# terms

id: PBO:0058302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4676","termid":"PBO:0058302"}


id: GO:0016886
data:
  {"annotated_genes":["SJAG_00956","SJAG_00198","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88741,110064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"},{"annotations":[88742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003909"},{"annotations":[86846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003972"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules, or two groups within a single molecule, via a phosphoric ester bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.5.-.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00956":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"ligase activity, forming phosphoric ester bonds","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016886","terms_by_termid":{"GO:0003909":null,"GO:0003910":null,"GO:0003972":null}}


id: PBO:0075620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 1","termid":"PBO:0075620"}


id: PBO:0068059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 364","termid":"PBO:0068059"}


id: GO:0032038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin II complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"},{"relation_name":"is_a","term_name":"myosin II binding","termid":"GO:0045159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"myosin II heavy chain binding","termid":"GO:0032038"}


id: GO:0090383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome acidification","synonyms":[{"name":"phagosomal acidification","type":"exact"}],"termid":"GO:0090383"}


id: GO:0098592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the apical region of the plasma membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of apical plasma membrane","termid":"GO:0098592"}


id: GO:1900981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"negatively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phenazine biosynthetic process","synonyms":[{"name":"down regulation of acridizine biosynthesis","type":"related"},{"name":"down regulation of acridizine biosynthetic process","type":"related"},{"name":"down regulation of azophenylene biosynthesis","type":"related"},{"name":"down regulation of azophenylene biosynthetic process","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down regulation of phenazine biosynthetic process","type":"exact"},{"name":"down-regulation of acridizine biosynthesis","type":"related"},{"name":"down-regulation of acridizine biosynthetic process","type":"related"},{"name":"down-regulation of azophenylene biosynthesis","type":"related"},{"name":"down-regulation of azophenylene biosynthetic process","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down-regulation of phenazine biosynthetic process","type":"exact"},{"name":"downregulation of acridizine biosynthesis","type":"related"},{"name":"downregulation of acridizine biosynthetic process","type":"related"},{"name":"downregulation of azophenylene biosynthesis","type":"related"},{"name":"downregulation of azophenylene biosynthetic process","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"downregulation of phenazine biosynthetic process","type":"exact"},{"name":"inhibition of acridizine biosynthesis","type":"related"},{"name":"inhibition of acridizine biosynthetic process","type":"related"},{"name":"inhibition of azophenylene biosynthesis","type":"related"},{"name":"inhibition of azophenylene biosynthetic process","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthesis","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthetic process","type":"related"},{"name":"inhibition of phenazine biosynthetic process","type":"narrow"},{"name":"negative regulation of acridizine biosynthesis","type":"related"},{"name":"negative regulation of acridizine biosynthetic process","type":"related"},{"name":"negative regulation of azophenylene biosynthesis","type":"related"},{"name":"negative regulation of azophenylene biosynthetic process","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900981"}


id: PBO:0067280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 361, pseudogene","termid":"PBO:0067280"}


id: PBO:0057288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 508","termid":"PBO:0057288"}


id: PBO:0054253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1637","termid":"PBO:0054253"}


id: PBO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain protein","termid":"PBO:0000503"}


id: GO:0051900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial depolarization","termid":"GO:0051900"}


id: FYPO:0001474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the mitotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body morphology","synonyms":[{"name":"abnormal mitotic SPB morphology","type":"exact"},{"name":"abnormal mitotic spindle pole body structure","type":"narrow"},{"name":"abnormal spindle pole body morphology during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0001474"}


id: GO:1902701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to propan-2-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:18727018","PMID:19539744","GO_REF:0000093"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to propan-2-ol (obsolete GO:1902701)","synonyms":[{"name":"pentose breakdown to propan-2-ol","type":"exact"},{"name":"pentose catabolic process to isopropanol","type":"exact"},{"name":"pentose catabolic process to isopropyl alcohol","type":"exact"},{"name":"pentose catabolism to propan-2-ol","type":"exact"},{"name":"pentose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902701"}


id: PR:P40387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha,alpha-trehalose-phosphate synthase [UDP-forming] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01450","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.03","secondary_identifiers":["UniProtKB:P40387"],"synonyms":[{"name":"Spom972h-otsA","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40387"}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PMID:21561865","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"rad9/Phos(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: PBO:0051913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB1 divergent transcript","termid":"PBO:0051913"}


id: GO:0018249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a water group from a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dehydration","synonyms":[{"name":"protein amino acid dehydration","type":"exact"}],"termid":"GO:0018249"}


id: PBO:0074009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6","termid":"PBO:0074009"}


id: GO:0000217
data:
  {"annotated_genes":["SJAG_02200","SJAG_01076","SJAG_01419","SJAG_01262","SJAG_02690","SJAG_02724","SJAG_03097","SJAG_02708","SJAG_02226","SJAG_02294","SJAG_04064","SJAG_04671","SJAG_04933","SJAG_04752","SJAG_05373","SJAG_02262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112954,89842,95524,107643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000405"},{"annotations":[90906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"},{"annotations":[95525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062037"},{"annotations":[102226,112957,96737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000406"},{"annotations":[90909,102227,91047,88832,93099,96804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000400"},{"annotations":[96738,102095,102229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000404"},{"annotations":[102794,77945,90910,95528,102231,96739,104685,84779,112962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000403"}]},"cv_name":"molecular_function","definition":"Binding to a DNA secondary structure element such as a four-way junction, a bubble, a loop, Y-form DNA, or a double-strand/single-strand junction.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_02200":null,"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_04064":null,"SJAG_04671":null,"SJAG_04752":null,"SJAG_04933":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"DNA secondary structure binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000217","terms_by_termid":{"GO:0000400":null,"GO:0000402":null,"GO:0000403":null,"GO:0000404":null,"GO:0000405":null,"GO:0000406":null,"GO:0062037":null}}


id: PBO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M transition checkpoint protein Sum2","termid":"PBO:0003113"}


id: PBO:0043246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 6","termid":"PBO:0043246"}


id: GO:0032109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a response to nutrient levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to nutrient levels","synonyms":[{"name":"activation of response to nutrient levels","type":"narrow"},{"name":"stimulation of response to nutrient levels","type":"narrow"},{"name":"up regulation of response to nutrient levels","type":"exact"},{"name":"up-regulation of response to nutrient levels","type":"exact"},{"name":"upregulation of response to nutrient levels","type":"exact"}],"termid":"GO:0032109"}


id: GO:1902535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A membrane invagination which involves another organism.","definition_xrefs":["GOC:TermGenie","GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane invagination (obsolete GO:1902535)","termid":"GO:1902535"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: RO:HOM0000053
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Xenology that results, not from the transfer of a gene between two species, but from a hybridization of two species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_xenology_relationship_with","termid":"RO:HOM0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_synology_relationship_with","synonyms":[{"name":"synologous to","type":"exact"}],"termid":"RO:HOM0000053"}


id: GO:0033578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["PMID:12042244","GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glycosylation in Golgi (obsolete GO:0033578)","synonyms":[{"name":"protein amino acid glycosylation in Golgi","type":"exact"},{"name":"terminal glycosylation","type":"narrow"}],"termid":"GO:0033578"}


id: PBO:0068739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 2, pseudogene","termid":"PBO:0068739"}


id: PBO:0003574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Switch One Like","termid":"PBO:0003574"}


id: GO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002840"}


id: PBO:0075447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 2","termid":"PBO:0075447"}


id: PATO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male receptivity","termid":"PATO:0001721"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male receptivity","synonyms":[{"name":"low male receptivity","type":"exact"}],"termid":"PATO:0001726"}


id: PBO:0055904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 27","termid":"PBO:0055904"}


id: GO:0031483
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class XIII myosin heavy chains and associated light chains.","direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin XIII complex","termid":"GO:0031483"}


id: PBO:0070700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 4","termid":"PBO:0070700"}


id: PBO:0074784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 5","termid":"PBO:0074784"}


id: PBO:0090031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8","termid":"PBO:0090031"}


id: PBO:0070170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 84 pseudogene","termid":"PBO:0070170"}


id: PBO:0089937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain protein Wwm1","termid":"PBO:0089937"}


id: PBO:0051017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 3","termid":"PBO:0051017"}


id: PR:Q09707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyltransferase C18B11.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.09c","synonyms":[{"name":"Spom972h-SPAC18B11.09c","type":"exact"}],"termid":"PR:Q09707"}


id: GO:0007300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transfer of constituents synthesized in the ovarian nurse cells to the oocyte, through the ring canals, as the egg chamber is growing. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ovarian nurse cell to oocyte transport","synonyms":[{"name":"nurse cell to oocyte transport","type":"broad"}],"termid":"GO:0007300"}


id: PBO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1 divergent transcript","termid":"PBO:0048796"}


id: GO:0062080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class Ib receptor activity","termid":"GO:0032394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}


id: PBO:0075678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene epoxidase","termid":"PBO:0075678"}


id: RO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_organization_of","termid":"RO:0002592"}


id: PBO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 7","termid":"PBO:0045883"}


id: PBO:0040412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit a2","termid":"PBO:0040412"}


id: PBO:0034196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_ends_with","termid":"PBO:0034196"}


id: GO:0004258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal amino acid with a broad specificity.","definition_xrefs":["EC:3.4.16.5"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar carboxypeptidase Y (obsolete GO:0004258)","synonyms":[{"name":"vacuolar carboxypeptidase Y","type":"exact"}],"termid":"GO:0004258"}


id: GO:0071164
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92216],"is_not":false,"summary":null,"term":"GO:0071164"}]},"cv_name":"molecular_function","definition":"Catalysis of two successive methyl transfer reactions from AdoMet to the N-2 atom of guanosine, thereby converting 7-methylguanosine in an RNA cap to 2,2,7 trimethylguanosine.","definition_xrefs":["PMID:18775984","PMID:11983179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"RNA cap trimethylguanosine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA trimethylguanosine synthase activity","type":"exact"},{"name":"cap hypermethylase activity","type":"exact"},{"name":"small nuclear RNA methyltransferase activity","type":"related"},{"name":"snRNA methyltransferase activity","type":"related"}],"termid":"GO:0071164","terms_by_termid":{"GO:0071164":null}}


id: PBO:0061037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 3","termid":"PBO:0061037"}


id: PBO:0054480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1880","termid":"PBO:0054480"}


id: FYPO:0003068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication forks is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:22682245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at replication forks during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to chromatin at replication forks during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to chromatin at replication forks during cellular response to HU","type":"exact"},{"name":"decreased protein localization to chromatin at replication forks during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at replication forks during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at replication forks during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0003068"}


id: PBO:0002867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp1","termid":"PBO:0002867"}


id: PBO:0074279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 1","termid":"PBO:0074279"}


id: PBO:0090879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase","termid":"PBO:0090879"}


id: PBO:0047928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q14.2)","termid":"PBO:0047928"}


id: PBO:0027206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell","termid":"PBO:0027206"}


id: FYPO:0002155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure during vegetative growth","synonyms":[{"name":"normal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"normal chromosome structure at telomeric region during vegetative growth","type":"exact"},{"name":"normal telomere structure during mitotic cell cycle","type":"related"},{"name":"normal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002155"}


id: GO:0086061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of a bundle of His cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in bundle of His cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086061"}


id: GO:0018453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxytetrahydrofuran = 2 H+ + 2 e- + butyrolactone.","definition_xrefs":["UM-BBD_reactionID:r0018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxytetrahydrofuran dehydrogenase activity","termid":"GO:0018453"}


id: _global:regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"_global:causally_downstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated_by","secondary_identifiers":["RO:0002334"],"termid":"_global:regulated_by"}


id: GO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the host cell mitochondrial envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host organelle outer membrane","termid":"GO:0039661"},{"relation_name":"is_a","term_name":"host cell mitochondrial membrane","termid":"GO:0044191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial outer membrane","termid":"GO:0044193"}


id: PBO:0073113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1","termid":"PBO:0073113"}


id: SO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:downstream","type":"related"},{"name":"Jannovar:downstream_gene_variant","type":"exact"},{"name":"VEP:downstream_gene_variant","type":"exact"},{"name":"downstream gene variant","type":"exact"},{"name":"snpEff:DOWNSTREAM","type":"exact"}],"termid":"SO:0001632"}


id: PBO:0089520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP 3'-tRNA nucleotidyltransferase Cca1","termid":"PBO:0089520"}


id: GO:0141024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a carbohydrate on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30736336","PMID:15210807","PMID:19527885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane carbohydrate","termid":"GO:0141024"}


id: PBO:0062917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y1","termid":"PBO:0062917"}


id: PBO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog","termid":"PBO:0004540"}


id: PBO:0017809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter Vht1","termid":"PBO:0017809"}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788","GO:0140098"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: PBO:0081210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 2","termid":"PBO:0081210"}


id: PBO:0050865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 2B (pseudogene)","termid":"PBO:0050865"}


id: PBO:0073594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature homeobox","termid":"PBO:0073594"}


id: PBO:0091995
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tfb6 annotation seems tenuous, SGD have not annotated","termid":"PBO:0091995"}


id: GO:0014910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell migration.","definition_xrefs":["GOC:mtg_muscle","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell migration","termid":"GO:0014910"}


id: GO:0009926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin in the stem from tip to base along the vector of gravity or basipetally.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"auxin polar transport","termid":"GO:0009926"}


id: PBO:0013230
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013230"}


id: PBO:0034062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_ends_during_or_before","termid":"PBO:0034062"}


id: GO:0033364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell secretory granule organization","synonyms":[{"name":"mast cell secretory granule maturation","type":"related"},{"name":"mast cell secretory granule organisation","type":"exact"},{"name":"mast cell secretory granule organization and biogenesis","type":"related"}],"termid":"GO:0033364"}


id: GO:0071590
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104668],"is_not":false,"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["PMID:19846558","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside biosynthetic process","termid":"GO:0071589"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinamide riboside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide biosynthetic process","type":"exact"},{"name":"nicotinamide riboside anabolism","type":"exact"},{"name":"nicotinamide riboside biosynthesis","type":"exact"},{"name":"nicotinamide riboside formation","type":"exact"},{"name":"nicotinamide riboside synthesis","type":"exact"}],"termid":"GO:0071590","terms_by_termid":{"GO:0071590":null}}


id: GO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of a carbon atom of a peptidyl-tryptophan residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-linked glycosylation","termid":"GO:0018103"},{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein C-linked glycosylation via tryptophan","synonyms":[{"name":"protein amino acid C-linked glycosylation via tryptophan","type":"exact"}],"termid":"GO:0018317"}


id: PBO:0090530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit E","termid":"PBO:0090530"}


id: PBO:0047486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1 pseudogene 2","termid":"PBO:0047486"}


id: PBO:0089026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase epsilon subunit Ost2","termid":"PBO:0089026"}


id: SO:1000157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transition where the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)eTp","type":"related"},{"name":"uninverted interchromosomal transposition","type":"exact"}],"termid":"SO:1000157"}


id: GO:0016127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sterol catabolic process","synonyms":[{"name":"sterol breakdown","type":"exact"},{"name":"sterol catabolism","type":"exact"},{"name":"sterol degradation","type":"exact"}],"termid":"GO:0016127"}


id: PBO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp3 (predicted)","termid":"PBO:0005140"}


id: GO:0070958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of bacterium","termid":"GO:0070956"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of gram-positive bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of gram-positive bacterium","type":"narrow"}],"termid":"GO:0070958"}


id: GO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH3 + CO2 = ADP + carbamoyl phosphate.","definition_xrefs":["EC:2.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"carbamate kinase activity","secondary_identifiers":["RHEA:10152","MetaCyc:CARBAMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:carbamate phosphotransferase activity","type":"related"},{"name":"CKase activity","type":"related"},{"name":"carbamoyl phosphokinase activity","type":"related"},{"name":"carbamyl phosphokinase activity","type":"related"}],"termid":"GO:0008804"}


id: PBO:0035757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_nucleation_from_eMTOC","termid":"PBO:0035757"}


id: PBO:0089859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase Hem14","termid":"PBO:0089859"}


id: GO:0018237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of urease by promoting the incorporation of nickel into the active site.","definition_xrefs":["GOC:mah","PMID:16244137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"urease activator activity","synonyms":[{"name":"urease activase activity","type":"exact"}],"termid":"GO:0018237"}


id: PBO:0060508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF attachment protein alpha","termid":"PBO:0060508"}


id: SO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:069"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five methoxycarbonylmethyl two prime O methyluridine","type":"exact"},{"name":"mcm5Um","type":"exact"}],"termid":"SO:0001361"}


id: GO:0050817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coagulation","synonyms":[{"name":"clotting","type":"exact"}],"termid":"GO:0050817"}


id: PBO:0003779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk23","termid":"PBO:0003779"}


id: PBO:0016100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase subunit Gem1 (predicted)","termid":"PBO:0016100"}


id: GO:0050356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + tropine = H+ + NADPH + tropinone.","definition_xrefs":["RHEA:18357","EC:1.1.1.206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tropine dehydrogenase activity","secondary_identifiers":["MetaCyc:TROPINE-DEHYDROGENASE-RXN","KEGG_REACTION:R02832"],"synonyms":[{"name":"tropine:NADP+ 3alpha-oxidoreductase activity","type":"related"}],"termid":"GO:0050356"}


id: PBO:0011137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pho7","termid":"PBO:0011137"}


id: PBO:0061671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 54","termid":"PBO:0061671"}


id: PBO:0041636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 3","termid":"PBO:0041636"}


id: PBO:0079653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 1","termid":"PBO:0079653"}


id: GO:0004303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estradiol-17-beta + NAD(P)+ = estrone + NAD(P)H + H+. The activity can use NAD+ or NADP+ as the acceptor.","definition_xrefs":["EC:1.1.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"estradiol 17-beta-dehydrogenase [NAD(P)] activity","secondary_identifiers":["Reactome:R-HSA-804969","Reactome:R-HSA-8862137","Reactome:R-HSA-5693390","Reactome:R-HSA-6810594","Reactome:R-HSA-5696822","MetaCyc:ESTRADIOL-17-BETA-DEHYDROGENASE-RXN"],"synonyms":[{"name":"17-beta-HSD activity","type":"broad"},{"name":"17-beta-estradiol dehydrogenase activity","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"17beta,20alpha-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"17beta-HSD","type":"related"},{"name":"17beta-estradiol dehydrogenase activity","type":"related"},{"name":"17beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"20alpha-hydroxysteroid dehydrogenase","type":"broad"},{"name":"estradiol 17-beta-dehydrogenase activity","type":"related"},{"name":"estradiol 17beta-dehydrogenase activity","type":"related"},{"name":"estradiol dehydrogenase activity","type":"related"},{"name":"estradiol-17beta:NAD(P)+ 17-oxidoreductase activity","type":"related"},{"name":"estrogen 17-oxidoreductase activity","type":"related"}],"termid":"GO:0004303"}


id: PR:O14136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19332:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.10","secondary_identifiers":["UniProtKB:O14136"],"synonyms":[{"name":"SPAC3C7.10","type":"related"},{"name":"Spom972h-PEX13","type":"exact"},{"name":"peroxin-13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14136"}


id: GO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host TYK2 (tyrosine kinase 2) activity by stopping, preventing or reducing phosphorylation and thereby activation of TYK2.","definition_xrefs":["PMID:10523853","PMID:16987978","PMID:19254804"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host TYK2 activity by negative regulation of TYK2 tyrosine phosphorylation (obsolete GO:0039575)","synonyms":[{"name":"inhibition by virus of host TYK2 activation","type":"broad"},{"name":"inhibition by virus of host TYK2 phosphorylation","type":"exact"}],"termid":"GO:0039575"}


id: PBO:0052091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 8","termid":"PBO:0052091"}


id: PBO:0049571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 8","termid":"PBO:0049571"}


id: PBO:0074689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68B","termid":"PBO:0074689"}


id: FYPO:0003275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nitrite ions. Cells stop growing (and may die) at a concentration of nitrite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to nitrite","synonyms":[{"name":"hypersensitive to nitrite","type":"exact"},{"name":"sensitive to nitrite during mitotic cell cycle","type":"related"},{"name":"sensitive to nitrite during vegetative growth","type":"exact"},{"name":"sensitive to nitrite ions","type":"exact"}],"termid":"FYPO:0003275"}


id: PBO:0062687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 8 pseudogene","termid":"PBO:0062687"}


id: SO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene (or the product of other non coding RNA genes. Micro RNAs are produced from precursor molecules (SO:0001244) that can form local hairpin structures, which ordinarily are processed (usually via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.","definition_xrefs":["PMID:11081512","PMID:12592000"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/MiRNA","http://en.wikipedia.org/wiki/StRNA","SO:0000649"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:miRNA","type":"exact"},{"name":"micro RNA","type":"exact"},{"name":"microRNA","type":"exact"},{"name":"small temporal RNA","type":"exact"},{"name":"stRNA","type":"exact"}],"termid":"SO:0000276"}


id: PBO:0045655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox B","termid":"PBO:0045655"}


id: FYPO:0001883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing caspofungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on caspofungin","synonyms":[{"name":"normal cell population growth in presence of caspofungin","type":"exact"},{"name":"normal cell population growth on caspofungin","type":"exact"},{"name":"normal cell population growth on glucan synthase inhibitor","type":"broad"},{"name":"normal cellular response to caspofungin","type":"related"},{"name":"normal vegetative cell population growth on caspofungin","type":"exact"}],"termid":"FYPO:0001883"}


id: FYPO:0000385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type). Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy","synonyms":[{"name":"autophagy: normal","type":"broad"}],"termid":"FYPO:0000385"}


id: PBO:0059924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 10","termid":"PBO:0059924"}


id: PBO:0044695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-dopachrome tautomerase pseudogene 1","termid":"PBO:0044695"}


id: PBO:0055626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3065","termid":"PBO:0055626"}


id: PBO:0049229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 3","termid":"PBO:0049229"}


id: GO:0043132
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of nicotinamide adenine dinucleotide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore; transport may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"NAD transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (oxidized) transport","type":"exact"},{"name":"NAD (reduced) transport","type":"exact"},{"name":"NADH transport","type":"exact"},{"name":"nicotinamide adenine dinucleotide transport","type":"exact"},{"name":"oxidized NAD transport","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide transport","type":"exact"},{"name":"reduced NAD transport","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide transport","type":"exact"}],"termid":"GO:0043132","terms_by_termid":{"GO:1990549":null}}


id: PBO:0083842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0083842"}


id: GO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of competence for transformation","synonyms":[{"name":"down regulation of establishment of competence for transformation","type":"exact"},{"name":"down-regulation of establishment of competence for transformation","type":"exact"},{"name":"downregulation of establishment of competence for transformation","type":"exact"},{"name":"inhibition of establishment of competence for transformation","type":"narrow"},{"name":"inhibitor of the establishment of competence for transformation activity","type":"related"}],"termid":"GO:0045808"}


id: PBO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1328 pseudogene 1","termid":"PBO:0052323"}


id: PBO:0067345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 442, pseudogene","termid":"PBO:0067345"}


id: MOD:02016
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-arachidonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-arachidonoylated residue","termid":"MOD:02017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-arachidonoyl-L-lysine","termid":"MOD:02016"}


id: GO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by a T cell triggered in response to the presence of a tumor cell.","definition_xrefs":["PMID:16730260","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}


id: PBO:0087519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; required for Elongator structural integrity","termid":"PBO:0087519"}


id: GO:0046599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a daughter centriole of an existing centriole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome duplication","termid":"GO:0010824"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"centriole replication","termid":"GO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of centriole replication","termid":"GO:0046599"}


id: MOD:00606
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:286","PubMed:9254591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:00606"}


id: PBO:0044749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 28","termid":"PBO:0044749"}


id: PBO:0063767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHEX antisense RNA 1","termid":"PBO:0063767"}


id: PBO:0069314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 572, pseudogene","termid":"PBO:0069314"}


id: PBO:0003416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex subunit Mit1","termid":"PBO:0003416"}


id: PBO:0046213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 6","termid":"PBO:0046213"}


id: GO:0043630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end of a non-coding RNA, occurring as part of the process of polyadenylation-dependent non-coding RNA catabolism.","definition_xrefs":["GOC:dph","GOC:jl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process (obsolete GO:0043630)","synonyms":[{"name":"ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process","type":"related"},{"name":"ncRNA polyadenylation involved in poly(A)-dependent ncRNA catabolic process","type":"related"}],"termid":"GO:0043630"}


id: PBO:0088714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter family","termid":"PBO:0088714"}


id: PBO:0047039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 104 member B","termid":"PBO:0047039"}


id: PBO:0048175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 2","termid":"PBO:0048175"}


id: GO:0080180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"2-methylguanosine metabolic process","termid":"GO:0080180"}


id: PBO:0011427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Slx9 (predicted)","termid":"PBO:0011427"}


id: PBO:0076927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 3","termid":"PBO:0076927"}


id: PBO:0067687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 4","termid":"PBO:0067687"}


id: PBO:0074355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 3","termid":"PBO:0074355"}


id: GO:1901883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-hydroxycoumarin.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin catabolic process","termid":"GO:0046226"},{"relation_name":"is_a","term_name":"4-hydroxycoumarin metabolic process","termid":"GO:1901882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"4-hydroxycoumarin catabolic process","synonyms":[{"name":"4-hydroxycoumarin breakdown","type":"exact"},{"name":"4-hydroxycoumarin catabolism","type":"exact"},{"name":"4-hydroxycoumarin degradation","type":"exact"}],"termid":"GO:1901883"}


id: PBO:0070449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 6","termid":"PBO:0070449"}


id: PR:O74440
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04293","PANTHER:PTHR10540:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.10","secondary_identifiers":["UniProtKB:O74440"],"synonyms":[{"name":"Spom972h-PSMD7","type":"exact"}],"termid":"PR:O74440"}


id: GO:1903967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16928959","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to micafungin","termid":"GO:1903967"}


id: GO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of the floral organs with reference to the central axis of the flower.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"establishment of plant organ orientation","termid":"GO:0090707"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of floral organ orientation","termid":"GO:0048559"}


id: GO:0044396
data:
  {"annotated_genes":["SJAG_02700","SJAG_04886","SJAG_03088","SJAG_01894","SJAG_04887","SJAG_03119","SJAG_01268","SJAG_04644","SJAG_04100","SJAG_03146","SJAG_01732","SJAG_00649","SJAG_02177","SJAG_01384","SJAG_04001","SJAG_02511","SJAG_03086","SJAG_02075","SJAG_02245","SJAG_04465","SJAG_04982","SJAG_01964","SJAG_00521","SJAG_04052","SJAG_02228","SJAG_03044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84480,91460,93893,94997,95058,101293,101311],"is_not":false,"summary":null,"term":"GO:0044396"},{"annotations":[99224,86027,111033,114958,86871,99415,101310,107186,106859,94088,103317,107830,90967,84376,108355,114605,95834,108332,96009,99471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000147"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane in cells, at sites of endocytosis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00521":null,"SJAG_00649":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02511":null,"SJAG_02700":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03146":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04100":null,"SJAG_04465":null,"SJAG_04644":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin cortical patch organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin cortical patch organisation","type":"exact"}],"termid":"GO:0044396","terms_by_termid":{"GO:0000147":null,"GO:0044396":null}}


id: PBO:0038564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABITRAM pseudogene 1","termid":"PBO:0038564"}


id: PBO:0042016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 73","termid":"PBO:0042016"}


id: GO:2000903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellooligosaccharide catabolic process","synonyms":[{"name":"cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000903"}


id: PBO:0038581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 1","termid":"PBO:0038581"}


id: PBO:0108967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIMAP1 family member D","termid":"PBO:0108967"}


id: PR:O14146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 51 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15954:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.10c","secondary_identifiers":["UniProtKB:O14146"],"synonyms":[{"name":"GARP complex subunit vps51 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC3G6.10c","type":"related"},{"name":"Spom972h-VPS51","type":"exact"}],"termid":"PR:O14146"}


id: PBO:0083811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding component of cleavage and polyadenylation factor; contains five zinc fingers; required for pre-mRNA 3'-end processing and polyadenylation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083811"}


id: PBO:0053115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 2","termid":"PBO:0053115"}


id: PR:Q10283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-hydroxy-3-methylglutaryl-coenzyme A reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10572:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-coenzyme A reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.09c","secondary_identifiers":["UniProtKB:Q10283"],"synonyms":[{"name":"HMG-CoA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC162.09c","type":"related"},{"name":"Spom972h-HMGCR","type":"exact"},{"name":"its12","type":"related"}],"termid":"PR:Q10283"}


id: GO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxyl group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"intramolecular hydroxytransferase activity","secondary_identifiers":["EC:5.4.4.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring hydroxy groups","type":"exact"}],"termid":"GO:0050486"}


id: FYPO:0006374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal proteolysis","termid":"FYPO:0005376"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein processing","synonyms":[{"name":"abnormal protein cleavage","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis","type":"exact"}],"termid":"FYPO:0006374"}


id: PBO:0040234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6","termid":"PBO:0040234"}


id: PBO:0076547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1 pseudogene 1","termid":"PBO:0076547"}


id: GO:0006744
data:
  {"annotated_genes":["SJAG_01866","SJAG_04223","SJAG_00721","SJAG_00459","SJAG_01820","SJAG_01043","SJAG_01668","SJAG_04000","SJAG_01063","SJAG_01865","SJAG_04568","SJAG_01434","SJAG_04642","SJAG_01672","SJAG_01911","SJAG_00933","SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83937,85835,87998,88003,94560,97178,99112,99398,104330,105447,105858,109916,111020,111366,112009,113228,115196,115197],"is_not":false,"summary":null,"term":"GO:0006744"},{"annotations":[85398],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[104331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"},{"annotations":[112010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901006"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone metabolic process","termid":"GO:0006743"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01063":null,"SJAG_01434":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_01911":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["MetaCyc:UBISYN-PWY"],"synonyms":[{"name":"coenzyme Q biosynthesis","type":"exact"},{"name":"coenzyme Q biosynthetic process","type":"exact"},{"name":"coenzyme Q10 biosynthesis","type":"narrow"},{"name":"coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"coenzyme Q6 biosynthesis","type":"narrow"},{"name":"coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"coenzyme Q8 biosynthesis","type":"narrow"},{"name":"coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"coenzyme Q9 biosynthesis","type":"narrow"},{"name":"coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"ubiquinone anabolism","type":"exact"},{"name":"ubiquinone biosynthesis","type":"exact"},{"name":"ubiquinone formation","type":"exact"},{"name":"ubiquinone synthesis","type":"exact"}],"termid":"GO:0006744","terms_by_termid":{"GO:0006744":null,"GO:0032194":null,"GO:1901006":null,"GO:1904775":null}}


id: PBO:0050580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 4","termid":"PBO:0050580"}


id: GO:1900953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 18-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 18-methylnonadec-1-ene metabolic process","synonyms":[{"name":"regulation of 18-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900953"}


id: FYPO:0002097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein kinase activity during cellular response to HU","type":"exact"},{"name":"reduced protein kinase activity during cellular response to HU","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002097"}


id: FYPO:0006874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex at an old growing cell tip is increased.","definition_xrefs":["PMID:17895368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to old growing cell tip","termid":"FYPO:0004362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to cell cortex of old growing cell tip","synonyms":[{"name":"increased protein localisation to cell cortex of old growing cell tip","type":"exact"},{"name":"increased protein localization to cell cortex of old growing cell end","type":"exact"},{"name":"increased protein localization to cell cortex of old growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell cortex of old growing cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to old growing cell tip cortex","type":"exact"}],"termid":"FYPO:0006874"}


id: GO:0031542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"positive regulation of anthocyanin metabolic process","termid":"GO:0031539"},{"relation_name":"is_a","term_name":"regulation of anthocyanin biosynthetic process","termid":"GO:0031540"},{"relation_name":"positively_regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anthocyanin biosynthetic process","synonyms":[{"name":"activation of anthocyanin biosynthetic process","type":"narrow"},{"name":"positive regulation of anthocyanin anabolism","type":"exact"},{"name":"positive regulation of anthocyanin biosynthesis","type":"exact"},{"name":"positive regulation of anthocyanin formation","type":"exact"},{"name":"positive regulation of anthocyanin synthesis","type":"exact"},{"name":"stimulation of anthocyanin biosynthetic process","type":"narrow"},{"name":"up regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"up-regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"upregulation of anthocyanin biosynthetic process","type":"exact"}],"termid":"GO:0031542"}


id: PBO:0061431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 4","termid":"PBO:0061431"}


id: PBO:0072821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 14","termid":"PBO:0072821"}


id: GO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-iditol + NAD+ = D-sorbose + NADH.","definition_xrefs":["MetaCyc:D-IDITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-iditol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12725"],"termid":"GO:0047824"}


id: GO:0005999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xylulose biosynthetic process","synonyms":[{"name":"xylulose anabolism","type":"exact"},{"name":"xylulose biosynthesis","type":"exact"},{"name":"xylulose formation","type":"exact"},{"name":"xylulose synthesis","type":"exact"}],"termid":"GO:0005999"}


id: PBO:0060993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal hypoxia inducible, placenta associated","termid":"PBO:0060993"}


id: PR:O74851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase adg3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.01c","synonyms":[{"name":"Spom972h-adg3","type":"exact"}],"termid":"PR:O74851"}


id: PBO:0061776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoconin 90","termid":"PBO:0061776"}


id: GO:0098835
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the presynaptic membrane that is part of the presynaptic endocytic zone - where synaptic vesicles are endocytosed and recycled following release.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"},{"relation_name":"part_of","term_name":"presynaptic endocytic zone","termid":"GO:0098833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"presynaptic endocytic zone membrane","termid":"GO:0098835"}


id: GO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy independent passage of toxins, sized less than 1000 Da, across a membrane towards the outside of the cell. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"},{"relation_name":"is_a","term_name":"toxin transmembrane transporter activity","termid":"GO:0019534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"toxin export channel activity","termid":"GO:0000269"}


id: PBO:0063661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 2","termid":"PBO:0063661"}


id: GO:0019786
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87797],"is_not":false,"summary":null,"term":"GO:0019786"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal L-amino acid-glycyl-phosphatidylethanolamide + H2O = [protein]-C-terminal L-amino acid-glycine + a 1,2-diacyl-sn-glycero-3-phosphoethanolamine. An example of this reaction is the removal of ATG8 from membranes to which it is covalently linked to a phosphatidylethanolamid via its terminal glycine residue.","definition_xrefs":["PMID:28330855","PMID:28901328","PMID:22240591","PMID:22652539","PMID:2882172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"protein-phosphatidylethanolamide deconjugating activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APG8-PE hydrolase","type":"related"},{"name":"APG8-specific protease activity","type":"narrow"},{"name":"ATG8-PE deconjugation activity","type":"narrow"},{"name":"ATG8-PE hydrolase activity","type":"narrow"},{"name":"Atg8-specific peptidase activity","type":"narrow"},{"name":"Atg8-specific protease activity","type":"exact"}],"termid":"GO:0019786","terms_by_termid":{"GO:0019786":null}}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: PBO:0079345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 29, pseudogene","termid":"PBO:0079345"}


id: GO:0039712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that activates or increases the frequency, rate or extent of host catalytic activity.","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host catalytic activity (obsolete GO:0039712)","synonyms":[{"name":"induction by virus of host enzyme activity","type":"exact"}],"termid":"GO:0039712"}


id: GO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["ISBN:0471522295","PMID:17446882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium development","termid":"GO:0070791"}


id: GO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The smaller of the two subunits of a plastid ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"part_of","term_name":"plastid ribosome","termid":"GO:0009547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plastid small ribosomal subunit","termid":"GO:0000312"}


id: GO:0044249
data:
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id: GO:1900468
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:8614637","PMID:8056324","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"regulation of phosphatidylserine anabolism","type":"exact"},{"name":"regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"regulation of phosphatidylserine formation","type":"exact"},{"name":"regulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900468"}


id: PBO:0057078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181a-1","termid":"PBO:0057078"}


id: PBO:0072741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A6","termid":"PBO:0072741"}


id: GO:2000460
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of eukaryotic cell surface binding (obsolete GO:2000460)","synonyms":[{"name":"regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000460"}


id: GO:0070060
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin nucleation process in which actin monomers combine in the absence of any existing actin filaments; elongation of the actin oligomer formed by nucleation leads to the formation of an unbranched filament.","definition_xrefs":["GOC:mah","PMID:17477841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"'de novo' actin filament nucleation","synonyms":[{"name":"formin-mediated actin filament nucleation","type":"narrow"},{"name":"unbranched actin filament nucleation","type":"related"}],"termid":"GO:0070060"}


id: GO:0034125
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0034124"},{"relation_name":"negatively_regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"negative regulation of MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034125"}


id: GO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + O2 = H2O2 + H+ + oxalate.","definition_xrefs":["RHEA:14837","EC:1.2.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyoxylate oxidase activity","secondary_identifiers":["Reactome:R-HSA-389862","MetaCyc:GLYOXYLATE-OXIDASE-RXN","KEGG_REACTION:R00466"],"synonyms":[{"name":"glyoxylate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047969"}


id: PBO:0091376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 2","termid":"PBO:0091376"}


id: PBO:0077795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin 1A interacting protein 1","termid":"PBO:0077795"}


id: PBO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific GPI anchored protein family 1","termid":"PBO:0003014"}


id: PBO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Alg11","termid":"PBO:0005013"}


id: PBO:0073719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src like adaptor","termid":"PBO:0073719"}


id: PBO:0031379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_kinetochore_morphology","termid":"PBO:0031379"}


id: GO:0007339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm-egg recognition","termid":"GO:0035036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"binding of sperm to zona pellucida","synonyms":[{"name":"ZPG binding","type":"related"}],"termid":"GO:0007339"}


id: PBO:0089269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPCC569.09  ortholog, syntenic position","termid":"PBO:0089269"}


id: GO:0052695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an organic chemical by the conjugation of glucuronic acid. The substances resulting from glucuronidation are known as glucuronosides (or glucuronides) and are often much more water-soluble than the non-glucuronic acid-containing precursor.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cellular glucuronidation","synonyms":[{"name":"cellular glucuronide biosynthesis","type":"exact"},{"name":"cellular glucuronide biosynthetic process","type":"exact"},{"name":"cellular glucuronoside biosynthesis","type":"exact"},{"name":"cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:0052695"}


id: SO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA fragment generated by sonication. Sonication is a technique used to sheer DNA into smaller fragments.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonicate_fragment","synonyms":[{"name":"sonicate fragment","type":"exact"}],"termid":"SO:0001253"}


id: PBO:0052851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-7","termid":"PBO:0052851"}


id: PBO:0078704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 6-1","termid":"PBO:0078704"}


id: GO:0090111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of COPII vesicle uncoating, the process in which COPII vesicle coat proteins are disassembled, and released.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"COPII vesicle uncoating","termid":"GO:0090112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of COPII vesicle uncoating","termid":"GO:0090111"}


id: PBO:0028514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028514"}


id: PBO:0005831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP+] Tyr1 (predicted)","termid":"PBO:0005831"}


id: PBO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-I ortholog Mis6","termid":"PBO:0025431"}


id: GO:0007193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the inhibition of adenylyl cyclase activity and a subsequent decrease in the intracellular concentration of cyclic AMP (cAMP).","definition_xrefs":["GOC:mah","GOC:dph","GOC:signaling","GOC:tb","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","termid":"GO:0007188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","synonyms":[{"name":"G protein signaling, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"G protein signaling, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"G protein signalling, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"G protein signalling, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"G-protein signaling, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"G-protein signaling, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"G-protein signalling, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"G-protein signalling, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"GPCR signaling pathway via inhibition of adenylate cyclase activity","type":"exact"},{"name":"adenylate cyclase-inhibiting GPCR signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by G-protein signaling pathway","type":"related"}],"termid":"GO:0007193"}


id: PBO:0034048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_skeleton","termid":"PBO:0034048"}


id: PBO:0040122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 9","termid":"PBO:0040122"}


id: FYPO:0005194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation during mitotic S phase","synonyms":[{"name":"decreased protein breakdown during mitotic S phase","type":"exact"},{"name":"decreased protein catabolic process during mitotic S phase","type":"exact"},{"name":"decreased protein catabolism during mitotic S phase","type":"exact"},{"name":"decreased protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic S phase","type":"exact"}],"termid":"FYPO:0005194"}


id: PBO:0085111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear ubiquitin protein ligase binding protein; may regulate utilization of nonfermentable carbon sources and endocytosis of plasma membrane proteins; overproduction suppresses chs5 spa2 lethality at high temp; ubiquitinated by Rsp5p, deubiquitinated by Ubp2p; CSR2 has a paralog, ECM21, that arose from the whole genome duplication","termid":"PBO:0085111"}


id: PBO:0087718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation","termid":"PBO:0087718"}


id: PBO:0068930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 173, pseudogene","termid":"PBO:0068930"}


id: PBO:0024863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf1 (predicted)","termid":"PBO:0024863"}


id: GO:0045276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the respiratory chain located in the plasma membrane, containing about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex III","termid":"GO:0045275"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex III","secondary_identifiers":["GO:0045286"],"synonyms":[{"name":"plasma membrane coenzyme Q-cytochrome c oxidoreductase complex","type":"exact"},{"name":"plasma membrane coenzyme Q-cytochrome c reductase complex","type":"exact"},{"name":"plasma membrane cytochrome bc1 complex","type":"exact"},{"name":"plasma membrane ubiquinol-cytochrome-c reductase complex","type":"exact"},{"name":"respiratory chain complex III","type":"broad"},{"name":"ubiquinol-cytochrome c oxidoreductase complex","type":"broad"},{"name":"ubiquinol-cytochrome-c reductase complex","type":"broad"}],"termid":"GO:0045276"}


id: PBO:0070202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 127 pseudogene","termid":"PBO:0070202"}


id: FYPO:0004588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitosis following normal mitosis","synonyms":[{"name":"abnormal mitosis following normal mitosis and interphase","type":"exact"},{"name":"abnormal mitosis following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal mitosis following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal mitotic nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear division following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004588"}


id: PBO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase Uge1","termid":"PBO:0004090"}


id: GO:0017107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The binding activity of a molecule that brings together an anion exchanger and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"gene_count":0,"genotype_count":0,"name":"obsolete anion exchanger adaptor activity (obsolete GO:0017107)","termid":"GO:0017107"}


id: PR:Q9Y7N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NARFL that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11615:SF31","PRO:DNx","OMA:SCHPO04806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor NAR1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.10c","secondary_identifiers":["UniProtKB:Q9Y7N7"],"synonyms":[{"name":"Spom972h-NARFL","type":"exact"},{"name":"nuclear architecture-related protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N7"}


id: FYPO:0007065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 20S rRNA precursor measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah","PMID:29641590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"20S rRNA precursor absent from cell","synonyms":[{"name":"20S rRNA precursor absent from cell during mitotic cell cycle","type":"related"},{"name":"20S rRNA precursor absent from cell during vegetative growth","type":"exact"},{"name":"20S rRNA precursor transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable 20S rRNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0007065"}


id: GO:1901799
data:
  {"annotated_genes":["SJAG_00052","SJAG_03048","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[103106,86602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteasomal protein catabolic process.","definition_xrefs":["PMID:21669198","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"negatively_regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"down-regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"downregulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"inhibition of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasome-mediated protein catabolic process","type":"exact"},{"name":"inhibition of proteasome-mediated protein catabolism","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:1901799","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: GO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: transferrin[Fe2+]2 + NAD+ = transferrin[Fe3+]2 + NADH.","definition_xrefs":["RHEA:13841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"diferric-transferrin reductase activity","secondary_identifiers":["MetaCyc:DIFFERIC-TRANSFERRIN-REDUCTASE-RXN","EC:1.16.1.2"],"synonyms":[{"name":"NADH diferric transferrin reductase activity","type":"related"},{"name":"diferric transferrin reductase activity","type":"related"},{"name":"transferrin reductase activity","type":"related"},{"name":"transferrin[Fe(II)]2:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047852"}


id: GO:0050802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of the circadian sleep/wake cycle where the organism is asleep.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"is_a","term_name":"sleep","termid":"GO:0030431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}


id: PBO:0085042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential hydrolase involved in mRNA decapping; activates Xrn1p; may function in a feedback mechanism to regulate deadenylation, contains pyrophosphatase activity and a HIT (histidine triad) motif; acts as inhibitor of neutral trehalase Nth1p; required for growth on glycerol medium; protein abundance increases in response to DNA replication stress; DCS1 has a paralog, DCS2, that arose from the whole genome duplication","termid":"PBO:0085042"}


id: PBO:0058292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4666b","termid":"PBO:0058292"}


id: SO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter whereby activity is induced by the presence or absence of biotic or abiotic factors.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible_promoter","synonyms":[{"name":"inducible promoter","type":"exact"}],"termid":"SO:0002051"}


id: GO:0000164
data:
  {"annotated_genes":["SJAG_02536","SJAG_04968","SJAG_00534","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89147,108121,112733],"is_not":false,"summary":null,"term":"GO:0000164"},{"annotations":[108122,93868,112734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity.","definition_xrefs":["GOC:ssd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00534":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"protein phosphatase type 1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000164","terms_by_termid":{"GO:0000164":null,"GO:0072357":null}}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: PBO:0079817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up-regulated in colorectal cancer liver metastasis","termid":"PBO:0079817"}


id: PBO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cardiolipin-specific phospholipase Cld1","termid":"PBO:0090635"}


id: FYPO:0002093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion","synonyms":[{"name":"decreased sister chromatid cohesion during meiosis","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0002093"}


id: PBO:0068463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 40, pseudogene","termid":"PBO:0068463"}


id: PBO:0075940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain 3","termid":"PBO:0075940"}


id: MOD:01014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate/sulphate adduct of proteins","termid":"MOD:01014"}


id: PBO:0085859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YLR108C is not an esssential gene; protein abundance increases in response to DNA replication stress; YLR108C has a paralog, YDR132C, that arose from the whole genome duplication","termid":"PBO:0085859"}


id: PATO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved asymmetrically.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrically curved","termid":"PATO:0001848"}


id: GO:0070242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a thymocyte, an immature T cell located in the thymus.","definition_xrefs":["CL:0000893","GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymocyte apoptotic process","synonyms":[{"name":"immature T cell apoptosis","type":"related"},{"name":"thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070242"}


id: GO:0018835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alkylphosphonic acid = R-CH3 + phosphate. Substrates include aminomethylphosphonic acid (AMPA) (forms methylamine), dimethylphosphinic acid (forms methylphosphonic acid), glyphosate (forms sarcosine) and methylphosphonic acid (forms phosphate).","definition_xrefs":["PMID:3804975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"carbon phosphorus lyase activity","secondary_identifiers":["EC:4.7.1.-","GO:0009456"],"termid":"GO:0018835"}


id: PBO:0066088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 2","termid":"PBO:0066088"}


id: GO:2000854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"is_a","term_name":"regulation of corticosterone secretion","termid":"GO:2000852"},{"relation_name":"positively_regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of corticosterone secretion","termid":"GO:2000854"}


id: GO:1903150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any calcium ion transmembrane transporter activity that is involved in calcium ion import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium ion transmembrane transporter activity involved in calcium ion import into cell (obsolete GO:1903150)","synonyms":[{"name":"calcium ion transmembrane transporter activity involved in calcium ion import into cell","type":"exact"},{"name":"calcium ion transmembrane transporter activity involved in calcium ion uptake into cell","type":"exact"}],"termid":"GO:1903150"}


id: GO:0097138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAD-BCL-2 complex","termid":"GO:0097138"}


id: PBO:0083121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol kinase; catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis; required for viability and for normal rates of lipid intermediate synthesis and protein N-glycosylation","termid":"PBO:0083121"}


id: GO:0140323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(in) + solute(out) = anion(out) + solute(in).","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:monoatomic anion antiporter activity (obsolete GO:0140323)","synonyms":[{"name":"solute:anion antiporter activity","type":"exact"}],"termid":"GO:0140323"}


id: GO:0043476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation","synonyms":[{"name":"pigment accumulation in response to external stimulus","type":"exact"}],"termid":"GO:0043476"}


id: PBO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin involved in translation initiation (predicted)","termid":"PBO:0005085"}


id: GO:0071596
data:
  {"annotated_genes":["SJAG_01253","SJAG_02705","SJAG_04619"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85545,93118,102048],"is_not":false,"summary":null,"term":"GO:0071596"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the N-end rule pathway. In the N-end rule pathway, destabilizing N-terminal residues (N-degrons) in substrates are recognized by E3 ligases (N-recognins), whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation.","definition_xrefs":["PMID:19246002","GOC:rb","PMID:9112437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01253":null,"SJAG_02705":null,"SJAG_04619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the N-end rule pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein breakdown via the N-end rule pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolism via the N-end rule pathway","type":"exact"},{"name":"ubiquitin-dependent protein degradation via the N-end rule pathway","type":"exact"}],"termid":"GO:0071596","terms_by_termid":{"GO:0071596":null}}


id: MOD:00745
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a selenium atom or a cluster containing selenium for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenium containing residue","synonyms":[{"name":"SeRes","type":"exact"}],"termid":"MOD:00745"}


id: MOD:00379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine microcin E492 siderophore ester.","definition_xrefs":["PubMed:15102848","Unimod:448#C-term","RESID:AA0374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine microcin E492 siderophore ester","synonyms":[{"name":"L-serine microcin E492 siderophore ester","type":"exact"},{"name":"MOD_RES Serine microcin E492 siderophore ester","type":"exact"},{"name":"Microcin","type":"related"},{"name":"N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine","type":"exact"},{"name":"microcin E492 siderophore ester from serine","type":"related"}],"termid":"MOD:00379"}


id: GO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thread-like connection joining two regions of ectopically paired polytene chromosomes.","definition_xrefs":["ISBN:0120649012","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome ectopic fiber","synonyms":[{"name":"polytene chromosome ectopic fibre","type":"exact"}],"termid":"GO:0005706"}


id: PBO:0081407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 254","termid":"PBO:0081407"}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:22704558","PMID:22759634","PMID:22888405","PMID:22705370","PMID:21078962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: GO:0021743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypoglossal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nucleus development","termid":"GO:0021743"}


id: PBO:0079989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 27","termid":"PBO:0079989"}


id: PBO:0082376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor of the yAP-1 family; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; mediates pleiotropic drug resistance and salt tolerance; nuclearly localized under oxidative stress and sequestered in the cytoplasm by Lot6p under reducing conditions; CIN5 has a paralog, YAP6, that arose from the whole genome duplication","termid":"PBO:0082376"}


id: GO:0062213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peroxynitrite = nitrate.","definition_xrefs":["PMID:30524950","RHEA:63116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peroxynitrite isomerase activity","termid":"GO:0062213"}


id: GO:1905364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["PMID:26911690","GOC:bc","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of endosomal vesicle fusion","synonyms":[{"name":"regulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905364"}


id: GO:0070651
data:
  {"annotated_genes":["SJAG_04084","SJAG_01191","SJAG_01818","SJAG_04006","SJAG_03179","SJAG_04818","SJAG_04824","SJAG_04153","SJAG_04283","SJAG_00854","SJAG_04321","SJAG_01521","SJAG_03745","SJAG_03507","SJAG_03728"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88420,89243,92089,93420,93665,98236,100550,101407,102615,103614,103709,111585,112032,112180,114401],"is_not":false,"summary":null,"term":"GO:0070651"}]},"cv_name":"biological_process","definition":"An rRNA catabolic process that results in the targeted detection and degradation of aberrant rRNAs contained within translationally defective ribosomes, thereby acting as a quality-control system.","definition_xrefs":["PMID:19390089","GOC:rn","GOC:mah","PMID:17188037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03507":null,"SJAG_03728":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonfunctional rRNA decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NRD","type":"related"}],"termid":"GO:0070651","terms_by_termid":{"GO:0070651":null}}


id: GO:0004449
data:
  {"annotated_genes":["SJAG_00502"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92531],"is_not":false,"summary":null,"term":"GO:0004449"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH.","definition_xrefs":["RHEA:23632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70967","MetaCyc:ISOCITRATE-DEHYDROGENASE-NAD+-RXN","EC:1.1.1.41"],"synonyms":[{"name":"NAD dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitric dehydrogenase activity","type":"exact"},{"name":"NAD-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NAD) activity","type":"exact"},{"name":"isocitrate:NAD+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"nicotinamide adenine dinucleotide isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004449","terms_by_termid":{"GO:0004449":null}}


id: PBO:0085608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cystine transport; localizes to the vacuole, plasma membrane and endosome; similarity to human cystinosin, a H(+)-driven transporter involved in L-cystine export from lysosomes and implicated in the disease cystinosis; contains seven transmembrane domains; mutation is functionally complemented by human CTNS","termid":"PBO:0085608"}


id: PBO:0091088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane insertase Cox18","termid":"PBO:0091088"}


id: PBO:0045877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 1","termid":"PBO:0045877"}


id: PBO:0084829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for outer membrane protein import; involved in import of the subset of proteins with multiple alpha-helical transmembrane segments, including Ugo1p, Tom20p, and Fzo1p; component of a large protein complex in the outer membrane that includes Mim1p and functions as cation-selective channel for translocation of positively charged precursor segments; not essential in W303 strain background","termid":"PBO:0084829"}


id: PBO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase A","termid":"PBO:0048774"}


id: PBO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam12","termid":"PBO:0017046"}


id: PBO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B pseudogene 1","termid":"PBO:0043033"}


id: GO:1904432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferrous iron binding.","definition_xrefs":["PMID:18353247","GO_REF:0000059","GOC:kom","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ferrous iron binding","termid":"GO:1904432"}


id: PBO:0066737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 34","termid":"PBO:0066737"}


id: PBO:0067030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 43, pseudogene","termid":"PBO:0067030"}


id: PBO:0050475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A3","termid":"PBO:0050475"}


id: PR:Q9UTB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PHD finger-like domain-containing protein 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13120:SF0","OMA:SCHPO01040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ini1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.02c","secondary_identifiers":["UniProtKB:Q9UTB8"],"synonyms":[{"name":"Spom972h-PHF5A","type":"exact"}],"termid":"PR:Q9UTB8"}


id: PBO:0043124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 2","termid":"PBO:0043124"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: GO:0060901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate, frequency or extent of the hair cycle.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hair cycle by canonical Wnt signaling pathway (obsolete GO:0060901)","synonyms":[{"name":"regulation of hair cycle by Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0060901"}


id: PBO:0081286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 70 pseudogene 1","termid":"PBO:0081286"}


id: PBO:0017814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter (predicted)","termid":"PBO:0017814"}


id: GO:0070897
data:
  {"annotated_genes":["SJAG_00692","SJAG_03120","SJAG_02813","SJAG_04274","SJAG_00766","SJAG_01707","SJAG_03095","SJAG_03285","SJAG_00741","SJAG_03900","SJAG_02174","SJAG_01475","SJAG_03956","SJAG_01808","SJAG_03007","SJAG_02458","SJAG_01523","SJAG_04654","SJAG_02691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111337],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[91920,105322,63326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[66504,110948,83612,64274,84825,85487,84567,92208,104663,86110,111529,113469,90319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[99229,112358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on gene promoter through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC). The PIC engages the RNA polymerase on its DNA template strand and sparks polymerization of the first few RNA nucleotides.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_00741":null,"SJAG_00766":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01707":null,"SJAG_01808":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02691":null,"SJAG_02813":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_03956":null,"SJAG_04274":null,"SJAG_04654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0008150","GO:0065003","GO:0006351"],"is_obsolete":false,"name":"transcription preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001126"],"synonyms":[{"name":"DNA-dependent transcriptional preinitiation complex assembly","type":"exact"},{"name":"DNA-templated transcriptional preinitiation complex assembly","type":"exact"},{"name":"bacterial-type RNA polymerase preinitiation complex assembly","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription PIC formation","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional preinitiation complex formation","type":"narrow"},{"name":"transcription PIC biosynthesis","type":"broad"},{"name":"transcription PIC formation","type":"broad"},{"name":"transcriptional preinitiation complex formation","type":"broad"}],"termid":"GO:0070897","terms_by_termid":{"GO:0001188":null,"GO:0045899":null,"GO:0051123":null,"GO:0070898":null}}


id: GO:1904877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GOC:BHF_telomere","GOC:rl","GOC:BHF","PMID:17389648","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA ligation","termid":"GO:0051106"},{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"regulation of DNA ligase activity","termid":"GO:1904875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA ligase activity","synonyms":[{"name":"activation of DNA ligase activity","type":"narrow"},{"name":"up regulation of DNA ligase activity","type":"exact"},{"name":"up-regulation of DNA ligase activity","type":"exact"},{"name":"upregulation of DNA ligase activity","type":"exact"}],"termid":"GO:1904877"}


id: GO:0072066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the prebend segment over time, from its formation to the mature structure. The prebend segment is a part of the descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"descending thin limb development","termid":"GO:0072022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prebend segment development","termid":"GO:0072066"}


id: PBO:0005575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf15","termid":"PBO:0005575"}


id: PBO:0004393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.3","termid":"PBO:0004393"}


id: PBO:0046032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit beta","termid":"PBO:0046032"}


id: PBO:0067745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 44","termid":"PBO:0067745"}


id: GO:0033641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to pH (obsolete GO:0033641)","termid":"GO:0033641"}


id: GO:0102089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + O2 = dehydroscoulerine + hydrogen peroxide + H+.","definition_xrefs":["GOC:pz","EC:1.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dehydroscoulerine synthase activity","secondary_identifiers":["MetaCyc:RXN-10888"],"termid":"GO:0102089"}


id: PBO:0005104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar SNARE Vam7 (predicted)","termid":"PBO:0005104"}


id: PBO:0080666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 11","termid":"PBO:0080666"}


id: GO:0072038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of mesenchymal stem cells that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"}


id: PBO:0068417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renalase, FAD dependent amine oxidase","termid":"PBO:0068417"}


id: PBO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 13","termid":"PBO:0072214"}


id: SO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from plasmid sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"plasmid_location","termid":"SO:0000749"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_gene","synonyms":[{"name":"plasmid gene","type":"exact"}],"termid":"SO:0000098"}


id: PBO:0080845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 9","termid":"PBO:0080845"}


id: PR:O94329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein PSF2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02775","PANTHER:PTHR12772:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein psf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.13c","secondary_identifiers":["UniProtKB:O94329"],"synonyms":[{"name":"Spom972h-GINS2","type":"exact"}],"termid":"PR:O94329"}


id: GO:0046450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dethiobiotin, a derivative of biotin formed by replacing the sulfur atom by two hydrogen atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dethiobiotin metabolic process","synonyms":[{"name":"desthiobiotin metabolic process","type":"exact"},{"name":"desthiobiotin metabolism","type":"exact"},{"name":"dethiobiotin metabolism","type":"exact"}],"termid":"GO:0046450"}


id: PBO:0062378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily C member 2","termid":"PBO:0062378"}


id: PBO:0039573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1A","termid":"PBO:0039573"}


id: GO:1900939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"negatively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900939"}


id: GO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)](n) + 2n UDP.","definition_xrefs":["EC:2.4.1.212","MetaCyc:2.4.1.212-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"hyaluronan synthase activity","secondary_identifiers":["Reactome:R-HSA-2160851","RHEA:12528"],"synonyms":[{"name":"HAS activity","type":"broad"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1,3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1,4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1->4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"seHAS","type":"related"},{"name":"spHAS","type":"related"}],"termid":"GO:0050501"}


id: GO:0018675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-limonene + NADPH + H+ + O2 = (-)-trans-carveol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-limonene 6-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0713","MetaCyc:--LIMONENE-6-MONOOXYGENASE-RXN","RHEA:17945"],"synonyms":[{"name":"(-)-limonene 6-hydroxylase activity","type":"related"},{"name":"(-)-limonene 6-monooxygenase activity","type":"exact"},{"name":"(-)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating) activity","type":"related"},{"name":"(S)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"limonene 6-hydroxylase activity","type":"exact"}],"termid":"GO:0018675"}


id: PBO:0075332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 1","termid":"PBO:0075332"}


id: PBO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 8","termid":"PBO:0050306"}


id: PBO:0056003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056003"}


id: PBO:0048678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase pseudogene 1","termid":"PBO:0048678"}


id: FYPO:0003998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000293","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000294","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"increased DNA primase activity","termid":"FYPO:0003998"}


id: PBO:0038401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property_(not_for_use_in_curation)","termid":"PBO:0038401"}


id: PBO:0084934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor, component of U4/U6.U5 tri-snRNP; interacts genetically and physically with Prp38p; relocalizes to the cytosol in response to hypoxia; temperature-sensitive phenotype of prp38-1 mutant can be suppressed by human homolog of SPP381, MFAP1","termid":"PBO:0084934"}


id: PBO:0049555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 17","termid":"PBO:0049555"}


id: PBO:0089450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane pyridoxal family transmembrane transporter","termid":"PBO:0089450"}


id: PBO:0017760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly protein Mug56 (predicted)","termid":"PBO:0017760"}


id: GO:0102257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-palmitoyl-2-linoleoyl-phosphatidylcholine + H2O = 1-linoleoyl-sn-glycero-3-phosphocholine + hexadecanoate + H+.","definition_xrefs":["EC:3.1.1.32","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"1-16:0-2-18:2-phosphatidylcholine sn-1 acylhydrolase activity","secondary_identifiers":["MetaCyc:RXN-12430"],"termid":"GO:0102257"}


id: GO:0006664
data:
  {"annotated_genes":["SJAG_00846","SJAG_00068","SJAG_03801","SJAG_05327","SJAG_04924","SJAG_01570","SJAG_02523","SJAG_03506","SJAG_01860","SJAG_05311","SJAG_05278","SJAG_03066","SJAG_02804","SJAG_03115","SJAG_04878","SJAG_00295","SJAG_06383","SJAG_02168","SJAG_00831","SJAG_04119","SJAG_02776","SJAG_02913","SJAG_01416","SJAG_02488","SJAG_04975","SJAG_06425","SJAG_04165","SJAG_03878","SJAG_03292","SJAG_03953","SJAG_03672","SJAG_02903","SJAG_04913","SJAG_05219","SJAG_04881","SJAG_04337","SJAG_01227"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83666,99870,88403,87573,110110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[102877,90684,84873,94827,99201,89256,87405,113363,103712,96376,92597,95031,85752,94276,104752,85136,107763,108523,99933,97761,110937,89166,106098,89709,111362,112287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[96444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006505"},{"annotations":[86931,91426,91910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[87979,108703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycolipids, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar group acylated by one or more fatty acids and the glycerol group may be absent.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"liposaccharide metabolic process","termid":"GO:1903509"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycolipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycolipid metabolism","type":"exact"}],"termid":"GO:0006664","terms_by_termid":{"GO:0006505":null,"GO:0006506":null,"GO:0006675":null,"GO:0016255":null,"GO:0051999":null}}


id: GO:1902686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of a programmed cell death process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:pg","GOC:TermGenie","PMID:20151314","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization involved in programmed cell death","synonyms":[{"name":"MPT involved in PCD","type":"narrow"},{"name":"MPT involved in caspase-independent apoptosis","type":"related"},{"name":"MPT involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in programmed cell death","type":"narrow"},{"name":"MPT involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeabilization involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in regulated cell death","type":"related"},{"name":"mitochondrial outer membrane permeabilization during programmed cell death","type":"exact"},{"name":"mitochondrial permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrion outer membrane permeabilization involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in PCD","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in regulated cell death","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in PCD","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in regulated cell death","type":"related"}],"termid":"GO:1902686"}


id: PBO:0050261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 39","termid":"PBO:0050261"}


id: GO:0004628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-independent cytosolic phospholipase A2 activity (obsolete GO:0004628)","synonyms":[{"name":"calcium-independent cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004628"}


id: GO:2001105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltoheptaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"maltoheptaose transport","termid":"GO:2001105"}


id: PBO:0039871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 29","termid":"PBO:0039871"}


id: PBO:0042158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 19","termid":"PBO:0042158"}


id: SO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_repeat is a single copy of an internal sequence repetition.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_repeat","secondary_identifiers":["BS:00070"],"synonyms":[{"name":"polypeptide repeat","type":"exact"},{"name":"repeat","type":"related"}],"termid":"SO:0001068"}


id: GO:0036360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sorocarp stalk is generated and organized. The sorocarp stalk is a tubular structure that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["DDANAT:0000068","PMID:22902739","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"sorocarp stalk development","termid":"GO:0031150"},{"relation_name":"part_of","term_name":"sorocarp morphogenesis","termid":"GO:0031288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk morphogenesis","synonyms":[{"name":"fruiting body stalk morphogenesis","type":"broad"}],"termid":"GO:0036360"}


id: PATO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000466 none (obsolete PATO:0000466)","termid":"PATO:0000466"}


id: PBO:0044266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 5","termid":"PBO:0044266"}


id: PBO:0051321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-1 (pseudogene)","termid":"PBO:0051321"}


id: FYPO:0000986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a higher-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000986)","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000986"}


id: PBO:0038843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 12","termid":"PBO:0038843"}


id: GO:0044639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, lectin pathway in another organism (obsolete GO:0044639)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, lectin pathway in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044639"}


id: GO:1901559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ribavirin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ribavirin","termid":"GO:1901559"}


id: PBO:0000877
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of TIM23 translocase","termid":"PBO:0000877"}


id: PBO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Dim1","termid":"PBO:0005309"}


id: FYPO:0002655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal, and the vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"has_part","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"},{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"is_a","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"enlarged exocytic vesicles present in increased numbers","synonyms":[{"name":"accumulation of enlarged exocytic vesicles","type":"related"},{"name":"additional enlarged exocytic vesicles present","type":"exact"},{"name":"enlarged exocytic vesicles present in greater numbers","type":"exact"},{"name":"enlarged exocytic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"enlarged exocytotic vesicles present in increased numbers","type":"exact"},{"name":"enlarged post-Golgi secretory vesicles present in increased numbers","type":"related"},{"name":"extra enlarged exocytic vesicles","type":"exact"}],"termid":"FYPO:0002655"}


id: PBO:0086187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine phosphatase; regulates Hsp90 chaperone by affecting its ATPase and cochaperone binding activities; has similarity to human phosphatase PP5; present in both the nucleus and cytoplasm; expressed during logarithmic growth","termid":"PBO:0086187"}


id: FYPO:0002218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with normal morphology (i.e. size, shape, and structure) that do not septate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, normal unseptated germ tube morphology (obsolete FYPO:0002218)","synonyms":[{"name":"inviable germinated spore population, normal unseptated germ tube morphology","type":"exact"}],"termid":"FYPO:0002218"}


id: GO:0071744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgE immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgE immunoglobulin complex","termid":"GO:0071742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"IgE B cell receptor complex","synonyms":[{"name":"membrane-bound IgE","type":"exact"},{"name":"surface IgE","type":"exact"}],"termid":"GO:0071744"}


id: PBO:0058719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6847","termid":"PBO:0058719"}


id: PBO:0084654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor orotate phosphoribosyltransferase (OPRTase) isozyme; catalyzes the fifth enzymatic step in the de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate; URA10 has a paralog, URA5, that arose from the whole genome duplication","termid":"PBO:0084654"}


id: FYECO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to stationary phase.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase","termid":"FYECO:0000123"}


id: PR:Q9P7S6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf30 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.07c","synonyms":[{"name":"SWI/SNF complex subunit snf30 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf30","type":"exact"}],"termid":"PR:Q9P7S6"}


id: PR:P55877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P55877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.07","synonyms":[{"name":"Spom972h-tif11","type":"exact"},{"name":"eIF-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 4C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P55877"}


id: GO:0070390
data:
  {"annotated_genes":["SJAG_04347","SJAG_00298","SJAG_04656","SJAG_04472","SJAG_00641"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68865,98121,107914,113513,114132],"is_not":false,"summary":null,"term":"GO:0070390"}]},"cv_name":"cellular_component","definition":"A protein complex that couples SAGA-dependent gene expression to mRNA export at the inner side of the nuclear pore complex (NPC). The TREX-2 complex is tethered to the inner side of the NPC via the nucleoporins Nup1 and Nup60; in S. cerevisiae it contains Sac3p, Thp1p, Sem1, Sus1p and Cdc31p.","definition_xrefs":["GOC:dgf","PMID:28334829","GOC:mah","PMID:19289793","PMID:17786152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_00641":null,"SJAG_04347":null,"SJAG_04472":null,"SJAG_04656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"transcription export complex 2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Sac3-Thp1-Sus1-Sem1-Cdc31 complex","type":"exact"},{"name":"TREX-2 complex","type":"exact"}],"termid":"GO:0070390","terms_by_termid":{"GO:0070390":null}}


id: SO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An abundant small nuclear RNA that, together with associated cellular proteins, regulates the activity of the positive transcription elongation factor b (P-TEFb). It is often described in literature as similar to a snRNA, except of longer length.","definition_xrefs":["PMID:21853533","PMID:27369380","PMID:19246988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK","synonyms":[{"name":"7SK RNA","type":"exact"},{"name":"RNA 7SK","type":"exact"}],"termid":"SO:0002340"}


id: GO:0019062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.","definition_xrefs":["VZ:956","GOC:jl","UniProtKB-KW:KW-1161","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion attachment to host cell","synonyms":[{"name":"viral absorption","type":"exact"},{"name":"viral attachment to host cell","type":"related"},{"name":"virion attachment to host cell surface receptor","type":"narrow"}],"termid":"GO:0019062"}


id: GO:1905316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a superior endocardial cushion is generated and organized.","definition_xrefs":["PMID:17050629","GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior endocardial cushion morphogenesis","synonyms":[{"name":"dorsal endocardial cushion morphogenesis","type":"exact"}],"termid":"GO:1905316"}


id: GO:0072005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a kidney is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of animal organ identity","termid":"GO:0048496"},{"relation_name":"part_of","term_name":"kidney rudiment formation","termid":"GO:0072003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of kidney identity","synonyms":[{"name":"maintenance of kidney anlage identity","type":"related"}],"termid":"GO:0072005"}


id: GO:2000640
data:
  {"annotated_genes":["SJAG_03568","SJAG_02682","SJAG_01632","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89861,89862,89863,109603,109604,109605,113128],"is_not":false,"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the SREBP signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of SREBP signaling pathway","termid":"GO:2000638"},{"relation_name":"positively_regulates","term_name":"SREBP signaling pathway","termid":"GO:0032933"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01150":null,"SJAG_01632":null,"SJAG_02682":null,"SJAG_03568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of SREBP-mediated signaling pathway","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway","type":"exact"}],"termid":"GO:2000640","terms_by_termid":{"GO:2000640":null}}


id: GO:0160119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process that is induced by intracellular copper accumulation.","definition_xrefs":["PMID:35298263","PMID:35354936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuproptosis","termid":"GO:0160119"}


id: PBO:0066275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member J","termid":"PBO:0066275"}


id: PBO:0067826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 128","termid":"PBO:0067826"}


id: PBO:0048143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD6 antisense RNA 1","termid":"PBO:0048143"}


id: PBO:0067261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 335, pseudogene","termid":"PBO:0067261"}


id: GO:0098744
data:
  {"annotated_genes":["SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87400],"is_not":false,"summary":null,"term":"GO:0098744"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of 1-phosphatidylinositol 4-kinase.","definition_xrefs":["PMID:21288895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098744","terms_by_termid":{"GO:0098744":null}}


id: PBO:0069748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1029, pseudogene","termid":"PBO:0069748"}


id: PBO:0074816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 16","termid":"PBO:0074816"}


id: GO:0032275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of luteinizing hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"luteinizing hormone secretion","termid":"GO:0032275"}


id: PBO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two MCB clusters regulate cell-cycle dependent cdc22+ transcription","termid":"PBO:0018254"}


id: PBO:0036386
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Saitoella complicata DPS1","termid":"PBO:0036386"}


id: PBO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 3","termid":"PBO:0043913"}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: PR:000027523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the yeast SLD2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","PMID:11937031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication and checkpoint protein 1","type":"exact"},{"name":"DRC1","type":"related"},{"name":"SLD2","type":"exact"}],"termid":"PR:000027523"}


id: PBO:0081513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 419","termid":"PBO:0081513"}


id: GO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol kinase activity (obsolete GO:0004428)","synonyms":[{"name":"inositol or phosphatidylinositol kinase activity","type":"exact"},{"name":"inositol/phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0004428"}


id: PBO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteome hyperlink","termid":"PBO:0001051"}


id: GO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of trichome initiation; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of trichome initiation (sensu Magnoliophyta) (obsolete GO:0048517)","synonyms":[{"name":"positive regulation of trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048517"}


id: PBO:0072723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING1 and YY1 binding protein","termid":"PBO:0072723"}


id: PBO:0064985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 2","termid":"PBO:0064985"}


id: PBO:0083529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SIN4/YNL236W, a subunit of the mediator complex","termid":"PBO:0083529"}


id: PBO:0086927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate kinase; appears to be modulated by phosphorylation; transcription repressed by glucose, and Pyk2p may be active under low glycolytic flux; PYK2 has a paralog, CDC19, that arose from the whole genome duplication","termid":"PBO:0086927"}


id: PBO:0005812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metacaspase Pca1","termid":"PBO:0005812"}


id: GO:1904871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to Cajal body.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:25467444","GOC:BHF_telomere","GOC:nc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"is_a","term_name":"regulation of protein localization to Cajal body","termid":"GO:1904869"},{"relation_name":"positively_regulates","term_name":"protein localization to Cajal body","termid":"GO:1904867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to Cajal body","synonyms":[{"name":"activation of protein localisation in Cajal body","type":"narrow"},{"name":"activation of protein localisation to Cajal body","type":"narrow"},{"name":"activation of protein localization in Cajal body","type":"narrow"},{"name":"activation of protein localization to Cajal body","type":"narrow"},{"name":"positive regulation of protein localisation in Cajal body","type":"exact"},{"name":"positive regulation of protein localisation to Cajal body","type":"exact"},{"name":"positive regulation of protein localization in Cajal body","type":"exact"},{"name":"up regulation of protein localisation in Cajal body","type":"exact"},{"name":"up regulation of protein localisation to Cajal body","type":"exact"},{"name":"up regulation of protein localization in Cajal body","type":"exact"},{"name":"up regulation of protein localization to Cajal body","type":"exact"},{"name":"up-regulation of protein localisation in Cajal body","type":"exact"},{"name":"up-regulation of protein localisation to Cajal body","type":"exact"},{"name":"up-regulation of protein localization in Cajal body","type":"exact"},{"name":"up-regulation of protein localization to Cajal body","type":"exact"},{"name":"upregulation of protein localisation in Cajal body","type":"exact"},{"name":"upregulation of protein localisation to Cajal body","type":"exact"},{"name":"upregulation of protein localization in Cajal body","type":"exact"},{"name":"upregulation of protein localization to Cajal body","type":"exact"}],"termid":"GO:1904871"}


id: PBO:0053049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 7, transcriptional regulator","termid":"PBO:0053049"}


id: GO:0047777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-citramalyl-CoA = acetyl-CoA + pyruvate.","definition_xrefs":["EC:4.1.3.25","RHEA:22612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-citramalyl-CoA lyase activity","secondary_identifiers":["KEGG_REACTION:R00237","MetaCyc:CITRAMALYL-COA-LYASE-RXN"],"synonyms":[{"name":"(+)-CMA-CoA lyase activity","type":"related"},{"name":"(3S)-citramalyl-CoA lyase activity","type":"related"},{"name":"(3S)-citramalyl-CoA pyruvate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-citramalyl-CoA pyruvate-lyase activity","type":"related"},{"name":"citramalyl coenzyme A lyase activity","type":"related"},{"name":"citramalyl-CoA lyase activity","type":"broad"}],"termid":"GO:0047777"}


id: PBO:0063980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 14","termid":"PBO:0063980"}


id: PBO:0066967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 269","termid":"PBO:0066967"}


id: PBO:0031797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G2/M_phase_transition_(obsolete_FYPO:0000404)","termid":"PBO:0031797"}


id: GO:0071651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 5 production","termid":"GO:0071649"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 5 production","termid":"GO:0071609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"positive regulation of CCL5 production","type":"exact"},{"name":"positive regulation of RANTES production","type":"exact"},{"name":"positive regulation of Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071651"}


id: PBO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp2 (predicted)","termid":"PBO:0005362"}


id: SO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature amplification of a region containing a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_amplification","termid":"SO:0001880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_amplification","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:transcript_amplification","type":"exact"},{"name":"transcript amplification","type":"exact"}],"termid":"SO:0001889"}


id: GO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrol + X-SO3(-) = HX + phenanthrylsulfate.","definition_xrefs":["EC:2.8.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenanthrol sulfotransferase activity","synonyms":[{"name":"phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0019111"}


id: PBO:0088140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0088140"}


id: PBO:0058289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4664","termid":"PBO:0058289"}


id: MOD:01622
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to one of several monohydroxylated tryptophan residues, including 3-hydroxy-L-tryptophan and 7'-hydroxy-L-tryptophan.","definition_xrefs":["OMSSA:90","Unimod:35#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated tryptophan","synonyms":[{"name":"Oxidation","type":"related"},{"name":"oxyw","type":"exact"}],"termid":"MOD:01622"}


id: PBO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 1","termid":"PBO:0044590"}


id: PBO:0110390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 59","termid":"PBO:0110390"}


id: PBO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in meiosis Mei2","termid":"PBO:0002558"}


id: GO:0038101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a nodal protein in the extracellular region, and inhibiting nodal signaling by preventing nodal from binding to its cell surface receptor.","definition_xrefs":["PMID:15062104","GOC:signaling","PMID:14570583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"part_of","term_name":"negative regulation of nodal signaling pathway","termid":"GO:1900108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of nodal from receptor via nodal binding","synonyms":[{"name":"binding to and sequestering nodal","type":"exact"},{"name":"extracellular regulation of nodal","type":"broad"},{"name":"nodal antagonist activity","type":"broad"}],"termid":"GO:0038101"}


id: GO:1902371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:22919049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"negatively_regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"negative regulation of tRNA catabolic process","synonyms":[{"name":"down regulation of tRNA breakdown","type":"exact"},{"name":"down regulation of tRNA catabolic process","type":"exact"},{"name":"down regulation of tRNA catabolism","type":"exact"},{"name":"down regulation of tRNA degradation","type":"exact"},{"name":"down-regulation of tRNA breakdown","type":"exact"},{"name":"down-regulation of tRNA catabolic process","type":"exact"},{"name":"down-regulation of tRNA catabolism","type":"exact"},{"name":"down-regulation of tRNA degradation","type":"exact"},{"name":"downregulation of tRNA breakdown","type":"exact"},{"name":"downregulation of tRNA catabolic process","type":"exact"},{"name":"downregulation of tRNA catabolism","type":"exact"},{"name":"downregulation of tRNA degradation","type":"exact"},{"name":"inhibition of tRNA breakdown","type":"narrow"},{"name":"inhibition of tRNA catabolic process","type":"narrow"},{"name":"inhibition of tRNA catabolism","type":"narrow"},{"name":"inhibition of tRNA degradation","type":"narrow"},{"name":"negative regulation of tRNA breakdown","type":"exact"},{"name":"negative regulation of tRNA catabolism","type":"exact"},{"name":"negative regulation of tRNA degradation","type":"exact"}],"termid":"GO:1902371"}


id: GO:0046454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylsilanediol, the smallest member of the dialkylsilanediols. Dimethylsilanediol is the monomer of polydimethylsiloxane, a compound which can be found in a wide range of industrial and consumer products.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dimethylsilanediol metabolic process","synonyms":[{"name":"dimethylsilanediol metabolism","type":"exact"}],"termid":"GO:0046454"}


id: PBO:0078323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA aspartic acid methyltransferase 1","termid":"PBO:0078323"}


id: PBO:0015244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38 (predicted)","termid":"PBO:0015244"}


id: PBO:0082756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; undergoes sumoylation and phosphorylation during mitosis; protein abundance increases in response to DNA replication stress","termid":"PBO:0082756"}


id: GO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont catalytic activity (obsolete GO:0043947)","synonyms":[{"name":"activation by host of symbiont enzyme activity","type":"narrow"},{"name":"activation of symbiont enzyme activity","type":"narrow"},{"name":"positive regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"upregulation by host of symbiont enzyme activity","type":"exact"}],"termid":"GO:0043947"}


id: GO:0030197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions as a lubricant for an extracellular matrix, such as a mucous membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix constituent, lubricant activity","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030197"}


id: GO:0071835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that regulates the union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:elh","GOC:jh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating pheromone secretion","termid":"GO:0071834"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0000747","GO:0008150"],"is_obsolete":false,"name":"mating pheromone secretion involved in regulation of conjugation with cellular fusion","secondary_identifiers":["GO:0071832"],"synonyms":[{"name":"mating pheromone secretion involved in regulation of conjugation","type":"related"},{"name":"mating-type pheromone secretion involved in conjugation","type":"exact"},{"name":"peptide pheromone export involved in regulation of conjugation","type":"broad"}],"termid":"GO:0071835"}


id: PBO:0059641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 7","termid":"PBO:0059641"}


id: FYECO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing non-fermentable carbon sources. Please note that more specific terms exist, such as glycerol and ethanol rich medium that can be used if this is known.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-fermentable carbon sources medium","termid":"FYECO:0000213"}


id: PBO:0072646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor 2","termid":"PBO:0072646"}


id: PBO:0072626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 1","termid":"PBO:0072626"}


id: PBO:0074717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 77B","termid":"PBO:0074717"}


id: PBO:0080943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygote arrest 1 like","termid":"PBO:0080943"}


id: PBO:0069822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1108, pseudogene","termid":"PBO:0069822"}


id: PBO:0043690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I2","termid":"PBO:0043690"}


id: GO:0045016
data:
  {"annotated_genes":["SJAG_02484","SJAG_01639"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103475],"is_not":false,"summary":null,"term":"GO:0045016"},{"annotations":[110785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The process in which a magnesium ion (Mg2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai","PMID:11254124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transmembrane transport","termid":"GO:1903830"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01639":null,"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial magnesium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990614"],"synonyms":[{"name":"mitochondrial magnesium ion transport","type":"related"}],"termid":"GO:0045016","terms_by_termid":{"GO:0045016":null,"GO:1990616":null}}


id: PBO:0091519
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae Hys2","termid":"PBO:0091519"}


id: RO:HOM0000018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is characterized by an interspecies (horizontal) transfer since the common ancestor.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_xenology_relationship_with","synonyms":[{"name":"xenologous to","type":"exact"}],"termid":"RO:HOM0000018"}


id: PBO:0072940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 20","termid":"PBO:0072940"}


id: PBO:0066216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 12","termid":"PBO:0066216"}


id: PBO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf12","termid":"PBO:0004207"}


id: PBO:0081428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 282","termid":"PBO:0081428"}


id: PBO:0063602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 14","termid":"PBO:0063602"}


id: PR:O74648
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoamyl acetate-hydrolyzing esterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14209:SF0","PRO:DNx","OMA:SCHPO04955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate-hydrolyzing esterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.10","secondary_identifiers":["UniProtKB:O74648"],"synonyms":[{"name":"Spom972h-IAH1","type":"exact"}],"termid":"PR:O74648"}


id: GO:0009474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nonaheme cytochrome c (obsolete GO:0009474)","synonyms":[{"name":"nonaheme cytochrome c","type":"exact"}],"termid":"GO:0009474"}


id: PBO:0090777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein Apq12","termid":"PBO:0090777"}


id: PBO:0059825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 5","termid":"PBO:0059825"}


id: PBO:0072448
data:
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