# terms

id: PBO:0053286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and calponin homology domains 1","termid":"PBO:0053286"}


id: PBO:0029988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation","termid":"PBO:0029988"}


id: PBO:0043840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 2 pseudogene 1","termid":"PBO:0043840"}


id: GO:0141061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cell of another organism, leading to damage or temporary subversion of that cell.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cell in another organism","termid":"GO:0141061"}


id: PBO:0082714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the nonsense-mediated mRNA decay (NMD) pathway; along with Nam7p and Nmd2p; involved in decay of mRNA containing nonsense codons; involved in telomere maintenance","termid":"PBO:0082714"}


id: SO:0000521
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene and one VDJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VDJ_cluster","synonyms":[{"name":"V VDJ cluster","type":"exact"},{"name":"V-(VDJ)-CLUSTER","type":"exact"}],"termid":"SO:0000521"}


id: PBO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 9","termid":"PBO:0004974"}


id: GO:0044362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the function of proteins in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"modulation of molecular function in another organism","termid":"GO:0044359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of molecular function in another organism","synonyms":[{"name":"negative regulation of molecular function in other organism","type":"exact"}],"termid":"GO:0044362"}


id: GO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 5,6,7,8-tetrahydropteridine = NADPH + H+ + 6,7-dihydropteridine.","definition_xrefs":["EC:1.5.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6,7-dihydropteridine reductase activity","secondary_identifiers":["Reactome:R-HSA-71130","MetaCyc:1.5.1.34-RXN"],"synonyms":[{"name":"5,6,7,8-tetrahydropteridine:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"5,6,7,8-tetrahydropteridine:NAD(P)H+ oxidoreductase activity","type":"related"},{"name":"6,7-dihydropteridine:NAD(P)H oxidoreductase activity","type":"related"},{"name":"DHPR activity","type":"related"},{"name":"NAD(P)H(2):6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NAD(P)H2:6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NADH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-specific dihydropteridine reductase activity","type":"related"},{"name":"dihydropteridine (reduced nicotinamide adenine dinucleotide) reductase activity","type":"related"},{"name":"dihydropteridine reductase (NADH) activity","type":"related"},{"name":"dihydropteridine reductase activity","type":"exact"},{"name":"dihydropteridine reduction","type":"related"}],"termid":"GO:0004155"}


id: PBO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51D-like protein 1","termid":"PBO:0001281"}


id: PBO:0087532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nucleotide Excision Repair Factor 1 (NEF1); recognizes and binds damaged DNA during nucleotide excision repair (NER); also involved in regulation of transcription; contains zinc finger motif; homolog of human XPA protein","termid":"PBO:0087532"}


id: GO:0086050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the bundle of His cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"bundle of His cell action potential","termid":"GO:0086043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during bundle of His cell action potential","synonyms":[{"name":"membrane repolarization during bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086050"}


id: PBO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occupancy","termid":"PBO:0015652"}


id: SO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A major type of spliceosomal intron spliced by the U2 spliceosome, that includes U1, U2, U4/U6 and U5 snRNAs.","definition_xrefs":["PMID:9428511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2_intron","synonyms":[{"name":"U2 intron","type":"exact"}],"termid":"SO:0000184"}


id: PBO:0028342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array_morphology","termid":"PBO:0028342"}


id: GO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of podosome assembly.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of podosome assembly","termid":"GO:0071801"}


id: PBO:0078565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49D2","termid":"PBO:0078565"}


id: GO:0098713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of leucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine import across plasma membrane (obsolete GO:0098713)","synonyms":[{"name":"L-leucine import into cell","type":"narrow"},{"name":"leucine import into cell","type":"exact"}],"termid":"GO:0098713"}


id: PR:O59745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose 6-phosphate receptor-like protein C530.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.09c","synonyms":[{"name":"Spom972h-mrl1","type":"exact"}],"termid":"PR:O59745"}


id: GO:0033705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-6-deoxy-D-mannose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-mannose + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose reductase activity","secondary_identifiers":["MetaCyc:GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose reductase activity","type":"broad"},{"name":"GDP-6-deoxy-D-lyxo-4-hexulose reductase activity","type":"related"},{"name":"GDP-6-deoxy-D-mannose:NAD(P)+ 4-oxidoreductase (D-rhamnose-forming) activity","type":"related"},{"name":"Rmd","type":"related"}],"termid":"GO:0033705"}


id: GO:0050451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 CoA + NADP+ = CoA-disulfide + NADPH + H+.","definition_xrefs":["RHEA:14705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0015036"}],"interesting_parent_ids":["GO:0015036","GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CoA-disulfide reductase (NADPH) activity","secondary_identifiers":["EC:1.8.1.14","MetaCyc:COA-DISULFIDE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"CoA-disulfide reductase (NADH) activity","type":"related"},{"name":"CoA-disulfide reductase (NADP) activity","type":"exact"},{"name":"CoA-disulfide reductase activity","type":"broad"},{"name":"CoA-disulphide reductase activity","type":"broad"},{"name":"CoADR activity","type":"related"},{"name":"NADH:CoA-disulfide oxidoreductase activity","type":"related"},{"name":"coenzyme A disulfide reductase activity","type":"related"}],"termid":"GO:0050451"}


id: GO:1905161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a phagocytic vesicle.","definition_xrefs":["PMID:23303671","GO_REF:0000087","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to phagocytic vesicle","synonyms":[{"name":"protein localisation in phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagosome","type":"exact"},{"name":"protein localization in phagocytic vesicle","type":"exact"},{"name":"protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905161"}


id: PBO:0068562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 13, pseudogene","termid":"PBO:0068562"}


id: PBO:0074330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCA5 antisense RNA 1","termid":"PBO:0074330"}


id: GO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).","definition_xrefs":["PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of opsin-mediated signaling pathway","termid":"GO:0022400"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"negatively_regulates","term_name":"rhodopsin mediated signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of opsin-mediated signaling pathway","synonyms":[{"name":"deactivation of opsin mediated signaling","type":"narrow"},{"name":"deactivation of rhodopsin mediated signalling","type":"narrow"},{"name":"negative regulation of rhodopsin-mediated signaling pathway","type":"narrow"},{"name":"rod response recovery","type":"broad"}],"termid":"GO:0016059"}


id: PBO:0074978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-20","termid":"PBO:0074978"}


id: FYPO:0000735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0000120","FYPO:0005447"],"is_obsolete":false,"name":"short meiotic spindle","synonyms":[{"name":"decreased meiotic spindle length","type":"exact"},{"name":"short meiotic spindles","type":"exact"},{"name":"short spindle during meiosis","type":"exact"}],"termid":"FYPO:0000735"}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:21730158","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: PBO:0028223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_splice_site_specificity","termid":"PBO:0028223"}


id: _global:directly_positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulated_by","secondary_identifiers":["RO:0002024"],"termid":"_global:directly_positively_regulated_by"}


id: SOFP:gbunit
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Name of genbank scaffold sequence intersected by the feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gbunit","termid":"SOFP:gbunit"}


id: PBO:0078209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-2","termid":"PBO:0078209"}


id: GO:1904565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-oleoyl-sn-glycerol 3-phosphate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:12139919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 1-oleoyl-sn-glycerol 3-phosphate","synonyms":[{"name":"response to 1-oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to LPA","type":"exact"},{"name":"response to lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl-L-alpha-lysophosphatidic acid","type":"exact"}],"termid":"GO:1904565"}


id: PBO:0043824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Q","termid":"PBO:0043824"}


id: FYPO:0006678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to chromium ions.","definition_xrefs":["PomBase:mah","PMID:30148840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to chromium","synonyms":[{"name":"increased number of Rad22 foci during cellular response to chromium","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to chromium during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to chromium during vegetative growth","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to chromium ions","type":"exact"}],"termid":"FYPO:0006678"}


id: PBO:0052100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 3","termid":"PBO:0052100"}


id: GO:0048472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-threonine + H+ = (R)-1-aminopropan-2-yl phosphate + CO2.","definition_xrefs":["EC:4.1.1.81","RHEA:11492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"threonine-phosphate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R06530","MetaCyc:4.1.1.81-RXN"],"synonyms":[{"name":"CobD","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase [(R)-1-aminopropan-2-yl-phosphate-forming]","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase activity","type":"related"},{"name":"L-threonine-O-3-phosphate decarboxylase activity","type":"exact"}],"termid":"GO:0048472"}


id: SO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme cleavage site where both strands are cut at the same position.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_cleavage_junction","termid":"SO:0001688"},{"relation_name":"part_of","term_name":"blunt_end_restriction_enzyme_cleavage_site","termid":"SO:0001691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_junction","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001693"}


id: GO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lactoyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["RHEA:34691","EC:4.2.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"lactoyl-CoA dehydratase activity","secondary_identifiers":["MetaCyc:LACTOYL-COA-DEHYDRATASE-RXN","MetaCyc:RXN-781","UM-BBD_reactionID:r0086"],"synonyms":[{"name":"acrylyl coenzyme A hydratase activity","type":"related"},{"name":"lactoyl coenzyme A dehydratase activity","type":"related"},{"name":"lactoyl-CoA hydro-lyase (acryloyl-CoA-forming)","type":"related"},{"name":"lactoyl-CoA hydro-lyase activity","type":"related"},{"name":"lactyl CoA dehydratase activity","type":"related"},{"name":"lactyl-coenzyme A dehydrase activity","type":"related"}],"termid":"GO:0018819"}


id: GO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cellular ketone metabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072365)","synonyms":[{"name":"regulation of cellular ketone metabolic process by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"},{"name":"regulation of cellular ketone metabolism by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072365"}


id: FYPO:0003958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal diacylglycerol O-acyltransferase activity","synonyms":[{"name":"abnormal DGAT activity","type":"exact"},{"name":"abnormal diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003958"}


id: PBO:0039272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase","termid":"PBO:0039272"}


id: PBO:0069228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 483, pseudogene","termid":"PBO:0069228"}


id: GO:0009154
data:
  {"annotated_genes":["SJAG_04870","SJAG_02247","SJAG_04192","SJAG_06622","SJAG_01310","SJAG_02107","SJAG_04495","SJAG_02369","SJAG_03828","SJAG_06621","SJAG_02009","SJAG_03373","SJAG_03852","SJAG_02945","SJAG_00839","SJAG_02481","SJAG_00685","SJAG_00633","SJAG_03903","SJAG_02796","SJAG_04048","SJAG_00027","SJAG_00461","SJAG_04334","SJAG_03660","SJAG_00605","SJAG_02135","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[112533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[101608,105564,105565,100616,105567,101972,99804,112503,105094,101606,105563,105095,105099,94167,105096,105100,105566,105098,99545,105568,90696,91186,101973,94439,101607,105097,105562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[100619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94356,107740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[75077,72033],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleotide breakdown","type":"exact"},{"name":"purine ribonucleotide catabolism","type":"exact"},{"name":"purine ribonucleotide degradation","type":"exact"}],"termid":"GO:0009154","terms_by_termid":{"GO:0006096":null,"GO:0006198":null,"GO:0015938":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901911":null}}


id: GO:1990227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a paranodal junction, a highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. A paranodal junction flanks the node of Ranvier in myelinated nerve, electrically isolates the myelinated from unmyelinated nerve segments, and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["PMID:24011083","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paranodal junction maintenance","synonyms":[{"name":"axoglial septate junction maintenance","type":"exact"},{"name":"paranodal axoglial junction maintenance","type":"exact"},{"name":"paranodal septate maintenance","type":"exact"}],"termid":"GO:1990227"}


id: GO:0000455
data:
  {"annotated_genes":["SJAG_03755","SJAG_03572","SJAG_01172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87388,88453,102380],"is_not":false,"summary":null,"term":"GO:0000455"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01172":null,"SJAG_03572":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"enzyme-directed rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000455","terms_by_termid":{"GO:0000455":null}}


id: MOD:01198
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-heptosyl-L-serine.","definition_xrefs":["Unimod:490#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-heptosyl-L-serine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01198"}


id: PR:Q9UTH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup132 gene.","definition_xrefs":["UniProtKB:Q9UTH0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup132 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.04","synonyms":[{"name":"Spom972h-nup132","type":"exact"},{"name":"nuclear pore protein nup132 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH0"}


id: GO:0090402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oncogene-induced cell senescence","synonyms":[{"name":"OIS","type":"exact"}],"termid":"GO:0090402"}


id: PBO:0088230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldose reductase ARK13 family YakC, implicated in cellular detoxification from family members","termid":"PBO:0088230"}


id: PBO:0089158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7-like Rlp7 involved in ribosome biogenesis","termid":"PBO:0089158"}


id: PBO:0065152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 5","termid":"PBO:0065152"}


id: PR:Q9Y7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.03 gene.","definition_xrefs":["UniProtKB:Q9Y7K5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2A9.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.03","synonyms":[{"name":"Spom972h-SPBC2A9.03","type":"exact"}],"termid":"PR:Q9Y7K5"}


id: GO:0070535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["GOC:mah","PMID:18430235"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked ubiquitination (obsolete GO:0070535)","termid":"GO:0070535"}


id: GO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate + H+.","definition_xrefs":["EC:3.7.1.2","RHEA:10244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"fumarylacetoacetase activity","secondary_identifiers":["UM-BBD_reactionID:r0107","MetaCyc:FUMARYLACETOACETASE-RXN","KEGG_REACTION:R01364","Reactome:R-HSA-71181"],"synonyms":[{"name":"4-fumarylacetoacetate fumarylhydrolase activity","type":"related"},{"name":"beta-diketonase activity","type":"related"},{"name":"fumarylacetoacetate hydrolase activity","type":"related"}],"termid":"GO:0004334"}


id: PBO:0044858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 1","termid":"PBO:0044858"}


id: GO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the 4,5-ring opening reaction: 3,4-dihydroxyphenylalanine + O2 = 4,5-seco-DOPA. 4,5-seco-DOPA spontaneously recyclizes to form betalamic acid.","definition_xrefs":["PMID:11711071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"DOPA dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-8460"],"synonyms":[{"name":"dihydroxyphenylalanine dioxygenase activity","type":"exact"}],"termid":"GO:0046566"}


id: PBO:0036544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase Met1","termid":"PBO:0036544"}


id: FYPO:0001118
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115523,115406,115418],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115628],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"},{"annotations":[115294,115293,115297,115427],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0000648"},{"annotations":[115236,115231,115268,115242],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115296,115302,115295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[115300,115301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"abnormal vegetative cell morphology","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02013","SJAG_00514","SJAG_01794","SJAG_02819","SJAG_02592","SJAG_04312","SJAG_04332","SJAG_03581","SJAG_00266","SJAG_03453","SJAG_04522","SJAG_00028","SJAG_04280","SJAG_03048"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta","ras1delta","pyp1delta","atf1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","gef1delta","sty1delta","efc25delta","rga6delta","scd1delta","rga4delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell morphology during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001118","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the retina.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"},{"relation_name":"is_a","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of retina cells","termid":"GO:0048877"}


id: GO:0009512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome f, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.","definition_xrefs":["ISBN:0943088399","PMID:16352458","PMID:16228398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytochrome b6f complex","secondary_identifiers":["Wikipedia:Cytochrome_b6f_complex"],"synonyms":[{"name":"cyt b(6)f complex","type":"exact"},{"name":"cyt b6-f complex","type":"exact"},{"name":"cyt b6/f complex","type":"exact"},{"name":"cyt b6f complex","type":"exact"},{"name":"cytochrome b(6)f complex","type":"exact"},{"name":"cytochrome b6-f complex","type":"exact"},{"name":"cytochrome b6/f complex","type":"exact"}],"termid":"GO:0009512"}


id: GO:0070601
data:
  {"annotated_genes":["SJAG_04259","SJAG_00229","SJAG_01805","SJAG_03989","SJAG_00600","SJAG_01082","SJAG_01601","SJAG_03681","SJAG_04699","SJAG_03926","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95287,103987,109952,110654,97952,97428,112050,89978,109396,100650],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[69551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051754"},{"annotations":[95289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the centromeric region of the chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromeric sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sister chromatid cohesion at centromere","type":"exact"}],"termid":"GO:0070601","terms_by_termid":{"GO:0051754":null,"GO:0071962":null,"GO:1990813":null}}


id: GO:0035721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of large protein complexes along microtubules from the tip of a cilium (also called flagellum) toward the cell body, mediated by motor proteins.","definition_xrefs":["GOC:cilia","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraciliary transport","termid":"GO:0042073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intraciliary retrograde transport","synonyms":[{"name":"intraflagellar retrograde transport","type":"exact"}],"termid":"GO:0035721"}


id: PBO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter (predicted)","termid":"PBO:0000135"}


id: GO:1900876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene metabolic process","synonyms":[{"name":"nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900876"}


id: PBO:0088875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2","termid":"PBO:0088875"}


id: PBO:0051408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-40","termid":"PBO:0051408"}


id: PBO:0080195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 3","termid":"PBO:0080195"}


id: PBO:0052645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 13","termid":"PBO:0052645"}


id: PBO:0087800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; interacts with homolog Frt1p; promotes growth in conditions of high Na+, alkaline pH, or cell wall stress, possibly via a role in posttranslational translocation; potential Cdc28p substrate; FRT2 has a paralog, FRT1, that arose from the whole genome duplication","termid":"PBO:0087800"}


id: FYPO:0000403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of mitotic G2/M phase transition (obsolete FYPO:0000403)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased duration","type":"related"},{"name":"increased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased duration of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000403"}


id: PBO:0069855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1141, pseudogene","termid":"PBO:0069855"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: GO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"negative regulation of development of symbiont during interaction with host","type":"related"},{"name":"negative regulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044147"}


id: PBO:0079085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 2-1","termid":"PBO:0079085"}


id: GO:0140164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Golgi transport complex, a multisubunit tethering complex of the CATCHR family.","definition_xrefs":["GOC:ha","PMID:28100664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Golgi transport complex binding","synonyms":[{"name":"COG complex binding","type":"exact"}],"termid":"GO:0140164"}


id: GO:0005261
data:
  {"annotated_genes":["SJAG_05229","SJAG_MIT37","SJAG_07003","SJAG_00836","SJAG_03925","SJAG_00438","SJAG_00985","SJAG_00542","SJAG_02322","SJAG_03895","SJAG_02877","SJAG_02532","SJAG_01471","SJAG_03114","SJAG_01090","SJAG_04668","SJAG_04122","SJAG_05204","SJAG_00133","SJAG_02019","SJAG_02105","SJAG_02564","SJAG_02598","SJAG_MIT15","SJAG_00915","SJAG_05342","SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88586,95783,110593,91864,88527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[105545,92162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[95784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[99929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[99197,99846,90050,111995,85340,115170,103977,101158,97975,89033,115160,104957,89032,92793,115165,104067,91015,99817,89452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[88587,88528,110094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent passage of monoatomic cations across a lipid bilayer down a concentration gradient.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:def","GOC:pr","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01471":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04668":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4420052","GO:0015281","Reactome:R-HSA-1296043","Reactome:R-HSA-169683","Reactome:R-HSA-9706720","GO:0015338","Reactome:R-HSA-9712190","Reactome:R-HSA-9754616","Reactome:R-HSA-1168376","Reactome:R-HSA-2089943","Reactome:R-HSA-9837835","Reactome:R-HSA-426223"],"synonyms":[{"name":"cation channel activity","type":"broad"},{"name":"cation diffusion facilitator activity","type":"exact"},{"name":"non-selective cation channel activity","type":"narrow"}],"termid":"GO:0005261","terms_by_termid":{"GO:0005227":null,"GO:0005262":null,"GO:0008331":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: PBO:0062695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 6","termid":"PBO:0062695"}


id: PBO:0041964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 7","termid":"PBO:0041964"}


id: GO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"negative chemotaxis","termid":"GO:0050919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of negative chemotaxis","termid":"GO:0050923"}


id: GO:0046196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-nitrophenol metabolic process","termid":"GO:0018960"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"4-nitrophenol catabolic process","synonyms":[{"name":"4-nitrophenol breakdown","type":"exact"},{"name":"4-nitrophenol catabolism","type":"exact"},{"name":"4-nitrophenol degradation","type":"exact"}],"termid":"GO:0046196"}


id: PBO:0083186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene CTS2/YDR371W; identified by expression profiling and mass spectrometry","termid":"PBO:0083186"}


id: PBO:0077946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 6-1","termid":"PBO:0077946"}


id: PBO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh4 (predicted)","termid":"PBO:0009082"}


id: PR:Q9UU90
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P/MRP protein subunit POP5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04981","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP protein subunit POP5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.09c","secondary_identifiers":["UniProtKB:Q9UU90"],"synonyms":[{"name":"Spom972h-POP5","type":"exact"}],"termid":"PR:Q9UU90"}


id: MOD:01547
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01547"}


id: PBO:0065839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 4","termid":"PBO:0065839"}


id: PBO:0067063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 88, pseudogene","termid":"PBO:0067063"}


id: GO:0071888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a macrophage, a mononuclear phagocyte present in a variety of tissues.","definition_xrefs":["GOC:mah","CL:0000235","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory cell apoptotic process","termid":"GO:0006925"},{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage apoptotic process","synonyms":[{"name":"AICD","type":"related"},{"name":"activation-induced cell death","type":"related"},{"name":"macrophage apoptosis","type":"narrow"}],"termid":"GO:0071888"}


id: GO:0035331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hippo signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hippo signaling","termid":"GO:0035330"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"hippo signaling","termid":"GO:0035329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hippo signaling","synonyms":[{"name":"negative regulation of hippo signaling cascade","type":"related"},{"name":"negative regulation of hippo signaling pathway","type":"exact"},{"name":"negative regulation of hippo signalling cascade","type":"related"}],"termid":"GO:0035331"}


id: PBO:0026947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_meiotic_cell_cycle","termid":"PBO:0026947"}


id: GO:0042301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphate ion.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphate ion binding","termid":"GO:0042301"}


id: PBO:0041206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin like","termid":"PBO:0041206"}


id: GO:0017178
data:
  {"annotated_genes":["SJAG_04544"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107327],"is_not":false,"summary":null,"term":"GO:0017178"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + diphthine + NH4 = ADP + diphthamide + H+ + phosphate.","definition_xrefs":["EC:6.3.1.14","RHEA:19753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04544":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"diphthine-ammonia ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5358475","MetaCyc:DIPHTINE--AMMONIA-LIGASE-RXN","KEGG_REACTION:R03613"],"synonyms":[{"name":"diphthamide synthase activity","type":"related"},{"name":"diphthamide synthetase activity","type":"related"},{"name":"diphthine:ammonia ligase (ADP-forming)","type":"related"}],"termid":"GO:0017178","terms_by_termid":{"GO:0017178":null}}


id: PR:O59743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C530.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.07c","synonyms":[{"name":"Spom972h-SPBC530.07c","type":"exact"}],"termid":"PR:O59743"}


id: GO:0006668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate metabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate metabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate metabolism","type":"exact"},{"name":"sphinganine-1-phosphate metabolism","type":"exact"}],"termid":"GO:0006668"}


id: PBO:0059967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 12","termid":"PBO:0059967"}


id: PBO:0086770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; small ORF identified by SAGE; deletion strains are moderately sensitive to the radiomimetic drug bleomycin","termid":"PBO:0086770"}


id: GO:0060809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The epithelial to mesenchymal transition process in which a mesodermal cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell as part of the process of gastrulation.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal to mesenchymal transition involved in gastrulation","termid":"GO:0060809"}


id: GO:0052430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont RNA levels (obsolete GO:0052430)","termid":"GO:0052430"}


id: GO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Association of oocytes with supporting epithelial granulosa cells to form primordial follicles.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle endowment","termid":"GO:0001551"}


id: PBO:0049538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 2, pseudogene","termid":"PBO:0049538"}


id: GO:0060300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the activity of a molecule that controls the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine activity","termid":"GO:0060300"}


id: PBO:0049797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 3","termid":"PBO:0049797"}


id: GO:0072735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tert-butyl hydroperoxide (t-BOOH) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkyl hydroperoxide","termid":"GO:0033195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tert-butyl hydroperoxide","synonyms":[{"name":"response to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"response to t-BOOH","type":"exact"}],"termid":"GO:0072735"}


id: PBO:0064907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 catalytic subunit","termid":"PBO:0064907"}


id: PBO:0084507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific subunit of the t-SNARE complex; required for prospore membrane formation during sporulation; similar to but not functionally redundant with Sec9p; binds to phosphatidic acid; SNAP-25 homolog","termid":"PBO:0084507"}


id: GO:0016972
data:
  {"annotated_genes":["SJAG_00196","SJAG_01647","SJAG_02489","SJAG_02827","SJAG_03992"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94663,107000,110934],"is_not":false,"summary":null,"term":"GO:0016972"},{"annotations":[93312,99353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + 2 H2O2.","definition_xrefs":["RHEA:17357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491","GO:0015036"],"is_obsolete":false,"name":"thiol oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.3.2","MetaCyc:THIOL-OXIDASE-RXN","UM-BBD_reactionID:r1293"],"synonyms":[{"name":"sulfhydryl oxidase activity","type":"related"},{"name":"thiol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016972","terms_by_termid":{"GO:0016971":null,"GO:0016972":null}}


id: GO:0071471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of non-ionic solutes (e.g. mannitol, sorbitol) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to non-ionic osmotic stress","termid":"GO:0010335"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to non-ionic osmotic stress","termid":"GO:0071471"}


id: PBO:0030699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_catalase_activity","termid":"PBO:0030699"}


id: PBO:0046605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 7","termid":"PBO:0046605"}


id: GO:0070049
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 2 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-2 complex","synonyms":[{"name":"SNARE complex (Stx2, Snap25, Vamp8)","type":"narrow"},{"name":"Stx2-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070049"}


id: PBO:0058824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8054","termid":"PBO:0058824"}


id: FYPO:0006315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation does not occur. Homologous chromosome segregation is the process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0045143","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished homologous chromosome segregation","synonyms":[{"name":"abolished chromosome segregation during meiosis I","type":"exact"},{"name":"homologous chromosome segregation abolished","type":"exact"}],"termid":"FYPO:0006315"}


id: PBO:0080097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated embryonic cell transcription factor 1","termid":"PBO:0080097"}


id: PBO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 2","termid":"PBO:0045042"}


id: GO:0008938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nicotinate = N-methylnicotinate + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.7","RHEA:20241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nicotinate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01721","MetaCyc:NICOTINATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:nicotinate N-methyltransferase activity","type":"related"},{"name":"furanocoumarin 8-O-methyltransferase activity","type":"related"}],"termid":"GO:0008938"}


id: PBO:0064279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1","termid":"PBO:0064279"}


id: FYPO:0003495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of azetidine-2-carboxylic acid acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}


id: PBO:0049087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 142","termid":"PBO:0049087"}


id: PBO:0079272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39C pseudogene 1","termid":"PBO:0079272"}


id: PBO:0004845
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.1","termid":"PBO:0004845"}


id: PBO:0076880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 29","termid":"PBO:0076880"}


id: PBO:0003595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Sfi1","termid":"PBO:0003595"}


id: GO:1903373
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63986],"is_not":false,"summary":null,"term":"GO:1903373"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum tubular network organization.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:24891604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum tubular network organization","termid":"GO:1903371"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum tubular network organization","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of ER tubular network organisation","type":"narrow"},{"name":"activation of ER tubular network organization","type":"narrow"},{"name":"activation of endoplasmic reticulum tubular network organisation","type":"narrow"},{"name":"activation of endoplasmic reticulum tubular network organization","type":"narrow"},{"name":"positive regulation of ER tubular network organisation","type":"exact"},{"name":"positive regulation of ER tubular network organization","type":"exact"},{"name":"positive regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up regulation of ER tubular network organisation","type":"exact"},{"name":"up regulation of ER tubular network organization","type":"exact"},{"name":"up regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"up-regulation of ER tubular network organisation","type":"exact"},{"name":"up-regulation of ER tubular network organization","type":"exact"},{"name":"up-regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up-regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"upregulation of ER tubular network organisation","type":"exact"},{"name":"upregulation of ER tubular network organization","type":"exact"},{"name":"upregulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"upregulation of endoplasmic reticulum tubular network organization","type":"exact"}],"termid":"GO:1903373","terms_by_termid":{"GO:1903373":null}}


id: GO:0002706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"}


id: GO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which DNA and associated proteins are formed into a compact, orderly structure within a nucleoid.","definition_xrefs":["GOC:bhm","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoid DNA packaging (obsolete GO:0036385)","termid":"GO:0036385"}


id: GO:1905491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory neuron axon guidance.","definition_xrefs":["PMID:16516839","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of sensory neuron axon guidance","termid":"GO:1905489"},{"relation_name":"positively_regulates","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory neuron axon guidance","synonyms":[{"name":"activation of sensory neuron axon guidance","type":"narrow"},{"name":"up regulation of sensory neuron axon guidance","type":"exact"},{"name":"up-regulation of sensory neuron axon guidance","type":"exact"},{"name":"upregulation of sensory neuron axon guidance","type":"exact"}],"termid":"GO:1905491"}


id: PBO:0070250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 193 pseudogene","termid":"PBO:0070250"}


id: PBO:0046076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 1","termid":"PBO:0046076"}


id: GO:0060682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the primary ureteric bud grows along its axis dorsally toward the metanephric blastema.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ureteric bud growth","termid":"GO:0060682"}


id: PBO:0090070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox16","termid":"PBO:0090070"}


id: GO:0071458
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products that penetrate only the cytoplasmic side of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of cytoplasmic side of endoplasmic reticulum membrane (obsolete GO:0071458)","synonyms":[{"name":"integral to ER membrane, cytosolic side","type":"exact"},{"name":"integral to cytosolic leaflet of endoplasmic reticulum membrane","type":"exact"},{"name":"integral to cytosolic side of ER membrane","type":"exact"},{"name":"integral to cytosolic side of endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0071458"}


id: PBO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-M (predicted)","termid":"PBO:0004328"}


id: PBO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 OG-Fe(II) oxygenase superfamily protein Ofd2","termid":"PBO:0002919"}


id: FYPO:0002709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable spindle pole body.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spindle pole body absent from cell","synonyms":[{"name":"SPB absent from cell","type":"exact"},{"name":"absent spindle pole body","type":"exact"}],"termid":"FYPO:0002709"}


id: PR:P53694
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtn1 gene.","definition_xrefs":["UniProtKB:P53694","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31A8.01c","synonyms":[{"name":"Spom972h-rtn1","type":"exact"},{"name":"cell lysis protein cwl1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P53694"}


id: FYPO:0006944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount on one or more ribosomal proteins measured in a cell is lower than normal.","definition_xrefs":["PMID:30862564","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased ribosomal protein level","synonyms":[{"name":"decreased cellular ribosomal protein level","type":"exact"},{"name":"decreased ribosomal protein level during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal protein level during vegetative growth","type":"exact"},{"name":"reduced ribosomal protein level","type":"exact"}],"termid":"FYPO:0006944"}


id: PBO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033781"}


id: PBO:0071434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 40","termid":"PBO:0071434"}


id: GO:0030420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a naturally transformable bacterium acquires the ability to take up exogenous DNA. This term should be applied only to naturally transformable bacteria, and should not be used in the context of artificially induced bacterial transformation.","definition_xrefs":["ISBN:1555811027","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"part_of","term_name":"DNA-mediated transformation","termid":"GO:0009294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of competence for transformation","termid":"GO:0030420"}


id: GO:0072396
data:
  {"annotated_genes":["SJAG_04140","SJAG_01837","SJAG_01805","SJAG_00082","SJAG_03048","SJAG_04183","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107366,112829,89986,98539,86203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[100315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[98552,90717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072405","GO:0072408"],"synonyms":[{"name":"G1/S transition checkpoint effector process","type":"related"},{"name":"G2/M transition checkpoint effector process","type":"related"},{"name":"cell cycle checkpoint effector process","type":"exact"},{"name":"response to G1/S transition checkpoint signaling","type":"related"},{"name":"response to G2/M transition checkpoint signaling","type":"related"},{"name":"response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:0072396","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: PBO:0067196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 260, pseudogene","termid":"PBO:0067196"}


id: GO:0038160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-X-C chemokine CXCL12 to a C-X-C chemokine type 4 receptor (CXCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-X-C motif) ligand 12 signaling pathway","termid":"GO:0038146"},{"relation_name":"is_a","term_name":"C-X-C chemokine receptor CXCR4 signaling pathway","termid":"GO:0038159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CXCL12-activated CXCR4 signaling pathway","synonyms":[{"name":"CXCL12-activated CXCR4 signalling pathway","type":"exact"}],"termid":"GO:0038160"}


id: GO:0035483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:cy","ISBN:9781416032458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric motility","termid":"GO:0035482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric emptying","termid":"GO:0035483"}


id: GO:0032570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to progesterone","synonyms":[{"name":"response to progesterone stimulus","type":"exact"}],"termid":"GO:0032570"}


id: GO:1901184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERBB signaling pathway","synonyms":[{"name":"regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"regulation of EGFR family signaling pathway","type":"related"},{"name":"regulation of ERBB signalling pathway","type":"exact"},{"name":"regulation of ErbB signaling","type":"exact"}],"termid":"GO:1901184"}


id: PBO:0053476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 446","termid":"PBO:0053476"}


id: GO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-methionine amide by hydrolysis and oxidation of an interior Met-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0093"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-methionine amidation (obsolete GO:0018046)","termid":"GO:0018046"}


id: PBO:0061480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 1","termid":"PBO:0061480"}


id: GO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against microbes mediated by anti-microbial peptides in body fluid.","definition_xrefs":["PMID:24287494","PMID:15761415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antimicrobial humoral immune response mediated by antimicrobial peptide","synonyms":[{"name":"antimicrobial peptide-mediated antimicrobial humoral response","type":"exact"},{"name":"peptide-mediated antimicrobial humoral response","type":"broad"}],"termid":"GO:0061844"}


id: GO:0060075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a resting potential, the electrical charge across the plasma membrane, with the interior of the cell negative with respect to the exterior. The resting potential is the membrane potential of a cell that is not stimulated to be depolarized or hyperpolarized.","definition_xrefs":["GOC:dph","GOC:ef","ISBN:0195088433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of resting membrane potential","synonyms":[{"name":"regulation of resting potential","type":"exact"}],"termid":"GO:0060075"}


id: PBO:0062879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 antisense RNA 1 (head to head)","termid":"PBO:0062879"}


id: PBO:0081867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 805","termid":"PBO:0081867"}


id: PBO:0076206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 16","termid":"PBO:0076206"}


id: GO:0044070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of anions, atoms or small molecules with a net negative charge into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic anion transport","synonyms":[{"name":"regulation of anion transport","type":"broad"}],"termid":"GO:0044070"}


id: PBO:0027024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0027024"}


id: GO:0021667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 6 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:curators","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 6 development","termid":"GO:0021572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}


id: PBO:0017663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family, Sea2 (predicted)","termid":"PBO:0017663"}


id: PBO:0087553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop7p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087553"}


id: GO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-galactosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-galactosamine 4-sulfate.","definition_xrefs":["GOC:ai","EC:2.8.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"N-acetylgalactosamine 4-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2022063","Reactome:R-HSA-3636919","Reactome:R-HSA-6786034"],"synonyms":[{"name":"N-acetylgalactosamine 4-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0001537"}


id: PBO:0067701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 9","termid":"PBO:0067701"}


id: PBO:0040661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 7","termid":"PBO:0040661"}


id: GO:0102209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-trans-permethrin + H2O = H+ + (3-phenoxyphenyl)methanol + (1S,3R)-3-(2,2-dichlorovinyl)-2,2-dimethylcyclopropanecarboxylate.","definition_xrefs":["EC:3.1.1.88","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"trans-permethrin hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12167","RHEA:30283"],"termid":"GO:0102209"}


id: PBO:0057429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-2","termid":"PBO:0057429"}


id: GO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"}


id: GO:0031291
data:
  {"annotated_genes":["SJAG_04464","SJAG_02520"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101209,107179],"is_not":false,"summary":null,"term":"GO:0031291"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Ran subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02520":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Ran protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031291","terms_by_termid":{"GO:0031291":null}}


id: GO:0046896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal leucine of proteins to form the derivative N-methyl-L-leucine.","definition_xrefs":["RESID:AA0337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-leucine modification","termid":"GO:0018204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-leucine methylation","termid":"GO:0046896"}


id: PBO:0074274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen like 1","termid":"PBO:0074274"}


id: FYPO:0005127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from late meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of late meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of late meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of late meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005127"}


id: PBO:0086425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative helicase with limited sequence similarity to human Rb protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YLR419W is not an essential gene","termid":"PBO:0086425"}


id: GO:2000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:2000715"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000717"}


id: PBO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit Dpb3","termid":"PBO:0001504"}


id: GO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an aleurone grain.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"aleurone grain lumen","termid":"GO:0034422"}


id: PBO:0040541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 9","termid":"PBO:0040541"}


id: PBO:0042790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164 pseudogene 1","termid":"PBO:0042790"}


id: GO:0031949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"glucocorticoid catabolic process","termid":"GO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of glucocorticoid catabolic process","termid":"GO:0031949"}


id: PBO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-directed RNA polymerase Rdp1","termid":"PBO:0000908"}


id: GO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in nonribosomal peptide synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"tRNA aminoacylation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"tRNA aminoacylation for nonribosomal peptide anabolism","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide biosynthesis","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide formation","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide synthesis","type":"exact"}],"termid":"GO:0043040"}


id: PBO:0027566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_microtubules_protruding_beyond_spindle_pole_body","termid":"PBO:0027566"}


id: PBO:0012538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_agent","termid":"PBO:0012538"}


id: PATO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's touching another entity.","definition_xrefs":["PATOC:wdahdul"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in contact with","synonyms":[{"name":"contiguous","type":"related"}],"termid":"PATO:0001961"}


id: FYPO:0004666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion along chromosome arms","synonyms":[{"name":"abnormal sister chromatid cohesion along chromosome arms during meiosis","type":"exact"},{"name":"decreased meiotic sister chromatid cohesion, arms","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion along chromosome arms","type":"exact"}],"termid":"FYPO:0004666"}


id: PBO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated Methyltransferase complex subunit","termid":"PBO:0005006"}


id: PBO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2B interactor family member 3","termid":"PBO:0048378"}


id: GO:0099589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting a signal across a membrane by activating some effector activity. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"serotonin receptor activity","termid":"GO:0099589"}


id: PBO:0090725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase","termid":"PBO:0090725"}


id: PBO:0071246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 87","termid":"PBO:0071246"}


id: GO:0018914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorobenzene, a derivative of benzene with a chlorine atoms attached to the ring. It is a colorless liquid that is manufactured for use as a solvent. It quickly evaporates in the air and is degraded by hydroxyl radicals that are produced photochemically. The gas acts as a source of ClOx, which helps in the breakdown of stratospheric ozone.","direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlorobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cb"],"synonyms":[{"name":"chlorobenzene metabolism","type":"exact"}],"termid":"GO:0018914"}


id: PBO:0088385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport","termid":"PBO:0088385"}


id: PBO:0036234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein L-glutamate O-methyltransferase, implicated in DNA damage response (predicted)","termid":"PBO:0036234"}


id: FYPO:0004529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial translation","synonyms":[{"name":"normal mitochondrial protein biosynthesis","type":"exact"},{"name":"normal mitochondrial protein synthesis","type":"exact"},{"name":"normal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004529"}


id: PBO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.-.-","termid":"PBO:0005079"}


id: MOD:01507
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["OMSSA:211","OMSSA:176","Unimod:889#N-term","Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117nterm","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on nterm","type":"exact"}],"termid":"MOD:01507"}


id: PBO:0075671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 2","termid":"PBO:0075671"}


id: MOD:00878
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"dimethyl pimelimidate modification from Unimod - Mechanism of the reaction of imidoesters with amines","definition_xrefs":["Unimod:456","PubMed:7171546","URL:http://dx.doi.org/10.1021/ja00877a017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidoester crosslink dimethyl pimelimidate doubly attached","synonyms":[{"name":"Both ends of crosslink attached to same peptide","type":"related"},{"name":"Xlink:DMP","type":"related"}],"termid":"MOD:00878"}


id: PBO:0046081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 6","termid":"PBO:0046081"}


id: PBO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_disulfide_level","termid":"PBO:0030692"}


id: PR:O13981
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc1 gene.","definition_xrefs":["UniProtKB:O13981","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.07","synonyms":[{"name":"Spom972h-emc1","type":"exact"}],"termid":"PR:O13981"}


id: PR:000036914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom-gad8","type":"exact"}],"termid":"PR:000036914"}


id: GO:0046686
data:
  {"annotated_genes":["SJAG_02599","SJAG_04516","SJAG_00044","SJAG_01351","SJAG_00988","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93226,93542,104595,114306,89476,93187],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[93188,104596,89477,85090,93543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cadmium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadmium sensitivity/resistance","type":"related"},{"name":"response to cadmium","type":"exact"}],"termid":"GO:0046686","terms_by_termid":{"GO:0071276":null,"GO:0098849":null}}


id: RO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_start_location","termid":"RO:0002338"}


id: GO:1901144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of insulin.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin biosynthetic process (obsolete GO:1901144)","synonyms":[{"name":"insulin anabolism","type":"exact"},{"name":"insulin biosynthesis","type":"exact"},{"name":"insulin biosynthetic process","type":"exact"},{"name":"insulin formation","type":"exact"},{"name":"insulin synthesis","type":"exact"}],"termid":"GO:1901144"}


id: PBO:0069846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1132, pseudogene","termid":"PBO:0069846"}


id: GO:0071739
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"IgD immunoglobulin complex, circulating","synonyms":[{"name":"IgD antibody","type":"exact"}],"termid":"GO:0071739"}


id: PBO:0061932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 3","termid":"PBO:0061932"}


id: GO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfonate + 2-oxoglutarate + O2 = sulfite + aminoacetaldehyde + succinate + CO2.","definition_xrefs":["GOC:clt","PMID:10482536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfonate dioxygenase activity","synonyms":[{"name":"sulfonate/alpha-ketoglutarate dioxygenase activity","type":"exact"},{"name":"sulphonate dioxygenase activity","type":"exact"}],"termid":"GO:0000907"}


id: GO:0018478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate + CoA + NAD(P)+ = acetyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["EC:1.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"malonate-semialdehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:RXN-9958"],"synonyms":[{"name":"3-oxopropanoate:NAD(P)+ oxidoreductase (decarboxylating, CoA-acetylating)","type":"related"},{"name":"malonic semialdehyde oxidative decarboxylase activity","type":"exact"}],"termid":"GO:0018478"}


id: PBO:0086935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; required for endosome-to-Golgi, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6","termid":"PBO:0086935"}


id: PBO:0061805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 3 like 1","termid":"PBO:0061805"}


id: GO:0050734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxycinnamoyl group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"hydroxycinnamoyltransferase activity","termid":"GO:0050734"}


id: PBO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC21C3.07c is related to the C-terminal region of YOR239W","termid":"PBO:0004671"}


id: PBO:0058041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4262","termid":"PBO:0058041"}


id: PBO:0043017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 1","termid":"PBO:0043017"}


id: PBO:0065613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 7","termid":"PBO:0065613"}


id: PBO:0073225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 1","termid":"PBO:0073225"}


id: FYPO:0002765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased tRNA methyltransferase activity","termid":"FYPO:0001772"},{"relation_name":"is_a","term_name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased tRNA (guanine(9)-N(1))-methyltransferase activity","synonyms":[{"name":"reduced tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"}],"termid":"FYPO:0002765"}


id: PBO:0058581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715a","termid":"PBO:0058581"}


id: GO:0031332
data:
  {"annotated_genes":["SJAG_02594","SJAG_04061","SJAG_03706","SJAG_02621","SJAG_03916","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114027],"is_not":false,"summary":null,"term":"GO:0031332"},{"annotations":[85041,114191,84987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033167"},{"annotations":[114196,108373,87449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"Any protein complex that mediates the effects of small interfering RNAs on gene expression. Most known examples contain one or more members of the Argonaute family of proteins.","definition_xrefs":["GOC:mah","PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_03042":null,"SJAG_03706":null,"SJAG_03916":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNAi effector complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031332","terms_by_termid":{"GO:0030958":null,"GO:0031332":null,"GO:0033167":null}}


id: PBO:0047477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 4","termid":"PBO:0047477"}


id: GO:0071281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron ion","synonyms":[{"name":"cellular response to iron","type":"exact"}],"termid":"GO:0071281"}


id: GO:1901456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to toluene","termid":"GO:1901454"},{"relation_name":"positively_regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to toluene","synonyms":[{"name":"activation of response to toluene","type":"narrow"},{"name":"up regulation of response to toluene","type":"exact"},{"name":"up-regulation of response to toluene","type":"exact"},{"name":"upregulation of response to toluene","type":"exact"}],"termid":"GO:1901456"}


id: GO:0015625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ferric-hydroxamate(out) = ADP + phosphate + ferric-hydroxamate(in).","definition_xrefs":["PMID:1551849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type ferric hydroxamate transporter activity","secondary_identifiers":["MetaCyc:ABC-9-RXN","GO:0015622","GO:0015409","EC:7.2.2.16","MetaCyc:3.6.3.34-RXN","MetaCyc:ABC-11-RXN","GO:0102026","GO:0015623"],"synonyms":[{"name":"ATP-dependent ferric-hydroxamate transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent iron-chelate transporter activity","type":"broad"},{"name":"ATPase-coupled ferric-hydroxamate transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled iron-chelate transporter activity","type":"broad"},{"name":"ferric-hydroxamate ABC transporter","type":"narrow"},{"name":"ferric-hydroxamate porter activity","type":"broad"},{"name":"ferric-hydroxamate transmembrane transporter activity","type":"broad"},{"name":"ferric-hydroxamate-transporting ATPase activity","type":"exact"},{"name":"iron-chelate-transporting ATPase activity","type":"broad"}],"termid":"GO:0015625"}


id: GO:0016612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a molybdenum-iron cluster found in many species. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the molybdenum-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:11566366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"molybdenum-iron nitrogenase complex","secondary_identifiers":["MetaCyc:CPLX-525","MetaCyc:CPLX-186"],"synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"related"}],"termid":"GO:0016612"}


id: GO:1904624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","PMID:22988142","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"}


id: GO:0043454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2.","definition_xrefs":["GOC:krc","Wikipedia:Alkyne","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkyne metabolic process","termid":"GO:0043452"},{"relation_name":"is_a","term_name":"acetylenic compound catabolic process","termid":"GO:0120248"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkyne catabolic process","synonyms":[{"name":"alkyne breakdown","type":"exact"},{"name":"alkyne catabolism","type":"exact"},{"name":"alkyne degradation","type":"exact"}],"termid":"GO:0043454"}


id: GO:0005974
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen gamma chain (obsolete GO:0005974)","synonyms":[{"name":"fibrinogen gamma chain","type":"exact"}],"termid":"GO:0005974"}


id: GO:0004764
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87291],"is_not":false,"summary":null,"term":"GO:0004764"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+.","definition_xrefs":["EC:1.1.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:17737","EC:1.1.1.282","KEGG_REACTION:R06847","MetaCyc:SHIKIMATE-5-DEHYDROGENASE-RXN"],"synonyms":[{"name":"5-dehydroshikimate reductase activity","type":"related"},{"name":"5-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NADP(+) 5-oxidoreductase activity","type":"related"},{"name":"shikimate:NADP(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0004764","terms_by_termid":{"GO:0004764":null}}


id: PBO:0068798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 35, pseudogene","termid":"PBO:0068798"}


id: PBO:0069306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 562, pseudogene","termid":"PBO:0069306"}


id: PBO:0030712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_heat_shock","termid":"PBO:0030712"}


id: GO:0033252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-lactamase activity, the hydrolysis of a beta-lactam to yield a substituted beta-amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of beta-lactamase activity","termid":"GO:0033252"}


id: PBO:0058553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6132","termid":"PBO:0058553"}


id: GO:0016839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a carbon-oxygen bond. Enzymes with this activity are 'miscellaneous' carbon-oxygen lyases that cannot be grouped into one of the specific subclasses of the carbon-oxygen lyases.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-oxygen lyase activity (obsolete GO:0016839)","synonyms":[{"name":"other carbon-oxygen lyase activity","type":"exact"}],"termid":"GO:0016839"}


id: PBO:0081856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 789","termid":"PBO:0081856"}


id: PBO:0053021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LANCL1 antisense RNA 1","termid":"PBO:0053021"}


id: PBO:0039416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 1","termid":"PBO:0039416"}


id: PBO:0039090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase","termid":"PBO:0039090"}


id: PBO:0049712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1","termid":"PBO:0049712"}


id: PBO:0085944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; nearly identical to Sno3p; expression is induced before the diauxic shift and also in the absence of thiamin","termid":"PBO:0085944"}


id: GO:0047029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + (R)-3-(4-hydroxyphenyl)lactate = NADPH + H+ + 3-(4-hydroxyphenyl)pyruvate.","definition_xrefs":["RHEA:52692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-4-hydroxyphenyllactate dehydrogenase (NADP+) activity","secondary_identifiers":["https://github.com/geneontology/go-ontology/issues/21412","MetaCyc:RXN-7632"],"synonyms":[{"name":"aromatic 2-oxoacid reductase activity","type":"broad"},{"name":"hydroxyphenylpyruvate reductase activity","type":"broad"},{"name":"phenylpyruvate reductase activity","type":"related"}],"termid":"GO:0047029"}


id: PBO:0042553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 16","termid":"PBO:0042553"}


id: PBO:0057237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: GO:0061652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of FAT10 from one protein to another via the reaction X-FAT10 + Y = Y-FAT10 + X, where both the X-FAT10 and Y-FAT10 linkages are thioester bonds between the C-terminal amino acid of FAT10 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAT10 transferase activity","termid":"GO:0019775"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0019787","GO:0016746","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"FAT10 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061652"}


id: PBO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 40","termid":"PBO:0052800"}


id: PBO:0059753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 27","termid":"PBO:0059753"}


id: PBO:0036382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl3, DIPSY family","termid":"PBO:0036382"}


id: GO:0042436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds that contain an indole (2,3-benzopyrrole) skeleton.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole-containing compound catabolic process","synonyms":[{"name":"indole derivative catabolic process","type":"exact"},{"name":"indole derivative catabolism","type":"exact"},{"name":"indole-containing compound breakdown","type":"exact"},{"name":"indole-containing compound catabolism","type":"exact"},{"name":"indole-containing compound degradation","type":"exact"}],"termid":"GO:0042436"}


id: PBO:0040718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 transcription coactivator","termid":"PBO:0040718"}


id: GO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the spleen. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"spleen development","termid":"GO:0048536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen trabecula formation","synonyms":[{"name":"spleen trabecula biogenesis","type":"related"},{"name":"spleen trabeculation","type":"exact"}],"termid":"GO:0060345"}


id: PBO:0064872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 5","termid":"PBO:0064872"}


id: PBO:0070624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 8","termid":"PBO:0070624"}


id: GO:0033728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + NADP+ = divinyl chlorophyllide a + NADPH + H+.","definition_xrefs":["EC:1.3.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"divinyl chlorophyllide a 8-vinyl-reductase activity","secondary_identifiers":["MetaCyc:RXN-5286","RHEA:14449"],"synonyms":[{"name":"4VCR","type":"related"},{"name":"[4-vinyl]chlorophyllide a reductase activity","type":"related"},{"name":"chlorophyllide-a:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0033728"}


id: PBO:0004513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.16","termid":"PBO:0004513"}


id: GO:2000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"positively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of proline metabolic process","synonyms":[{"name":"positive regulation of proline metabolism","type":"exact"}],"termid":"GO:2000216"}


id: GO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of follicles surrounded by two or more layers of granulosa cells up to the onset of antrum formation.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"},{"relation_name":"part_of","term_name":"multi-layer follicle stage","termid":"GO:0048162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"preantral ovarian follicle growth","termid":"GO:0001546"}


id: GO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-b2, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-b2 complex","synonyms":[{"name":"Pcdhga1-Pcdhgb2 complex","type":"narrow"}],"termid":"GO:0071186"}


id: PBO:0006167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part","termid":"PBO:0006167"}


id: PBO:0074226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC45A4 antisense RNA 1","termid":"PBO:0074226"}


id: MOD:01408
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazoline-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4S)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK (4S)-thiazoline-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine (4S)-thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01408"}


id: PBO:0052907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-4","termid":"PBO:0052907"}


id: PBO:0055082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2500","termid":"PBO:0055082"}


id: PATO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's being capable to be permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permeable","synonyms":[{"name":"porous","type":"related"}],"termid":"PATO:0000982"}


id: GO:0030858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell differentiation","synonyms":[{"name":"activation of epithelial cell differentiation","type":"narrow"},{"name":"stimulation of epithelial cell differentiation","type":"narrow"},{"name":"up regulation of epithelial cell differentiation","type":"exact"},{"name":"up-regulation of epithelial cell differentiation","type":"exact"},{"name":"upregulation of epithelial cell differentiation","type":"exact"}],"termid":"GO:0030858"}


id: GO:0018149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between or within protein chains.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking","termid":"GO:0018149"}


id: PBO:0033747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033747"}


id: PBO:0080385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog C","termid":"PBO:0080385"}


id: PR:Q96VG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ost4 gene.","definition_xrefs":["UniProtKB:Q96VG2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.15c","synonyms":[{"name":"OTase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ost4","type":"exact"},{"name":"oligosaccharyl transferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96VG2"}


id: FYPO:0003648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing xanthine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on xanthine nitrogen source","synonyms":[{"name":"abolished growth on xanthine nitrogen source","type":"broad"},{"name":"abolished vegetative cell population growth on xanthine nitrogen source","type":"exact"},{"name":"abolished xanthine utilization","type":"related"},{"name":"cell population growth on xanthine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0003648"}


id: FYPO:0006792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which urease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal urease activity","termid":"FYPO:0003642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished urease activity","synonyms":[{"name":"urease activity abolished","type":"exact"}],"termid":"FYPO:0006792"}


id: PBO:0064179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XF, pseudogene","termid":"PBO:0064179"}


id: GO:1990676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the trans portion of the Golgi complex.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna membrane","termid":"GO:0032580"},{"relation_name":"part_of","term_name":"Golgi trans cisterna","termid":"GO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"Golgi trans cisterna membrane","synonyms":[{"name":"trans-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990676"}


id: GO:0015291
data:
  {"annotated_genes":["SJAG_01541","SJAG_02780","SJAG_02463","SJAG_01406","SJAG_00057","SJAG_01183","SJAG_00339","SJAG_04698","SJAG_03820","SJAG_04616","SJAG_03951","SJAG_02050","SJAG_00612","SJAG_01145","SJAG_04028","SJAG_04673","SJAG_04136","SJAG_01033","SJAG_04068","SJAG_00276","SJAG_03595","SJAG_00233","SJAG_04406","SJAG_01960","SJAG_03401","SJAG_00275","SJAG_04506","SJAG_04714","SJAG_04241","SJAG_00547","SJAG_03608","SJAG_02779","SJAG_01872","SJAG_04905","SJAG_02958","SJAG_03606","SJAG_01059","SJAG_04096","SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89280,113162,108425,89512,85188,92667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015297"},{"annotations":[107065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[99014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[111705,87383,86899,94499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[72181,110335,75413,110328,113334,99144,106821,88669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[87955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[113338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[115104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015398"},{"annotations":[96832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[87384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[88750,94220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[99947,111940,112658,108893,105878,90225,100778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[101853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[106296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[85525,92914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[107133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[88235,88241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[108432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[91717,84671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy, not direct ATP coupling. 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id: GO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any leukotriene following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid metabolite production involved in inflammatory response","termid":"GO:0002538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukotriene production involved in inflammatory response","synonyms":[{"name":"leukotriene production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002540"}


id: GO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + H+(out) = amino acid(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"amino acid:proton symporter activity","secondary_identifiers":["Reactome:R-HSA-8875623"],"synonyms":[{"name":"cation/amino acid symporter","type":"broad"},{"name":"hydrogen:amino acid symporter activity","type":"exact"}],"termid":"GO:0005280"}


id: GO:0005951
data:
  {"annotated_genes":["SJAG_00412","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102667,107239],"is_not":false,"summary":null,"term":"GO:0005951"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.","definition_xrefs":["PMID:8626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine-specific carbamoyl phosphate synthetase complex","type":"narrow"},{"name":"carbamoyl phosphate synthase complex","type":"exact"},{"name":"carbamoyl-phosphate synthase arginine-specific complex","type":"narrow"}],"termid":"GO:0005951","terms_by_termid":{"GO:0005951":null}}


id: PBO:0028522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zearalenone","termid":"PBO:0028522"}


id: PBO:0064753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 89","termid":"PBO:0064753"}


id: PBO:0071095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 97","termid":"PBO:0071095"}


id: PBO:0079981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 19","termid":"PBO:0079981"}


id: GO:0009822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alkaloids, nitrogen containing natural products not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).","definition_xrefs":["GOC:lr","ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkaloid catabolic process","synonyms":[{"name":"alkaloid breakdown","type":"exact"},{"name":"alkaloid catabolism","type":"exact"},{"name":"alkaloid degradation","type":"exact"}],"termid":"GO:0009822"}


id: MOD:00941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:488","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydropyrrolizidine alkaloid (dehydroretronecine) derivatized cysteine","synonyms":[{"name":"DHP","type":"related"},{"name":"Dehydropyrrolizidine alkaloid (dehydroretronecine) on cysteines","type":"related"}],"termid":"MOD:00941"}


id: GO:0045179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane on the apical edge of a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"apical cortex","termid":"GO:0045179"}


id: GO:0015986
data:
  {"annotated_genes":["SJAG_01471","SJAG_00133","SJAG_02105","SJAG_MIT37","SJAG_00985","SJAG_00438","SJAG_00542","SJAG_00915","SJAG_07003","SJAG_MIT15","SJAG_03114","SJAG_04122","SJAG_04422","SJAG_05204","SJAG_03925","SJAG_02598","SJAG_02564","SJAG_00836","SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66451],"is_not":false,"summary":null,"term":"GO:0015986"},{"annotations":[89027,90048,97973,99815,85336,101156,115163,104955,111993,89450,91013,99195,115158,115167,103975,99844,104065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114117],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"proton motive force-driven ATP synthesis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ATP synthesis coupled proton transport","type":"exact"},{"name":"chemiosmosis","type":"broad"}],"termid":"GO:0015986","terms_by_termid":{"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: PBO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific cysteine protease, OTU family, Otu2","termid":"PBO:0002781"}


id: GO:1902425
data:
  {"annotated_genes":["SJAG_05290","SJAG_00082","SJAG_03126","SJAG_03048","SJAG_04140","SJAG_04280","SJAG_01837","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86199,101327,108125,112159],"is_not":false,"summary":null,"term":"GO:1902425"},{"annotations":[86203,98539,107366,89986,112829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation.","definition_xrefs":["GOC:TermGenie","PMID:22065639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051987"},{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"positively_regulates","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"narrow"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"narrow"},{"name":"activation of attachment of spindle microtubules to mitotic chromosome","type":"narrow"},{"name":"activation of mitotic bipolar attachment","type":"related"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"positive regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"positive regulation of mitotic bipolar attachment","type":"related"},{"name":"up regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"up regulation of mitotic bipolar attachment","type":"related"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"up-regulation of mitotic bipolar attachment","type":"related"},{"name":"upregulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"upregulation of mitotic bipolar attachment","type":"related"}],"termid":"GO:1902425","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: PBO:0029592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029592"}


id: PR:O94302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RFT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03770","PANTHER:PTHR13117:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharide translocation protein rft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.19","secondary_identifiers":["UniProtKB:O94302"],"synonyms":[{"name":"Spom972h-RFT1","type":"exact"}],"termid":"PR:O94302"}


id: GO:1990238
data:
  {"annotated_genes":["SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97328],"is_not":false,"summary":null,"term":"GO:1990238"},{"annotations":[97329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within a double-stranded DNA molecule by creating internal breaks.","definition_xrefs":["PMID:22885404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"double-stranded DNA endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA endodeoxyribonuclease activity","type":"exact"},{"name":"dsDNA-specific endodeoxyribonuclease activity","type":"related"}],"termid":"GO:1990238","terms_by_termid":{"GO:0106332":null,"GO:1990238":null}}


id: PBO:0076640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 2","termid":"PBO:0076640"}


id: GO:0052888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-dihydroorotate + fumarate = orotate + succinate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroorotate oxidase (fumarate) activity (obsolete GO:0052888)","secondary_identifiers":["MetaCyc:RXN-9929","KEGG_REACTION:R01867","EC:1.3.98.1"],"synonyms":[{"name":"DHOD activity","type":"broad"},{"name":"DHOdase activity","type":"broad"},{"name":"DHodehase activity","type":"broad"},{"name":"dihydoorotic acid dehydrogenase activity","type":"broad"},{"name":"dihydroorotate dehydrogenase activity","type":"broad"},{"name":"dihydroorotate oxidase (fumarate) activity","type":"exact"},{"name":"dihydroorotate oxidase activity","type":"broad"}],"termid":"GO:0052888"}


id: PR:Q10239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chz1 gene.","definition_xrefs":["UniProtKB:Q10239","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z-specific chaperone chz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.06c","synonyms":[{"name":"Spom972h-chz1","type":"exact"}],"termid":"PR:Q10239"}


id: GO:1900946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"positively_regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isoprene metabolic process","synonyms":[{"name":"activation of 2-methyl-1,3-butadiene metabolic process","type":"narrow"},{"name":"activation of 2-methyl-1,3-butadiene metabolism","type":"narrow"},{"name":"activation of hemiterpene metabolic process","type":"narrow"},{"name":"activation of hemiterpene metabolism","type":"narrow"},{"name":"activation of isoprene metabolic process","type":"narrow"},{"name":"activation of isoprene metabolism","type":"narrow"},{"name":"positive regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"positive regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"positive regulation of hemiterpene metabolic process","type":"exact"},{"name":"positive regulation of hemiterpene metabolism","type":"exact"},{"name":"positive regulation of isoprene metabolism","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"up regulation of hemiterpene metabolic process","type":"exact"},{"name":"up regulation of hemiterpene metabolism","type":"exact"},{"name":"up regulation of isoprene metabolic process","type":"exact"},{"name":"up regulation of isoprene metabolism","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"up-regulation of hemiterpene metabolic process","type":"exact"},{"name":"up-regulation of hemiterpene metabolism","type":"exact"},{"name":"up-regulation of isoprene metabolic process","type":"exact"},{"name":"up-regulation of isoprene metabolism","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"upregulation of hemiterpene metabolic process","type":"exact"},{"name":"upregulation of hemiterpene metabolism","type":"exact"},{"name":"upregulation of isoprene metabolic process","type":"exact"},{"name":"upregulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900946"}


id: GO:0033515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including alpha-aminoadipate; in this pathway, L-lysine is converted to 2-aminoadipate-6-semialdehyde by lysine 6-aminotransferase.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0055086","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"L-lysine catabolic process using lysine 6-aminotransferase","synonyms":[{"name":"L-lysine breakdown using lysine 6-aminotransferase","type":"exact"},{"name":"L-lysine degradation using lysine 6-aminotransferase","type":"exact"}],"termid":"GO:0033515"}


id: GO:0032203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the formation of a telomere at a non-telomeric double-stranded DNA end that involves the activity of a telomerase enzyme.","definition_xrefs":["PMID:11902675","GOC:cjm","GOC:ns","PMID:8622671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere assembly","termid":"GO:0032202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0032200"],"is_obsolete":false,"name":"telomere formation via telomerase","termid":"GO:0032203"}


id: PBO:0027202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transiently_misoriented_mitotic_spindle","termid":"PBO:0027202"}


id: PBO:0046190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 1","termid":"PBO:0046190"}


id: GO:0015529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: raffinose(out) + H+(out) = raffinose(in) + H+(in).","definition_xrefs":["TC:2.A.1.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"raffinose transmembrane transporter activity","termid":"GO:0015158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"raffinose:proton symporter activity","synonyms":[{"name":"raffinose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015529"}


id: GO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-4 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-4 receptor binding","synonyms":[{"name":"IL-4","type":"narrow"},{"name":"interleukin-4 receptor ligand","type":"narrow"}],"termid":"GO:0005136"}


id: GO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine modification","termid":"GO:0018198"}


id: GO:0009826
data:
  {"annotated_genes":["SJAG_00514","SJAG_04509","SJAG_03581","SJAG_02169","SJAG_00244","SJAG_01017","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86065,92022,90749],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[84119,90199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[86921],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[111198],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell elongation","type":"narrow"},{"name":"cell growth along one axis","type":"exact"},{"name":"cell growth in one dimension","type":"exact"},{"name":"cell morphogenesis by unidimensional growth","type":"exact"},{"name":"polar cell growth","type":"exact"},{"name":"polarized cell growth","type":"exact"}],"termid":"GO:0009826","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: GO:0009303
data:
  {"annotated_genes":["SJAG_01698","SJAG_00139","SJAG_02653","SJAG_01128","SJAG_00692","SJAG_02691","SJAG_02070","SJAG_01562","SJAG_00202","SJAG_05331","SJAG_01948","SJAG_00731","SJAG_02815","SJAG_01707","SJAG_01444","SJAG_03144","SJAG_03956","SJAG_02747","SJAG_02871","SJAG_04261","SJAG_02813","SJAG_04106","SJAG_04766","SJAG_01313","SJAG_02101","SJAG_01765","SJAG_03578"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[91582,108100,112598,89343,105321,105911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042790"},{"annotations":[83910,85758,98839,106852,114049,91921,91386,90088,109970,109683,83909,110374,86582,88210,101944,109308,88819,111668,109684,99501,105952,101032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"rRNA metabolic process","termid":"GO:0016072"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00202":null,"SJAG_00692":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01707":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02691":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"rRNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rRNA biosynthesis","type":"broad"},{"name":"rRNA biosynthetic process","type":"broad"},{"name":"rRNA synthesis","type":"broad"}],"termid":"GO:0009303","terms_by_termid":{"GO:0006362":null,"GO:0042790":null,"GO:0042791":null}}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_03204","SJAG_00096","SJAG_03596","SJAG_00077","SJAG_00605","SJAG_00797","SJAG_04483","SJAG_04077","SJAG_03081","SJAG_02233","SJAG_01249","SJAG_02587","SJAG_02173","SJAG_00310","SJAG_00109","SJAG_00218","SJAG_00340","SJAG_02196","SJAG_00948","SJAG_02989","SJAG_01029","SJAG_05268","SJAG_00415","SJAG_03640","SJAG_03464","SJAG_04851","SJAG_05272","SJAG_04018","SJAG_01738","SJAG_04026","SJAG_04685","SJAG_01835","SJAG_02093","SJAG_02102","SJAG_01134","SJAG_00852","SJAG_05207","SJAG_04209","SJAG_04363","SJAG_02392","SJAG_00784","SJAG_03345","SJAG_04266","SJAG_00368","SJAG_01774","SJAG_04666","SJAG_00254","SJAG_04850","SJAG_02916","SJAG_02444","SJAG_04732","SJAG_04789","SJAG_04238","SJAG_01290","SJAG_04583","SJAG_02605","SJAG_04509","SJAG_02260","SJAG_01806","SJAG_01086","SJAG_04875","SJAG_01114","SJAG_02435","SJAG_01307","SJAG_01242"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84295,105472],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[90885,90075,91253,101985,106018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[85459,100968,111910,96673,95414,98659,102742,100614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[84177,107029,95135,103196,98576,84110,85928,88589,88755,99885,102743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[92017,102744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[110903,114876,103941,110530,91019,114438,98399,91007,96964,86320,90233,88052,91020,91450,100156,102713,87754,111741,113465,98406,109201,110630,91021,113894,86123,112421,109906,98405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[106707],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[96608,99922],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[109995,102644,90397,105180,103290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[95932,90887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[92417,86158,89994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00605":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_00948":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02102":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02392":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03204":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04266":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: GO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart","PMID:15797462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion formation","termid":"GO:0003272"}


id: PBO:0054382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1778","termid":"PBO:0054382"}


id: GO:1905069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an allantois over time, from its formation to the mature structure.","definition_xrefs":["PMID:21470579","GO_REF:0000094","PMID:17440924","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantois development","synonyms":[{"name":"allantoic bud development","type":"related"}],"termid":"GO:1905069"}


id: PBO:0055050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2465","termid":"PBO:0055050"}


id: PBO:0030979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation","termid":"PBO:0030979"}


id: PBO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aftiphilin","termid":"PBO:0039019"}


id: PBO:0012252
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of SIP Complex","termid":"PBO:0012252"}


id: GO:0032195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["GOC:pf","PMID:9394012","PMID:9276759","PMID:23494323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"post-lysosomal vacuole","synonyms":[{"name":"post-lysosome","type":"exact"},{"name":"postlysosome","type":"exact"}],"termid":"GO:0032195"}


id: GO:0006027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan catabolic process","termid":"GO:0006026"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan catabolic process","synonyms":[{"name":"glycosaminoglycan breakdown","type":"exact"},{"name":"glycosaminoglycan catabolism","type":"exact"},{"name":"glycosaminoglycan degradation","type":"exact"}],"termid":"GO:0006027"}


id: GO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by an opioid binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"},{"name":"opioid receptor, adenylate cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0031635"}


id: PBO:0072674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 1","termid":"PBO:0072674"}


id: MOD:02050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-leucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-leucine residue","synonyms":[{"name":"XlnkLeu","type":"exact"}],"termid":"MOD:02050"}


id: PBO:0088131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; involved in vacuolar protein sorting; also detected in the mitochondria","termid":"PBO:0088131"}


id: PBO:0038413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_relation_between_entities","termid":"PBO:0038413"}


id: MOD:01357
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-lysine residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated L-lysine.","definition_xrefs":["PubMed:12686488","PubMed:16335955","Unimod:510#K"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6-dimethyl-L-lysine","termid":"MOD:00084"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"2x(13)C,4x(2)H labeled dimethylated residue","termid":"MOD:00927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated L-lysine","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:01357"}


id: GO:0014899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the heart, in which a decrease in cell mass and then in heart size occurs due to shrinking of the individual cells. The shrinkage is caused by protein degradation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"},{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle atrophy","termid":"GO:0014899"}


id: GO:0039636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of cell wall biogenesis in the host organism. Cell wall biogenesis includes the biosynthesis of constituent macromolecules, and the assembly and arrangement of these constituent parts.","definition_xrefs":["GOC:bf","GOC:jl","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host cell wall biogenesis","termid":"GO:0039636"}


id: PBO:0066286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member K, pseudogene","termid":"PBO:0066286"}


id: PBO:0084615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease; involved in N-terminal processing of pro-a-factor to mature form; expressed in both haploids and diploids; one of two yeast homologs of human insulin-degrading enzyme (hIDE); homolog Axl1p is also involved in processing of pro-a-factor","termid":"PBO:0084615"}


id: GO:0010291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carotene + a reduced electron acceptor + O2 = C3-hydroxylated carotene + an oxidized electron acceptor + H2O. This is a general reaction to represent the C3 hydroxylation of the beta ring of a carotene.","definition_xrefs":["MetaCyc:MONOMER-12386","PMID:16492736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"carotene beta-ring hydroxylase activity","secondary_identifiers":["GO:0042411"],"synonyms":[{"name":"beta-carotene hydroxylase activity","type":"narrow"}],"termid":"GO:0010291"}


id: FYPO:0003635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which U2 snRNP binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex binding","termid":"FYPO:0003632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished U2 snRNP binding","synonyms":[{"name":"U2 snRNP binding abolished","type":"exact"}],"termid":"FYPO:0003635"}


id: FYPO:0006721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Cdr2 medial cortical node complex does not occur.","definition_xrefs":["PomBase:mah","PMID:28924043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to Cdr2 medial cortical node complex","synonyms":[{"name":"abolished protein localisation to Cdr2 medial cortical node complex","type":"exact"},{"name":"abolished protein localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"protein absent from Cdr2 medial cortical node complex","type":"related"},{"name":"protein localization to Cdr2 medial cortical node complex abolished","type":"exact"},{"name":"protein localization to Cdr2 medial cortical node complex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006721"}


id: GO:0016312
data:
  {"annotated_genes":["SJAG_01702","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004441"},{"annotations":[104467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol bisphosphate + H2O = myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"inositol bisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:57840","Reactome:R-HSA-6809565","Reactome:R-HSA-6809561"],"termid":"GO:0016312","terms_by_termid":{"GO:0004441":null,"GO:0030487":null}}


id: PBO:0063344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 4","termid":"PBO:0063344"}


id: PBO:0027521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle","termid":"PBO:0027521"}


id: PBO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 3","termid":"PBO:0046685"}


id: PR:O74426
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 32A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.10","secondary_identifiers":["UniProtKB:O74426"],"synonyms":[{"name":"Spom972h-STK32A","type":"exact"}],"termid":"PR:O74426"}


id: PBO:0056330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 11","termid":"PBO:0056330"}


id: FYECO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrous chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl2","synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron dichloride added","type":"related"},{"name":"iron(II) chloride","type":"exact"}],"termid":"FYECO:0000174"}


id: GO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the absence of centrosomes. Formation is initiated by the nucleation of microtubules (MTs) in the vicinity of condensed chromatin. MTs then attach to and congress around the chromatin due to activity of microtubule motors. A bipolar spindle is formed by focusing of the terminal ends of the MT array into spindle poles by molecular motors and cross-linking proteins.","definition_xrefs":["GOC:expert_rg","GOC:mtg_sensu","PMID:15034926","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"anastral spindle assembly","termid":"GO:0055048"}


id: GO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043003)","synonyms":[{"name":"activation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"}],"termid":"GO:0043003"}


id: FYPO:0005521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome organization is abnormal. Nucleosome organization results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.","definition_xrefs":["PomBase:mah","GO:0034728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome organization","synonyms":[{"name":"abnormal nucleosome organisation","type":"exact"},{"name":"abnormal nucleosome organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0005521"}


id: MOD:00178
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(ADP-ribosyl)-L-cysteine.","definition_xrefs":["RESID:AA0169","PubMed:15842200","PubMed:3863818","Unimod:213#C","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(ADP-ribosyl)-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]sulfanyl)propanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"ADPRibCys","type":"exact"},{"name":"MOD_RES ADP-ribosylcysteine","type":"exact"},{"name":"S-(ADP-ribosyl)- (on Cysteine)","type":"exact"},{"name":"S-(ADP-ribosyl)-L-cysteine","type":"exact"},{"name":"S-L-cysteine alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"S-alpha-D-ribofuranosyl-L-cysteine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:00178"}


id: PBO:0051837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase M","termid":"PBO:0051837"}


id: PBO:0068744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 1","termid":"PBO:0068744"}


id: PBO:0070930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 38","termid":"PBO:0070930"}


id: PBO:0053186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEO1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0053186"}


id: PBO:0064823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3E","termid":"PBO:0064823"}


id: PBO:0049502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 9, pseudogene","termid":"PBO:0049502"}


id: PR:O43061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug136 gene.","definition_xrefs":["UniProtKB:O43061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 136 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.08","synonyms":[{"name":"Spom972h-mug136","type":"exact"}],"termid":"PR:O43061"}


id: PBO:0109940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal Prp43","termid":"PBO:0109940"}


id: GO:1904710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:19208546","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of granulosa cell apoptotic process","termid":"GO:1904708"},{"relation_name":"positively_regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulosa cell apoptotic process","synonyms":[{"name":"activation of granulosa cell apoptosis","type":"narrow"},{"name":"activation of granulosa cell apoptotic process","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptotic process","type":"narrow"},{"name":"positive regulation of granulosa cell apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904710"}


id: PBO:0084707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane ADP/ATP translocator; exchanges cytosolic ADP for mitochondrially synthesized ATP; phosphorylated; Aac1p is a minor isoform while Pet9p is the major ADP/ATP translocator; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084707"}


id: GO:0102965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + 2 H+ + 2 NADPH = a long-chain primary fatty alcohol + CoA + 2 NADP+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pz","RHEA:52716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alcohol-forming long-chain fatty acyl-CoA reductase activity","secondary_identifiers":["EC:1.2.1.84","MetaCyc:RXN-9344"],"synonyms":[{"name":"alcohol-forming fatty acyl-CoA reductase activity","type":"broad"}],"termid":"GO:0102965"}


id: GO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation and organization of a platelet, a non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.","definition_xrefs":["GOC:vk","CL:0000233","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet morphogenesis","termid":"GO:0036344"}


id: PR:Q09827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec61 subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00296","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein Sec61 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.02c","secondary_identifiers":["UniProtKB:Q09827"],"synonyms":[{"name":"Spom972h-SEC61G","type":"exact"}],"termid":"PR:Q09827"}


id: GO:0060925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to ventricular cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the ventricle. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell differentiation","termid":"GO:0055012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell fate commitment","synonyms":[{"name":"ventricular cardiomyocyte cell fate commitment","type":"exact"},{"name":"ventricular heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060925"}


id: PBO:0058303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4677","termid":"PBO:0058303"}


id: GO:0070731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic GMP (cGMP), into, out of or within a cell.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transport","termid":"GO:0001408"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cGMP transport","synonyms":[{"name":"cyclic GMP transport","type":"exact"}],"termid":"GO:0070731"}


id: GO:0000771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation or adhesion of compatible mating types via complementary cell-cell interactions prior to the formation of irreversible cellular contacts during conjugation.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete agglutination involved in conjugation (obsolete GO:0000771)","termid":"GO:0000771"}


id: PBO:0003720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpc10","termid":"PBO:0003720"}


id: PBO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 1","termid":"PBO:0043435"}


id: FYPO:0004581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter is increased.","definition_xrefs":["GO:0007329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"},{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased transcriptional response to pheromone","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004581"}


id: PBO:0050943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 14","termid":"PBO:0050943"}


id: PBO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamidoimidazolesuccinocarboxamide synthase, SAICAR synthetase, Ade7","termid":"PBO:0003500"}


id: GO:0047761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + butanoate = ADP + butanoyl phosphate + H+.","definition_xrefs":["RHEA:13585","EC:2.7.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"butyrate kinase activity","secondary_identifiers":["KEGG_REACTION:R01688","MetaCyc:BUTYRATE-KINASE-RXN"],"synonyms":[{"name":"ATP:butanoate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0047761"}


id: GO:0048093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of male pigmentation","termid":"GO:0048088"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"male pigmentation","termid":"GO:0048094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male pigmentation","synonyms":[{"name":"activation of male pigmentation","type":"narrow"},{"name":"stimulation of male pigmentation","type":"narrow"},{"name":"up regulation of male pigmentation","type":"exact"},{"name":"up-regulation of male pigmentation","type":"exact"},{"name":"upregulation of male pigmentation","type":"exact"}],"termid":"GO:0048093"}


id: GO:0042694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a muscle cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["CL:0000187","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"muscle cell fate commitment","termid":"GO:0042693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate specification","termid":"GO:0042694"}


id: PBO:0011138
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHOsphate metabolism","termid":"PBO:0011138"}


id: GO:0004382
data:
  {"annotated_genes":["SJAG_03676","SJAG_01595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96485,110133],"is_not":false,"summary":null,"term":"GO:0004382"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP + H2O = GMP + phosphate.","definition_xrefs":["PMID:2989286","RHEA:22156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01595":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"GDP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GUANOSINE-DIPHOSPHATASE-RXN","EC:3.6.1.42"],"synonyms":[{"name":"GDP diphosphatase activity","type":"related"},{"name":"GDP phosphohydrolase activity","type":"related"},{"name":"GDPase activity","type":"related"},{"name":"guanosine 5'-diphosphatase activity","type":"related"},{"name":"guanosine diphosphatase activity","type":"exact"},{"name":"guanosine-diphosphatase activity","type":"exact"}],"termid":"GO:0004382","terms_by_termid":{"GO:0004382":null}}


id: PBO:0045717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 1","termid":"PBO:0045717"}


id: GO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of activation-induced cell death of T cells.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activation-induced cell death of T cells","synonyms":[{"name":"regulation of AICD","type":"broad"},{"name":"regulation of activated T cell apoptosis","type":"broad"},{"name":"regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"regulation of antigen-driven apoptosis","type":"broad"}],"termid":"GO:0070235"}


id: GO:1903854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:23437011","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"negatively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stress response to copper ion","synonyms":[{"name":"down regulation of response to copper ion stress","type":"exact"},{"name":"down regulation of response to copper toxicity","type":"related"},{"name":"down regulation of stress response to copper ion","type":"exact"},{"name":"down-regulation of response to copper ion stress","type":"exact"},{"name":"down-regulation of response to copper toxicity","type":"related"},{"name":"down-regulation of stress response to copper ion","type":"exact"},{"name":"downregulation of response to copper ion stress","type":"exact"},{"name":"downregulation of response to copper toxicity","type":"related"},{"name":"downregulation of stress response to copper ion","type":"exact"},{"name":"inhibition of response to copper ion stress","type":"narrow"},{"name":"inhibition of response to copper toxicity","type":"related"},{"name":"inhibition of stress response to copper ion","type":"narrow"},{"name":"negative regulation of response to copper ion stress","type":"exact"},{"name":"negative regulation of response to copper toxicity","type":"related"}],"termid":"GO:1903854"}


id: MOD:00251
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and the 5'-end of DNA through a phosphodiester bond to form O-(phospho-5'-DNA)-L-serine.","definition_xrefs":["PubMed:7142163","RESID:AA0246","PubMed:7265205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-DNA)-L-serine","synonyms":[{"name":"(S)-2-amino-3-(5'-deoxyribonucleic acid phosphonoxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-serine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-serine","type":"exact"},{"name":"O-(phospho-5'-DNA)-L-serine","type":"exact"},{"name":"O3-(phospho-5'-DNA)-L-serine","type":"exact"},{"name":"O3-L-serine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00251"}


id: GO:0006303
data:
  {"annotated_genes":["SJAG_04372","SJAG_00640","SJAG_05372","SJAG_02527","SJAG_02237","SJAG_01677","SJAG_16460","SJAG_05373","SJAG_01076","SJAG_00441","SJAG_03048","SJAG_00823","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84766,85371,92051,96083,101177,107111,107892,110440,112477,112947],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[110060,112476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[92053],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[98523],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[103568],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.","definition_xrefs":["PMID:24837021","PMID:10827453","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00640":null,"SJAG_00823":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_02237":null,"SJAG_02527":null,"SJAG_03048":null,"SJAG_04199":null,"SJAG_04372":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ","type":"exact"}],"termid":"GO:0006303","terms_by_termid":{"GO:0006303":null,"GO:0061674":null,"GO:0097680":null,"GO:2001033":null,"GO:2001034":null}}


id: FYPO:0001467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases normally following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete normal increase in steady-state intracellular calcium level following extracellular calcium stimulus (obsolete FYPO:0001467)","synonyms":[{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001467"}


id: PBO:0082928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aldehyde dehydrogenase; involved in ethanol oxidation and beta-alanine biosynthesis; uses NAD+ as the preferred coenzyme; expression is stress induced and glucose repressed; very similar to Ald3p","termid":"PBO:0082928"}


id: GO:0140896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a double-stranded DNA or RNA from another organism to cytosolic cyclic GMP-AMP (cGAMP) synthase (cGAS) that activates innate immune responses through production of the second messenger cGAMP, which activates the adaptor STING.","definition_xrefs":["PMID:27648547","PMID:34261127","PMID:34261128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cGAS/STING signaling pathway","termid":"GO:0140896"}


id: PBO:0048390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 1","termid":"PBO:0048390"}


id: PBO:0091191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val","termid":"PBO:0091191"}


id: PBO:0056626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 7","termid":"PBO:0056626"}


id: PBO:0028843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_assembly","termid":"PBO:0028843"}


id: PBO:0058676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6804","termid":"PBO:0058676"}


id: PBO:0082675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; Cgi121p is dispensable for tRNA modification; other complex members are Bud32p, Kae1p, Pcc1p, and Gon7p","termid":"PBO:0082675"}


id: GO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host chemokine activity.","definition_xrefs":["UniProtKB-KW:KW-1086","GOC:bf","VZ:813","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host chemokine activity (obsolete GO:0039553)","synonyms":[{"name":"down-regulation by virus of host chemokine activity","type":"exact"},{"name":"downregulation by virus of host chemokine activity","type":"exact"},{"name":"inhibition by virus of host chemokine activity","type":"narrow"},{"name":"inhibition of host chemokines by virus","type":"narrow"},{"name":"negative regulation by virus of host chemokine activity","type":"exact"}],"termid":"GO:0039553"}


id: PBO:0066362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 regulator of GUCY2D","termid":"PBO:0066362"}


id: FYPO:0001954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased calcium import","synonyms":[{"name":"decreased calcium import during mitotic cell cycle","type":"related"},{"name":"decreased calcium import during vegetative growth","type":"exact"},{"name":"decreased calcium import into cell","type":"exact"},{"name":"decreased calcium ion import","type":"exact"},{"name":"decreased calcium ion import across plasma membrane","type":"exact"},{"name":"decreased calcium uptake","type":"exact"},{"name":"decreased calcium uptake into intracellular compartments","type":"related"},{"name":"decreased cellular calcium import","type":"exact"},{"name":"reduced calcium import","type":"exact"}],"termid":"FYPO:0001954"}


id: GO:0071288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mercury ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mercury ion","termid":"GO:0046689"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mercury ion","synonyms":[{"name":"cellular response to mercuric ion","type":"exact"},{"name":"cellular response to mercury","type":"exact"}],"termid":"GO:0071288"}


id: GO:0035360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the peroxisome proliferator activated receptor signaling pathway.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of peroxisome proliferator activated receptor signaling pathway","termid":"GO:0035358"},{"relation_name":"positively_regulates","term_name":"peroxisome proliferator activated receptor signaling pathway","termid":"GO:0035357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of peroxisome proliferator activated receptor signaling pathway","synonyms":[{"name":"positive regulation of PPAR signaling pathway","type":"exact"},{"name":"positive regulation of peroxisome proliferator activated receptor signalling pathway","type":"exact"},{"name":"positive regulation of peroxisome proliferator-activated receptor signaling pathway","type":"exact"}],"termid":"GO:0035360"}


id: GO:0098807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is part of a chloroplast thylakoid membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast thylakoid membrane","termid":"GO:0009535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}


id: GO:0007015
data:
  {"annotated_genes":["SJAG_02700","SJAG_01384","SJAG_02566","SJAG_01964","SJAG_01732","SJAG_01993","SJAG_01894","SJAG_01268","SJAG_04498","SJAG_04624","SJAG_00677","SJAG_04100","SJAG_00279","SJAG_02075","SJAG_03088","SJAG_01943","SJAG_02245","SJAG_03086","SJAG_00970","SJAG_04621","SJAG_00521","SJAG_03380","SJAG_04479","SJAG_03455","SJAG_00938","SJAG_03025","SJAG_02228","SJAG_01388","SJAG_02864","SJAG_03011","SJAG_04982","SJAG_04172","SJAG_04703","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101722],"is_not":false,"summary":null,"term":"GO:0007015"},{"annotations":[85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051764"},{"annotations":[94089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090135"},{"annotations":[114746,88501,73878,101294,97874,85532,90003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[104297,114747,95801,112331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061572"},{"annotations":[112332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[88716,97076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[101295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051639"},{"annotations":[64217,88502,90004,93894,94998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[85573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045010"},{"annotations":[94203,104298,94459,85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[98896,101312,84377,99472,94999,95835,103319,86872,94090,96010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[88688,88503,84482,110477,95059,114748],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[112334,104299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[101298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[94205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"},{"annotations":[87067],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"},{"annotations":[103778],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"},{"annotations":[101315,98898,97908,86029,86874],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93897,110480],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"},{"relation_name":"part_of","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01388":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04172":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin filament organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin filament organisation","type":"exact"},{"name":"regulation of actin filament localization","type":"narrow"}],"termid":"GO:0007015","terms_by_termid":{"GO:0007015":null,"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0032231":null,"GO:0034314":null,"GO:0034316":null,"GO:0042989":null,"GO:0045010":null,"GO:0051016":null,"GO:0051017":null,"GO:0051639":null,"GO:0051764":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0090135":null,"GO:0110009":null,"GO:1903479":null}}


id: GO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"},{"relation_name":"is_a","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}


id: PR:O60064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mannose-1-phosphate guanyltransferase alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03828","PANTHER:PTHR22572:SF15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.02","secondary_identifiers":["UniProtKB:O60064"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"GTP-mannose-1-phosphate guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"Spom972h-GMPPA","type":"exact"}],"termid":"PR:O60064"}


id: GO:0045898
data:
  {"annotated_genes":["SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0044085","GO:0065003","GO:0006351"],"is_obsolete":false,"name":"regulation of RNA polymerase II transcription preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"related"}],"termid":"GO:0045898","terms_by_termid":{"GO:0045899":null}}


id: PBO:0081546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 462","termid":"PBO:0081546"}


id: PBO:0047554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 11","termid":"PBO:0047554"}


id: PBO:0049047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37 like 1","termid":"PBO:0049047"}


id: PBO:0066320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring-box 1","termid":"PBO:0066320"}


id: PBO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc2","termid":"PBO:0002477"}


id: GO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin transferase activity.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC regulator","type":"narrow"},{"name":"SCF complex regulator","type":"narrow"},{"name":"anaphase-promoting complex regulator","type":"narrow"},{"name":"regulation of ubiquitin transferase activity","type":"exact"},{"name":"ubiquitin transferase regulator","type":"related"},{"name":"ubiquitin-protein transferase regulator","type":"related"}],"termid":"GO:0051438"}


id: FYPO:0005328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal error-free translesion synthesis","termid":"FYPO:0005325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"normal error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"}],"termid":"FYPO:0005328"}


id: SO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by proteomics data.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_peptide_spectrum_match","termid":"SO:0002071"}


id: GO:0075261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"}


id: PBO:0059873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 10","termid":"PBO:0059873"}


id: MOD:00686
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-selenocysteine (not known as a natural, post-translational modification process).","definition_xrefs":["RESID:AA0022#CYS","PubMed:6217842","Unimod:162#C","PubMed:2037562","PubMed:10523135","PubMed:2963330","PubMed:6714945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium substitution for sulfur","termid":"MOD:00007"},{"relation_name":"is_a","term_name":"L-selenocysteine residue","termid":"MOD:00031"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteine (Cys)","synonyms":[{"name":"(2R)-2-amino-3-selanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-selanylpropanoic acid","type":"exact"},{"name":"3-selenylalanine","type":"exact"},{"name":"L-selenocysteine","type":"exact"},{"name":"NON_STD Selenocysteine","type":"exact"},{"name":"SeCys","type":"exact"},{"name":"Sec(Cys)","type":"exact"},{"name":"selenium cysteine","type":"exact"}],"termid":"MOD:00686"}


id: SO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An alteration of the genome that leads to a change in the structure of one or more chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural_alteration","synonyms":[{"name":"structural alteration","type":"exact"}],"termid":"SO:0001785"}


id: SO:1000047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion that does not include the centromere.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paracentric","termid":"SO:0001519"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric_inversion","synonyms":[{"name":"paracentric inversion","type":"exact"}],"termid":"SO:1000047"}


id: PBO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 3","termid":"PBO:0044323"}


id: GO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by endosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis within endosome associated with antigen processing and presentation","synonyms":[{"name":"endosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002499"}


id: GO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = (S)-4,5-dihydroxypentane-2,3-dione + L-homocysteine.","definition_xrefs":["RHEA:17753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"S-ribosylhomocysteine lyase activity","secondary_identifiers":["EC:4.4.1.21","GO:0019138","KEGG_REACTION:R01291","MetaCyc:RIBOSYLHOMOCYSTEINASE-RXN"],"synonyms":[{"name":"LuxS","type":"related"},{"name":"S-(5-deoxy-D-ribos-5-yl)-L-homocysteine homocysteine-lyase [(4S)-4,5-dihydroxypentan-2,3-dione-forming]","type":"related"},{"name":"S-ribosylhomocysteinase activity","type":"exact"},{"name":"ribosylhomocysteinase activity","type":"exact"}],"termid":"GO:0043768"}


id: GO:0044423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a virion, a complete fully infectious extracellular virus particle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular_component","termid":"GO:0005575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion component","secondary_identifiers":["Wikipedia:Virus","GO:0019012"],"synonyms":[{"name":"complete virus particle","type":"related"},{"name":"virion","type":"related"},{"name":"virion part","type":"exact"}],"termid":"GO:0044423"}


id: PATO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's being altered or spoiled in color.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discolored","termid":"PATO:0000331"}


id: FYPO:0002555
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115626,115627,115634,115638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002555","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: PR:O42968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1E8.03c gene.","definition_xrefs":["UniProtKB:O42968","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1E8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1E8.03c","synonyms":[{"name":"Spom972h-SPBC1E8.03c","type":"exact"}],"termid":"PR:O42968"}


id: PBO:0036537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic R3H and G-patch domain protein Sqs2","termid":"PBO:0036537"}


id: GO:0015755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"fructose transmembrane transport","synonyms":[{"name":"fructose transport","type":"related"}],"termid":"GO:0015755"}


id: GO:0047006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 17-alpha,20-alpha-dihydroxypregn-4-en-3-one = NAD(P)H + H+ + 17-alpha-hydroxyprogesterone.","definition_xrefs":["EC:1.1.1.149","MetaCyc:1.1.1.149-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity","synonyms":[{"name":"20alpha-HSD","type":"related"},{"name":"20alpha-HSDH","type":"related"},{"name":"20alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"20alpha-hydroxysteroid dehydrogenase","type":"broad"},{"name":"20alpha-hydroxysteroid:NAD(P)+ 20-oxidoreductase activity","type":"broad"}],"termid":"GO:0047006"}


id: GO:1903384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:23261939","GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903377"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903383"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903751"},{"relation_name":"negatively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"protection against H2O2-induced neuron apoptosis","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron apoptosis","type":"related"}],"termid":"GO:1903384"}


id: PBO:0077620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 10 pseudogene 1","termid":"PBO:0077620"}


id: PBO:0047558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 3","termid":"PBO:0047558"}


id: MOD:00185
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-4'-bromophenylalanine.","definition_xrefs":["PubMed:2076468","PubMed:9033387","RESID:AA0176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-4'-bromophenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(4-bromophenyl)propanoic acid","type":"exact"},{"name":"4'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-4'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"p-bromophenylalanine","type":"exact"},{"name":"para-bromophenylalanine","type":"exact"}],"termid":"MOD:00185"}


id: PBO:0040027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 3","termid":"PBO:0040027"}


id: PBO:0082673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the eisosome required for proper eisosome assembly; similar to Uso1p; authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies; protein increases in abundance and relocalizes from plasma membrane to cytoplasm upon DNA replication stress; EIS1 has a paralog, YKL050C, that arose from the whole genome duplication","termid":"PBO:0082673"}


id: PBO:0061233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP10 ribonucleoprotein","termid":"PBO:0061233"}


id: GO:0070801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conidiophore development","termid":"GO:0070795"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"positively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore stalk development","termid":"GO:0070801"}


id: GO:0009581
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an external stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of external stimulus","type":"related"}],"termid":"GO:0009581","terms_by_termid":{"GO:0050982":null}}


id: PBO:0049878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hephaestin like 1","termid":"PBO:0049878"}


id: PR:Q10064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PI3/PI4-kinase family protein C1F5.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.11c","synonyms":[{"name":"Spom972h-tra2","type":"exact"}],"termid":"PR:Q10064"}


id: PR:Q9HGM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC543.05c gene.","definition_xrefs":["UniProtKB:Q9HGM6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter C543.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.05c","synonyms":[{"name":"Spom972h-SPBC543.05c","type":"exact"}],"termid":"PR:Q9HGM6"}


id: GO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-O-acetylneuraminate (free or glycosidically bound) + H2O = N-acetylneuraminate + acetate.","definition_xrefs":["PMID:1991039","EC:3.1.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylesterase activity","termid":"GO:0008126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"sialate O-acetylesterase activity","secondary_identifiers":["MetaCyc:RXN-13181","MetaCyc:RXN-13182"],"synonyms":[{"name":"N-acetylneuraminate acetyltransferase activity","type":"related"}],"termid":"GO:0001681"}


id: FYPO:0003797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal (i.e. indistinguishable from wild type) proportion of cells in the population undergoes conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mating","termid":"FYPO:0000760"},{"relation_name":"part_of","term_name":"normal mating","termid":"FYPO:0000760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000301"],"is_obsolete":false,"name":"normal conjugation frequency","synonyms":[{"name":"normal conjugation efficiency","type":"related"},{"name":"normal mating frequency","type":"exact"},{"name":"normal occurrence of conjugation","type":"exact"},{"name":"normal zygote formation","type":"related"}],"termid":"FYPO:0003797"}


id: PBO:0063158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 4","termid":"PBO:0063158"}


id: GO:0050867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell activation","synonyms":[{"name":"activation of cell activation","type":"narrow"},{"name":"stimulation of cell activation","type":"narrow"},{"name":"up regulation of cell activation","type":"exact"},{"name":"up-regulation of cell activation","type":"exact"},{"name":"upregulation of cell activation","type":"exact"}],"termid":"GO:0050867"}


id: PBO:0082774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU; required for pre-18S rRNA processing, biogenesis of the small ribosomal subunit; interacts with U3 snoRNA, Mpp10p and Bfr2p; contains WD repeats, and has homology to Spb1p","termid":"PBO:0082774"}


id: PBO:0057174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR325 host gene","termid":"PBO:0057174"}


id: GO:0090234
data:
  {"annotated_genes":["SJAG_04638","SJAG_01837","SJAG_03048","SJAG_00718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[85851,98533,112825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of kinetochore assembly, the aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centromere complex assembly","termid":"GO:0090230"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901719"],"synonyms":[{"name":"regulation of NMS complex assembly","type":"narrow"},{"name":"regulation of chromosome-kinetochore attachment","type":"narrow"}],"termid":"GO:0090234","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: PR:Q9Y7N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rox3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7N2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.05c","synonyms":[{"name":"RNA polymerase II mediator complex protein rox3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rox3","type":"exact"},{"name":"mediator complex subunit 19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N2"}


id: FYPO:0005016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of acetyl groups to residues in an 18S rRNA molecule is abolished.","definition_xrefs":["PomBase:mah","PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rRNA modification","termid":"FYPO:0005015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished 18S rRNA acetylation","synonyms":[{"name":"18S rRNA acetylation abolished","type":"exact"},{"name":"abolished 18S rRNA acetylation at C1297 and C1815","type":"narrow"},{"name":"abolished 18S rRNA acetylation during mitotic cell cycle","type":"related"},{"name":"abolished 18S rRNA acetylation during vegetative growth","type":"exact"},{"name":"abolished 18S rRNA acetylation on C1297 and C1815","type":"exact"},{"name":"abolished 18s rRNA cytidine (1297 and 1815) acetylation","type":"narrow"}],"termid":"FYPO:0005016"}


id: PBO:0058674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6802","termid":"PBO:0058674"}


id: GO:1901068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanosine-containing compounds (guanosines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine-containing compound metabolic process","synonyms":[{"name":"guanosine-containing compound metabolism","type":"exact"},{"name":"guanosines metabolic process","type":"exact"},{"name":"guanosines metabolism","type":"exact"}],"termid":"GO:1901068"}


id: PBO:0069787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1073, pseudogene","termid":"PBO:0069787"}


id: PBO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein zeta","termid":"PBO:0042685"}


id: PBO:0058006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3929","termid":"PBO:0058006"}


id: PBO:0055075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2492","termid":"PBO:0055075"}


id: GO:1904848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:TermGenie","GOC:BHF_miRNA","PMID:23233752","GOC:rph","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"},{"relation_name":"negatively_regulates","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell chemotaxis to fibroblast growth factor","synonyms":[{"name":"down regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"down-regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"downregulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"inhibition of cell chemotaxis to fibroblast growth factor","type":"narrow"}],"termid":"GO:1904848"}


id: PBO:0069161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 413, pseudogene","termid":"PBO:0069161"}


id: PBO:0074621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 20B","termid":"PBO:0074621"}


id: PBO:0064290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like B1","termid":"PBO:0064290"}


id: FYPO:0002075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in the population are viable at a high temperature in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population at high temperature (obsolete FYPO:0002075)","termid":"FYPO:0002075"}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["GOC:ems","ISBN:0140512888","ISBN:0070524300"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: PBO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 2","termid":"PBO:0070330"}


id: GO:0035364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GO:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"thymine transport","synonyms":[{"name":"5-methyluracil transport","type":"exact"},{"name":"thymine transmembrane transport","type":"exact"}],"termid":"GO:0035364"}


id: PBO:0089705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase beta subunit Atp2","termid":"PBO:0089705"}


id: PBO:0065212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin 2","termid":"PBO:0065212"}


id: FYPO:0002897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"decreased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002897"}


id: PBO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 1","termid":"PBO:0043460"}


id: GO:0072166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the posterior mesonephric tubule over time, from its initial formation to the mature structure. The posterior mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior mesonephric tubule development","termid":"GO:0072166"}


id: PBO:0027674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_beta-glucan_level","termid":"PBO:0027674"}


id: PBO:0063697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 1 pseudogene 1","termid":"PBO:0063697"}


id: GO:0097436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["PO_REF:00009","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into dormancy","synonyms":[{"name":"induction of dormancy","type":"exact"}],"termid":"GO:0097436"}


id: PBO:0079097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (GTA) 10-1","termid":"PBO:0079097"}


id: PBO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body","termid":"PBO:0030022"}


id: PBO:0003397
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Activated Ras1","termid":"PBO:0003397"}


id: PBO:0044048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP1 antisense RNA 1","termid":"PBO:0044048"}


id: PBO:0039866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 27 pseudogene 1","termid":"PBO:0039866"}


id: PBO:0062664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily F member 1","termid":"PBO:0062664"}


id: GO:0008410
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75650,87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008775"},{"annotations":[87620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008260"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70713","EC:2.8.3.-"],"termid":"GO:0008410","terms_by_termid":{"GO:0008260":null,"GO:0008775":null}}


id: PR:O42977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtp1 gene.","definition_xrefs":["UniProtKB:O42977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II assembly factor rtp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.08c","synonyms":[{"name":"Spom972h-rtp1","type":"exact"}],"termid":"PR:O42977"}


id: PBO:0058237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4525","termid":"PBO:0058237"}


id: PBO:0059782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 8","termid":"PBO:0059782"}


id: GO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:mah","GOC:dph","GOC:mtg_muscle","GOC:tb","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031450"}


id: SO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glutamyl tRNA (SO:0000260).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine_tRNA_primary_transcript","synonyms":[{"name":"glutamine tRNA primary transcript","type":"exact"}],"termid":"SO:0000217"}


id: GO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase III promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase III promoter during mitotic cell cycle (obsolete GO:0046023)","synonyms":[{"name":"mitotic regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from Pol III promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"}],"termid":"GO:0046023"}


id: PBO:0018225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein (predicted)","termid":"PBO:0018225"}


id: PBO:0084164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved negative regulator of RNA polymerase III; involved in tRNA processing and stability; inhibits tRNA degradation via rapid tRNA decay (RTD) pathway; binds N-terminal domain of Rpc160p subunit of Pol III to prevent closed-complex formation; regulated by phosphorylation mediated by TORC1, protein kinase A, Sch9p, casein kinase 2; localizes to cytoplasm during vegetative growth and translocates to nucleus and nucleolus under stress conditions","termid":"PBO:0084164"}


id: PBO:0088220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLLLP motif protein","termid":"PBO:0088220"}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: PBO:0065090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKACB divergent transcript","termid":"PBO:0065090"}


id: GO:0050859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell receptor signaling pathway","termid":"GO:0050855"},{"relation_name":"is_a","term_name":"negative regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050858"},{"relation_name":"negatively_regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell receptor signaling pathway","synonyms":[{"name":"down regulation of B cell receptor signaling pathway","type":"exact"},{"name":"down-regulation of B cell receptor signaling pathway","type":"exact"},{"name":"downregulation of B cell receptor signaling pathway","type":"exact"},{"name":"inhibition of B cell receptor signaling pathway","type":"narrow"},{"name":"negative regulation of B cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"negative regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"negative regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"negative regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"negative regulation of B-lymphocyte receptor signalling pathway","type":"exact"}],"termid":"GO:0050859"}


id: FYPO:0004180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein present as aggregates of misfolded protein is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24936793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased cellular protein aggregate level","synonyms":[{"name":"increased cellular protein aggregate level during mitotic cell cycle","type":"related"},{"name":"increased cellular protein aggregate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004180"}


id: GO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed inner ear sensory epithelia.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}


id: GO:1903849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["PMID:22269326","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aorta morphogenesis","termid":"GO:1903847"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aorta morphogenesis","synonyms":[{"name":"activation of aorta morphogenesis","type":"narrow"},{"name":"up regulation of aorta morphogenesis","type":"exact"},{"name":"up-regulation of aorta morphogenesis","type":"exact"},{"name":"upregulation of aorta morphogenesis","type":"exact"}],"termid":"GO:1903849"}


id: PBO:0077533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM246 antisense RNA 1","termid":"PBO:0077533"}


id: PBO:0089827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp78","termid":"PBO:0089827"}


id: PBO:0070398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor C","termid":"PBO:0070398"}


id: PBO:0034254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homotopy_relationship_with","termid":"PBO:0034254"}


id: PATO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000805 auditory value (obsolete PATO:0000805)","termid":"PATO:0000805"}


id: FYPO:0006599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006599"}


id: PBO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.10","termid":"PBO:0001654"}


id: PBO:0048005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 5","termid":"PBO:0048005"}


id: GO:0009917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a C-5 double bond in the B ring of a sterol.","definition_xrefs":["ISBN:0943088399"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol 5-alpha reductase activity (obsolete GO:0009917)","termid":"GO:0009917"}


id: PBO:0052709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 1","termid":"PBO:0052709"}


id: PBO:0030212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0030212"}


id: PBO:0048883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 2","termid":"PBO:0048883"}


id: PBO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitophagy receptor Atg43","termid":"PBO:0090144"}


id: PBO:0080668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 13","termid":"PBO:0080668"}


id: GO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of peroxisome organization.","definition_xrefs":["GOC:dph","PMID:7500953"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061424)","synonyms":[{"name":"positive regulation of peroxisome organisation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0061424"}


id: GO:0098829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of folic into the blood by absorption from the small intestine.","definition_xrefs":["GOC:BHF","GOC:hal","PMID:19762432","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal folate absorption","termid":"GO:0098829"}


id: FYPO:0002809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased 6,7-dimethyl-8-ribityllumazine synthase activity","synonyms":[{"name":"reduced 6,7-dimethyl-8-ribityllumazine synthase activity","type":"exact"}],"termid":"FYPO:0002809"}


id: PBO:0041878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated TTC17 interacting protein","termid":"PBO:0041878"}


id: GO:0033643
data:
  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"Any constituent part of a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell part","references_by_uniquename":{"PMID:30726171":null},"termid":"GO:0033643","terms_by_termid":{"GO:0085039":null}}


id: GO:0090029
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89494],"is_not":false,"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0010969"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060240"},{"relation_name":"negatively_regulates","term_name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0000750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090029","terms_by_termid":{"GO:0090029":null}}


id: FYPO:0006451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased methylated histone binding","synonyms":[{"name":"reduced methylated histone binding","type":"exact"}],"termid":"FYPO:0006451"}


id: PBO:0053261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 2","termid":"PBO:0053261"}


id: GO:0031470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle consisting of a proteinaceous coat and enzymes for the fixation of CO2. It augments the concentration of CO2 in the vicinity of RuBisCO to increase the efficiency of CO2 fixation under atmospheric conditions.","definition_xrefs":["GOC:js","PMID:8157606","PMID:8491708","PMID:28934381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"carboxysome","secondary_identifiers":["Wikipedia:Carboxysome"],"termid":"GO:0031470"}


id: PBO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P (predicted)","termid":"PBO:0000184"}


id: PBO:0087270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; regulates the organization and function of the actin cytoskeleton; inhibits clathrin-mediated endocytosis; phosphorylates the Pan1p and Sla1p subunits of the Pan1p-Sla1p-End3p complex, resulting in inhibition of complex formation; inhibits Scd5p through phosphorylation; phosphorylates Pan1p-interacting proteins, Ent1/2 and Yap1801/2; negatively regulated through autophosphorylation; functional overlap with ARK1","termid":"PBO:0087270"}


id: GO:0010101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the post-embryonic root are generated and organized. The post-embryonic root is the root formed after the embryonic phase has been completed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"},{"relation_name":"part_of","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic root morphogenesis","termid":"GO:0010101"}


id: GO:0001882
data:
  {"annotated_genes":["SJAG_04030","SJAG_00637","SJAG_04410","SJAG_03578"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"},{"annotations":[94326,90273,109310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032549"}]},"cv_name":"molecular_function","definition":"Binding to a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001882","terms_by_termid":{"GO:0032549":null,"GO:1905108":null}}


id: PR:O74539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.06","synonyms":[{"name":"Spom972h-mak3","type":"exact"},{"name":"his-Asp phosphorelay kinase phk2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74539"}


id: GO:0120177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the torso signaling pathway.","definition_xrefs":["GOC:ha","PMID:23732470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of torso signaling pathway","termid":"GO:0120175"},{"relation_name":"negatively_regulates","term_name":"torso signaling pathway","termid":"GO:0008293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of torso signaling pathway","termid":"GO:0120177"}


id: GO:0140929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-mannose(out) + Na+(out) = D-mannose(in) + Na+(in).","definition_xrefs":["PMID:22212718","PMID:23451068","PMID:24573086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"mannose:sodium symporter activity","termid":"GO:0140929"}


id: PBO:0060352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVIIIB","termid":"PBO:0060352"}


id: PBO:0067209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 274, pseudogene","termid":"PBO:0067209"}


id: PBO:0031002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_dithiothreitol","termid":"PBO:0031002"}


id: PBO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 20","termid":"PBO:0072415"}


id: PBO:0046612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K13 member 1","termid":"PBO:0046612"}


id: PBO:0029079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029079"}


id: GO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the facilitated diffusion of methylammonium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. Methylammonium is CH3NH2.","definition_xrefs":["GOC:mtg_transport","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylammonium transmembrane transporter activity","termid":"GO:0015200"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"methylammonium channel activity","termid":"GO:0015264"}


id: GO:0034729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to lysine at position 79 of the histone.","definition_xrefs":["GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 methylation (obsolete GO:0034729)","synonyms":[{"name":"histone H3 K79 methylation","type":"exact"},{"name":"histone H3K79me","type":"exact"},{"name":"histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:0034729"}


id: PBO:0027507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_acetone","termid":"PBO:0027507"}


id: PBO:0072599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remodeling and spacing factor 1","termid":"PBO:0072599"}


id: GO:0007172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell.","definition_xrefs":["GOC:bf","PMID:9646862","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0023052","GO:0044085"],"is_obsolete":false,"name":"signal complex assembly","synonyms":[{"name":"signal complex formation","type":"exact"}],"termid":"GO:0007172"}


id: PBO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom22 (predicted)","termid":"PBO:0001299"}


id: PBO:0077774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 1","termid":"PBO:0077774"}


id: PBO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIR1 pseudogene 3","termid":"PBO:0043176"}


id: PBO:0064976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 32, pseudogene","termid":"PBO:0064976"}


id: PBO:0029626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029626"}


id: PBO:0058651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6780a","termid":"PBO:0058651"}


id: PBO:0089743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 family protein, conserved in yeast and apicomplexa","termid":"PBO:0089743"}


id: PBO:0077823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3B","termid":"PBO:0077823"}


id: PBO:0073576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 7","termid":"PBO:0073576"}


id: GO:0150061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 3 (AMY3), a G protein-coupled receptor complex, on the surface of the target cell. The AMY3 signaling pathway can also be initiated by the amyloid-beta complex. AMY3 signaling results in increased import of calcium ions into the cytosol across plasma membrane, increased phosphorylation of ERK1/2, Act, and a PKA regulatory subunit II, as well as increased expression of cFos.","definition_xrefs":["PMID:22500019","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"amylin receptor 3 signaling pathway","synonyms":[{"name":"AMY3 signaling pathway","type":"exact"}],"termid":"GO:0150061"}


id: RO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X outer_layer_of Y iff:\\n. X :continuant that bearer_of some PATO:laminar\\n. X part_of Y\\n. exists Z :surface\\n. X has_boundary Z\\n. Z boundary_of Y\\n\\nhas_boundary: http://purl.obolibrary.org/obo/RO_0002002\\nboundary_of: http://purl.obolibrary.org/obo/RO_0002000","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounding_layer_of","termid":"RO:0002007"}


id: PBO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major vault protein","termid":"PBO:0060215"}


id: PATO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength.","definition_xrefs":["web:http://www.expertglossary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emmision wavelength","termid":"PATO:0002059"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: PBO:0002727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37 (predicted)","termid":"PBO:0002727"}


id: PBO:0029454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_N-glycan_processing","termid":"PBO:0029454"}


id: PBO:0065734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain containing 1","termid":"PBO:0065734"}


id: PATO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000869 prepulse inhibition value (obsolete PATO:0000869)","termid":"PATO:0000869"}


id: PBO:0064457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POGLUT2 pseudogene 1","termid":"PBO:0064457"}


id: PBO:0042207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin I family member 2","termid":"PBO:0042207"}


id: GO:0106228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutaryl-CoA + L-lysyl-[protein] = CoA + H+ + N6-glutaryl-L-lysyl-[protein].","definition_xrefs":["GOC:sp","PMID:31542297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"peptide glutaryltransferase activity","secondary_identifiers":["RHEA:18009"],"termid":"GO:0106228"}


id: PBO:0081562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 486","termid":"PBO:0081562"}


id: PBO:0049279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 2","termid":"PBO:0049279"}


id: PBO:0081604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 528","termid":"PBO:0081604"}


id: PBO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with LSB1 cooperatively inhibits the nucleation of actin filaments; short-lived protein whose levels increase in response to thermal stress; induces the formation of the [PIN+] and [RNQ+] prions when overproduced; PIN3 has a paralog, LSB1, that arose from the whole genome duplication","termid":"PBO:0085001"}


id: FYPO:0000282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a high temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at high temperature (obsolete FYPO:0000282)","synonyms":[{"name":"cell viable at high temperature","type":"exact"},{"name":"viable cell at high temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at high temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0000282"}


id: PBO:0084210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoaconitase; catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lysine biosynthesis pathway","termid":"PBO:0084210"}


id: PBO:0063396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6 pseudogene 1","termid":"PBO:0063396"}


id: GO:0061944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of K48-linked ubiquitination, a protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:23460740","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K48-linked ubiquitination","termid":"GO:0061945"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein K48-linked ubiquitination","termid":"GO:0070936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein K48-linked ubiquitination","termid":"GO:0061944"}


id: GO:0046974
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106660,106661],"is_not":false,"summary":null,"term":"GO:0046974"},{"annotations":[106662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[106663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[106664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of up to three methyl groups to the lysine residue at position 9 of the histone H3 protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0016741","GO:0008276","GO:0003674"],"is_obsolete":false,"name":"histone H3K9 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-427527","Reactome:R-HSA-427336"],"synonyms":[{"name":"histone H3K9 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K9 specific)","type":"exact"},{"name":"histone methylase activity (H3-K9 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K9 specific)","type":"exact"},{"name":"histone-H3K9 methyltransferase activity","type":"exact"}],"termid":"GO:0046974","terms_by_termid":{"GO:0046974":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null}}


id: PATO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation inhering in a bearer by virtue of the bearer's placement at an angle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angle","termid":"PATO:0002326"}


id: PBO:0062280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily I member 1","termid":"PBO:0062280"}


id: GO:0008637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological and physiological alterations undergone by mitochondria during apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"part_of","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"apoptotic mitochondrial changes","termid":"GO:0008637"}


id: GO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["ISBN:0815340729","GOC:jl","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}


id: GO:0009956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial pattern formation","synonyms":[{"name":"radial pattern specification","type":"narrow"}],"termid":"GO:0009956"}


id: PBO:0074178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 1","termid":"PBO:0074178"}


id: GO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"positively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair placode formation","termid":"GO:0061169"}


id: GO:1904842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitroglycerin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:25626975","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitroglycerin","synonyms":[{"name":"response to nitroglycerine","type":"exact"},{"name":"response to nitroglycerol","type":"exact"},{"name":"response to trinitroglycerin","type":"exact"},{"name":"response to trinitroglycerol","type":"exact"}],"termid":"GO:1904842"}


id: GO:2000766
data:
  {"annotated_genes":["SJAG_05000","SJAG_03501","SJAG_00423","SJAG_04291"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91770,95599,111004,114331],"is_not":false,"summary":null,"term":"GO:2000766"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00423":null,"SJAG_03501":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000766","terms_by_termid":{"GO:2000766":null}}


id: PBO:0053213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9C","termid":"PBO:0053213"}


id: GO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a cranial ganglion is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion morphogenesis","termid":"GO:0061552"},{"relation_name":"part_of","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion morphogenesis","synonyms":[{"name":"cranial ganglia morphogenesis","type":"related"}],"termid":"GO:0061559"}


id: FYPO:0002675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTDP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular dTDP level","synonyms":[{"name":"increased cellular dTDP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dTDP level during vegetative growth","type":"exact"},{"name":"increased dTDP accumulation","type":"related"}],"termid":"FYPO:0002675"}


id: FYECO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown in glucose minimal medium to stationary phase followed by transfer to minimal medium and continued growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth to stationary phase","termid":"FYECO:0000158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase in rich medium followed by transfer to minimal medium","termid":"FYECO:0000159"}


id: GO:0031245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the cell outer membrane consisting of gene products and protein complexes that are loosely bound to periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"periplasmic side of cell outer membrane","termid":"GO:0031241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of cell outer membrane","synonyms":[{"name":"extrinsic to internal leaflet of cell outer membrane","type":"narrow"},{"name":"extrinsic to internal side of cell outer membrane","type":"exact"},{"name":"extrinsic to internal side of outer membrane","type":"exact"},{"name":"extrinsic to periplasmic side of cell outer membrane","type":"exact"}],"termid":"GO:0031245"}


id: PBO:0083180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YIL100C-A","termid":"PBO:0083180"}


id: PBO:0041018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 1","termid":"PBO:0041018"}


id: SO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Bacterial Artificial Chromosome, a cloning vector that can be propagated as mini-chromosomes in a bacterial host.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC","synonyms":[{"name":"bacterial artificial chromosome","type":"exact"}],"termid":"SO:0000153"}


id: GO:1990244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2A-threonine (position 120) + ATP = histone H2A-phosphothreonine (position 120) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 120 of histone H2A.","definition_xrefs":["PMID:24140421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2A kinase activity","termid":"GO:0140995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0004672","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"histone H2AT120 kinase activity","synonyms":[{"name":"histone H2A-T120 kinase activity","type":"exact"},{"name":"histone kinase activity (H2A-T120 specific)","type":"exact"},{"name":"histone threonine kinase activity (H2A-T120 specific)","type":"exact"}],"termid":"GO:1990244"}


id: FYPO:0006850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition, instead of the normal G1 phase, and after the cell undergoes one cell division instead of the normal two, when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:9472077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","termid":"FYPO:0001001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen depletion","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen deprivation","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase following single cell division during nitrogen starvation","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition following single cell division during nitrogen starvation","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen starvation","type":"exact"},{"name":"mitotic G2 phase arrest following single cell division during nitrogen starvation","type":"exact"},{"name":"one cell division prior to cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006850"}


id: GO:0035051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiocyte differentiation","synonyms":[{"name":"cardiac cell differentiation","type":"exact"},{"name":"heart cell differentiation","type":"exact"}],"termid":"GO:0035051"}


id: PBO:0084349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the dynactin complex; dynactin is involved in partitioning the mitotic spindle between mother and daughter cells; putative ortholog of mammalian p150(glued)","termid":"PBO:0084349"}


id: PBO:0085065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of the NuA4 acetyltransferase complex; Esa1p-associated factor; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085065"}


id: PBO:0086855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication","termid":"PBO:0086855"}


id: GO:0031592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An amorphous structure surrounding the core of the centrosome, from which microtubules are nucleated; contains gamma-tubulin.","definition_xrefs":["GOC:kp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centrosomal corona","termid":"GO:0031592"}


id: PBO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1 Interacting Protein","termid":"PBO:0000303"}


id: PATO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that has been constantly realizing some of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active","termid":"PATO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutively active","termid":"PATO:0002356"}


id: GO:0062231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of larval somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of larval somatic muscle development","termid":"GO:0062229"},{"relation_name":"positively_regulates","term_name":"larval somatic muscle development","termid":"GO:0007526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval somatic muscle development","termid":"GO:0062231"}


id: PBO:0076530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 43","termid":"PBO:0076530"}


id: GO:0035027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to leading edge cell fate and their capacity to differentiate into leading edge cells. Leading edge cells are found at the front of a migrating epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"leading edge cell differentiation","termid":"GO:0035026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate commitment","termid":"GO:0035027"}


id: PBO:0044385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7 pseudogene 2","termid":"PBO:0044385"}


id: GO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in a behavioral response to a repeated stimulus. This is exemplified by the failure of a person to show a startle response to a loud noise that has been repeatedly presented.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habituation","secondary_identifiers":["Wikipedia:Habituation"],"termid":"GO:0046959"}


id: PBO:0040931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 2","termid":"PBO:0040931"}


id: PBO:0018067
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine DeAminase","termid":"PBO:0018067"}


id: PR:O14229
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc1 gene.","definition_xrefs":["UniProtKB:O14229","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.11c","synonyms":[{"name":"Spom972h-sfc1","type":"exact"},{"name":"TFIIIC subunit sfc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14229"}


id: GO:0015915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of fatty acyl groups into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A fatty acyl group is any acyl group derived from a fatty acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete fatty-acyl group transport (obsolete GO:0015915)","synonyms":[{"name":"fatty acyl transport","type":"exact"}],"termid":"GO:0015915"}


