betulin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lupeol 28-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-13497"],"termid":"GO:0102370"}


id: PBO:0091575
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by mouse HUS1","termid":"PBO:0091575"}


id: GO:0050857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"positively_regulates","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of antigen receptor-mediated signaling pathway","synonyms":[{"name":"activation of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of antigen receptor mediated signalling pathway","type":"exact"},{"name":"stimulation of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"up regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"up-regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"upregulation of antigen receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0050857"}


id: GO:0106282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta,7beta-dihydroxy-5beta-cholan-24-oate + NAD+ = 3beta-hydroxy-7-oxo-5beta-cholan-24-oate + H+ + NADH.","definition_xrefs":["PMID:12917011","RHEA:42024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106282"}


id: SO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone of a DNA region of a genome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"genomic_DNA","termid":"SO:0000991"},{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_clone","synonyms":[{"name":"genomic clone","type":"exact"}],"termid":"SO:0000040"}


id: GO:0019229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction","termid":"GO:0019229"}


id: PBO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit Cut14","termid":"PBO:0004246"}


id: PBO:0039063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGK divergent transcript","termid":"PBO:0039063"}


id: PBO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain protein","termid":"PBO:0000462"}


id: SO:1001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001255 status_of_coding_sequence (obsolete SO:1001255)","termid":"SO:1001255"}


id: PBO:0048227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GADD45G interacting protein 1","termid":"PBO:0048227"}


id: GO:0006281
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id: GO:0010469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a signaling receptor activity. Receptor activity is when a molecule combines with an extracellular or intracellular messenger to initiate a change in cell activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of signaling receptor activity","synonyms":[{"name":"regulation of receptor activity","type":"broad"},{"name":"regulation of signalling receptor activity","type":"exact"}],"termid":"GO:0010469"}


id: PBO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit Sac3","termid":"PBO:0090713"}


id: GO:0085016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Exit from dormant state, also known as resuscitation, of the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy exit of symbiont in host","synonyms":[{"name":"resuscitation of symbiont","type":"exact"}],"termid":"GO:0085016"}


id: GO:0035736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to compound eye morphogenesis.","definition_xrefs":["GOC:sart","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}


id: GO:0006053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine catabolic process","termid":"GO:0046346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine catabolic process","synonyms":[{"name":"N-acetylmannosamine breakdown","type":"exact"},{"name":"N-acetylmannosamine catabolism","type":"exact"},{"name":"N-acetylmannosamine degradation","type":"exact"}],"termid":"GO:0006053"}


id: GO:0043260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha5, beta2 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-11 complex","synonyms":[{"name":"laminin-521 complex","type":"exact"}],"termid":"GO:0043260"}


id: MOD:00168
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to N-(aspart-1-yl)-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0159","PubMed:7120400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-aspartyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIAsp","type":"exact"},{"name":"LIPID GPI-anchor amidated aspartate","type":"exact"},{"name":"N-aspartyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00168"}


id: PBO:0059836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 1 like","termid":"PBO:0059836"}


id: FYPO:0008195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3-KMe binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3 binding","termid":"FYPO:0007158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"decreased histone H3-K9Me binding","termid":"FYPO:0008195"}


id: GO:1904952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a hydroxycinnamic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:26744218","GO_REF:0000065","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"hydroxycinnamic acid transport","termid":"GO:1904952"}


id: PBO:0068895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 137, pseudogene","termid":"PBO:0068895"}


id: PBO:0049897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine inducible ER protein with ubiquitin like domain 1","termid":"PBO:0049897"}


id: PBO:0045083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like non-canonical Notch ligand 2","termid":"PBO:0045083"}


id: PBO:0086330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with WD-40 repeats involved in rRNA processing; associates with rDNA chromatin in H4-tail-dependent manner; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily","termid":"PBO:0086330"}


id: GO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosamine 6-phosphate + H2O = D-tagatose 6-phosphate + NH3.","definition_xrefs":["PMID:10931310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"galactosamine-6-phosphate isomerase activity","synonyms":[{"name":"AgaI","type":"related"},{"name":"galactosamine-6-phosphate deaminase activity","type":"exact"}],"termid":"GO:0043877"}


id: FYPO:0004691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a sphere, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spherical vegetative cell","termid":"FYPO:0000947"},{"relation_name":"is_a","term_name":"inviable swollen spheroid vegetative cell","termid":"FYPO:0002190"},{"relation_name":"is_a","term_name":"inviable spherical vegetative cell","termid":"FYPO:0004104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen spherical vegetative cell","synonyms":[{"name":"inviable enlarged spherical vegetative cell","type":"related"},{"name":"inviable enlarged volume spherical vegetative cell","type":"exact"},{"name":"inviable large spherical vegetative cell","type":"related"},{"name":"inviable swollen spherical cell during vegetative growth","type":"exact"},{"name":"inviable swollen spherical vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased spherical vegetative cell size","type":"related"},{"name":"inviable, increased spherical vegetative cell volume","type":"exact"},{"name":"lethal; swollen spherical vegetative cell","type":"exact"}],"termid":"FYPO:0004691"}


id: PBO:0090583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated ATP-dependent RNA helicase Prp28","termid":"PBO:0090583"}


id: PBO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by carbon dioxide","termid":"PBO:0001106"}


id: PBO:0076484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARBP2 pseudogene 1","termid":"PBO:0076484"}


id: PBO:0055353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2782","termid":"PBO:0055353"}


id: GO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.","definition_xrefs":["PMID:23945166","PMID:14570576","GOC:kmv","PMID:22118932","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intraciliary transport particle","synonyms":[{"name":"IFT complex","type":"related"},{"name":"intraflagellar transport complex","type":"exact"},{"name":"intraflagellar transport particle","type":"exact"}],"termid":"GO:0030990"}


id: PBO:0070845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 24","termid":"PBO:0070845"}


id: GO:0035841
data:
  {"annotated_genes":["SJAG_02916","SJAG_04901","SJAG_02838","SJAG_05285","SJAG_04566","SJAG_00152","SJAG_01290","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85636,87756,93041,95475,106927,108938,110533,111962],"is_not":false,"summary":null,"term":"GO:0035841"}]},"cv_name":"cellular_component","definition":"A cell tip that was newly formed at the last cell division, and that has started to grow after the cell has activated bipolar cell growth (i.e. in which new end take-off, NETO, has taken place). New end take-off is when monopolar cells initiate bipolar growth.","definition_xrefs":["GOC:expert_jd","GOC:mah","PMID:19431238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growing cell tip","termid":"GO:0035838"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00424":null,"SJAG_01290":null,"SJAG_02838":null,"SJAG_02916":null,"SJAG_04566":null,"SJAG_04901":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"new growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"new cell tip after activation of bipolar cell growth","type":"exact"},{"name":"post-NETO new cell end","type":"exact"},{"name":"post-NETO new cell tip","type":"exact"},{"name":"post-new end take-off new cell tip","type":"exact"}],"termid":"GO:0035841","terms_by_termid":{"GO:0035841":null}}


id: PBO:0045892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 4","termid":"PBO:0045892"}


id: PBO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 7","termid":"PBO:0072130"}


id: PBO:0088510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein AdoMet-dependent proline dimethyltransferase Tae1","termid":"PBO:0088510"}


id: GO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a salty taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of salty taste","synonyms":[{"name":"salty taste perception","type":"exact"}],"termid":"GO:0050914"}


id: PBO:0078032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 22","termid":"PBO:0078032"}


id: GO:0005997
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xylulose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xylulose metabolism","type":"exact"}],"termid":"GO:0005997","terms_by_termid":{"GO:0005998":null}}


id: PBO:0085165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl homoserine-O-acetyl serine sulfhydrylase; required for methionine and cysteine biosynthesis","termid":"PBO:0085165"}


id: RO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"}


id: PBO:0042414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26","termid":"PBO:0042414"}


id: PBO:0027354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyruvate_decarboxylase_activity_during_stationary_phase","termid":"PBO:0027354"}


id: GO:0035568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal proline of proteins.","definition_xrefs":["PMID:20668449","RESID:AA0419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-proline methylation","termid":"GO:0035568"}


id: PBO:0085217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyl transferase involved in protein palmitoylation; acts as a negative regulator of pheromone response pathway; required for endocytosis of pheromone receptors; involved in cell shape control; contains ankyrin repeats; AKR1 has a paralog, AKR2, that arose from the whole genome duplication; any of several human homologs encoding DHHC-type zinc fingers (ZDHHC) can complement temperature sensitivity of yeast akr1 null mutant","termid":"PBO:0085217"}


id: PBO:0027890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_mitotic_spindle_microtubules_to_kinetochore","termid":"PBO:0027890"}


id: PBO:0047329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas binding factor 1","termid":"PBO:0047329"}


id: PBO:0034091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_positively_regulating","termid":"PBO:0034091"}


id: PBO:0031812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_biofilm_formation","termid":"PBO:0031812"}


id: PBO:0041907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene C","termid":"PBO:0041907"}


id: FYPO:0005513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is increased during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"},{"relation_name":"is_a","term_name":"increased protein localization to centromere during meiotic cell cycle","termid":"FYPO:0005598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to kinetochore during meiosis","synonyms":[{"name":"increased protein localisation to kinetochore during meiosis","type":"exact"},{"name":"increased protein localization to kinetochore during meiotic nuclear division","type":"exact"},{"name":"increased protein localization to meiotic kinetochore","type":"exact"}],"termid":"FYPO:0005513"}


id: PBO:0057307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-2","termid":"PBO:0057307"}


id: GO:0003246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cardiac muscle cell during the embryonic period, that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"is_a","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth involved in heart morphogenesis","termid":"GO:0003245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic cardiac muscle cell growth involved in heart morphogenesis","synonyms":[{"name":"embryonic cardiac muscle physiological hypertrophy","type":"exact"}],"termid":"GO:0003246"}


id: GO:0039529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding ssRNA or dsRNA from another organism to the cytoplasmic pattern recognition receptor (PRR) RIG-1 (also known as DDX58). RIG-I detects RNA synthesized during viral replication or shed by non-viral pathogens, and triggers a signaling pathway to protect the host against infection, for example by inducing the expression of cytokines.","definition_xrefs":["PMID:25579795","PMID:17328678","PMID:19620789","GOC:bf","PMID:21435580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"RIG-I signaling pathway","synonyms":[{"name":"DDX58 signaling pathway","type":"exact"},{"name":"RIG-I signalling pathway","type":"exact"},{"name":"RIG-I-like receptor (RLR) signaling pathway","type":"exact"},{"name":"RIG-like helicase signaling pathway","type":"exact"},{"name":"RIG-like receptor signaling pathway","type":"exact"},{"name":"RLH signaling pathway","type":"exact"},{"name":"RLR signaling pathway","type":"exact"},{"name":"retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039529"}


id: FYPO:0006601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is normal (i.e. indistinguishable from wild type during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to centromeric chromatin during mitotic metaphase","synonyms":[{"name":"normal protein localisation to centromeric chromatin during mitotic metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric chromatin during metaphase during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006601"}


id: PBO:0046377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 1","termid":"PBO:0046377"}


id: FYPO:0000814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolus organization is abnormal. Nucleolus organization results in the assembly, arrangement of constituent parts, or disassembly of the nucleolus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleus organization","termid":"FYPO:0000810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleolus organization","synonyms":[{"name":"abnormal nucleolus organisation","type":"exact"},{"name":"abnormal nucleolus organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolus organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000814"}


id: GO:0018867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature. It is a major component in tea-tree oils, and gives off a piney smelling odor.","definition_xrefs":["UM-BBD_pathwayID:apn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-pinene metabolic process","synonyms":[{"name":"alpha-pinene metabolism","type":"exact"}],"termid":"GO:0018867"}


id: PBO:0050806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTT antisense RNA","termid":"PBO:0050806"}


id: FYPO:0007027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to medial cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007027"}


id: PBO:0066423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention in endoplasmic reticulum sorting receptor 1","termid":"PBO:0066423"}


id: PBO:0088306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus1","termid":"PBO:0088306"}


id: FYPO:0000610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through S phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic S phase progression","synonyms":[{"name":"abnormal S phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic S phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in S","type":"exact"},{"name":"mitotic cell cycle progression in S phase: abnormal","type":"related"}],"termid":"FYPO:0000610"}


id: GO:1901863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"positively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle tissue development","synonyms":[{"name":"activation of muscle tissue development","type":"narrow"},{"name":"up regulation of muscle tissue development","type":"exact"},{"name":"up-regulation of muscle tissue development","type":"exact"},{"name":"upregulation of muscle tissue development","type":"exact"}],"termid":"GO:1901863"}


id: GO:0034875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeine + O2 + 2 H+ + 2 e- = 1,3,7-trimethyluric acid + H2O.","definition_xrefs":["RHEA:47148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"caffeine oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r1321","EC:1.17.5.2"],"termid":"GO:0034875"}


id: GO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits, inhibin beta-A and inhibin beta-B (sometimes known as activin beta or activin/inhibin beta). There are three forms of activin complex, activin A, which is composed of 2 inhibin beta-A subunits, activin B, which is composed of 2 inhibin beta-B subunits, and activin AB, which is composed of an inhibin beta-A and an inhibin beta-B subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"activin complex","termid":"GO:0048180"}


id: PBO:0050642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 7, pseudogene","termid":"PBO:0050642"}


id: PBO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 like","termid":"PBO:0070744"}


id: GO:0018228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine to form peptidyl-S-geranylgeranylcysteine; formation of S-geranylgeranyl-L-cysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CAAX motif and methyl esterification of the geranylgeranylated cysteine; methyl esterification but not cleavage occurs for the CXC motif. For the type II geranylgeranyltransferase the residue may be found at the first and final positions in the sequence motif C-X-C* or at the final position in the sequence motif C-C*. These motifs are necessary but not sufficient for modification.","definition_xrefs":["RESID:AA0104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-geranylgeranyl-L-cysteine biosynthetic process from peptidyl-cysteine","synonyms":[{"name":"peptidyl-S-geranylgeranyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018228"}


id: GO:1903935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium arsenite stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18674524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"},{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"response to salt","termid":"GO:1902074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sodium arsenite","termid":"GO:1903935"}


id: PBO:0071818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 13","termid":"PBO:0071818"}


id: PBO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_export_from_nucleus","termid":"PBO:0031851"}


id: FYPO:0008077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylserine binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid binding","termid":"FYPO:0005307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased phosphatidylserine binding","termid":"FYPO:0008077"}


id: PBO:0072511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 40","termid":"PBO:0072511"}


id: GO:2000182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of progesterone biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"progesterone biosynthetic process","termid":"GO:0006701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of progesterone biosynthetic process","synonyms":[{"name":"regulation of progesterone anabolism","type":"exact"},{"name":"regulation of progesterone biosynthesis","type":"exact"},{"name":"regulation of progesterone formation","type":"exact"},{"name":"regulation of progesterone synthesis","type":"exact"}],"termid":"GO:2000182"}


id: GO:0032337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin secretion","termid":"GO:0032335"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"positively_regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of activin secretion","synonyms":[{"name":"activation of activin secretion","type":"narrow"},{"name":"stimulation of activin secretion","type":"narrow"},{"name":"up regulation of activin secretion","type":"exact"},{"name":"up-regulation of activin secretion","type":"exact"},{"name":"upregulation of activin secretion","type":"exact"}],"termid":"GO:0032337"}


id: GO:0033535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah","MetaCyc:CPD-8066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ajugose metabolic process","synonyms":[{"name":"ajugose metabolism","type":"exact"}],"termid":"GO:0033535"}


id: GO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth or movement in a sessile organism toward or away from water, as of the roots of a plant.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrotropism","secondary_identifiers":["Wikipedia:Hydrotropism"],"termid":"GO:0010274"}


id: PR:O60069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase swf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.07","synonyms":[{"name":"Spom972h-swf1","type":"exact"}],"termid":"PR:O60069"}


id: GO:0035039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion at fertilization of the inactive sperm nucleus into a male pronucleus with its chromosomes processed for the first zygotic division.","definition_xrefs":["PMID:11735001","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"male pronucleus assembly","synonyms":[{"name":"male pronucleus formation","type":"related"}],"termid":"GO:0035039"}


id: PBO:0080800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 6","termid":"PBO:0080800"}


id: PR:000027558
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A that is a translation product of the Schizosaccharomyces pombe 972h- hta1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha","synonyms":[{"name":"H2A.1","type":"broad"},{"name":"hta1","type":"exact"}],"termid":"PR:000027558"}


id: GO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone.","definition_xrefs":["RHEA:12364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydronicotinamide riboside quinone reductase activity","secondary_identifiers":["EC:1.10.5.1","Reactome:R-HSA-8936519","MetaCyc:1.10.99.2-RXN"],"synonyms":[{"name":"N-ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"related"},{"name":"NQO2","type":"related"},{"name":"NQO2 activity","type":"related"},{"name":"NRH:quinone oxidoreductase 2 activity","type":"narrow"},{"name":"QR2 activity","type":"related"},{"name":"quinone reductase 2 activity","type":"related"},{"name":"ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"exact"}],"termid":"GO:0001512"}


id: PBO:0027192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_equatorial_microtubule_organizing_center_present_in_decreased_numbers","termid":"PBO:0027192"}


id: GO:1900277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteinase activated receptor activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of proteinase activated receptor activity","termid":"GO:1900276"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of proteinase activated receptor activity","synonyms":[{"name":"down regulation of proteinase activated receptor activity","type":"exact"},{"name":"down-regulation of proteinase activated receptor activity","type":"exact"},{"name":"downregulation of proteinase activated receptor activity","type":"exact"},{"name":"inhibition of proteinase activated receptor activity","type":"narrow"}],"termid":"GO:1900277"}


id: PBO:0074979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-21","termid":"PBO:0074979"}


id: GO:0106009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(4S)-4-hydroxy-2-oxoglutarate = pyruvate + glyoxylate.","definition_xrefs":["PMID:1339418","EC:4.1.3.42","PMID:1098660","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(4S)-4-hydroxy-2-oxoglutarate aldolase activity","secondary_identifiers":["RHEA:35639"],"termid":"GO:0106009"}


id: PBO:0086737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086737"}


id: PBO:0064099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 1","termid":"PBO:0064099"}


id: PBO:0085347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; required for efficient acyl chain remodeling of newly synthesized phosphatidylethanolamine-derived phosphatidylcholine; required for deacylation of phosphatidylcholine and phosphatidylethanolamine but not phosphatidylinositol; PLB1 has a paralog, PLB3, that arose from the whole genome duplication","termid":"PBO:0085347"}


id: GO:1905342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to kinetochore.","definition_xrefs":["GO_REF:0000058","PMID:22581055","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to kinetochore","termid":"GO:1905340"},{"relation_name":"positively_regulates","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to kinetochore","synonyms":[{"name":"activation of condensin localization to kinetochore","type":"narrow"},{"name":"activation of protein localisation to kinetochore","type":"narrow"},{"name":"activation of protein localization to kinetochore","type":"narrow"},{"name":"positive regulation of condensin localization to kinetochore","type":"narrow"},{"name":"positive regulation of protein localisation to kinetochore","type":"exact"},{"name":"up regulation of condensin localization to kinetochore","type":"narrow"},{"name":"up regulation of protein localisation to kinetochore","type":"exact"},{"name":"up regulation of protein localization to kinetochore","type":"exact"},{"name":"up-regulation of condensin localization to kinetochore","type":"narrow"},{"name":"up-regulation of protein localisation to kinetochore","type":"exact"},{"name":"up-regulation of protein localization to kinetochore","type":"exact"},{"name":"upregulation of condensin localization to kinetochore","type":"narrow"},{"name":"upregulation of protein localisation to kinetochore","type":"exact"},{"name":"upregulation of protein localization to kinetochore","type":"exact"}],"termid":"GO:1905342"}


id: PBO:0076780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEA domain transcription factor 3","termid":"PBO:0076780"}


id: GO:0043590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a bacterial cell to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial nucleoid","termid":"GO:0043590"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: FYPO:0004259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["GO:0007095","PomBase:mah","PMID:21098122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abolished G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004259"}


id: PBO:0029473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_tapered_vegetative_cell","termid":"PBO:0029473"}


id: PATO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001131 absolute ratio value (obsolete PATO:0001131)","termid":"PATO:0001131"}


id: PBO:0087548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA domain of TFIIIC that binds BoxA DNA promoter sites of tRNA and similar genes; has TPR motifs; human homolog is TFIIIC-102","termid":"PBO:0087548"}


id: FYPO:0002493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA 5'-adenosine monophosphate hydrolase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0005447","FYPO:0000002","FYPO:0000654"],"is_obsolete":false,"name":"decreased DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"reduced DNA 5'-adenosine monophosphate hydrolase activity","type":"exact"}],"termid":"FYPO:0002493"}


id: PBO:0038952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIPOQ antisense RNA 1","termid":"PBO:0038952"}


id: GO:0006368
data:
  {"annotated_genes":["SJAG_00913","SJAG_03118","SJAG_03481","SJAG_04933","SJAG_00914","SJAG_02873","SJAG_02314","SJAG_00150","SJAG_03211","SJAG_00293","SJAG_02416","SJAG_00320","SJAG_03006","SJAG_04353","SJAG_03944","SJAG_00139","SJAG_00540","SJAG_02238","SJAG_00925","SJAG_02698","SJAG_01610","SJAG_02393","SJAG_01713","SJAG_00119","SJAG_02551","SJAG_04257","SJAG_04670","SJAG_02319","SJAG_03128","SJAG_02209","SJAG_02691","SJAG_03061","SJAG_03967","SJAG_01149","SJAG_01151","SJAG_01707","SJAG_04038","SJAG_00483","SJAG_02097"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88150,88820,90128,91387,95310,96076,101658,102318,102980,103865,104054,107642,109354,110231,110554],"is_not":false,"summary":null,"term":"GO:0006368"},{"annotations":[97933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001193"},{"annotations":[114046],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034244"},{"annotations":[102195,105204,99217,113137,91983,101517,111445],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032968"},{"annotations":[104945,110700,90783,112364,86270,91659,99724,88560,87421,113048,114947,104950,107434,89566,109776],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01713":null,"SJAG_02097":null,"SJAG_02209":null,"SJAG_02238":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_02551":null,"SJAG_02691":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03944":null,"SJAG_03967":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04353":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA elongation from Pol II promoter","type":"exact"},{"name":"RNA polymerase II transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase II promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006368","terms_by_termid":{"GO:0001193":null,"GO:0006368":null,"GO:0032968":null,"GO:0034244":null,"GO:0140673":null}}


id: PBO:0067806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 108","termid":"PBO:0067806"}


id: GO:0042311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the internal diameter of blood vessels, especially arterioles or capillaries, due to relaxation of smooth muscle cells that line the vessels, and usually resulting in a decrease in blood pressure.","definition_xrefs":["GOC:pr","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation","secondary_identifiers":["GO:0045909","Wikipedia:Vasodilation"],"synonyms":[{"name":"positive regulation of blood vessel size","type":"exact"},{"name":"vasodilatation","type":"exact"}],"termid":"GO:0042311"}


id: PATO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000572 relative length value (obsolete PATO:0000572)","termid":"PATO:0000572"}


id: GO:0030669
data:
  {"annotated_genes":["SJAG_00800","SJAG_01167","SJAG_02805","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104496,107754,92433,107813],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated endocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-coated endocytic vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030669","terms_by_termid":{"GO:0030122":null}}


id: PR:Q9P3V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C1348.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.03","synonyms":[{"name":"Spom972h-SPBC1348.03","type":"exact"}],"termid":"PR:Q9P3V7"}


id: MOD:00077
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to asymmetric dimethylarginine, N(omega),N(omega)-dimethyl-L-arginine.","definition_xrefs":["PubMed:11152131","PubMed:15835918","Unimod:36#R","PubMed:3032834","PubMed:12964758","PubMed:14570711","ChEBI:17929","RESID:AA0068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"asymmetric dimethyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-([(dimethylamino)(imino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES Asymmetric dimethylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"N5-[(dimethylamino)(imino)methyl]ornithine","type":"exact"},{"name":"NG,NG-dimethylarginine","type":"exact"},{"name":"NoNoMe2Arg","type":"exact"},{"name":"asymmetric dimethylarginine","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"omega-N,omega-N-dimethlyated L-arginine","type":"exact"},{"name":"omega-N,omega-N-dimethyl-L-arginine","type":"exact"}],"termid":"MOD:00077"}


id: PBO:0079086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 3-1","termid":"PBO:0079086"}


id: _global:hyperparasite_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"_global:has_host"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasite_of","secondary_identifiers":["RO:0002553"],"synonyms":[{"name":"epiparasite of","type":"related"},{"name":"hyperparasitoid of","type":"narrow"}],"termid":"_global:hyperparasite_of"}


id: PBO:0027686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_branched,_elongated_cell","termid":"PBO:0027686"}


id: GO:0140348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of lysophosphatidylcholine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:26945070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140303","GO:0005215"],"is_obsolete":false,"name":"lysophosphatidylcholine flippase activity","synonyms":[{"name":"lysophosphatidylcholine flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140348"}


id: PBO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA1-like protein","termid":"PBO:0002127"}


id: PBO:0027225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_vegetative_cell","termid":"PBO:0027225"}


id: PBO:0046005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1B antisense RNA 1","termid":"PBO:0046005"}


id: GO:0071696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal placode development","termid":"GO:0071696"}


id: SOFP:ontology_term
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A term from some ontology classifying the feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ontology_term","termid":"SOFP:ontology_term"}


id: PBO:0077092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 7","termid":"PBO:0077092"}


id: RO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_endoparasite","termid":"RO:0002635"}


id: PR:000050543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:33534698","PMID:27227887","PomBase:VW","PPRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr1 (Schizosaccharomyces pombe)","termid":"PR:000050541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr1/GTP+","pombase_gene_id":"SPBC337.13c","synonyms":[{"name":"Spom-gtr1/GTP+","type":"exact"},{"name":"gtr1/GTP+","type":"exact"},{"name":"Gtr1/GTP+","type":"exact"}],"termid":"PR:000050543"}


id: PBO:0083950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the translation initiation factor eIF2; involved in the identification of the start codon; binds GTP when forming the ternary complex with GTP and tRNAi-Met; mutations in human ortholog cause X-linked intellectual disability (XLID) syndrome","termid":"PBO:0083950"}


id: PBO:0112182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional GLNase (glutamine amidotransferase)/CPSase (carbamoylphosphate synthetase)/ATCase (aspartate transcarbamoylase) Ura1","termid":"PBO:0112182"}


id: PBO:0089187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1","termid":"PBO:0089187"}


id: PBO:0005404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial morphology protein (predicted)","termid":"PBO:0005404"}


id: GO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of N-terminal peptidyl-serine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine deamination","termid":"GO:0018059"}


id: GO:0051756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the centromeres of sister chromatids are physically detached from each other during meiosis.","definition_xrefs":["PMID:14730319","PMID:16325576","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere separation","termid":"GO:0034510"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"},{"relation_name":"part_of","term_name":"meiotic sister chromatid separation","termid":"GO:0051757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic sister chromatid centromere separation","termid":"GO:0051756"}


id: GO:0009672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: auxin(out) + H+(out) = auxin(in) + H+(in).","definition_xrefs":["PMID:8688077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"auxin:proton symporter activity","synonyms":[{"name":"auxin:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009672"}


id: GO:2000236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"negatively_regulates","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tRNA processing","synonyms":[{"name":"negative regulation of tRNA maturation","type":"exact"}],"termid":"GO:2000236"}


id: PBO:0045696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 3","termid":"PBO:0045696"}


id: PBO:0073166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS binding protein 2","termid":"PBO:0073166"}


id: PBO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex, non-SMC subunit Psc3","termid":"PBO:0001304"}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0010467","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: PBO:0087056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L27A; homologous to mammalian ribosomal protein L27, no bacterial homolog; RPL27A has a paralog, RPL27B, that arose from the whole genome duplication","termid":"PBO:0087056"}


id: PBO:0079877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3B regulator of nonsense mediated mRNA decay","termid":"PBO:0079877"}


id: GO:0008643
data:
  {"annotated_genes":["SJAG_04068","SJAG_03608","SJAG_04905","SJAG_02958","SJAG_03606","SJAG_03820","SJAG_00339","SJAG_03960","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58959],"is_not":false,"summary":null,"term":"GO:0008643"},{"annotations":[60452,57457,88666,58070,110327,60417,113333,64235,62249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034219"},{"annotations":[106819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[110332,106820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[110333,113337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[99143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008645"},{"annotations":[91945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[91946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00339":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"carbohydrate transport","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006861","GO:0008644"],"synonyms":[{"name":"sugar transport","type":"narrow"}],"termid":"GO:0008643","terms_by_termid":{"GO:0008643":null,"GO:0008645":null,"GO:0034219":null,"GO:0046323":null,"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: GO:0016751
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004149"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"S-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016751","terms_by_termid":{"GO:0004149":null}}


id: MOD:00622
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["DeltaMass:80","Unimod:303","PubMed:12442261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine mercaptoethanol","synonyms":[{"name":"Beta mercaptoethanol adduct","type":"exact"},{"name":"Cysteine mercaptoethanol","type":"related"},{"name":"DeStreak","type":"related"}],"termid":"MOD:00622"}


id: PBO:0063764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain containing endocytic trafficking adaptor 1","termid":"PBO:0063764"}


id: PR:O14200
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pxa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.07c","synonyms":[{"name":"Spom972h-pxa1","type":"exact"}],"termid":"PR:O14200"}


id: GO:0060102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen and cuticulin-based noncellular, multilayered structure that is synthesized by an underlying ectodermal (hypodermal) cell layer. The cuticle serves essential functions in body morphology, locomotion, and environmental protection. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:dph","ISSN:15518507","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060102"}


id: GO:1902718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of sequestering of copper ion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:3099306"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of copper ion (obsolete GO:1902718)","synonyms":[{"name":"sequestering of copper ion","type":"exact"}],"termid":"GO:1902718"}


id: GO:0052391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of a flux of calcium ions that occurs as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host calcium ion flux (obsolete GO:0052391)","synonyms":[{"name":"activation by organism of host Ca2+ flux","type":"exact"},{"name":"activation by organism of host calcium ion flux","type":"exact"},{"name":"activation by symbiont of defense-related host calcium ion flux","type":"exact"},{"name":"induction by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by organism of host Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related host Ca2+ flux","type":"related"},{"name":"positive regulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"stimulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"up regulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"up-regulation by symbiont of defense-related host calcium ion flux","type":"related"},{"name":"upregulation by symbiont of defense-related host calcium ion flux","type":"related"}],"termid":"GO:0052391"}


id: PBO:0078856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 4","termid":"PBO:0078856"}


id: PBO:0046102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 5","termid":"PBO:0046102"}


id: PBO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidotransferase (predicted)","termid":"PBO:0000355"}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: PBO:0047192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 209 member B","termid":"PBO:0047192"}


id: PBO:0041756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP1 pseudogene 1","termid":"PBO:0041756"}


id: PBO:0082021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member A, cell cycle regulator pseudogene 1","termid":"PBO:0082021"}


id: GO:0099535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular matrix of the perisynaptic space (the extracellular space adjacent to the synapse) and the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synapse-associated extracellular matrix","synonyms":[{"name":"extra-synaptic extracellular matrix","type":"exact"}],"termid":"GO:0099535"}


id: PBO:0076201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 11","termid":"PBO:0076201"}


id: PBO:0088118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; member of the serine carboxypeptidase family; N-glycosylated","termid":"PBO:0088118"}


id: GO:0044842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lumen of a gut granule, a lysosome-related organelle contained within the intestinal cells of the nematode C. elegans.","definition_xrefs":["PMID:24204312","GOC:kmv","PMID:22916203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"gut granule","termid":"GO:0044840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"gut granule lumen","termid":"GO:0044842"}


id: FYPO:0007287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the galactosylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal. Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["GO:0042125","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein glycosylation during vegetative growth","termid":"FYPO:0001911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein galactosylation during vegetative growth","synonyms":[{"name":"decreased protein galactosylation during mitotic cell cycle","type":"related"},{"name":"reduced protein galactosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007287"}


id: GO:0008268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein tyrosine kinase signaling protein activity (obsolete GO:0008268)","synonyms":[{"name":"receptor signaling protein tyrosine kinase signaling protein activity","type":"exact"},{"name":"receptor signalling protein tyrosine kinase signalling protein activity","type":"exact"}],"termid":"GO:0008268"}


id: PBO:0063926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 5","termid":"PBO:0063926"}


id: GO:0014719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change of a skeletal muscle satellite cell from a mitotically quiescent to a mitotically active state following exposure to some activating factor such as a cellular or soluble ligand. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["PMID:23303905","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell activation","termid":"GO:0014719"}


id: PBO:0049055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 55","termid":"PBO:0049055"}


id: GO:0047758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylpropanoate + ATP = 2-methylpropanoyl phosphate + ADP + H+.","definition_xrefs":["EC:2.7.2.14","RHEA:24156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP:2-methylpropanoate phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R04002","MetaCyc:BRANCHED-CHAIN-FATTY-ACID-KINASE-RXN"],"synonyms":[{"name":"ATP:2-methylpropanoate 1-phosphotransferase activity","type":"exact"},{"name":"ATP:2-methylpropanoate kinase activity","type":"exact"},{"name":"ATP:branched-chain-fatty-acid 1-phosphotransferase activity","type":"broad"},{"name":"ATP:isobutyrate 1-phosphotransferase activity","type":"exact"},{"name":"branched-chain fatty acid kinase activity","type":"broad"},{"name":"branched-chain-fatty-acid kinase activity","type":"broad"},{"name":"isobutyrate kinase activity","type":"broad"}],"termid":"GO:0047758"}


id: PATO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or downward.","direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrorse","termid":"PATO:0002237"}


id: GO:1904063
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87398,109530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cation transmembrane transport.","definition_xrefs":["PMID:15304482","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"negatively_regulates","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cation transmembrane transport","type":"exact"},{"name":"down-regulation of cation transmembrane transport","type":"exact"},{"name":"downregulation of cation transmembrane transport","type":"exact"},{"name":"inhibition of cation transmembrane transport","type":"narrow"}],"termid":"GO:1904063","terms_by_termid":{"GO:1905949":null}}


id: PBO:0084109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein of the Hsp70 family; localized in mitochondrial nucleoids, plays a role in protein translocation, interacts with Mge1p in an ATP-dependent manner; overexpression induces extensive mitochondrial DNA aggregations; ECM10 has a paralog, SSC1, that arose from the whole genome duplication","termid":"PBO:0084109"}


id: PBO:0089971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA-binding protein Vts1","termid":"PBO:0089971"}


id: PBO:0051533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3 receptor subunit alpha","termid":"PBO:0051533"}


id: MOD:01963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine.","definition_xrefs":["RESID:AA0607","PubMed:23030644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DATDGlc) serine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-serine","type":"exact"},{"name":"O-[N,N-diacetylbacillosaminyl]serine","type":"exact"},{"name":"O-[N2,N4-diacetylbacillosaminyl]serine","type":"exact"}],"termid":"MOD:01963"}


id: FYPO:0000048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which invasive growth does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth abolished (obsolete FYPO:0000048)","synonyms":[{"name":"absent invasive growth","type":"exact"},{"name":"invasive growth abolished during vegetative growth","type":"exact"},{"name":"invasive growth: absent","type":"related"}],"termid":"FYPO:0000048"}


id: FYPO:0002643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clotrimazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on clotrimazole","synonyms":[{"name":"normal cell population growth in presence of clotrimazole","type":"exact"},{"name":"normal cell population growth on clotrimazole","type":"exact"},{"name":"normal cellular response to clotrimazole","type":"related"},{"name":"normal vegetative cell population growth on clotrimazole","type":"exact"}],"termid":"FYPO:0002643"}


id: GO:0048292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to IgD biosynthesis, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and IgD constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:12370374","ISBN:0781735149","PMID:2113175","PMID:9186655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"isotype switching to IgD isotypes","synonyms":[{"name":"class switching to IgD isotypes","type":"exact"},{"name":"isotype switch recombination to IgD isotypes","type":"exact"}],"termid":"GO:0048292"}


id: GO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-tryptophan, to form peptidyl-L-3-hydroxytryptophan.","definition_xrefs":["RESID:AA0322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tryptophan hydroxylation","termid":"GO:0045325"}


id: PBO:0066546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9 binding protein","termid":"PBO:0066546"}


id: PBO:0029580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_low_temperature","termid":"PBO:0029580"}


id: GO:1990633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of punctate focus localized to the perinuclear region of germline cytoplasm in C. elegans. Mutator foci are required for RNA interference (RNAi) and serve as sites of small inhibitory RNA (siRNA) amplification. As such, proteins that localize to mutator foci include RNA-directed RNA polymerases (RdRPs) and beta-nucleotidyltransferases. Mutator foci are distinct from, but adjacent to or partially overlap, P granules.","definition_xrefs":["GOC:kmv","PMID:22713602","PMID:25635455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mutator focus","termid":"GO:1990633"}


id: PBO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 13","termid":"PBO:0050103"}


id: GO:0071463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a humidity stimulus, moisture in the atmosphere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"},{"relation_name":"is_a","term_name":"cellular response to water stimulus","termid":"GO:0071462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to humidity","termid":"GO:0071463"}


id: PBO:0002960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphate synthase Tps2 (predicted)","termid":"PBO:0002960"}


id: GO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of encysted zoospore germination","termid":"GO:0075227"},{"relation_name":"is_a","term_name":"negative regulation of spore germination","termid":"GO:1904360"},{"relation_name":"negatively_regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of encysted zoospore germination","synonyms":[{"name":"negative regulation of encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075229"}


id: PBO:0027490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation","termid":"PBO:0027490"}


id: GO:1990465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction a long-chain aldehyde + O2 + 2 NADPH = an alkane + formate + H2O + 2 NADP+.","definition_xrefs":["PMID:22947199","RHEA:21440","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"aldehyde oxygenase (deformylating) activity","secondary_identifiers":["EC:4.1.99.5"],"termid":"GO:1990465"}


id: PBO:0081559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 483","termid":"PBO:0081559"}


id: PBO:0086583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; detected in highly purified mitochondria in high-throughput studies; proposed to be involved in resistance to mechlorethamine and streptozotocin; null mutant sensitive to expression of top1-T722A allele","termid":"PBO:0086583"}


id: PBO:0035848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_import_into_nucleus_during_vegetative_growth","termid":"PBO:0035848"}


id: PBO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis","termid":"PBO:0031266"}


id: GO:1900402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of carbohydrate metabolic process.","definition_xrefs":["GOC:mah","PMID:16408318","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900402)","synonyms":[{"name":"regulation of carbohydrate metabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900402"}


id: GO:0051283
data:
  {"annotated_genes":["SJAG_00321","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"negatively_regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sequestering of calcium ion","type":"exact"},{"name":"down-regulation of sequestering of calcium ion","type":"exact"},{"name":"downregulation of sequestering of calcium ion","type":"exact"},{"name":"inhibition of sequestering of calcium ion","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"negative regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051283","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: GO:0007471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which the anatomical structures of the first or anterior segment of the insect thorax are generated and organized.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete prothoracic morphogenesis (obsolete GO:0007471)","synonyms":[{"name":"prothoracic morphogenesis","type":"exact"}],"termid":"GO:0007471"}


id: FYPO:0002806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenate ions. Cells stop growing (and may die) at a concentration of arsenate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to arsenate","synonyms":[{"name":"hypersensitive to arsenate","type":"exact"},{"name":"sensitive to arsenate during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenate during vegetative growth","type":"exact"},{"name":"sensitive to arsenate ions","type":"exact"}],"termid":"FYPO:0002806"}


id: PBO:0109106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial UbiB/ABC kinase -like family family membrane protein contact site protein Cqd1","termid":"PBO:0109106"}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["Unimod:442#S","RESID:AA0350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: GO:0099502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulatory process by which increased cytosolic calcium levels lead to the the fusion of synaptic vesicles with the presynaptic active zone membrane by bringing primed synaptic vesicle membrane into contact with membrane presynaptic active zone membrane.","definition_xrefs":["PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031632"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024","GO:0023052"],"is_obsolete":false,"name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: GO:0090282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle.","definition_xrefs":["PMID:10899128","PMID:10959837","GOC:rn","PMID:10894548","PMID:10747051"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G2/M transition of mitotic cell cycle (obsolete GO:0090282)","synonyms":[{"name":"activation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"activation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"},{"name":"positive regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during G2/M transition of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0090282"}


id: PBO:0050399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 4","termid":"PBO:0050399"}


id: PBO:0086766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability","termid":"PBO:0086766"}


id: PBO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunity Seh1","termid":"PBO:0014249"}


id: GO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell, caused by a virus stopping, preventing, or reducing peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["GOC:bm","PMID:28894177","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via suppression of host peptidoglycan biosynthetic process","synonyms":[{"name":"cytolysis by virus via suppression of host peptidoglycan biosynthetic process","type":"related"},{"name":"viral exit by cytolysis via suppression of host peptidoglycan biosynthetic process","type":"exact"},{"name":"viral release by cytolysis via suppression of host peptidoglycan biosynthetic process","type":"exact"}],"termid":"GO:0039640"}


id: PBO:0062513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily J member 2 (gene/pseudogene)","termid":"PBO:0062513"}


id: GO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}


id: PBO:0054142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1508","termid":"PBO:0054142"}


id: GO:0010033
data:
  {"annotated_genes":["SJAG_03340","SJAG_04904","SJAG_00219","SJAG_01858","SJAG_02444","SJAG_02419","SJAG_00766","SJAG_00790","SJAG_03841","SJAG_04026","SJAG_02960","SJAG_04612","SJAG_01134","SJAG_00226","SJAG_04262","SJAG_04283","SJAG_02923","SJAG_03815","SJAG_01585","SJAG_00131","SJAG_04429","SJAG_05022","SJAG_01457","SJAG_01584","SJAG_00941","SJAG_02233","SJAG_02539","SJAG_04312","SJAG_01768","SJAG_01556","SJAG_02601","SJAG_05274","SJAG_01345","SJAG_04384","SJAG_01737","SJAG_01516","SJAG_00173","SJAG_00948","SJAG_01709","SJAG_01754","SJAG_02685","SJAG_04435","SJAG_04345","SJAG_01254","SJAG_00574","SJAG_02010","SJAG_00403","SJAG_00931","SJAG_05256","SJAG_01718","SJAG_03081","SJAG_00270","SJAG_04471","SJAG_03611","SJAG_02694","SJAG_00530","SJAG_04567","SJAG_03209","SJAG_00552","SJAG_07000","SJAG_03227","SJAG_04187","SJAG_00993","SJAG_03482","SJAG_00627","SJAG_03657","SJAG_03032","SJAG_00681","SJAG_02774","SJAG_04571","SJAG_00990","SJAG_01978","SJAG_01162","SJAG_06611","SJAG_01160","SJAG_04118","SJAG_00126","SJAG_03153","SJAG_01051","SJAG_04583","SJAG_03345","SJAG_01699","SJAG_04103","SJAG_02341","SJAG_01626","SJAG_00564","SJAG_00054","SJAG_01854","SJAG_00472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112713,111672,105694,103001,102645,90400,102053,98003,105182],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[108896],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[101194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[109670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[101372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[101361,106175,108455,100367,84302,106174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[99086,106176,106177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[104167,109791,105816,106501,105918],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[112926,94877,113354,113508,90667,97391,89120,85866,105740,109978,103335,110367,112179,110235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[105741,99087,112005,104275,113281,88189,100129,84026,90668,91156,87580,93137,88876,111913,94392,99569,100887,109151,104338,100973,85745,96922,89746,109930,111336,109636,112745,89265,85867,101447,103840,86151,112544,90889,108143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[99638,91713],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[84027,109152,99570,85467],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[85715,89266],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[84556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"},{"annotations":[112568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[86617,107023],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"},{"annotations":[85440,88362,89495,93220,92551,102428],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[103295,84368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"},{"annotations":[101677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000749"},{"annotations":[89121,85469],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[91889,89724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.","definition_xrefs":["PMID:23356676","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 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to organic substance","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990367"],"synonyms":[{"name":"process resulting in tolerance to organic substance","type":"narrow"}],"termid":"GO:0010033","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0010619":null,"GO:0030968":null,"GO:0030970":null,"GO:0031990":null,"GO:0034514":null,"GO:0034620":null,"GO:0036245":null,"GO:0036498":null,"GO:0036503":null,"GO:0046294":null,"GO:0071218":null,"GO:0071244":null,"GO:0071507":null,"GO:0071629":null,"GO:0071630":null,"GO:0097466":null,"GO:0110095":null,"GO:0140041":null,"GO:0180027":null}}


id: FYPO:0006142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transition from G0 phase (quiescence) to G1 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal G0 to G1 transition","synonyms":[{"name":"normal exit from cell quiescence","type":"exact"}],"termid":"FYPO:0006142"}


id: GO:0033867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein.","definition_xrefs":["EC:2.7.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0004672","GO:0003674","GO:0016301","GO:0140096"],"is_obsolete":false,"name":"Fas-activated serine/threonine kinase activity","secondary_identifiers":["MetaCyc:2.7.11.8-RXN"],"synonyms":[{"name":"ATP:Fas-activated serine/threonine protein phosphotransferase activity","type":"related"},{"name":"FAST","type":"related"},{"name":"FASTK","type":"related"},{"name":"STK10","type":"related"}],"termid":"GO:0033867"}


id: PBO:0091852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting lincRNA Ste11 repressor","termid":"PBO:0091852"}


id: PBO:0058488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5682","termid":"PBO:0058488"}


id: GO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acidic epididymal glycoprotein (obsolete GO:0005191)","synonyms":[{"name":"acidic epididymal glycoprotein","type":"exact"}],"termid":"GO:0005191"}


id: GO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 catechol + 3 O2 = 2 dibenzo[1,4]dioxin-2,3-dione + 6 H2O.","definition_xrefs":["MetaCyc:CATECHOL-OXIDASE-DIMERIZING-RXN","EC:1.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"catechol oxidase (dimerizing) activity","secondary_identifiers":["RHEA:12809"],"synonyms":[{"name":"catechol:oxygen oxidoreductase (dimerizing)","type":"related"}],"termid":"GO:0047731"}


id: GO:1900032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trichome patterning","synonyms":[{"name":"regulation of trichome distribution","type":"broad"},{"name":"regulation of trichome pattern biosynthesis","type":"exact"},{"name":"regulation of trichome pattern formation","type":"exact"},{"name":"regulation of trichome pattern specification","type":"related"},{"name":"regulation of trichome spacing","type":"exact"}],"termid":"GO:1900032"}


id: PBO:0004739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx4","termid":"PBO:0004739"}


id: MOD:01693
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha amino or imino hydrogen with a (pyrid-3-yl)acetyl group.","definition_xrefs":["Unimod:25#N-term","PubMed:9276974","OMSSA:107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridylacetylated residue","termid":"MOD:00418"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"alpha-amino pyridylacetylated residue","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"ntermpeppyridyl","type":"exact"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:01693"}


id: PBO:0077210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 1","termid":"PBO:0077210"}


id: PR:C6Y4D0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor C16C4.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.22","secondary_identifiers":["UniProtKB:C6Y4D0"],"synonyms":[{"name":"Spom972h-POLE4","type":"exact"}],"termid":"PR:C6Y4D0"}


id: PBO:0062432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 94 pseudogene","termid":"PBO:0062432"}


id: PBO:0035726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0035726"}


id: GO:0032628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-24 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-24 production","secondary_identifiers":["GO:0072622","GO:0045524"],"synonyms":[{"name":"ST16 production","type":"narrow"},{"name":"IL-24 production","type":"exact"},{"name":"MDA7 production","type":"narrow"},{"name":"interleukin-24 biosynthetic process","type":"narrow"},{"name":"interleukin-24 secretion","type":"narrow"}],"termid":"GO:0032628"}


id: PBO:0054461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1858","termid":"PBO:0054461"}


id: PBO:0042977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 3","termid":"PBO:0042977"}


id: PBO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 2","termid":"PBO:0061290"}


id: PBO:0062995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 1","termid":"PBO:0062995"}


id: PBO:0041424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 putative open reading frame 44","termid":"PBO:0041424"}


id: PBO:0071091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 93","termid":"PBO:0071091"}


id: FYPO:0001203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of coflocculation. In coflocculation, yeast cells coaggregate with cells of another species, usually bacteria.","definition_xrefs":["PomBase:mah","PMID:11472912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"coflocculating cells","synonyms":[{"name":"co-flocculating cells","type":"exact"},{"name":"increased coflocculation","type":"exact"}],"termid":"FYPO:0001203"}


id: PBO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-partner_in","termid":"PBO:0034041"}


id: PBO:0111897
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B box","termid":"PBO:0111897"}


id: PBO:0027852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_resection_during_replication_fork_processing","termid":"PBO:0027852"}


id: GO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Neurotransmitter secretion that occurs in the absence of the action of a secretagogue or a presynaptic action potential.","definition_xrefs":["PMID:21334193","GOC:dph","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"spontaneous synaptic transmission","termid":"GO:0098814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"spontaneous neurotransmitter secretion","synonyms":[{"name":"stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:0061669"}


id: GO:0008446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H2O.","definition_xrefs":["EC:4.2.1.47","RHEA:23820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase activity","secondary_identifiers":["Reactome:R-HSA-6787632","KEGG_REACTION:R00888","MetaCyc:GDPMANDEHYDRA-RXN"],"synonyms":[{"name":"GDP-D-mannose 4,6-dehydratase activity","type":"related"},{"name":"GDP-D-mannose dehydratase activity","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase (GDP-4-dehydro-6-deoxy-D-mannose-forming)","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase activity","type":"related"},{"name":"GDPmannose 4,6-dehydratase activity","type":"related"},{"name":"Gmd","type":"related"},{"name":"guanosine 5'-diphosphate-D-mannose oxidoreductase activity","type":"related"},{"name":"guanosine diphosphomannose 4,6-dehydratase activity","type":"related"},{"name":"guanosine diphosphomannose oxidoreductase activity","type":"related"}],"termid":"GO:0008446"}


id: MOD:01420
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the carbonyl of the preceding residue to form a thiazole or thiazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"oxazole/thiazole ring crosslinked residues","termid":"MOD:00690"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"}


id: PBO:0076662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thromboxane A1 receptor","termid":"PBO:0076662"}


id: FYPO:0007883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cleavage-dependent termination of transcription by RNA polymerase II is abnormal. In cleavage-dependent termination, co-transcriptional secondary structure-dependent endonucleolytic cleavage triggers RNA polymerase II transcription termination; transcripts are not polyadenylated, and are subsequently rapidly degraded in the nucleus. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PMID:34352089","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased termination of RNA polymerase II transcription","termid":"FYPO:0006613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"decreased cleavage-dependent termination of RNA polymerase II transcription","synonyms":[{"name":"decreased Pac1-dependent termination of RNA polymerase II transcription","type":"related"},{"name":"decreased cleavage-dependent RNA polymerase II transcription termination","type":"exact"},{"name":"decreased cleavage-dependent premature transcription termination","type":"narrow"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007883"}


id: GO:1903425
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96975,109911],"is_not":false,"summary":null,"term":"GO:1903425"}]},"cv_name":"molecular_function","definition":"Enables the transfer of fluoride from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","PMID:24173035","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"fluoride transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903425","terms_by_termid":{"GO:1903425":null}}


id: GO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a subpopulation of granulosa cells surrounding the oocyte acquires the specialized features of an ovarian cumulus cell.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cumulus cell differentiation","synonyms":[{"name":"ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0001549"}


id: PBO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X9-C motif containing 2","termid":"PBO:0043395"}


id: PBO:0003257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin Aly1 related, implicated in endocytosis","termid":"PBO:0003257"}


id: FYPO:0002479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and has a larger volume, and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable swollen elongated vegetative cell","synonyms":[{"name":"viable elongated cell with increased cell volume","type":"exact"},{"name":"viable enlarged elongated cell","type":"related"},{"name":"viable large elongated cell","type":"related"},{"name":"viable swollen elongated cell during vegetative growth","type":"exact"},{"name":"viable swollen elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002479"}


id: PR:O74942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidylprolyl isomerase domain and WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04259","PANTHER:PTHR11071:SF40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.04","secondary_identifiers":["UniProtKB:O74942"],"synonyms":[{"name":"PPIase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPWD1","type":"exact"},{"name":"cyclophilin 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74942"}


id: SO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome where regulatory events occur, including epigenetic modifications. These epigenetic modifications can include nucleosome modifications and post-replicational DNA modifications.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin_regulatory_region","synonyms":[{"name":"chromatin regulatory region","type":"exact"}],"termid":"SO:0002306"}


id: PBO:0031897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly protein Nfu1 (predicted)","termid":"PBO:0031897"}


id: PBO:0069380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 640, pseudogene","termid":"PBO:0069380"}


id: PBO:0054724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2133","termid":"PBO:0054724"}


id: PBO:0068267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 3","termid":"PBO:0068267"}


id: FYPO:0003714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:25009287","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003714"}


id: GO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.","definition_xrefs":["ISBN:0878932453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenesis","secondary_identifiers":["Wikipedia:Angiogenesis"],"synonyms":[{"name":"blood vessel formation from pre-existing blood vessels","type":"exact"}],"termid":"GO:0001525"}


id: PBO:0029378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_G0","termid":"PBO:0029378"}


id: PBO:0012237
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterododecameric","termid":"PBO:0012237"}


id: PBO:0084262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein that stimulates Sar1p GTPase activity; involved in COPII vesicle budding through disassociation of coat proteins from membranes onto liposomes; binds Sec16p; SED4 has a paralog, SEC12, that arose from the whole genome duplication","termid":"PBO:0084262"}


id: FYPO:0000598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of vacuolar transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased vacuolar transport","synonyms":[{"name":"decreased vacuolar protein transport","type":"narrow"},{"name":"decreased vacuolar transport during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar transport during vegetative growth","type":"exact"},{"name":"reduced vacuolar transport","type":"exact"},{"name":"vacuolar transport: decreased","type":"related"}],"termid":"FYPO:0000598"}


id: PBO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily W member 1","termid":"PBO:0044419"}


id: GO:0061978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mandibular joint condyle articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20679519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporomandibular joint articular cartilage development","termid":"GO:0061976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mandibular condyle articular cartilage development","termid":"GO:0061978"}


id: PBO:0057500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 618","termid":"PBO:0057500"}


id: FYPO:0000328
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115394,115390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115476],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects protein metabolism in the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein metabolic process during vegetative growth","references_by_uniquename":{"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_01787","SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck1delta","pck2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","gms1delta"],"synonyms":[{"name":"abnormal cellular protein metabolic process during vegetative growth","type":"exact"},{"name":"abnormal protein metabolic process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000328","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0050238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + acceptor = isopyridoxal + reduced acceptor.","definition_xrefs":["MetaCyc:PYRIDOXINE-5-DEHYDROGENASE-RXN","EC:1.1.99.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyridoxine 5-dehydrogenase activity","secondary_identifiers":["RHEA:14497"],"synonyms":[{"name":"pyridoxal-5-dehydrogenase activity","type":"related"},{"name":"pyridoxin 5-dehydrogenase activity","type":"related"},{"name":"pyridoxine 5'-dehydrogenase activity","type":"related"},{"name":"pyridoxine:(acceptor) 5-oxidoreductase activity","type":"related"},{"name":"pyridoxine:acceptor 5-oxidoreductase activity","type":"related"},{"name":"pyridoxol 5-dehydrogenase activity","type":"related"}],"termid":"GO:0050238"}


id: GO:0010497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via plasmodesmata. Plasmodesmata is a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:17601829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"plasmodesmata-mediated intercellular transport","secondary_identifiers":["GO:1902587"],"synonyms":[{"name":"plasmodesma-mediated cell-to-cell transport","type":"exact"},{"name":"plasmodesma-mediated intercellular transport","type":"exact"},{"name":"plasmodesmata-mediated cell-to-cell transport","type":"exact"},{"name":"single organism plasmodesmata-mediated intercellular transport","type":"related"},{"name":"single-organism plasmodesmata-mediated intercellular transport","type":"related"}],"termid":"GO:0010497"}


id: PBO:0046457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS15 antisense RNA 1","termid":"PBO:0046457"}


id: GO:0018935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilotriacetate metabolic process","termid":"GO:0018934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aerobic nitrilotriacetate metabolic process","synonyms":[{"name":"aerobic nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018935"}


id: PBO:0082056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease","termid":"PBO:0082056"}


id: PBO:0048625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 1","termid":"PBO:0048625"}


id: PR:O59782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anion exchange transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C320.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.05","secondary_identifiers":["UniProtKB:O59782"],"synonyms":[{"name":"Spom972h-SLC26A7","type":"exact"}],"termid":"PR:O59782"}


id: PBO:0039603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member C","termid":"PBO:0039603"}


id: GO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cholecystokinin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity. Cholecystokinin can act as a neuropeptide or as a gastrointestinal hormone.","definition_xrefs":["GOC:signaling","PMID:9835394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cholecystokinin receptor activity","synonyms":[{"name":"CCK receptor activity","type":"exact"}],"termid":"GO:0004951"}


id: GO:1905530
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84317],"is_not":false,"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of uracil import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26536126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of uracil import across plasma membrane","termid":"GO:1905529"},{"relation_name":"negatively_regulates","term_name":"uracil import across plasma membrane","termid":"GO:0098721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905530","terms_by_termid":{"GO:1905530":null}}


id: GO:0031499
data:
  {"annotated_genes":["SJAG_16455","SJAG_01176","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84596,95765,109428],"is_not":false,"summary":null,"term":"GO:0031499"}]},"cv_name":"cellular_component","definition":"A multiprotein complex having distributive polyadenylation activity of a variety of RNA substrates including hypomodified and incorrectly folded tRNAs, pre-snRNAs, pre-snoRNAs, incorrectly spliced or processed pre-mRNAs, cryptic unstable transcripts (CUTs), pre-rRNAs and rRNA fragments released as part of rRNA processing. In S. cerevisiae, the complex consists of either Pap2 (also known as Trf4) or Trf5, Air1 or Air2, and Mtr4, and is involved in RNA 3'-end processing and in RNA surveillance and quality control.","definition_xrefs":["PMID:15935758","PMID:16373491","PMID:17410208","PMID:16374505","PMID:16431988","PMID:15173578","PMID:15828860","PMID:15935759","PMID:17652137","PMID:16973437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"TRAMP complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:TRAMP_complex"],"synonyms":[{"name":"TRAMP4 complex","type":"narrow"},{"name":"TRAMP5 complex","type":"narrow"},{"name":"Trf4 complex","type":"narrow"},{"name":"Trf4 poly(A) polymerase complex","type":"narrow"},{"name":"Trf4p-Air2p-Mtr4p polyadenylation complex","type":"narrow"}],"termid":"GO:0031499","terms_by_termid":{"GO:0031499":null}}


id: GO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell differentiation","termid":"GO:0061223"}


id: GO:0052740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-lysophosphatidylserine + H2O = sn-glycerol-phosphoserine + a carboxylate.","definition_xrefs":["EC:3.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"1-acyl-2-lysophosphatidylserine acylhydrolase activity","synonyms":[{"name":"phosphatidylserine-specific phospholipase A1 activity","type":"broad"}],"termid":"GO:0052740"}


id: PBO:0039462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD11 pseudogene 2","termid":"PBO:0039462"}


id: FYECO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which urea was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ urea","synonyms":[{"name":"urea added","type":"exact"}],"termid":"FYECO:0000317"}


id: PBO:0077466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185B","termid":"PBO:0077466"}


id: GO:2000733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000733"}


id: PBO:0054631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2036","termid":"PBO:0054631"}


id: PBO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis, specifically","termid":"PBO:0004909"}


id: GO:0140594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of xyloglucan-specific endo-beta-1,4-glucanase.","definition_xrefs":["PMID:28082413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0004857","GO:0003674","GO:0098772","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase inhibitor activity","termid":"GO:0140594"}


id: GO:0047233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-beta-D-galactosaminyl-1,4-(N-acetyl-alpha-neuraminyl-2,3)-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.165-RXN","EC:2.4.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acetylneuraminylgalactosylglucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:13569"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminyl(alpha2->3)galactosyl(beta1->4)glucosyl beta1->4-acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047233"}


id: PBO:0017780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine transmembrane transporter (predicted)","termid":"PBO:0017780"}


id: GO:0045944
data:
  {"annotated_genes":["SJAG_00163","SJAG_00909","SJAG_04388","SJAG_01778","SJAG_03241","SJAG_02494","SJAG_05341","SJAG_00297","SJAG_04099","SJAG_02849","SJAG_04820","SJAG_03421","SJAG_04421","SJAG_04191","SJAG_03289","SJAG_06599","SJAG_01916","SJAG_04712","SJAG_03501","SJAG_01151","SJAG_00641","SJAG_02391","SJAG_02311","SJAG_00342","SJAG_03879","SJAG_00802","SJAG_02326","SJAG_05288","SJAG_01149","SJAG_04813","SJAG_00693","SJAG_03346","SJAG_00973","SJAG_04611","SJAG_00987","SJAG_06576","SJAG_01199","SJAG_01694","SJAG_03484","SJAG_04839","SJAG_00766","SJAG_02956","SJAG_03735","SJAG_04206","SJAG_01150","SJAG_03183","SJAG_02938","SJAG_02671","SJAG_01952","SJAG_00904","SJAG_01583","SJAG_02057","SJAG_03622","SJAG_02196","SJAG_00150","SJAG_01062","SJAG_03519","SJAG_00269","SJAG_02218","SJAG_03538","SJAG_00164","SJAG_00266","SJAG_01441","SJAG_04551","SJAG_02810","SJAG_03061","SJAG_04755","SJAG_03981","SJAG_05203","SJAG_02252","SJAG_03967","SJAG_05153","SJAG_01740","SJAG_02474","SJAG_00698","SJAG_02255","SJAG_00156","SJAG_03067","SJAG_01805","SJAG_04009","SJAG_02730","SJAG_04249","SJAG_02723","SJAG_02138","SJAG_04092","SJAG_00613","SJAG_02415","SJAG_02773","SJAG_01243","SJAG_04749","SJAG_03118","SJAG_03573","SJAG_05313","SJAG_00210","SJAG_04647","SJAG_01771","SJAG_05343","SJAG_02406","SJAG_06638","SJAG_03590","SJAG_04705","SJAG_02551","SJAG_01403","SJAG_05247","SJAG_04036","SJAG_01205","SJAG_03143","SJAG_01113","SJAG_01307","SJAG_02472","SJAG_04855","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60790,61445,62304,62504,64516,65546,67760,67887,68579,70003,75382,83643,83819,84255,84384,84442,85246,86297,87587,88930,89467,89892,89989,90511,90547,90912,91256,91708,91872,91982,92453,93473,93691,93692,93693,93694,93695,94595,94746,95453,95654,96636,96647,98307,98388,98431,98853,99017,99327,100595,100933,101988,102263,103212,103743,104136,104624,104743,104803,104973,105216,105354,105491,105526,105866,106895,107035,107083,107916,108047,108088,108460,109803,109852,110245,110735,110984,111158,112225,112428,112620,113129,113136,113498,113610,114175,114334,115188,115189],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[102814,89673,84186,85665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[111337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[91983,99217,102195,105204,111445,113137,101517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[86568,90512,90622,104917,102196,110879,91558,102389,92039,101843,98115,105205,83681,86877,102521,104890,115035,111446,85910,95187,99577,99840,94843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any 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regulation of transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0045817","GO:0010552"],"synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0045944","terms_by_termid":{"GO:0032968":null,"GO:0045899":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null}}


id: PBO:0077707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNNI3 interacting kinase","termid":"PBO:0077707"}


id: GO:0034551
data:
  {"annotated_genes":["SJAG_05305","SJAG_01141","SJAG_04560","SJAG_01405","SJAG_03099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95167,103761,104795,109017,113183],"is_not":false,"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the cytochrome bc(1) complex (also known as ubiquinol-cytochrome c reductase), in the mitochondrial inner membrane.","definition_xrefs":["GOC:dgf","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex III assembly","termid":"GO:0017062"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01141":null,"SJAG_01405":null,"SJAG_03099":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0007005","GO:0044085"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial cytochrome bc(1) complex assembly","type":"exact"}],"termid":"GO:0034551","terms_by_termid":{"GO:0034551":null}}


id: PBO:0079626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 N pseudogene 1","termid":"PBO:0079626"}


id: GO:0014042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"positively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron maturation","synonyms":[{"name":"activation of neuron maturation","type":"narrow"},{"name":"stimulation of neuron maturation","type":"narrow"},{"name":"up regulation of neuron maturation","type":"exact"},{"name":"up-regulation of neuron maturation","type":"exact"},{"name":"upregulation of neuron maturation","type":"exact"}],"termid":"GO:0014042"}


id: GO:0036173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thiosulfate, a sulfur oxide that has formula O3S2.","definition_xrefs":["GOC:db","PMID:2188959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thiosulfate binding","termid":"GO:0036173"}


id: PBO:0043554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 3 chain","termid":"PBO:0043554"}


id: GO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 putrescine = NH3 + sym-homospermidine.","definition_xrefs":["EC:2.5.1.44","MetaCyc:2.5.1.44-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homospermidine synthase activity","secondary_identifiers":["RHEA:18645"],"synonyms":[{"name":"putrescine:putrescine 4-aminobutyltransferase (ammonia-forming)","type":"related"}],"termid":"GO:0047296"}


id: FYPO:0004332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation begins later than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"delayed onset of protein degradation during mitosis","synonyms":[{"name":"delayed onset of protein breakdown during mitosis","type":"exact"},{"name":"delayed onset of protein catabolic process during mitosis","type":"exact"},{"name":"delayed onset of protein catabolism during mitosis","type":"exact"},{"name":"delayed onset of protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"delayed onset of protein degradation during mitotic M phase","type":"related"},{"name":"delayed onset of protein degradation during mitotic nuclear division","type":"exact"},{"name":"delayed protein degradation during mitosis","type":"exact"}],"termid":"FYPO:0004332"}


id: PBO:0058241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4528","termid":"PBO:0058241"}


id: PBO:0038537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12B","termid":"PBO:0038537"}


id: PR:Q9P3E6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C750.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.05c","synonyms":[{"name":"Spom972h-SPAC750.05c","type":"exact"}],"termid":"PR:Q9P3E6"}


id: GO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress involved in replicative cell aging (obsolete GO:0001322)","synonyms":[{"name":"age-dependent response to oxidative stress during replicative cell ageing","type":"related"},{"name":"age-dependent response to oxidative stress during replicative cell aging","type":"related"}],"termid":"GO:0001322"}


id: PBO:0091434
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli alkA/tag double mutant","termid":"PBO:0091434"}


id: PBO:0018202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane zinc transmembrane transporter (predicted)","termid":"PBO:0018202"}


id: PBO:0066312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 6","termid":"PBO:0066312"}


id: null:chado_properties:version
data:
  {"annotation_feature_type":"gene","cv_name":"chado_properties","definition":"Chado schema version","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"version","termid":"null:chado_properties:version"}


id: GO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutaryl group (CO-CH2-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["GOC:dph","PMID:24703693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutarylation","termid":"GO:0061698"}


id: PBO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog","termid":"PBO:0000055"}


id: PBO:0067455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 580, pseudogene","termid":"PBO:0067455"}


id: GO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism that results in the killing of its own cells or those of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell killing","synonyms":[{"name":"necrosis","type":"related"}],"termid":"GO:0001906"}


id: PBO:0029236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_disassembly","termid":"PBO:0029236"}


id: PBO:0084851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; localizes to vacuole in response to H2O2","termid":"PBO:0084851"}


id: PBO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIL3 like basic leucine zipper","termid":"PBO:0060951"}


id: PBO:0026915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-stranded_DNA_binding","termid":"PBO:0026915"}


id: PBO:0077279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 18","termid":"PBO:0077279"}


id: PBO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 130","termid":"PBO:0075080"}


id: FYECO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that includes heat shock, i.e. a step in which cells or samples are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping heat shock","termid":"FYECO:0000116"}


id: PBO:0079305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2B","termid":"PBO:0079305"}


id: GO:0052098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by an organism of a cellular component or anatomical structure for the purpose of obtaining nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"part_of","term_name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation by host of specialized structure for nutrient acquisition from symbiont","termid":"GO:0052098"}


id: GO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:9185563","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin production","termid":"GO:0002377"},{"relation_name":"part_of","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"immunoglobulin production involved in immunoglobulin-mediated immune response","secondary_identifiers":["GO:0002379","GO:0002380"],"synonyms":[{"name":"antibody production during immune response","type":"related"},{"name":"antibody secretion during immune response","type":"related"},{"name":"immunoglobulin biosynthetic process involved in immune response","type":"narrow"},{"name":"immunoglobulin production during immune response","type":"related"},{"name":"immunoglobulin production involved in immune response","type":"related"},{"name":"immunoglobulin production involved in immunoglobulin mediated immune response","type":"exact"},{"name":"immunoglobulin secretion involved in immune response","type":"narrow"}],"termid":"GO:0002381"}


id: PBO:0027584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ferrozine","termid":"PBO:0027584"}


id: GO:1901478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of amitrole from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"aminotriazole transmembrane transporter activity","secondary_identifiers":["GO:0015241"],"synonyms":[{"name":"aminotriazole transporter activity","type":"broad"}],"termid":"GO:1901478"}


id: PBO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 2","termid":"PBO:0072104"}


id: GO:0042387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemocyte precursor cell acquires the characteristics of the phagocytic blood-cell type, the plasmatocyte. Plasmatocytes are a class of arthropod hemocytes important in the cellular defense response.","definition_xrefs":["PMID:8174791","PMID:11921077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmatocyte differentiation","termid":"GO:0042387"}


id: GO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that regulates transcription such that the target genes are transcribed as part of the S phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in S phase of mitotic cell cycle (obsolete GO:0000115)","synonyms":[{"name":"S-phase-specific transcription in mitotic cell cycle","type":"related"},{"name":"S-specific transcription in mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during S-phase of mitotic cell cycle","type":"related"},{"name":"regulation of transcription involved in S phase of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription involved in S-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000115"}


id: PATO:0000878
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000878 relative respiratory rate value (obsolete PATO:0000878)","termid":"PATO:0000878"}


id: GO:0047103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestan-26-al = NADH + 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate.","definition_xrefs":["PMID:8496170","RHEA:34627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-alpha,7-alpha,12-alpha-trihydroxycholestan-26-al 26-oxidoreductase activity","secondary_identifiers":["MetaCyc:1.2.1.40-RXN","EC:1.14.15.15"],"synonyms":[{"name":"3-alpha,7-alpha,12-alpha-trihydroxycholestan-26-al 26-dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-al dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-al:NAD+ 26-oxidoreductase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxycholestan-26-al 26-dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxycholestan-26-al 26-oxidoreductase activity","type":"exact"},{"name":"THAL-NAD oxidoreductase activity","type":"exact"},{"name":"cholestanetriol-26-al 26-dehydrogenase activity","type":"related"},{"name":"trihydroxydeoxycoprostanal dehydrogenase activity","type":"exact"}],"termid":"GO:0047103"}


id: PBO:0046967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member D","termid":"PBO:0046967"}


id: GO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of UTP:glucose-1-phosphate uridylyltransferase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase regulator activity","synonyms":[{"name":"UDP-glucose diphosphorylase regulator activity","type":"exact"},{"name":"UDP-glucose pyrophosphorylase regulator activity","type":"exact"},{"name":"glucose-1-phosphate uridylyltransferase regulator activity","type":"exact"}],"termid":"GO:0043763"}


id: PBO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_high_osmolarity","termid":"PBO:0031349"}


id: GO:2001190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"positively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"positive regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001190"}


id: PBO:0003135
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.3.2.1","termid":"PBO:0003135"}


id: GO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"recombination nodule","termid":"GO:0005713"}


id: PBO:0075512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 3","termid":"PBO:0075512"}


id: PBO:0050666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 4","termid":"PBO:0050666"}


id: PBO:0090126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator","termid":"PBO:0090126"}


id: GO:0071743
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgE immunoglobulin complex","termid":"GO:0071742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"IgE immunoglobulin complex, circulating","synonyms":[{"name":"IgE antibody","type":"exact"}],"termid":"GO:0071743"}


id: PBO:0031468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031468"}


id: PBO:0051011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 1 receptor","termid":"PBO:0051011"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: GO:0009498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type ferredoxin (obsolete GO:0009498)","synonyms":[{"name":"bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009498"}


id: PBO:0109618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144A N-terminal like (pseudogene)","termid":"PBO:0109618"}


id: GO:0031109
data:
  {"annotated_genes":["SJAG_07018","SJAG_02624","SJAG_01215","SJAG_04841","SJAG_02737","SJAG_02886","SJAG_01756","SJAG_04312","SJAG_01224","SJAG_02609","SJAG_00723","SJAG_02336","SJAG_02045","SJAG_00856","SJAG_01297","SJAG_02761","SJAG_03540","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[113083],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[114253,85823,100055,94790,104422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[106753,105787,105019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[97139,102598,96538,96233,113317,113088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[97140,114773],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[114254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[100063,104430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[98006],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[87566],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031110"}]},"cv_name":"biological_process","definition":"Assembly or disassembly of microtubules by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00723":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01756":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule dynamics","type":"exact"}],"termid":"GO:0031109","terms_by_termid":{"GO:0007019":null,"GO:0007020":null,"GO:0030954":null,"GO:0031110":null,"GO:0031117":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null,"GO:0060172":null,"GO:0070462":null}}


id: PBO:0041399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C6orf47 antisense RNA 1","termid":"PBO:0041399"}


id: PBO:0005435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Sti1 (predicted)","termid":"PBO:0005435"}


id: PBO:0071021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 23","termid":"PBO:0071021"}


id: PBO:0056209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B4","termid":"PBO:0056209"}


id: GO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by formation of an ester or amide with decanoic acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein decanoylation","synonyms":[{"name":"protein amino acid decanoylation","type":"exact"}],"termid":"GO:0051366"}


id: PBO:0065477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 14","termid":"PBO:0065477"}


id: GO:0097572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.","definition_xrefs":["ISBN:0-444-81258-X","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"right nucleus","termid":"GO:0097572"}


id: GO:1904997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:22267480","GO_REF:0000058","GOC:BHF_miRNA","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"}


id: PBO:0011171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0011171"}


id: GO:0010899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of phosphatidylcholine catabolism. Phosphatidylcholine catabolic processes are the chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"regulates","term_name":"phosphatidylcholine catabolic process","termid":"GO:0034638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylcholine catabolic process","termid":"GO:0010899"}


id: PBO:0054939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2353","termid":"PBO:0054939"}


id: PBO:0045145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 2","termid":"PBO:0045145"}


id: GO:0009615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to virus","synonyms":[{"name":"response to viruses","type":"exact"}],"termid":"GO:0009615"}


id: PBO:0085028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoylated calcium-binding protein; may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; human NCS1 functionally complements the heat sensitivity of a frq1 ts mutant","termid":"PBO:0085028"}


id: GO:0039705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continuation of translation of a viral mRNA beyond a stop codon by the use of a special tRNA that recognizes the UAG and UGA codons as modified amino acids, rather than as termination codons.","definition_xrefs":["GOC:ch","VZ:859","GOC:bf","GOC:jl","PMID:10839817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational readthrough","termid":"GO:0006451"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"viral translational readthrough","synonyms":[{"name":"viral RNA suppression of termination","type":"related"},{"name":"viral stop codon readthrough","type":"exact"}],"termid":"GO:0039705"}


id: PBO:0054822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2235","termid":"PBO:0054822"}


id: PBO:0013113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ortholog of G4-Associated protein","termid":"PBO:0013113"}


id: GO:0007571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as the cell progresses toward the end of its lifespan and cause changes cellular metabolism, resulting in a decline in cell function; for example, one aspect of general metabolic decline is a decrease in the efficiency of protein synthesis.","definition_xrefs":["PMID:9891807","GOC:jh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent general metabolic decline (obsolete GO:0007571)","synonyms":[{"name":"age-dependent decreased translational activity","type":"narrow"},{"name":"age-dependent increased protein content","type":"narrow"},{"name":"age-dependent yeast cell size increase","type":"related"},{"name":"nucleolar size increase","type":"narrow"}],"termid":"GO:0007571"}


id: GO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lutropin-choriogonadotropic hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"lutropin-choriogonadotropic hormone receptor binding","synonyms":[{"name":"lutropin-choriogonadotropic hormone receptor ligand","type":"narrow"}],"termid":"GO:0031775"}


id: GO:0008783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + H2O = putrescine + urea.","definition_xrefs":["RHEA:13929","EC:3.5.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"agmatinase activity","secondary_identifiers":["KEGG_REACTION:R01157","MetaCyc:AGMATIN-RXN","Reactome:R-HSA-350604"],"synonyms":[{"name":"SpeB","type":"related"},{"name":"agmatine amidinohydrolase","type":"broad"},{"name":"agmatine ureohydrolase activity","type":"related"}],"termid":"GO:0008783"}


id: PBO:0003829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein Pab2","termid":"PBO:0003829"}


id: PBO:0062450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 117 pseudogene","termid":"PBO:0062450"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["PMID:11420311","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: GO:2000130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of octopamine or tyramine signaling pathway","termid":"GO:2000127"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway","synonyms":[{"name":"positive regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000130"}


id: PBO:0090287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo repeat protein, human ATXN10 ortholog","termid":"PBO:0090287"}


id: PBO:0048552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GFOD1 antisense RNA 1","termid":"PBO:0048552"}


id: PBO:0029797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_distribution","termid":"PBO:0029797"}


id: PBO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyocyte maturation associated lncRNA","termid":"PBO:0043915"}


id: PBO:0050428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K","termid":"PBO:0050428"}


id: PBO:0071312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 35","termid":"PBO:0071312"}


id: FYPO:0004796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic nuclear divisions are normal (i.e. indistinguishable from wild type) during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:22558440","PMID:25891897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal azygotic meiosis","synonyms":[{"name":"normal azygotic meiotic nuclear division","type":"exact"},{"name":"normal meiosis during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004796"}


id: GO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex","termid":"GO:0031026"}


